BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137509.6 - phase: 0 /pseudo
(85 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q84KB0 Pol protein [Cucumis melo] 105 4e-22
UniRef100_O64892 Polyprotein [Ananas comosus] 100 1e-20
UniRef100_Q949K9 Putative polyprotein [Cicer arietinum] 96 3e-19
UniRef100_Q60DH2 Putative polyprotein [Oryza sativa] 95 4e-19
UniRef100_Q5WML8 Putative polyprotein [Oryza sativa] 92 3e-18
UniRef100_Q60DZ9 Putative polyprotein [Oryza sativa] 92 4e-18
UniRef100_Q7XLC0 OSJNBa0011K22.9 protein [Oryza sativa] 92 4e-18
UniRef100_Q7X8C9 OSJNBb0016B03.9 protein [Oryza sativa] 92 4e-18
UniRef100_Q6MWI9 B1159F04.11 protein [Oryza sativa] 92 4e-18
UniRef100_Q65WS7 Putative polyprotein [Oryza sativa] 91 5e-18
UniRef100_Q8SB51 Putative polyprotein [Oryza sativa] 91 5e-18
UniRef100_Q7XXH5 OSJNBa0059H15.14 protein [Oryza sativa] 91 7e-18
UniRef100_Q6MWH2 B1160F02.4 protein [Oryza sativa] 91 7e-18
UniRef100_Q8LNB4 Putative retroelement [Oryza sativa] 91 9e-18
UniRef100_Q5W703 Putative polyprotein [Oryza sativa] 91 9e-18
UniRef100_Q60DH6 Putative polyprotein [Oryza sativa] 91 9e-18
UniRef100_Q5WML9 Putative polyprotein [Oryza sativa] 91 9e-18
UniRef100_Q7XRJ7 OSJNBa0042D13.13 protein [Oryza sativa] 91 9e-18
UniRef100_Q7XQZ1 OSJNBb0045P24.14 protein [Oryza sativa] 91 9e-18
UniRef100_Q7XGE3 Putative retroelement [Oryza sativa] 91 9e-18
>UniRef100_Q84KB0 Pol protein [Cucumis melo]
Length = 923
Score = 105 bits (261), Expect = 4e-22
Identities = 50/80 (62%), Positives = 64/80 (79%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
M +QSRQKSY D RRKD+E++VGD VFL+V PM GV R + K +P FVGPF+++E++
Sbjct: 762 MHTAQSRQKSYADVRRKDLEFEVGDKVFLKVAPMKGVLRFERRGKLSPRFVGPFEILERI 821
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAYR+ALPPSLS +HDVF
Sbjct: 822 GPVAYRLALPPSLSTVHDVF 841
>UniRef100_O64892 Polyprotein [Ananas comosus]
Length = 871
Score = 100 bits (248), Expect = 1e-20
Identities = 44/77 (57%), Positives = 64/77 (82%)
Query: 4 SQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKVGVV 63
+QSRQ+SY D+RR+D+E+QVGDHVFL+V+P G+ R K +P F+GP++++E+VG V
Sbjct: 789 AQSRQRSYADRRRRDLEFQVGDHVFLKVSPTRGIKRFGIRGKLSPRFIGPYEILERVGPV 848
Query: 64 AYRIALPPSLSNLHDVF 80
AYR+ALPP+LS +H+VF
Sbjct: 849 AYRLALPPNLSGVHNVF 865
>UniRef100_Q949K9 Putative polyprotein [Cicer arietinum]
Length = 655
Score = 95.5 bits (236), Expect = 3e-19
Identities = 44/68 (64%), Positives = 54/68 (78%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
MK SQ RQKSY DKRR+ +E++ GDHVFLRV P TGVGRALK +K TP F+GP+ + ++
Sbjct: 588 MKTSQDRQKSYADKRRRLLEFEQGDHVFLRVTPTTGVGRALKSKKLTPKFIGPYQIYARI 647
Query: 61 GVVAYRIA 68
G VAYRIA
Sbjct: 648 GPVAYRIA 655
>UniRef100_Q60DH2 Putative polyprotein [Oryza sativa]
Length = 1196
Score = 95.1 bits (235), Expect = 4e-19
Identities = 41/80 (51%), Positives = 59/80 (73%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
++ +QSRQKSY D RR+D+ ++ GD+V+LRV P+ GV R K PCFVGPF ++ +
Sbjct: 1025 LRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPCFVGPFKIVSRR 1084
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LPPS++ +HDVF
Sbjct: 1085 GEVAYQLELPPSMAGIHDVF 1104
>UniRef100_Q5WML8 Putative polyprotein [Oryza sativa]
Length = 1820
Score = 92.0 bits (227), Expect = 3e-18
Identities = 44/80 (55%), Positives = 57/80 (71%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
+K +QSRQKSY D RR+D+E+ VGD V+LRV P+ GV R K P +VGPF +I +
Sbjct: 1649 LKVAQSRQKSYADNRRRDLEFAVGDFVYLRVTPLRGVHRFQTKGKLAPRYVGPFHIIARR 1708
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LP SL N+HDVF
Sbjct: 1709 GEVAYQLELPASLGNVHDVF 1728
>UniRef100_Q60DZ9 Putative polyprotein [Oryza sativa]
Length = 1721
Score = 91.7 bits (226), Expect = 4e-18
