BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146865.2 - phase: 0
(107 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q7XQN4 OSJNBa0089K21.2 protein [Oryza sativa] 209 1e-53
UniRef100_Q6YY16 Putative small nuclear ribonucleoprotein D1 pol... 206 8e-53
UniRef100_Q9SSF1 Putative small nuclear ribonucleoprotein Sm-D1 ... 204 5e-52
UniRef100_Q9SY09 Small nuclear riboprotein Sm-D1 [Arabidopsis th... 203 9e-52
UniRef100_UPI000013E656 UPI000013E656 UniRef100 entry 159 1e-38
UniRef100_P62314 Small nuclear ribonucleoprotein Sm D1 [Homo sap... 159 1e-38
UniRef100_Q7Z5A3 Small nuclear ribonucleoprotein Sm D1 [Homo sap... 158 3e-38
UniRef100_Q8JHH1 Small nuclear ribonucleoprotein D1 [Brachydanio... 157 4e-38
UniRef100_Q6GLH6 MGC69276 protein [Xenopus tropicalis] 157 4e-38
UniRef100_UPI000001BDE4 UPI000001BDE4 UniRef100 entry 155 3e-37
UniRef100_Q5YET5 Small nuclear ribonucleoprotein Sm-D1 [Chlorara... 154 5e-37
UniRef100_Q7PT70 ENSANGP00000009562 [Anopheles gambiae str. PEST] 154 6e-37
UniRef100_UPI00001D01C9 UPI00001D01C9 UniRef100 entry 149 1e-35
UniRef100_O42661 Probable small nuclear ribonucleoprotein Sm D1 ... 149 2e-35
UniRef100_Q9VU02 Probable small nuclear ribonucleoprotein Sm D1 ... 147 4e-35
UniRef100_UPI00003C1BE5 UPI00003C1BE5 UniRef100 entry 147 8e-35
UniRef100_UPI00002344B7 UPI00002344B7 UniRef100 entry 135 3e-31
UniRef100_Q10013 Probable small nuclear ribonucleoprotein Sm D1 ... 134 4e-31
UniRef100_UPI0000430295 UPI0000430295 UniRef100 entry 133 1e-30
UniRef100_Q620S4 Hypothetical protein CBG02671 [Caenorhabditis b... 132 3e-30
>UniRef100_Q7XQN4 OSJNBa0089K21.2 protein [Oryza sativa]
Length = 114
Score = 209 bits (533), Expect = 1e-53
Identities = 102/107 (95%), Positives = 105/107 (97%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKLNNETV+IELKNGT+VHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY
Sbjct: 8 MKLNNETVTIELKNGTVVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 107
YILPDSLNLETLLVE+ PRVK KKPTAGKPLGRGRGRGRGRGRGRGR
Sbjct: 68 YILPDSLNLETLLVEDTPRVKAKKPTAGKPLGRGRGRGRGRGRGRGR 114
>UniRef100_Q6YY16 Putative small nuclear ribonucleoprotein D1 polypeptide 16kDa;
snRNP core protein D1; Sm-D autoantigen [Oryza sativa]
Length = 114
Score = 206 bits (525), Expect = 8e-53
Identities = 101/107 (94%), Positives = 103/107 (95%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKLNNETV+IELKNGT VHGTITGVDISMNTHLKTVKLTLKGKNPVT DHLSVRGNNIRY
Sbjct: 8 MKLNNETVTIELKNGTTVHGTITGVDISMNTHLKTVKLTLKGKNPVTFDHLSVRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 107
YILPDSLNLETLLVE+ PRVK KKPTAGKPLGRGRGRGRGRGRGRGR
Sbjct: 68 YILPDSLNLETLLVEDTPRVKAKKPTAGKPLGRGRGRGRGRGRGRGR 114
>UniRef100_Q9SSF1 Putative small nuclear ribonucleoprotein Sm-D1 [Arabidopsis
thaliana]
Length = 114
Score = 204 bits (518), Expect = 5e-52
Identities = 97/107 (90%), Positives = 104/107 (96%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKLNNETVSIELKNGT+VHGTITGVD+SMNTHLKTVK++LKGKNPVTLDHLS+RGNNIRY
Sbjct: 8 MKLNNETVSIELKNGTVVHGTITGVDVSMNTHLKTVKMSLKGKNPVTLDHLSLRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 107
YILPDSLNLETLLVE+ PRVKPKKP AGK +GRGRGRGRGRGRGRGR
Sbjct: 68 YILPDSLNLETLLVEDTPRVKPKKPVAGKAVGRGRGRGRGRGRGRGR 114
>UniRef100_Q9SY09 Small nuclear riboprotein Sm-D1 [Arabidopsis thaliana]
Length = 116
Score = 203 bits (516), Expect = 9e-52
Identities = 100/107 (93%), Positives = 103/107 (95%), Gaps = 1/107 (0%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKLNNETVSIELKNGTIVHGTITGVD+SMNTHLK VKLTLKGKNPVTLDHLSVRGNNIRY
