BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136450.2 + phase: 0 /pseudo
(198 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9M1C6 Hypothetical protein T2O9.150 [Arabidopsis thal... 89 8e-17
UniRef100_Q84T51 Putative copia-type pol polyprotein [Oryza sativa] 80 2e-14
UniRef100_Q9FH39 Copia-type polyprotein [Arabidopsis thaliana] 79 9e-14
UniRef100_Q9C7Y1 Copia-type polyprotein, putative; 28768-32772 [... 79 9e-14
UniRef100_Q94H19 Putative gag-pol polyprotein, 3'-partial [Oryza... 79 9e-14
UniRef100_Q7XP45 OSJNBa0063G07.6 protein [Oryza sativa] 77 2e-13
UniRef100_Q948B3 Putative polyprotein [Oryza sativa] 77 2e-13
UniRef100_Q94GR9 Putative gag-pol polyprotein [Oryza sativa] 77 3e-13
UniRef100_Q7XWR8 OSJNBa0091C12.14 protein [Oryza sativa] 77 3e-13
UniRef100_Q60DR2 Putative polyprotein [Oryza sativa] 76 6e-13
UniRef100_Q8H851 Putative Zea mays retrotransposon Opie-2 [Oryza... 75 1e-12
UniRef100_Q7XWL7 OSJNBb0052B05.12 protein [Oryza sativa] 75 1e-12
UniRef100_Q7XR30 OSJNBa0014F04.17 protein [Oryza sativa] 74 2e-12
UniRef100_Q8LMY8 Putative polyprotein [Oryza sativa] 74 2e-12
UniRef100_Q8S5D7 Putative gag-pol polyprotein [Oryza sativa] 74 2e-12
UniRef100_Q851U4 Putative copia-type retrotransposon protein [Or... 74 2e-12
UniRef100_Q7XL83 OSJNBb0014D23.6 protein [Oryza sativa] 74 3e-12
UniRef100_Q8LMZ0 Putative lectin receptor kinase [Oryza sativa] 73 4e-12
UniRef100_Q94H67 Putative gag-pol protein [Oryza sativa] 73 5e-12
UniRef100_Q84VH8 Gag-pol polyprotein [Glycine max] 72 8e-12
>UniRef100_Q9M1C6 Hypothetical protein T2O9.150 [Arabidopsis thaliana]
Length = 1339
Score = 88.6 bits (218), Expect = 8e-17
Identities = 61/186 (32%), Positives = 100/186 (52%), Gaps = 8/186 (4%)
Query: 12 VPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDRRKHTPAQKK 71
+P+F+G + +S NF ELW ++E GI +VV +R A ++
Sbjct: 12 IPRFDGYYDFWSMTMENFLR-----SRELWRLVEEGIPAIVVGTTPVSEAQRS---AVEE 63
Query: 72 LYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQYE 131
K ++ L +AI + + DKST+K+++ S+ Y+GS KV+ A+ L ++E
Sbjct: 64 AKLKDLKVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRKEFE 123
Query: 132 LFKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPKVTAIEETKD 191
L MK+GE I+ R T+V+ ++ + S VSKILRSL ++ V +IEE+ D
Sbjct: 124 LLAMKEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEESND 183
Query: 192 LNTLSV 197
L+TLS+
Sbjct: 184 LSTLSI 189
>UniRef100_Q84T51 Putative copia-type pol polyprotein [Oryza sativa]
Length = 2027
Score = 80.5 bits (197), Expect = 2e-14
Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 12/188 (6%)
Query: 10 GKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDRRKHTPAQ 69
GK P FNG +++ WK H+ S++ +W I+E G + + D +H AQ
Sbjct: 34 GKAPYFNGT--DYAAWKHKMKMHLKSINPSIWRIVEKGYVLQNPENPTKEDDENEHKNAQ 91
Query: 70 KKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQ 129
A++ A+ +E+ ++ D +AK ++ +L +EG+ VRE+K +L Q
Sbjct: 92 AA---------NAILSALSGSEFNRVDDIESAKVIWDTLRNLHEGTDSVRESKVEILKGQ 142
Query: 130 YELFKMKDGESIEQMYSRFHTLVSGLQIL-KKSCVASDHVSKILRSLPARWRPKVTAIEE 188
+E F M DGES MY R +V+ ++ L K V K++R++ R VT I E
Sbjct: 143 FERFIMLDGESPSDMYDRLSKIVNEIKGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIRE 202
Query: 189 TKDLNTLS 196
D TL+
Sbjct: 203 RPDYKTLT 210