Identities = 44/80 (55%), Positives = 57/80 (71%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
+K +QSRQKSY D RR+D+E+ VGD V+LRV P+ GV R K P +VGPF +I +
Sbjct: 1550 LKVAQSRQKSYADNRRRDLEFAVGDFVYLRVTPLRGVHRFQTKGKLAPRYVGPFRIIARR 1609
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LP SL N+HDVF
Sbjct: 1610 GEVAYQLELPASLGNVHDVF 1629
>UniRef100_Q7XLC0 OSJNBa0011K22.9 protein [Oryza sativa]
Length = 1699
Score = 91.7 bits (226), Expect = 4e-18
Identities = 44/80 (55%), Positives = 57/80 (71%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
+K +QSRQKSY D RR+D+E+ VGD V+LRV P+ GV R K P +VGPF +I +
Sbjct: 1568 LKVAQSRQKSYADNRRRDLEFAVGDFVYLRVTPLRGVHRFQTKGKLAPRYVGPFRIIARR 1627
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LP SL N+HDVF
Sbjct: 1628 GEVAYQLELPASLGNVHDVF 1647
>UniRef100_Q7X8C9 OSJNBb0016B03.9 protein [Oryza sativa]
Length = 1092
Score = 91.7 bits (226), Expect = 4e-18
Identities = 44/80 (55%), Positives = 57/80 (71%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
+K +QSRQKSY D RR+D+E+ VGD V+LRV P+ GV R K P +VGPF +I +
Sbjct: 921 LKVAQSRQKSYADNRRRDLEFAVGDFVYLRVTPLRGVHRFQTKGKLAPRYVGPFRIIARR 980
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LP SL N+HDVF
Sbjct: 981 GEVAYQLELPASLGNVHDVF 1000
>UniRef100_Q6MWI9 B1159F04.11 protein [Oryza sativa]
Length = 1679
Score = 91.7 bits (226), Expect = 4e-18
Identities = 44/80 (55%), Positives = 57/80 (71%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
+K +QSRQKSY D RR+D+E+ VGD V+LRV P+ GV R K P +VGPF +I +
Sbjct: 1548 LKVAQSRQKSYADNRRRDLEFAVGDFVYLRVTPLRGVHRFQTKGKLAPRYVGPFRIIARR 1607
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LP SL N+HDVF
Sbjct: 1608 GEVAYQLELPASLGNVHDVF 1627
>UniRef100_Q65WS7 Putative polyprotein [Oryza sativa]
Length = 1717
Score = 91.3 bits (225), Expect = 5e-18
Identities = 40/80 (50%), Positives = 58/80 (72%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
++ +QSRQKSY D RR+D+ ++ GD+V+LRV P+ GV R K P FVGPF ++ +
Sbjct: 1546 LRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKEKLAPRFVGPFKIVSRR 1605
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LPPS++ +HDVF
Sbjct: 1606 GEVAYQLELPPSMAGIHDVF 1625
>UniRef100_Q8SB51 Putative polyprotein [Oryza sativa]
Length = 1839
Score = 91.3 bits (225), Expect = 5e-18
Identities = 43/80 (53%), Positives = 57/80 (70%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
+K +QSRQKSY + RR+D+E+ VGD V+LRV P+ GV R K P +VGPF +I +
Sbjct: 1668 LKVAQSRQKSYENNRRRDLEFAVGDFVYLRVTPLRGVHRFQTKEKLAPRYVGPFRIIARR 1727
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LP SL N+HDVF
Sbjct: 1728 GEVAYQLELPASLGNVHDVF 1747
>UniRef100_Q7XXH5 OSJNBa0059H15.14 protein [Oryza sativa]
Length = 1030
Score = 90.9 bits (224), Expect = 7e-18
Identities = 43/80 (53%), Positives = 57/80 (70%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
+K +QSRQKSY D RR+D+E+ VGD V+LRV P+ GV R K P +VGPF ++ +
Sbjct: 859 LKVAQSRQKSYADNRRRDLEFAVGDFVYLRVTPLRGVHRFQAKGKLAPRYVGPFRILARR 918
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LP SL N+HDVF
Sbjct: 919 GEVAYQLELPASLGNVHDVF 938
>UniRef100_Q6MWH2 B1160F02.4 protein [Oryza sativa]
Length = 1618
Score = 90.9 bits (224), Expect = 7e-18
Identities = 44/80 (55%), Positives = 57/80 (71%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
+K +QSRQKSY D RR+++E+ V D V+LRV P+ GV R L K P FVGPF +I +
Sbjct: 1447 LKVTQSRQKSYADNRRRNLEFAVHDFVYLRVTPLRGVHRFLTKGKLAPRFVGPFRIIARC 1506
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LP SL N+HDVF
Sbjct: 1507 GEVAYQLELPASLGNVHDVF 1526
>UniRef100_Q8LNB4 Putative retroelement [Oryza sativa]
Length = 518
Score = 90.5 bits (223), Expect = 9e-18
Identities = 40/80 (50%), Positives = 58/80 (72%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