Sbjct: 8 MKLNNETVSIELKNGTIVHGTITGVDVSMNTHLKAVKLTLKGKNPVTLDHLSVRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGK-PLGRGRGRGRGRGRGRG 106
YILPDSLNLETLLVE+ PR+KPKKPTAGK P GRGRGRGRGRGRGRG
Sbjct: 68 YILPDSLNLETLLVEDTPRIKPKKPTAGKIPAGRGRGRGRGRGRGRG 114
>UniRef100_UPI000013E656 UPI000013E656 UniRef100 entry
Length = 149
Score = 159 bits (402), Expect = 1e-38
Identities = 79/107 (73%), Positives = 91/107 (84%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKL++ETV+IELKNGT VHGTITGVD+SMNTHLK VK+TLK + PV L+ LS+RGNNIRY
Sbjct: 38 MKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGNNIRY 97
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 107
+ILPDSL L+TLLV+ P+VK KK A GRGRGRGRGRGRGRGR
Sbjct: 98 FILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGR 144
>UniRef100_P62314 Small nuclear ribonucleoprotein Sm D1 [Homo sapiens]
Length = 119
Score = 159 bits (402), Expect = 1e-38
Identities = 79/107 (73%), Positives = 91/107 (84%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKL++ETV+IELKNGT VHGTITGVD+SMNTHLK VK+TLK + PV L+ LS+RGNNIRY
Sbjct: 8 MKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 107
+ILPDSL L+TLLV+ P+VK KK A GRGRGRGRGRGRGRGR
Sbjct: 68 FILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGR 114
>UniRef100_Q7Z5A3 Small nuclear ribonucleoprotein Sm D1 [Homo sapiens]
Length = 119
Score = 158 bits (399), Expect = 3e-38
Identities = 79/107 (73%), Positives = 90/107 (83%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKL++ETV IELKNGT VHGTITGVD+SMNTHLK VK+TLK + PV L+ LS+RGNNIRY
Sbjct: 8 MKLSHETVIIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLETLSIRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 107
+ILPDSL L+TLLV+ P+VK KK A GRGRGRGRGRGRGRGR
Sbjct: 68 FILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGR 114
>UniRef100_Q8JHH1 Small nuclear ribonucleoprotein D1 [Brachydanio rerio]
Length = 119
Score = 157 bits (398), Expect = 4e-38
Identities = 78/107 (72%), Positives = 90/107 (83%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKL++ETV+IELKNGT VHGTITGVD+SMNTHLK VK+TLK + P L+ LS+RGNNIRY
Sbjct: 8 MKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSIRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 107
+ILPDSL L+TLLV+ P+VK KK A GRGRGRGRGRGRGRGR
Sbjct: 68 FILPDSLPLDTLLVDIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGR 114
>UniRef100_Q6GLH6 MGC69276 protein [Xenopus tropicalis]
Length = 119
Score = 157 bits (398), Expect = 4e-38
Identities = 77/107 (71%), Positives = 91/107 (84%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKL++ETV++ELKNGT VHGTITGVD+SMNTHLK VK+T+K + PV L+ LS+RGNNIRY
Sbjct: 8 MKLSHETVTVELKNGTQVHGTITGVDVSMNTHLKAVKMTVKNREPVQLETLSIRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 107
+ILPDSL L+TLLV+ P+VK KK A GRGRGRGRGRGRGRGR
Sbjct: 68 FILPDSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGR 114
>UniRef100_UPI000001BDE4 UPI000001BDE4 UniRef100 entry
Length = 117
Score = 155 bits (391), Expect = 3e-37
Identities = 77/107 (71%), Positives = 89/107 (82%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKL++ETV+IELKNGT VHGTITGVD+SMNTHLK VK+T K + P L+ LS+RGNNIRY
Sbjct: 6 MKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTPKNREPTQLESLSIRGNNIRY 65
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 107
+ILPDSL L+TLLV+ P+VK KK A GRGRGRGRGRGRGRGR
Sbjct: 66 FILPDSLPLDTLLVDIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGR 112
>UniRef100_Q5YET5 Small nuclear ribonucleoprotein Sm-D1 [Chlorarachnion sp.]