>UniRef100_Q9FH39 Copia-type polyprotein [Arabidopsis thaliana]
Length = 1334
Score = 78.6 bits (192), Expect = 9e-14
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 9/186 (4%)
Query: 12 VPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDRRKHTPAQKK 71
+PKF+GD E W N + S +E WDI+E GI E + + T +K
Sbjct: 9 IPKFDGDYEH---WAMLMENLIRS--KEWWDIIETGIPR---PERNVILTGAQRTELAEK 60
Query: 72 LYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQYE 131
K H ++ L +I K + K T+K ++ S+ Y+G+ +V+ A+ L +E
Sbjct: 61 TVKDHK-VKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFE 119
Query: 132 LFKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPKVTAIEETKD 191
+ +MK GE+I +SR + + ++ L + S V KILR+L ++ V AIEE+ +
Sbjct: 120 VLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNN 179
Query: 192 LNTLSV 197
+ L+V
Sbjct: 180 IKELTV 185
>UniRef100_Q9C7Y1 Copia-type polyprotein, putative; 28768-32772 [Arabidopsis
thaliana]
Length = 1334
Score = 78.6 bits (192), Expect = 9e-14
Identities = 56/186 (30%), Positives = 94/186 (50%), Gaps = 9/186 (4%)
Query: 12 VPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDRRKHTPAQKK 71
+PKF+GD E W N + S +E WDI+E GI E + + T +K
Sbjct: 9 IPKFDGDYEH---WAMLMENLIRS--KEWWDIIETGIPR---PERNVILTGAQRTELAEK 60
Query: 72 LYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQYE 131
K H ++ L +I K + K T+K ++ S+ Y+G+ +V+ A+ L +E
Sbjct: 61 TVKDHK-VKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFE 119
Query: 132 LFKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPKVTAIEETKD 191
+ +MK GE+I +SR + + ++ L + S V KILR+L ++ V AIEE+ +
Sbjct: 120 VLEMKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNN 179
Query: 192 LNTLSV 197
+ L+V
Sbjct: 180 IKELTV 185
>UniRef100_Q94H19 Putative gag-pol polyprotein, 3'-partial [Oryza sativa]
Length = 1074
Score = 78.6 bits (192), Expect = 9e-14
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 12/188 (6%)
Query: 10 GKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDRRKHTPAQ 69
GK P FNG +++ WK H+ S++ +W I+E G ++ + D +H AQ
Sbjct: 34 GKAPYFNGT--DYAAWKHKMKMHLKSINPSIWRIVEKGYVLQKPEDPTKEDDENEHKNAQ 91
Query: 70 KKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQ 129
++ A+ +E+ ++ D +AK ++ +L +EG+ VRE+K +L Q
Sbjct: 92 AA---------NVILSALSGSEFNRVDDIESAKVIWDTLRNLHEGTDSVRESKVEILKGQ 142
Query: 130 YELFKMKDGESIEQMYSRFHTLVSGLQIL-KKSCVASDHVSKILRSLPARWRPKVTAIEE 188
+E F M DGES MY +V+ ++ L K V K++R++ R VT I E
Sbjct: 143 FERFVMLDGESPSDMYDHLSKIVNEIKGLGSKDMTDEVVVKKMVRAITLRNSTLVTIIRE 202
Query: 189 TKDLNTLS 196
D TL+
Sbjct: 203 RPDYKTLT 210
>UniRef100_Q7XP45 OSJNBa0063G07.6 protein [Oryza sativa]
Length = 1539
Score = 77.4 bits (189), Expect = 2e-13
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 12/184 (6%)
Query: 3 NNKKSDFGKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDR 62
+N+ + GK P FNG +S WK H+ ++ +W I++ +G + ++D
Sbjct: 2 SNEVNHVGKAPMFNGT--NYSTWKIKMSTHLKAMSFHIWSIVD--VGFAITGTPLTEIDH 57
Query: 63 RKHTPAQKKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAK 122
R + + AL ++ + E+ ++S+ TA ++ L +EG+ + ++AK
Sbjct: 58 RN--------LQLNAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAKIHEGTSEYKDAK 109
Query: 123 ALMLVHQYELFKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPK 182
