# /usr/local/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/as00005.fasta.nr -Q ../query/FLJ00005.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 FLJ00005, 111 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7826180 sequences Expectation_n fit: rho(ln(x))= 5.3848+/-0.000191; mu= 5.0025+/- 0.011 mean_var=86.9938+/-16.576, 0's: 47 Z-trim: 48 B-trim: 57 in 1/65 Lambda= 0.137509 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 36, opt: 24, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|7209311|dbj|BAA92230.1| FLJ00005 protein [Homo ( 111) 752 157.6 3.5e-37 gi|119619700|gb|EAW99294.1| chromosome 15 open rea ( 131) 666 140.6 5.5e-32 gi|119619698|gb|EAW99292.1| chromosome 15 open rea ( 148) 666 140.6 6e-32 gi|119619695|gb|EAW99289.1| chromosome 15 open rea ( 161) 666 140.7 6.3e-32 gi|119619699|gb|EAW99293.1| chromosome 15 open rea ( 197) 666 140.7 7.4e-32 gi|74736248|sp|Q5XKK7.1|CO017_HUMAN RecName: Full= ( 198) 666 140.7 7.4e-32 gi|109085400|ref|XP_001118324.1| PREDICTED: hypoth ( 310) 648 137.3 1.2e-30 gi|149692236|ref|XP_001493813.1| PREDICTED: hypoth ( 198) 508 109.4 2e-22 gi|194038648|ref|XP_001926344.1| PREDICTED: hypoth ( 193) 492 106.2 1.8e-21 gi|76647315|ref|XP_874475.1| PREDICTED: hypothetic ( 191) 471 102.0 3.2e-20 gi|119619696|gb|EAW99290.1| chromosome 15 open rea ( 73) 464 100.3 4.1e-20 gi|26390487|dbj|BAC25905.1| unnamed protein produc ( 128) 452 98.1 3.2e-19 gi|123778598|sp|Q14DQ1.1|CO017_MOUSE RecName: Full ( 197) 452 98.3 4.4e-19 gi|149041790|gb|EDL95631.1| rCG58127 [Rattus norve ( 128) 434 94.5 3.8e-18 gi|74000998|ref|XP_854356.1| PREDICTED: hypothetic ( 168) 348 77.6 6.4e-13 gi|126272494|ref|XP_001379643.1| PREDICTED: simila ( 260) 272 62.7 3.1e-08 gi|149639139|ref|XP_001511942.1| PREDICTED: simila ( 230) 254 59.1 3.3e-07 gi|114658118|ref|XP_510674.2| PREDICTED: similar t ( 203) 206 49.5 0.00022 gi|47220912|emb|CAG03119.1| unnamed protein produc ( 177) 195 47.3 0.00091 >>gi|7209311|dbj|BAA92230.1| FLJ00005 protein [Homo sapi (111 aa) initn: 752 init1: 752 opt: 752 Z-score: 823.7 bits: 157.6 E(): 3.5e-37 Smith-Waterman score: 752; 100.000% identity (100.000% similar) in 111 aa overlap (1-111:1-111) 10 20 30 40 50 60 FLJ000 TAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYMVT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|720 TAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYMVT 10 20 30 40 50 60 70 80 90 100 110 FLJ000 RAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSQQAPPPLCQQL ::::::::::::::::::::::::::::::::::::::::::::::::::: gi|720 RAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSQQAPPPLCQQL 70 80 90 100 110 >>gi|119619700|gb|EAW99294.1| chromosome 15 open reading (131 aa) initn: 666 init1: 666 opt: 666 Z-score: 730.5 bits: 140.6 E(): 5.5e-32 Smith-Waterman score: 666; 100.000% identity (100.000% similar) in 100 aa overlap (1-100:3-102) 10 20 30 40 50 FLJ000 TAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MATAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM 10 20 30 40 50 60 60 70 80 90 100 110 FLJ000 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSQQAPPPLCQQL :::::::::::::::::::::::::::::::::::::::::: gi|119 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSVKFNKGYTALSQSPDENL 70 80 90 100 110 120 gi|119 VSLDSDRAVLF 130 >>gi|119619698|gb|EAW99292.1| chromosome 15 open reading (148 aa) initn: 666 init1: 666 opt: 666 Z-score: 729.8 bits: 140.6 E(): 6e-32 Smith-Waterman score: 666; 100.000% identity (100.000% similar) in 100 aa overlap (1-100:3-102) 10 20 30 40 50 FLJ000 TAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MATAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM 10 20 30 40 50 60 60 70 80 90 100 110 FLJ000 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSQQAPPPLCQQL :::::::::::::::::::::::::::::::::::::::::: gi|119 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSVKFNKGYTALSQSPDENL 70 80 90 100 110 120 gi|119 VSLDSDRPFMYIPGPFSSEQYPFPGWLG 130 140 >>gi|119619695|gb|EAW99289.1| chromosome 15 open reading (161 aa) initn: 666 init1: 666 opt: 666 Z-score: 729.4 bits: 140.7 E(): 6.3e-32 Smith-Waterman score: 666; 100.000% identity (100.000% similar) in 100 aa overlap (1-100:3-102) 10 20 30 40 50 FLJ000 TAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MATAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM 10 20 30 40 50 60 60 70 80 90 100 110 FLJ000 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSQQAPPPLCQQL :::::::::::::::::::::::::::::::::::::::::: gi|119 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSVKFNKGYTALSQSPDENL 70 80 90 100 110 120 gi|119 VSLDSDSDGELGSRYSSGYSSAEASEPGCEPAAASGWVSPG 130 140 150 160 >>gi|119619699|gb|EAW99293.1| chromosome 15 open reading (197 aa) initn: 666 init1: 666 opt: 666 Z-score: 728.2 bits: 140.7 E(): 7.4e-32 Smith-Waterman score: 666; 100.000% identity (100.000% similar) in 100 aa overlap (1-100:3-102) 10 20 30 40 50 FLJ000 TAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 MATAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM 10 20 30 40 50 60 60 70 80 90 100 110 FLJ000 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSQQAPPPLCQQL :::::::::::::::::::::::::::::::::::::::::: gi|119 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSVKFNKGYTALSQSPDENL 70 80 90 100 110 120 gi|119 VSLDSDSDGELGSRYSSGYSSAEVNQDVSRQLLQDGYHLDEIPDDEDLDLIPPKPMASST 130 140 150 160 170 180 >>gi|74736248|sp|Q5XKK7.1|CO017_HUMAN RecName: Full=Unch (198 aa) initn: 666 init1: 666 opt: 666 Z-score: 728.2 bits: 140.7 E(): 7.4e-32 Smith-Waterman score: 666; 100.000% identity (100.000% similar) in 100 aa overlap (1-100:3-102) 10 20 30 40 50 FLJ000 TAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|747 MATAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM 10 20 30 40 50 60 60 70 80 90 100 110 FLJ000 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSQQAPPPLCQQL :::::::::::::::::::::::::::::::::::::::::: gi|747 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSVKFNKGYTALSQSPDENL 70 80 90 100 110 120 gi|747 VSLDSDSDGELGSRYSSGYSSAEQVNQDVSRQLLQDGYHLDEIPDDEDLDLIPPKPMASS 130 140 150 160 170 180 >>gi|109085400|ref|XP_001118324.1| PREDICTED: hypothetic (310 aa) initn: 648 init1: 648 opt: 648 Z-score: 706.3 bits: 137.3 E(): 1.2e-30 Smith-Waterman score: 648; 98.000% identity (99.000% similar) in 