Length = 120
Score = 154 bits (389), Expect = 5e-37
Identities = 78/110 (70%), Positives = 91/110 (81%), Gaps = 3/110 (2%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
M+LNNETV++ELKNGT+V GTI+GVD+SMNTHLK VK+TLKGKNPV LD LS+RGNNIRY
Sbjct: 8 MRLNNETVTVELKNGTVVQGTISGVDMSMNTHLKIVKMTLKGKNPVHLDTLSIRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPR--VKPKKPTAGKPLGRGRG-RGRGRGRGRGR 107
+ILPDSLNL+ LLVEE + + G+ GRGRG RGRGRGRGRGR
Sbjct: 68 FILPDSLNLDALLVEEVKKKTTSTRSGRGGRGRGRGRGRRGRGRGRGRGR 117
>UniRef100_Q7PT70 ENSANGP00000009562 [Anopheles gambiae str. PEST]
Length = 126
Score = 154 bits (388), Expect = 6e-37
Identities = 79/118 (66%), Positives = 94/118 (78%), Gaps = 11/118 (9%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKL++ETV+IELKNGT VHGTITGVD++MNTHLK VK+T+K ++PVTLD LS+RGNNIRY
Sbjct: 8 MKLSHETVTIELKNGTQVHGTITGVDVAMNTHLKAVKMTIKNRDPVTLDSLSIRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTA--GKPLGRGRGR---------GRGRGRGRGR 107
YILPDSL LETLL+++AP+ + KK A G P GRGRG GRG GRGRGR
Sbjct: 68 YILPDSLPLETLLIDDAPKTRAKKREANRGGPRGRGRGTRGGRGGPRGGRGGGRGRGR 125
>UniRef100_UPI00001D01C9 UPI00001D01C9 UniRef100 entry
Length = 142
Score = 149 bits (377), Expect = 1e-35
Identities = 74/103 (71%), Positives = 85/103 (81%)
Query: 5 NETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILP 64
+ETV+IELKNGT VHGTI GVD+SMNTHLK VK+ LK + PV L+ LS+RGNNIRY+ILP
Sbjct: 35 HETVTIELKNGTQVHGTIAGVDVSMNTHLKAVKMALKNREPVQLETLSIRGNNIRYFILP 94
Query: 65 DSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 107
DSL L+TLLV+ P+VK KK A GRGRGRGRGRGRGRGR
Sbjct: 95 DSLPLDTLLVDVEPKVKSKKREAVAGRGRGRGRGRGRGRGRGR 137
>UniRef100_O42661 Probable small nuclear ribonucleoprotein Sm D1 [Schizosaccharomyces
pombe]
Length = 117
Score = 149 bits (375), Expect = 2e-35
Identities = 76/108 (70%), Positives = 90/108 (82%), Gaps = 5/108 (4%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKL NETVSIELKNGTIVHGTIT VD+ MNTHLK VK+T+KG+ PV ++ LS+RGNNIRY
Sbjct: 8 MKLTNETVSIELKNGTIVHGTITSVDMQMNTHLKAVKMTVKGREPVPVETLSIRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRG-RGRGR 107
YILPDSL L+TLL++++ + K KK K + RGRGRGRGRG RGRGR
Sbjct: 68 YILPDSLPLDTLLIDDSTKPKQKK----KEVVRGRGRGRGRGTRGRGR 111
>UniRef100_Q9VU02 Probable small nuclear ribonucleoprotein Sm D1 [Drosophila
melanogaster]
Length = 124
Score = 147 bits (372), Expect = 4e-35
Identities = 73/110 (66%), Positives = 94/110 (85%), Gaps = 3/110 (2%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKL++ETV+IELKNGT +HGTITGVD++MNTHLK+V++T+K ++PV L+ LS+RGNNIRY
Sbjct: 8 MKLSHETVTIELKNGTQIHGTITGVDVAMNTHLKSVRMTIKNRDPVHLETLSIRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRG-RGRG--RGRGR 107
+ILPDSL LETLL+++ P+ K KK +G+ RGRGRG RGRG RGRGR
Sbjct: 68 FILPDSLPLETLLIDDTPKSKTKKKDSGRVGNRGRGRGARGRGGPRGRGR 117
>UniRef100_UPI00003C1BE5 UPI00003C1BE5 UniRef100 entry
Length = 192
Score = 147 bits (370), Expect = 8e-35
Identities = 77/118 (65%), Positives = 94/118 (79%), Gaps = 11/118 (9%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKLNNE+V+IELKNGT+VHGT+TGVDI MNTHLKTVK+T++G+ VTLD LS+RGNNIRY
Sbjct: 75 MKLNNESVTIELKNGTVVHGTVTGVDIQMNTHLKTVKMTVRGRPAVTLDTLSIRGNNIRY 134
Query: 61 YILPDSLNLETLLVEEAPRVKPKK--PTA-----GKPLGRGRGRGRG----RGRGRGR 107