L QYE F M ES+ MY R + +V+ L+ L + + K+LR+LP ++
Sbjct: 110 LHFLKIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAKKMLRALPEKYETL 169
Query: 183 VTAI 186
VT +
Sbjct: 170 VTML 173
>UniRef100_Q948B3 Putative polyprotein [Oryza sativa]
Length = 1407
Score = 77.4 bits (189), Expect = 2e-13
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 12/188 (6%)
Query: 10 GKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDRRKHTPAQ 69
GK P FNG +++ WK H+ S++ +W I+E G ++ + D +H AQ
Sbjct: 34 GKAPYFNG--MDYAAWKHKMKMHLKSINPSIWRIVEKGYVLQNPEDPTKEDDENEHKNAQ 91
Query: 70 KKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQ 129
A++ A+ +E+ ++ +AK ++ +L +EG VRE+K +L Q
Sbjct: 92 AA---------NAILSALSGSEFNRVDGIESAKVIWDTLRNLHEGMDSVRESKVEILKGQ 142
Query: 130 YELFKMKDGESIEQMYSRFHTLVSGLQIL-KKSCVASDHVSKILRSLPARWRPKVTAIEE 188
+E F M DGES MY R +++ ++ L K V K++R++ R VT I E
Sbjct: 143 FERFVMLDGESPSDMYDRLSKIINEIKGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIHE 202
Query: 189 TKDLNTLS 196
D TL+
Sbjct: 203 RPDYKTLT 210
>UniRef100_Q94GR9 Putative gag-pol polyprotein [Oryza sativa]
Length = 1700
Score = 77.0 bits (188), Expect = 3e-13
Identities = 48/184 (26%), Positives = 90/184 (48%), Gaps = 12/184 (6%)
Query: 3 NNKKSDFGKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDR 62
+N+ + GK P FNG +S WK H+ ++ +W I++ +G + ++D
Sbjct: 2 SNEVNHVGKAPMFNGT--NYSTWKIKMSTHLKAMSFHIWSIVD--VGFAITGTPLTEIDH 57
Query: 63 RKHTPAQKKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAK 122
R + + AL ++ + E+ ++S+ TA ++ L +EG+ + ++AK
Sbjct: 58 RN--------LQLNAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAK 109
Query: 123 ALMLVHQYELFKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPK 182
L QYE F M ES+ MY R + +V+ L+ L + + K+LR+LP ++
Sbjct: 110 LHFLKIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETF 169
Query: 183 VTAI 186
VT +
Sbjct: 170 VTML 173
>UniRef100_Q7XWR8 OSJNBa0091C12.14 protein [Oryza sativa]
Length = 393
Score = 76.6 bits (187), Expect = 3e-13
Identities = 55/187 (29%), Positives = 91/187 (48%), Gaps = 12/187 (6%)
Query: 11 KVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDRRKHTPAQK 70
K P FNG +++ WK H+ S++ +W I+E G ++ + D KH AQ
Sbjct: 35 KAPYFNGT--DYAAWKHKMKMHLKSINPSIWRIVEKGYVLQNPEDPTKEDDENKHKNAQA 92
Query: 71 KLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQY 130
A++ A+ +E+ ++ +AK ++ +L +EG+ VRE+K + Q+
Sbjct: 93 A---------NAILSALSGSEFNRVDGIESAKVIWDTLRNLHEGTDSVRESKVEIFKGQF 143
Query: 131 ELFKMKDGESIEQMYSRFHTLVSGLQIL-KKSCVASDHVSKILRSLPARWRPKVTAIEET 189
E F M DGES MY R +V+ ++ L K V K++R++ R VT I E
Sbjct: 144 ERFVMLDGESPSDMYDRLSKIVNEIKGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIRER 203
Query: 190 KDLNTLS 196
D TL+
Sbjct: 204 PDYKTLT 210
>UniRef100_Q60DR2 Putative polyprotein [Oryza sativa]
Length = 1577
Score = 75.9 bits (185), Expect = 6e-13
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 3 NNKKSDFGKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDR 62
+N+ GK P FNG +S WK H+ ++ +W I++ +G + ++D
Sbjct: 2 SNEVKHEGKAPMFNGT--NYSTWKIKMSTHLKAMSFHIWSIVD--VGFAITGTPLMEIDH 57
Query: 63 RKHTPAQKKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAK 122
R + + AL ++ + E+ ++S+ TA ++ L +EG+ + ++AK
Sbjct: 58 RN--------LQLNAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAK 109