100 aa overlap (1-100:116-215) 10 20 30 FLJ000 TAEPSGRALRLSTPGPRPSGARDRAPGAAG ::: ::::.::::::::::::::::::::: gi|109 LKDSPPLPRPSACLPRAGLHHPAGRSPAMATAELSGRAVRLSTPGPRPSGARDRAPGAAG 90 100 110 120 130 140 40 50 60 70 80 90 FLJ000 PPSGQIGNRALRLGERTPAAVEKRGPYMVTRAPSIQAKLQKHRDLAKAVLRRKGMLGASP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PPSGQIGNRALRLGERTPAAVEKRGPYMVTRAPSIQAKLQKHRDLAKAVLRRKGMLGASP 150 160 170 180 190 200 100 110 FLJ000 NRPDSSGKRSQQAPPPLCQQL :::::::::: gi|109 NRPDSSGKRSVKFNKGYTALSQSPDENLVSLDSDSDGELESRYSSGYSSAEVNQDVSRQL 210 220 230 240 250 260 >>gi|149692236|ref|XP_001493813.1| PREDICTED: hypothetic (198 aa) initn: 508 init1: 508 opt: 508 Z-score: 558.8 bits: 109.4 E(): 2e-22 Smith-Waterman score: 508; 79.000% identity (90.000% similar) in 100 aa overlap (1-100:3-102) 10 20 30 40 50 FLJ000 TAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM ::::. .: : :.:. ::.:. :. ::::::::. :. . ::::::::::::::::: gi|149 MATAEPGVHAARASSPAARPGGTPARVAGAAGPPSGRRGSGVPRLGERTPAAVEKRGPYM 10 20 30 40 50 60 60 70 80 90 100 110 FLJ000 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSQQAPPPLCQQL ::::::::::::::::::::::::::::::::.::::::::: gi|149 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPKRPDSSGKRSVKFNKGYTALSQSPDENL 70 80 90 100 110 120 gi|149 VSLDSDSDGELESRYSSGYSSAEQVNQDVSRQLLQDGYHLDEIPDDEDLDLIPPKPMASS 130 140 150 160 170 180 >>gi|194038648|ref|XP_001926344.1| PREDICTED: hypothetic (193 aa) initn: 429 init1: 429 opt: 492 Z-score: 541.8 bits: 106.2 E(): 1.8e-21 Smith-Waterman score: 492; 80.000% identity (87.000% similar) in 100 aa overlap (1-100:3-97) 10 20 30 40 50 FLJ000 TAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM ::::::.:. :. ::::::: :.::::::. : . :::::: :::::::::: gi|194 MATAEPSGHAVLASVLGPRPSGA-----GSAGPPSGRSGIGVPRLGERTLAAVEKRGPYM 10 20 30 40 50 60 70 80 90 100 110 FLJ000 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSQQAPPPLCQQL ::::::::::::::::::::::::::::::.::::::::::: gi|194 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGAAPNRPDSSGKRSVKFNKGYTALSQSPDENL 60 70 80 90 100 110 gi|194 VSLDSDSDGELESRYSSGYSSAEQVNQDVSRQLLQDGYHLDEIPDDEDLDLIPPKPMASS 120 130 140 150 160 170 >>gi|76647315|ref|XP_874475.1| PREDICTED: hypothetical p (191 aa) initn: 422 init1: 422 opt: 471 Z-score: 519.3 bits: 102.0 E(): 3.2e-20 Smith-Waterman score: 471; 77.000% identity (85.000% similar) in 100 aa overlap (1-100:3-96) 10 20 30 40 50 FLJ000 TAEPSGRALRLSTPGPRPSGARDRAPGAAGPPSGQIGNRALRLGERTPAAVEKRGPYM ::.:.:.: : :::::::. :::: :::. : : ::::: ::::::::::: gi|766 MATADPDGHAAP-SIPGPRPSGT-----GAAGLPSGRSGIGAPRLGERIPAAVEKRGPYM 10 20 30 40 50 60 70 80 90 100 110 FLJ000 VTRAPSIQAKLQKHRDLAKAVLRRKGMLGASPNRPDSSGKRSQQAPPPLCQQL :.:::::::::.::::::::::::::::::.::::::::::: gi|766 VARAPSIQAKLKKHRDLAKAVLRRKGMLGAAPNRPDSSGKRSVKFNKGYTALSQSPDENL 60 70 80 90 100 110 gi|766 VSLDSDSDGELESRYSSGYSSAEQVNQDVSRQLLQDGYHLDEIPDDEDLDLIPPKPMTST 120 130 140 150 160 170 111 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (2 proc) start: Fri Feb 27 11:13:44 2009 done: Fri Feb 27 11:17:33 2009 Total Scan time: 526.100 Total Display time: 0.010 Function used was FASTA [version 34.26.5 April 26, 2007]