Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC139344.7 + phase: 1 /pseudo
         (478 letters)

Database: uniref100 
           2,790,947 sequences; 848,049,833 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

UniRef100_Q6Z719 Hypothetical protein P0575F10.13 [Oryza sativa]      276  9e-73
UniRef100_Q9C9B8 Hypothetical protein F2P9.16 [Arabidopsis thali...   169  2e-40
UniRef100_Q8IKJ8 Hypothetical protein [Plasmodium falciparum]          36  2.1
UniRef100_UPI000032A68E UPI000032A68E UniRef100 entry                  35  3.6
UniRef100_Q6TM48 Hypothetical protein orf54 [Bacteriophage D3112]      35  3.6
UniRef100_UPI000043740D UPI000043740D UniRef100 entry                  34  8.1
UniRef100_UPI00003055F4 UPI00003055F4 UniRef100 entry                  34  8.1
UniRef100_UPI00002F8790 UPI00002F8790 UniRef100 entry                  34  8.1

>UniRef100_Q6Z719 Hypothetical protein P0575F10.13 [Oryza sativa]
          Length = 749

 Score =  276 bits (706), Expect = 9e-73
 Identities = 158/385 (41%), Positives = 228/385 (59%), Gaps = 31/385 (8%)

Query: 107 RTLRFRNL-----GNDLQDR-VLLQCVTLGMTRTISFSSHSSLFVCLGLSLLTRILPLPR 160
           RT+RF        G  + DR +LLQCV LG+T+    + H S+  C+ ++LL  +LPLP 
Sbjct: 295 RTIRFAAEKAVLEGKHVDDRRLLLQCVALGLTQCGQVTPHESVLRCVCMALLEELLPLPD 354

Query: 161 LYE-SVFELSPSSGGLKVNEIKEHPDNILFKEAGAVTGIFCNLYVLADEENKNIVENLIW 219
           L + SV     +S  +  N +K+H D++LFKEAG V GI CN Y  A ++ K  VE  +W
Sbjct: 355 LLKMSVQCPDGNSPEIVKNRVKQHLDSVLFKEAGPVAGILCNQYSFASDKAKTSVETCVW 414

Query: 220 EYYRDIYFGHRKVVMDLKGKEDELLTNFEKTAESAFLMVVVFALSVTKHKLSSTFAQEIQ 279
           EY + +Y   R  V+  +GK+D+L+T+ EK AE+AFLMVVVF+  VTKH+L++  ++  Q
Sbjct: 415 EYAQVLYCHLRAAVILHQGKQDDLITDIEKIAEAAFLMVVVFSAEVTKHRLNAKSSEGFQ 474

Query: 280 TEISLKILVSLSCVEYFRHVRLPEYMETIRKVTAIVKKNENACTFFVNSIPSYGDLTNGP 339
            ++++KILVS SC+E+ R +RLPEY E +R+   + ++N      F+ SIPSY +LTN  
Sbjct: 475 PDVAVKILVSFSCLEHLRRLRLPEYTEAVRRAVLVNQENAAVAALFIESIPSYAELTNLL 534

Query: 340 D-QKTKYFWSKDEVQTARVLLYLRVIPTLIECLRGPVFGDMVAPTMFLYMEHPNGKVARA 398
               T+Y W  D VQT+R+L YLR+     +C    +           Y++H N KV RA
Sbjct: 535 TLDGTRYIWHGDVVQTSRILFYLRIFDIKKKCPYHKI---------VRYIQHSNEKVTRA 585

Query: 399 SHSVFTAFISMGKESEKIDSLIEGEARFLSLSIIILPNTL----------GMASGVVGMV 448
           SHSV  +F+S G +++  D +   E     L+   +  TL          G+ASGV  + 
Sbjct: 586 SHSVVVSFLSSGNDTDPDDRMALKE----QLAFYYIKRTLEAYPGVTPFEGLASGVAALA 641

Query: 449 RHLPAGSPTTFYCIHSLVEKANQLC 473
           RHLPAGSP T +CIH+LV KA  LC
Sbjct: 642 RHLPAGSPATLFCIHNLVVKAKDLC 666


>UniRef100_Q9C9B8 Hypothetical protein F2P9.16 [Arabidopsis thaliana]
          Length = 699

 Score =  169 bits (428), Expect = 2e-40
 Identities = 109/291 (37%), Positives = 158/291 (53%), Gaps = 43/291 (14%)

Query: 50  ESFKENYAPFVVFMSGIGVLRVTDRYASSTGMKVDVLTRMRTSAIVRVEALVSDLVSRTL 109
           E+ KE YA F VFM+  GV+R +    SS    +++ +++R SA  R+E +   LVS   
Sbjct: 264 ETSKEKYAVFAVFMAAAGVVRASTAGFSSGAQSLEI-SKLRNSAEKRIEFVAQILVSNG- 321