Query: 123 ALMLVHQYELFKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPK 182
L QYE F M ES+ MY R + +V+ L+ L + + K+LR+LP ++
Sbjct: 110 LHFLKIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETL 169
Query: 183 VTAI 186
VT +
Sbjct: 170 VTML 173
>UniRef100_Q8H851 Putative Zea mays retrotransposon Opie-2 [Oryza sativa]
Length = 2011
Score = 75.1 bits (183), Expect = 1e-12
Identities = 47/184 (25%), Positives = 88/184 (47%), Gaps = 12/184 (6%)
Query: 3 NNKKSDFGKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDR 62
+N+ + GK P FNG +S WK H+ ++ +W I++ +G + ++D
Sbjct: 2 SNEVNHVGKAPMFNGT--NYSTWKIKMSTHLKAMSFHIWSIVD--VGFAITGTPLTEIDH 57
Query: 63 RKHTPAQKKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAK 122
R K + L ++ + E+ ++S+ TA ++ L +E + + ++AK
Sbjct: 58 RN--------LKLNAQAMNVLFNSLSQEEFDRVSNLETAYEIWNKLAEIHESTSEYKDAK 109
Query: 123 ALMLVHQYELFKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPK 182
L QYE F M ES+ MY R + +V+ L+ L + + K+LR+LP ++
Sbjct: 110 LHFLKIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTNLEVAQKMLRALPEKYETL 169
Query: 183 VTAI 186
VT +
Sbjct: 170 VTML 173
>UniRef100_Q7XWL7 OSJNBb0052B05.12 protein [Oryza sativa]
Length = 1549
Score = 75.1 bits (183), Expect = 1e-12
Identities = 55/188 (29%), Positives = 92/188 (48%), Gaps = 12/188 (6%)
Query: 10 GKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDRRKHTPAQ 69
GK P FNG +++ WK H+ S++ +W I+E G +E + D +H AQ
Sbjct: 34 GKAPYFNGT--DYAAWKHKMKMHLKSINPLIWRIVEKGYVLQNPEEPTKENDENEHKNAQ 91
Query: 70 KKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQ 129
A++ A+ +E+ ++ +AK ++ +L +EG+ VRE+ +L Q
Sbjct: 92 AA---------NAILSALSGSEFNRVDGIESAKVIWDTLRNLHEGTDSVRESMVEILKGQ 142
Query: 130 YELFKMKDGESIEQMYSRFHTLVSGLQIL-KKSCVASDHVSKILRSLPARWRPKVTAIEE 188
+E F M DGES MY R +V+ ++ L K V K+++++ R VT I E
Sbjct: 143 FERFVMLDGESPSDMYDRLSKIVNEIKGLGSKDMTDEVVVKKMVQAITPRNSTLVTIIRE 202
Query: 189 TKDLNTLS 196
D TL+
Sbjct: 203 RPDYKTLT 210
>UniRef100_Q7XR30 OSJNBa0014F04.17 protein [Oryza sativa]
Length = 491
Score = 74.3 bits (181), Expect = 2e-12
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 12/188 (6%)
Query: 10 GKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDRRKHTPAQ 69
GK FNG ++ WK H+ S++ +W I+E G ++ + D +H AQ
Sbjct: 34 GKASYFNGT--DYVAWKHKMKMHLKSINPSIWRIVEKGYVLQNPEDPTKEDDENEHKNAQ 91
Query: 70 KKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQ 129
A++ A+ ++E+ + +AK ++ +L +EG+ VRE+K +L Q
Sbjct: 92 AA---------NAILSALSESEFNCVDGIESAKVIWDTLQNLHEGTNSVRESKVEILKGQ 142
Query: 130 YELFKMKDGESIEQMYSRFHTLVSGLQIL-KKSCVASDHVSKILRSLPARWRPKVTAIEE 188
+E F M DGES MY R +V+ ++ L K V K++R++ R VT I E
Sbjct: 143 FERFVMLDGESPSDMYDRLSKIVNEIKGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIRE 202
Query: 189 TKDLNTLS 196
D TL+
Sbjct: 203 RPDYKTLT 210
>UniRef100_Q8LMY8 Putative polyprotein [Oryza sativa]
Length = 1584
Score = 74.3 bits (181), Expect = 2e-12
Identities = 48/184 (26%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 3 NNKKSDFGKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDR 62
+N+ + GK P FNG +S WK H+ ++ +W I+ +G + ++D
Sbjct: 2 SNEVNHVGKAPIFNGT--NYSTWKIKMSTHLKAMSFHIWSIVY--VGFAITGTPLTEIDH 57
Query: 63 RKHTPAQKKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAK 122
