
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC130803.10 - phase: 0
(289 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q8S9H7 MYB-like transcription factor DIVARICATA [Antir... 101 3e-20
UniRef100_Q8S9H6 MYB-like transcription factor DVL1 [Antirrhinum... 100 8e-20
UniRef100_Q8S900 Syringolide-induced protein 1-3-1A [Glycine max] 100 8e-20
UniRef100_Q5ZBM1 Putative MYB-like transcription factor [Oryza s... 99 2e-19
UniRef100_Q8S8Z9 Syringolide-induced protein 1-3-1B [Glycine max] 99 2e-19
UniRef100_Q9LZ21 Putative I-box binding factor [Arabidopsis thal... 98 2e-19
UniRef100_Q9M9A3 F27J15.20 [Arabidopsis thaliana] 97 6e-19
UniRef100_Q7XKC3 OSJNBa0064G10.8 protein [Oryza sativa] 96 1e-18
UniRef100_Q9FIL9 Similarity to Myb-related transcription factor ... 96 1e-18
UniRef100_Q9FNN6 Similarity to I-box binding factor [Arabidopsis... 94 4e-18
UniRef100_Q66RN1 MYB transcription factor [Hevea brasiliensis] 94 4e-18
UniRef100_Q9SCB4 I-box binding factor [Lycopersicon esculentum] 94 5e-18
UniRef100_Q60EH1 Hypothetical protein B1122D01.8 [Oryza sativa] 93 9e-18
UniRef100_Q9FQF4 Hypothetical protein [Hevea brasiliensis] 92 1e-17
UniRef100_Q9LFB6 Hypothetical protein F7J8_180 [Arabidopsis thal... 92 2e-17
UniRef100_Q8GXN7 Putative MYB family transcription factor [Arabi... 91 3e-17
UniRef100_Q8W0G0 P0529E05.19 protein [Oryza sativa] 91 3e-17
UniRef100_Q9LT00 Similarity to I-box binding factor [Arabidopsis... 91 4e-17
UniRef100_Q8H1D0 Transcription factor MYBS3 [Oryza sativa] 91 4e-17
UniRef100_Q84UB0 Transcription factor Myb1 [Malus xiaojinensis] 91 4e-17
>UniRef100_Q8S9H7 MYB-like transcription factor DIVARICATA [Antirrhinum majus]
Length = 307
Score = 101 bits (251), Expect = 3e-20
Identities = 58/129 (44%), Positives = 77/129 (58%), Gaps = 16/129 (12%)
Query: 91 PEESHAPRKGHWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQN 150
P E + WTE+EHKLFL GLKK+GKG W++IS+ FV+T+TPTQ+ASHAQKYFI Q
Sbjct: 123 PSEQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQL 182
Query: 151 VKDIEKKEKKRKSIHD-TTLNKNDTLVTVAVEQRDEIPSVELQSVIPPQGMQQTQTQQNE 209
K+K+R SIHD TT+N +D ++ PS + + PP + QQ
Sbjct: 183 SGG---KDKRRASIHDITTVNLSD----------NQTPSPDNKK--PPSSPDHSMAQQQT 227
Query: 210 ISPMLCLLP 218
S + LP
Sbjct: 228 SSTSIHKLP 236
>UniRef100_Q8S9H6 MYB-like transcription factor DVL1 [Antirrhinum majus]
Length = 291
Score = 99.8 bits (247), Expect = 8e-20
Identities = 50/86 (58%), Positives = 63/86 (73%), Gaps = 4/86 (4%)
Query: 89 SVPEESHAPRKGHWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIH 148
S P + + WTE+EHKLFL GLKK+GKG W++IS+ FV+T+TPTQ+ASHAQKYFI
Sbjct: 120 SRPSDQERKKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIR 179
Query: 149 QNVKDIEKKEKKRKSIHD-TTLNKND 173
Q K+K+R SIHD TT+N ND
Sbjct: 180 QLSGG---KDKRRASIHDITTVNLND 202
>UniRef100_Q8S900 Syringolide-induced protein 1-3-1A [Glycine max]
Length = 233
Score = 99.8 bits (247), Expect = 8e-20
Identities = 63/154 (40%), Positives = 86/154 (54%), Gaps = 19/154 (12%)
Query: 63 AVAILNSNDNSVETLNSNENNLIQAESVPEESHAPRKGH--WTEDEHKLFLKGLKKHGKG 120
+VA+ S + T + N N + + ++ RK WTE+EH+LFL GL K GKG
Sbjct: 80 SVAMPPSGGAGISTWD-NANQISFGSKLKQQGENERKKGTPWTEEEHRLFLIGLSKFGKG 138
Query: 121 CWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKRKSIHD-TTLNKNDTLVTVA 179
W+ IS+ VVT+TPTQ+ASHAQKYF+ QN KKE+KR SIHD TT++ N + +
Sbjct: 139 DWRSISRNVVVTRTPTQVASHAQKYFLRQN---SVKKERKRSSIHDITTVDSNSAPMPID 195
Query: 180 VEQRDEIPSVELQSVIPPQGMQQTQTQQNEISPM 213