Query: 110 RFRNLGNDLQDRVLLQCVTLGMTRTISFSSHSSLFVCLGLSLLTRILPLPRLYES---VF 166
               L    ++  LL+C  + + R  S SS + L +CL  +LLT++ PL ++YES    F
Sbjct: 322 NVVTLPTTQREGPLLKCFAIALARCGSVSSSAPLLLCLTSALLTQVFPLGQIYESFCNAF 381

Query: 167 ELSPSSGGLKVNEIKEHPDNILFKEAGAVTGIFCNLYVLADEENKNIVENLIWEYYRDIY 226
              P   G ++  ++EH  ++LFKE+GA++G FCN Y  A EENK IVEN+IW++ +++Y
Sbjct: 382 GKEPI--GPRLIWVREHLSDVLFKESGAISGAFCNQYSSASEENKYIVENMIWDFCQNLY 439

Query: 227 FGHRKVVMDLKGKEDELLTNFEKTAESAFLMVVVFALSVTKHKLSSTFAQEIQTEISLKI 286
             HR++ M L G ED LL + EK AES+FLMVVVFAL+VTK  L    ++E + E     
Sbjct: 440 LQHRQIAMLLCGIEDTLLGDIEKIAESSFLMVVVFALAVTKQWLKPIVSKERKME----- 494

Query: 287 LVSLSCVEYFRHVRLPEYMETIRKVTAIVKKNENACTFFVNSIPSYGDLTN 337
                                          N+  C  FV SIP+Y  LTN
Sbjct: 495 -------------------------------NDAPCVSFVESIPAYDSLTN 514



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 33/77 (42%), Positives = 46/77 (58%), Gaps = 6/77 (7%)

Query: 405 AFISMGKESEKIDSLIEGEAR---FLSLSIIILPNTL---GMASGVVGMVRHLPAGSPTT 458
           AF+S  KESE+ +     E     ++  S+ + P      G+ASGV  +V+HLPAGSP  
Sbjct: 517 AFLSSAKESEEDERTQFKEQLVFYYMQRSLEVYPEITPFEGLASGVATLVQHLPAGSPAI 576

Query: 459 FYCIHSLVEKANQLCSE 475
           FY +HSLVEKA+   +E
Sbjct: 577 FYSVHSLVEKASTFSTE 593


>UniRef100_Q8IKJ8 Hypothetical protein [Plasmodium falciparum]
          Length = 1068

 Score = 36.2 bits (82), Expect = 2.1
 Identities = 32/90 (35%), Positives = 46/90 (50%), Gaps = 9/90 (10%)

Query: 175 LKVNEIKEHPD-NILFKEAGAVTGIFCNLYVLADEENKNIVENLIWEYYRDIYFGHRKVV 233
           L+ N IKE  D + L K   +  GI  N++  A E  K I++N  +E      FG     
Sbjct: 375 LRRNNIKEIFDVDDLVKNIKSFLGIKSNIHE-AFENQKLIIKNCNYES-----FGPELCS 428

Query: 234 MDLKGKEDELLTNFEKTAESAFLMVVVFAL 263
           +D K KE  +L  +EK   SAFL +++F L
Sbjct: 429 VDEKAKE--MLWKYEKKKNSAFLFIILFTL 456


>UniRef100_UPI000032A68E UPI000032A68E UniRef100 entry
          Length = 260

 Score = 35.4 bits (80), Expect = 3.6
 Identities = 28/93 (30%), Positives = 48/93 (51%), Gaps = 8/93 (8%)

Query: 176 KVNEIKEHPDNILFKEAGAVTGIFCNLYVLADEENKNIVENLIWEYYRDIYFGHRKVVMD 235
           K+N   +   N++F E    T IF    +   E+ KN+  + IW++Y D    H + + +
Sbjct: 119 KININMDKQSNVIFCE----TSIFGRRAM--SEKIKNLSFSDIWKFYIDNKISHLESI-N 171

Query: 236 LKGKEDELLTN-FEKTAESAFLMVVVFALSVTK 267
           + G+ D+LL N F    +SA   +++F   VTK
Sbjct: 172 IDGETDKLLKNKFTLDKQSAISTILIFGDIVTK 204


>UniRef100_Q6TM48 Hypothetical protein orf54 [Bacteriophage D3112]
          Length = 383

 Score = 35.4 bits (80), Expect = 3.6
 Identities = 24/89 (26%), Positives = 41/89 (45%), Gaps = 12/89 (13%)

Query: 384 MFLYMEHPNGKVARASHSVFTAFISMGKESEKIDSLIEGEARFLSLSIIILPNTLGMASG 443
           + + M  P+G +AR     +TA ++ G  +    S ++G  R+L ++ +     L +A G
Sbjct: 221 LLVAMGRPSGSLARYGVEFYTALVTAGPNATTGSSGLDGTTRYLQMTNV--SRALFIADG 278