+ILPD+L L+ LLV++AP+ K K+ P A G + RGRGRGRG GRGRGR
Sbjct: 135 WILPDALPLDMLLVDDAPKPKGKRKDPVARGARGGASMDRGRGRGRGGGMRGGRGRGR 192
>UniRef100_UPI00002344B7 UPI00002344B7 UniRef100 entry
Length = 121
Score = 135 bits (339), Expect = 3e-31
Identities = 69/112 (61%), Positives = 88/112 (77%), Gaps = 5/112 (4%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MK NETV+IELKNGTI+HGTIT V MNT L+TVK+T KG++P++LD +++RG+ IRY
Sbjct: 8 MKCANETVTIELKNGTILHGTITSVSPQMNTSLRTVKMTPKGRDPISLDTINIRGSTIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVK---PKKPTAGKPLGRG--RGRGRGRGRGRGR 107
YILPDSL L+TLL+++ P+ K K+ G+ GRG RGRGRGRGRGRGR
Sbjct: 68 YILPDSLPLDTLLIDDTPKPKNKARKEADRGRGGGRGGPRGRGRGRGRGRGR 119
>UniRef100_Q10013 Probable small nuclear ribonucleoprotein Sm D1 [Caenorhabditis
elegans]
Length = 126
Score = 134 bits (338), Expect = 4e-31
Identities = 69/109 (63%), Positives = 83/109 (75%), Gaps = 2/109 (1%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKL++ETV+IELKNGT V GTI GVD++MNTHL+ V +T+K K PV LD LS+RGNNIRY
Sbjct: 8 MKLSHETVNIELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKEPVKLDTLSIRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRG--RGRGRGRGRGR 107
ILPD L L+TLL+++ PR K + AG GRGRG RG GRGRGR
Sbjct: 68 IILPDPLALDTLLIDDEPRKKARAARAGASRGRGRGGMRGGRGGRGRGR 116
>UniRef100_UPI0000430295 UPI0000430295 UniRef100 entry
Length = 121
Score = 133 bits (334), Expect = 1e-30
Identities = 68/111 (61%), Positives = 84/111 (75%), Gaps = 4/111 (3%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKN----PVTLDHLSVRGN 56
MKLNNETV+IELKNGT++HGTIT VD MNTHLK+VKLTL+ + P++LD +++RGN
Sbjct: 1 MKLNNETVTIELKNGTVIHGTITSVDPQMNTHLKSVKLTLRSQPSSQPPLSLDSIAIRGN 60
Query: 57 NIRYYILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRGRGRGRGRGRGRGR 107
NIRY+ILPDSL L+TLLV++AP+ K KK A RG RG RG GR
Sbjct: 61 NIRYFILPDSLPLDTLLVDDAPKPKKKKEGAAARGARGAARGARGARGGGR 111
>UniRef100_Q620S4 Hypothetical protein CBG02671 [Caenorhabditis briggsae]
Length = 127
Score = 132 bits (331), Expect = 3e-30
Identities = 68/111 (61%), Positives = 83/111 (74%), Gaps = 5/111 (4%)
Query: 1 MKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRY 60
MKL++ETV+IELKNGT V GTI GVD++MNTHL+ V +T+K K+PV LD LS+RGNNIRY
Sbjct: 8 MKLSHETVNIELKNGTQVSGTIMGVDVAMNTHLRAVSMTVKNKDPVKLDTLSIRGNNIRY 67
Query: 61 YILPDSLNLETLLVEEAPRVKPKKPTAGKPLGRG-----RGRGRGRGRGRG 106
ILPD L L+TLL+++ PR K + AG GRG RGRG GRGRG
Sbjct: 68 IILPDPLALDTLLIDDEPRKKARAARAGASRGRGGRGGMRGRGGRGGRGRG 118
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.315 0.138 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,431,848
Number of Sequences: 2790947
Number of extensions: 7861326
Number of successful extensions: 46667
Number of sequences better than 10.0: 612
Number of HSP's better than 10.0 without gapping: 435
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 42065
Number of HSP's gapped (non-prelim): 2346
length of query: 107
length of database: 848,049,833
effective HSP length: 83
effective length of query: 24
effective length of database: 616,401,232
effective search space: 14793629568
effective search space used: 14793629568
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC146865.2