R + + AL ++ + E+ ++S+ TA ++ L +EG+ + ++AK
Sbjct: 58 RN--------LQLNAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAK 109
Query: 123 ALMLVHQYELFKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPK 182
L QYE F M ES+ MY R + +V+ L+ L + + K+LR+LP ++
Sbjct: 110 LHFLKIQYETFYMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALPEKYETL 169
Query: 183 VTAI 186
VT +
Sbjct: 170 VTML 173
>UniRef100_Q8S5D7 Putative gag-pol polyprotein [Oryza sativa]
Length = 1627
Score = 74.3 bits (181), Expect = 2e-12
Identities = 49/184 (26%), Positives = 89/184 (47%), Gaps = 12/184 (6%)
Query: 3 NNKKSDFGKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDR 62
+N+ + GK P FNG +S WK H+ ++ +W I++ +G + ++D
Sbjct: 2 SNEVNHVGKAPMFNGT--NYSTWKIKMSTHLKAMSFHIWSIVD--VGFAITGTPLTEID- 56
Query: 63 RKHTPAQKKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAK 122
H Q + AL + + E+ ++S+ TA ++ L +EG+ + ++AK
Sbjct: 57 --HCNLQLNAQAMN-----ALFNSFSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAK 109
Query: 123 ALMLVHQYELFKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPK 182
L QYE F M ES+ MY R + +V+ L+ L + + K+LR+LP ++
Sbjct: 110 LHFLKIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGATYTDLEVAQKMLRALPKKYETL 169
Query: 183 VTAI 186
VT +
Sbjct: 170 VTML 173
>UniRef100_Q851U4 Putative copia-type retrotransposon protein [Oryza sativa]
Length = 1183
Score = 73.9 bits (180), Expect = 2e-12
Identities = 46/184 (25%), Positives = 89/184 (48%), Gaps = 12/184 (6%)
Query: 3 NNKKSDFGKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDR 62
+N+ + GK P FNG +S WK H+ ++ +W I++ +G + ++D
Sbjct: 2 SNEVNHVGKAPMFNGT--NYSTWKIKMSTHLKAMSFHIWSIVD--VGFAITGTPLTEIDH 57
Query: 63 RKHTPAQKKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAK 122
R + + AL ++ + E+ ++S+ + ++ L +EG+ + ++AK
Sbjct: 58 RN--------LQLNAQAMNALFNSLSQEEFDRVSNLESTYEIWNKLAEIHEGTSEYKDAK 109
Query: 123 ALMLVHQYELFKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPK 182
L QYE F M ES+ MY R + +V+ L+ L + + K+LR+LP ++
Sbjct: 110 LHFLEIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYNVLEVAQKMLRALPEKYETL 169
Query: 183 VTAI 186
VT +
Sbjct: 170 VTML 173
>UniRef100_Q7XL83 OSJNBb0014D23.6 protein [Oryza sativa]
Length = 1475
Score = 73.6 bits (179), Expect = 3e-12
Identities = 47/184 (25%), Positives = 89/184 (47%), Gaps = 12/184 (6%)
Query: 3 NNKKSDFGKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDR 62
+N+ + GK P FNG +S WK H+ ++ +W I++ +G + ++D
Sbjct: 2 SNEVNHVGKAPMFNGT--NYSTWKIKMSTHLKAMSFYIWSIVD--VGFAITGTPLTEIDH 57
Query: 63 RKHTPAQKKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAK 122
R + + AL ++ + E+ ++S+ TA ++ L +EG+ + ++AK
Sbjct: 58 RN--------LQLNAQAMNALFNSLSQEEFDRVSNLETAYEIWNKLAEIHEGTSEYKDAK 109
Query: 123 ALMLVHQYELFKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPK 182
L QYE F M ES+ MY R + +V+ L+ L + + K+LR+L ++
Sbjct: 110 LHFLKIQYETFSMLPHESVNDMYGRLNVIVNDLKGLGANYTDLEVAQKMLRALSEKYETL 169
Query: 183 VTAI 186
VT +
Sbjct: 170 VTML 173
>UniRef100_Q8LMZ0 Putative lectin receptor kinase [Oryza sativa]
Length = 594
Score = 73.2 bits (178), Expect = 4e-12
Identities = 41/126 (32%), Positives = 70/126 (55%)
Query: 73 YKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQYEL 132