Query: 444 ----------VVGMVRHLPAGSPTTFYCI 462
                       G +  +PAG PTT Y I
Sbjct: 279 WSTAVLWVRAETGSLHFMPAGVPTTDYRI 307


>UniRef100_UPI000043740D UPI000043740D UniRef100 entry
          Length = 1285

 Score = 34.3 bits (77), Expect = 8.1
 Identities = 62/330 (18%), Positives = 125/330 (37%), Gaps = 65/330 (19%)

Query: 66   IGVLRVTDRYASSTGMKVDVLTRMRTSAIVRVEALVSDLVSRTLRFRNLGNDLQDRVLLQ 125
            +GV+ +T   +S  G   +V+ +   S + R      D  S+        N ++  +L +
Sbjct: 816  LGVI-ITKNLSSLYGANYNVINQSIKSDMERWSTYPLDFASKI-------NVIKTNILPR 867

Query: 126  CVTLGMTRTISFSSHSSLFVCLGLSLLTRIL---PLPRLYESVFELSPSSGGLKVNEIKE 182
             + L     +    H      +   L++R +     PR+  +  +LS   GG+ +  +K+
Sbjct: 868  LLYLFQALPVEIPKHQ---FTIWNKLISRFIWDGKKPRIRYTTLQLSKQKGGMALPNLKD 924

Query: 183  HPDNILFKEAGAVTGIFCNLYVLADEENKNIVENLIWEYYRDIYFGHRKVVMDLKGKED- 241
            +     F+       ++CN    A  +    +E     Y    + G +++   +K + D 
Sbjct: 925  YFYAAQFRP----LFLWCNNNYFARWKE---IETYTVGYQIQSFLGEKEIPSVVKSQLDS 977

Query: 242  ----------ELLTNFEKTAESAFLMVVVFALSVTKHKLSSTFAQ--------------- 276
                      E    F+ + +   L  + F       +  +TF Q               
Sbjct: 978  ITSGAVEFWFEFARQFKLSKDQKVLRWIAFDTQFKPGESDATFKQWATKGISAICTVLEN 1037

Query: 277  -EIQTEISLKILVSLSCVEYFRHVRLPEY------METIRKVTAIVK------KNENACT 323
             E+QT  +LK  +SL+  + FR ++  +Y      MET  +++ +VK      K+++ C 
Sbjct: 1038 KELQTFQTLKEKLSLTNRDLFRFIQFRDYFYREIKMETSHEISPVVKIMMNAYKSDSKCA 1097

Query: 324  FFVNSIPSYGDLTNGPDQKTKYF---WSKD 350
              ++S   Y  +       T Y    W K+
Sbjct: 1098 KIISSF--YVSIMESKTNSTLYLKSRWEKE 1125


>UniRef100_UPI00003055F4 UPI00003055F4 UniRef100 entry
          Length = 197

 Score = 34.3 bits (77), Expect = 8.1
 Identities = 17/43 (39%), Positives = 25/43 (57%), Gaps = 3/43 (6%)

Query: 174 GLKVNEIKEHPDNILFKEAGAVTGIFCNLYVLADEENKNIVEN 216
           G+K+ E  +   N++FK   A+ G+F  L    DEE K+I EN
Sbjct: 145 GIKLKEFPKLDSNLMFK---AIGGLFTGLIFFGDEEKKSISEN 184


>UniRef100_UPI00002F8790 UPI00002F8790 UniRef100 entry
          Length = 171

 Score = 34.3 bits (77), Expect = 8.1
 Identities = 29/94 (30%), Positives = 41/94 (42%), Gaps = 1/94 (1%)

Query: 253 SAFLMVVVFALSVTKHKLSSTFAQEIQTEISLKILVSLSCVEYFRHVRLPEYMETIRKVT 312
           S +L      L VT   L    A E     SL +L  L CV Y   + LPE+++ + K  
Sbjct: 54  SLYLFGTTLGLLVTSGLLRFGPAFENTAWSSLFLLAPLGCVYYPLSI-LPEWLQILAKGL 112

Query: 313 AIVKKNENACTFFVNSIPSYGDLTNGPDQKTKYF 346
            +V   E A +  VN+I  Y ++ N       YF
Sbjct: 113 PLVYIFEEARSILVNNIVDYKNIMNALALNLFYF 146


  Database: uniref100
    Posted date:  Jan 5, 2005  1:24 AM
  Number of letters in database: 848,049,833
  Number of sequences in database:  2,790,947
  
Lambda     K      H
   0.326    0.140    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 752,066,920
Number of Sequences: 2790947
Number of extensions: 30154228
Number of successful extensions: 93615
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 93603
Number of HSP's gapped (non-prelim): 10
length of query: 478
length of database: 848,049,833
effective HSP length: 131
effective length of query: 347
effective length of database: 482,435,776
effective search space: 167405214272
effective search space used: 167405214272
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 77 (34.3 bits)


Medicago: description of AC139344.7