hmmpfam - search a single seq against HMM database
HMMER 2.1.1 (Dec 1998)
Copyright (C) 1992-1998 Washington University School of Medicine
HMMER is freely distributed under the GNU General Public License (GPL).
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HMM file:                 /data11/genetics/InterProScan/iprscan/data/Pfam
Sequence file:            /cdna/full/aisin/as00006/interpro/cnk_1/seq.in
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Query:  as00006  401

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
TBC      TBC domain                                     202.9    4.8e-57   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
TBC        1/1      55   271 ..     1   219 []   202.9  4.8e-57

Alignments of top-scoring domains:
TBC: domain 1 of 1, from 55 to 271: score 202.9, E = 4.8e-57
                   *->vkeGvpsstrakVWavcsgAyqlrYAsageYerll..rrgdekesqa
                      v  G p  +r++ W  +sgA q +  s   Y ++++++ +de  ++ 
     as00006    55    VLAGIPHGMRPQLWMRLSGALQKKRNSELSYREIVknSSNDETIAA- 100  

                   vdkIekDvkRtLvkesaFqsrGKGegiskLrrvLvAYswknPdvgYcQGM
                     +IekD+ Rt++ +  F s     g ++LrrvL A  w  P++gYcQG 
     as00006   101 -KQIEKDLLRTMPSNACFASM-GSIGVPRLRRVLRALAWLYPEIGYCQGT 148  

                   NVvaApfLllykSEeqAFyfLdrLlenvvPlKYylpdldGvrlDqkvLds
                     vaA +Ll+   Ee+AF+++  ++e  +P  Y++ +l Gv  Dq+vL  
     as00006   149 GMVAACLLLFL-EEEDAFWMMSAIIEDLLPASYFSTTLLGVQTDQRVLRH 197  

                   fveellprLYeYLlskgvdlkvvsLpwfLsLyattlPleeAlrIfDiLFa
                    +   lprL   L  ++++l+ + L+wfL+ +a        lrI+D++F 
     as00006   198 LIVQYLPRLDKLLQEHDIELSLITLHWFLTAFASVVDIKLLLRIWDLFFY 247  

                   dGivllfrvaLAvLkilkeqiLda<-*
                   +G+ +lf+  L  L    e++++    
     as00006   248 EGSRVLFQLTLGMLHLKEEELIQS    271  

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