hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/smart.HMMs
Sequence file:            /cdna/full/aisin/as00006/interpro/cnk_1/seq.in
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Query:  as00006  401

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TBC      Domain in Tre-2, BUB2p, and Cdc16p. Probable   214.2    1.2e-59   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TBC        1/1      55   272 ..     1   310 []   214.2  1.2e-59

Alignments of top-scoring domains:
TBC: domain 1 of 1, from 55 to 272: score 214.2, E = 1.2e-59
                   *->vrkGvppslRgeVWklLlnaqpmntsnweraqkakdaesqflvvndd
                      v  G+p+ +R+ +W  L++a+++++                      
     as00006    55    VLAGIPHGMRPQLWMRLSGALQKKRN--------------------- 80   

                   rlkdeYsrllnqtapkdkstdleqavssnnkdfeeqPLsiwnffqdndsl
                    ++  Y+++ +  ++++  +                              
     as00006    81 -SELSYREIVKNSSNDETIAA----------------------------- 100  

                   dqIekDlkRTfpelsfFqfrsrdnqkevllddengpgqesLrrvLkaYsl
                   +qIekDl RT+p + +F +              ++ g+ +LrrvL+a ++
     as00006   101 KQIEKDLLRTMPSNACFAS-------------MGSIGVPRLRRVLRALAW 137  

                   ynpehivgYcQGmnflaapLLlvmpiydEedAFwcfvkLmerylpnflfk
                   + pe  +gYcQG + +aa+LLl++   +EedAFw++++++e+ lp  +f 
     as00006   138 LYPE--IGYCQGTGMVAACLLLFL---EEEDAFWMMSAIIEDLLPASYF- 181  

                   dtnnfytpdlsglqadqlvldslleeylPeLykHLqeqdkqskkkhvdkl
                         + +l g+q dq+vl++l+ +ylP L k Lqe+            
     as00006   182 ------STTLLGVQTDQRVLRHLIVQYLPRLDKLLQEH------------ 213  

                   eidpslyalrWfLtlFarelPledvlRiwDvlfaellrlgseflfkiala
                   +i+ sl +l+WfLt Fa+ +   ++lRiwD++f+e    gs++lf+  l 
     as00006   214 DIELSLITLHWFLTAFASVVDIKLLLRIWDLFFYE----GSRVLFQLTLG 259  

                   iLklnedkllkld<-*
                   +L+l+e++l++     
     as00006   260 MLHLKEEELIQSE    272  

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