++ +QSRQKSY D RR+D+ ++ GD+V+LRV P+ GV R K P FVGPF ++ +
Sbjct: 347 LRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRR 406
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LPPS++ +HDVF
Sbjct: 407 GEVAYQLELPPSMAGIHDVF 426
>UniRef100_Q5W703 Putative polyprotein [Oryza sativa]
Length = 1568
Score = 90.5 bits (223), Expect = 9e-18
Identities = 40/80 (50%), Positives = 58/80 (72%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
++ +QSRQKSY D RR+D+ ++ GD+V+LRV P+ GV R K P FVGPF ++ +
Sbjct: 1397 LRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRR 1456
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LPPS++ +HDVF
Sbjct: 1457 GEVAYQLELPPSMTGIHDVF 1476
>UniRef100_Q60DH6 Putative polyprotein [Oryza sativa]
Length = 2408
Score = 90.5 bits (223), Expect = 9e-18
Identities = 40/80 (50%), Positives = 58/80 (72%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
++ +QSRQKSY D RR+D+ ++ GD+V+LRV P+ GV R K P FVGPF ++ +
Sbjct: 1245 LRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRR 1304
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LPPS++ +HDVF
Sbjct: 1305 GEVAYQLELPPSMAGIHDVF 1324
>UniRef100_Q5WML9 Putative polyprotein [Oryza sativa]
Length = 1310
Score = 90.5 bits (223), Expect = 9e-18
Identities = 40/80 (50%), Positives = 58/80 (72%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
++ +QSRQKSY D RR+D+ ++ GD+V+LRV P+ GV R K P FVGPF ++ +
Sbjct: 1139 LRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRR 1198
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LPPS++ +HDVF
Sbjct: 1199 GEVAYQLELPPSMAGIHDVF 1218
>UniRef100_Q7XRJ7 OSJNBa0042D13.13 protein [Oryza sativa]
Length = 784
Score = 90.5 bits (223), Expect = 9e-18
Identities = 44/80 (55%), Positives = 56/80 (70%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
+K +QSRQKSY D RR+D+E+ V D V+LRV P+ GV R K P FVGPF +I +
Sbjct: 677 LKVAQSRQKSYADNRRRDLEFAVDDFVYLRVTPLRGVHRFQTKAKLAPRFVGPFRIIARR 736
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LP SL N+HDVF
Sbjct: 737 GEVAYQLELPASLGNVHDVF 756
>UniRef100_Q7XQZ1 OSJNBb0045P24.14 protein [Oryza sativa]
Length = 1195
Score = 90.5 bits (223), Expect = 9e-18
Identities = 40/80 (50%), Positives = 58/80 (72%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
++ +QSRQKSY D RR+D+ ++ GD+V+LRV P+ GV R K P FVGPF ++ +
Sbjct: 1072 LRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRR 1131
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LPPS++ +HDVF
Sbjct: 1132 GEVAYQLELPPSMAGIHDVF 1151
>UniRef100_Q7XGE3 Putative retroelement [Oryza sativa]
Length = 1461
Score = 90.5 bits (223), Expect = 9e-18
Identities = 40/80 (50%), Positives = 58/80 (72%)
Query: 1 MKASQSRQKSYHDKRRKDIEYQVGDHVFLRVNPMTGVGRALKCRKSTPCFVGPFDVIEKV 60
++ +QSRQKSY D RR+D+ ++ GD+V+LRV P+ GV R K P FVGPF ++ +
Sbjct: 1290 LRVAQSRQKSYADNRRRDLAFEEGDYVYLRVTPLRGVHRFQTKGKLAPRFVGPFKIVSRR 1349
Query: 61 GVVAYRIALPPSLSNLHDVF 80
G VAY++ LPPS++ +HDVF
Sbjct: 1350 GEVAYQLELPPSMAGIHDVF 1369
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.324 0.139 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,372,157
Number of Sequences: 2790947
Number of extensions: 4473885
Number of successful extensions: 7900
Number of sequences better than 10.0: 541
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 93
Number of HSP's that attempted gapping in prelim test: 7366
Number of HSP's gapped (non-prelim): 550
length of query: 85
length of database: 848,049,833
effective HSP length: 61
effective length of query: 24
effective length of database: 677,802,066
effective search space: 16267249584
effective search space used: 16267249584
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 68 (30.8 bits)
Medicago: description of AC137509.6