Y+ A+++A+P ++ K TAK + S+ G +VREAKA L +++EL
Sbjct: 109 YQDDRMALSAILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFEL 168
Query: 133 FKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPKVTAIEETKDL 192
+MK+ ES+++ R + +V+ L++L V K LR +P+R+ AIE+ DL
Sbjct: 169 IRMKESESVDEFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLDL 228
Query: 193 NTLSVQ 198
TLS++
Sbjct: 229 KTLSIE 234
Score = 72.4 bits (176), Expect = 6e-12
Identities = 41/126 (32%), Positives = 69/126 (54%)
Query: 73 YKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQYEL 132
Y+ A+++A+P ++ K TAK + S+ G +VREAKA L +++EL
Sbjct: 376 YQDDRMALSAILRAVPPEMLPTLAVKDTAKEAWESVKTMRVGVARVREAKAQTLRNEFEL 435
Query: 133 FKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPKVTAIEETKDL 192
+MK+ ES++ R + +V+ L++L V K LR +P+R+ AIE+ DL
Sbjct: 436 IRMKESESVDDFSMRLNAIVNNLRMLGDPLEEEKVVQKFLRVVPSRFVQVAIAIEQLLDL 495
Query: 193 NTLSVQ 198
TLS++
Sbjct: 496 KTLSIE 501
>UniRef100_Q94H67 Putative gag-pol protein [Oryza sativa]
Length = 2273
Score = 72.8 bits (177), Expect = 5e-12
Identities = 54/188 (28%), Positives = 91/188 (47%), Gaps = 12/188 (6%)
Query: 10 GKVPKFNGDLEEFS*WKTNFYNHVMSLDEELWDILEGGIGDLVVDEEGADVDRRKHTPAQ 69
GK FNG +++ WK H+ ++ +W I+E G ++ + D +H AQ
Sbjct: 34 GKASYFNGT--DYAAWKHKMKMHLKFINPSIWRIVEKGYVLQKPEDPTKEDDENEHKNAQ 91
Query: 70 KKLYKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQ 129
A++ A+ +E+ ++ +AK ++ +L +EG+ VRE+K +L Q
Sbjct: 92 AA---------NAILSALSGSEFNRVDGIESAKVIWDTLRNLHEGTDSVRESKVEILKGQ 142
Query: 130 YELFKMKDGESIEQMYSRFHTLVSGLQIL-KKSCVASDHVSKILRSLPARWRPKVTAIEE 188
+E F M DGES MY R +V+ ++ L K V K++R++ R VT I E
Sbjct: 143 FERFVMLDGESPSDMYDRLSKIVNEIKGLGSKDMTDEVVVKKMVRAITPRNSTLVTIIRE 202
Query: 189 TKDLNTLS 196
D TL+
Sbjct: 203 RLDNKTLT 210
>UniRef100_Q84VH8 Gag-pol polyprotein [Glycine max]
Length = 1576
Score = 72.0 bits (175), Expect = 8e-12
Identities = 51/185 (27%), Positives = 84/185 (44%), Gaps = 5/185 (2%)
Query: 18 DLEEFS*WKTNFYNHVMSLDEELWD-ILEGGIGDLVVDEEGADVDRRKH----TPAQKKL 72
D + WK + SLD W +++G ++D EG D K T + +L
Sbjct: 17 DGSNYEYWKARMVAFLKSLDSRTWKAVIKGWEHPKMLDTEGKPTDELKPEEDWTKEEDEL 76
Query: 73 YKKHHTIRGALVKAIPKAEYMKMSDKSTAKSMFASLCANYEGSKKVREAKALMLVHQYEL 132
+ AL + K + ++ + AK + L +EG+ KV+ ++ +L ++E
Sbjct: 77 ALGNSKALNALFNGVDKNIFRLINTCTVAKDAWEILKITHEGTSKVKMSRLQLLATKFEN 136
Query: 133 FKMKDGESIEQMYSRFHTLVSGLQILKKSCVASDHVSKILRSLPARWRPKVTAIEETKDL 192
KMK+ E I + + + L + V KILRSLP R+ KVTAIEE +D+
Sbjct: 137 LKMKEEECIHDFHMNILEIANACTALGERITDEKLVRKILRSLPKRFDMKVTAIEEAQDI 196
Query: 193 NTLSV 197
+ V
Sbjct: 197 CNMRV 201
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.319 0.134 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 325,378,690
Number of Sequences: 2790947
Number of extensions: 12846400
Number of successful extensions: 44658
Number of sequences better than 10.0: 275
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 44334
Number of HSP's gapped (non-prelim): 301
length of query: 198
length of database: 848,049,833
effective HSP length: 121
effective length of query: 77
effective length of database: 510,345,246
effective search space: 39296583942
effective search space used: 39296583942
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)
Medicago: description of AC136450.2