
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146752.12 + phase: 2 /pseudo
(127 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q84SC4 Hypothetical protein P0577B11.139 [Oryza sativa] 33 1.9
UniRef100_Q95PB1 Hypothetical protein [Ascaris suum] 32 2.5
>UniRef100_Q84SC4 Hypothetical protein P0577B11.139 [Oryza sativa]
Length = 196
Score = 32.7 bits (73), Expect = 1.9
Identities = 20/59 (33%), Positives = 27/59 (44%), Gaps = 1/59 (1%)
Query: 13 GNGVGGCGCGRRNF*RSVGYYFLMFLCSLLRLMFG-SGYRTLPKVTLFVGYMICSQIRS 70
G GG CG F +G+Y L+ LC +L MF G R TL ++C + S
Sbjct: 128 GVTAGGEWCGGGGFWSGLGFYMLLLLCLVLCAMFADEGVRWWIPGTLLAASLLCLNLFS 186
>UniRef100_Q95PB1 Hypothetical protein [Ascaris suum]
Length = 371
Score = 32.3 bits (72), Expect = 2.5
Identities = 20/63 (31%), Positives = 29/63 (45%), Gaps = 3/63 (4%)
Query: 19 CGCGRRNF*RSVGYYFLMFLCSLLRLMFGSGYRTLPKVTLFV---GYMICSQIRSLLRFC 75
C C N+ R + Y LC + +G G+ T+ + LF G+ C SLL +C
Sbjct: 128 CFCSLFNWCRRLFYRSWCRLCRCVSTRWGHGFVTVRVIPLFAVAAGFHCCWSFCSLLNWC 187
Query: 76 RML 78
R L
Sbjct: 188 RRL 190
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.358 0.167 0.583
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,245,449
Number of Sequences: 2790947
Number of extensions: 6380942
Number of successful extensions: 33297
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 33295
Number of HSP's gapped (non-prelim): 4
length of query: 127
length of database: 848,049,833
effective HSP length: 103
effective length of query: 24
effective length of database: 560,582,292
effective search space: 13453975008
effective search space used: 13453975008
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.7 bits)
S2: 67 (30.4 bits)
Medicago: description of AC146752.12