Q+ +PP G Q+QQ S M
Sbjct: 196 ------------QTWVPPPGGSLQQSQQYPSSNM 217
>UniRef100_Q5ZBM1 Putative MYB-like transcription factor [Oryza sativa]
Length = 287
Score = 98.6 bits (244), Expect = 2e-19
Identities = 63/139 (45%), Positives = 77/139 (55%), Gaps = 23/139 (16%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EHKLFL GLKK+GKG W++IS+ FV T+TPTQ+ASHAQKYFI N K+K+R
Sbjct: 135 WTEEEHKLFLLGLKKYGKGDWRNISRNFVQTRTPTQVASHAQKYFIRLNSGG---KDKRR 191
Query: 162 KSIHD-TTLNKNDTLVTVAVEQRDEIPSVELQSVIPPQGMQQTQTQQNEISPMLCLLPIS 220
SIHD TT+N D D PS S+I Q T T + P S
Sbjct: 192 SSIHDITTVNLTD----------DRPPSPSQSSLISNQSNTSTLT--------AAVAPFS 233
Query: 221 STIPSVQQQNELTPVVTAP 239
ST V+ QN +P
Sbjct: 234 ST-ADVKPQNAANASFNSP 251
>UniRef100_Q8S8Z9 Syringolide-induced protein 1-3-1B [Glycine max]
Length = 236
Score = 98.6 bits (244), Expect = 2e-19
Identities = 56/114 (49%), Positives = 70/114 (61%), Gaps = 16/114 (14%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EH+LFL GL K GKG W+ IS+ VVT+TPTQ+ASHAQKYF+ QN KKE+KR
Sbjct: 123 WTEEEHRLFLIGLSKFGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQN---SVKKERKR 179
Query: 162 KSIHD-TTLNKNDTLVTVAVEQRDEIPSVELQSVIPPQGMQQTQTQQNEISPML 214
SIHD TT++ N V + Q+ +PP G Q+ Q S ML
Sbjct: 180 SSIHDITTVDSNSVPVPID------------QNWVPPPGGSVQQSLQYPSSNML 221
>UniRef100_Q9LZ21 Putative I-box binding factor [Arabidopsis thaliana]
Length = 215
Score = 98.2 bits (243), Expect = 2e-19
Identities = 48/76 (63%), Positives = 57/76 (74%), Gaps = 3/76 (3%)
Query: 93 ESHAPRKGHWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVK 152
ES R WTE+EHKLFL GLK++GKG W+ IS+ VVT+TPTQ+ASHAQKYF+ QN
Sbjct: 92 ESERKRGTPWTENEHKLFLIGLKRYGKGDWRSISRNVVVTRTPTQVASHAQKYFLRQN-- 149
Query: 153 DIEKKEKKRKSIHDTT 168
KKE+KR SIHD T
Sbjct: 150 -SVKKERKRSSIHDIT 164
>UniRef100_Q9M9A3 F27J15.20 [Arabidopsis thaliana]
Length = 314
Score = 96.7 bits (239), Expect = 6e-19
Identities = 55/113 (48%), Positives = 71/113 (62%), Gaps = 9/113 (7%)
Query: 98 RKG-HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEK 156
RKG WTE+EH+LFL GL K GKG W+ IS+ FV+++TPTQ+ASHAQKYFI N +
Sbjct: 131 RKGIPWTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMN--- 187
Query: 157 KEKKRKSIHD-TTLNKNDTLVTVAVEQRDEIPSVELQSVIPPQGMQQTQTQQN 208
++++R SIHD TT+N VT +Q P V PQ Q Q QQ+
Sbjct: 188 RDRRRSSIHDITTVNNQAPAVTGGGQQ----PQVVKHRPAQPQPQPQPQPQQH 236
>UniRef100_Q7XKC3 OSJNBa0064G10.8 protein [Oryza sativa]
Length = 318
Score = 95.9 bits (237), Expect = 1e-18
Identities = 47/79 (59%), Positives = 62/79 (77%), Gaps = 5/79 (6%)
Query: 98 RKG-HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEK 156
RKG WTEDEH+LFL GL+K+GKG W+ IS+ FV+++TPTQ+ASHAQKYFI N +
Sbjct: 141 RKGIAWTEDEHRLFLLGLEKYGKGDWRSISRNFVISRTPTQVASHAQKYFIRLNSMN--- 197
Query: 157 KEKKRKSIHD-TTLNKNDT 174
+E++R SIHD T++N DT
Sbjct: 198 RERRRSSIHDITSVNNGDT 216
>UniRef100_Q9FIL9 Similarity to Myb-related transcription factor [Arabidopsis
thaliana]
Length = 288
Score = 95.5 bits (236), Expect = 1e-18
Identities = 58/129 (44%), Positives = 77/129 (58%), Gaps = 14/129 (10%)
Query: 82 NNLIQAESVPEESHAPRKG-HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIAS 140
N QA PE +KG WTE+EHKLFL GLKK+GKG W++IS+ FV+T+TPTQ+AS
Sbjct: 124 NKRSQAGRSPELER--KKGVPWTEEEHKLFLMGLKKYGKGDWRNISRNFVITRTPTQVAS 181
Query: 141 HAQKYFIHQNVKDIEKKEKKRKSIHDTTLNKNDTLVTVAVEQRDEIPSVELQSVIPPQGM 200
HAQKYFI Q K+K+R SIHD T TV +E+ + + + V+ Q
Sbjct: 182 HAQKYFIRQLSGG---KDKRRASIHDIT--------TVNLEEEASLETNKSSIVVGDQRS 230
Query: 201 QQTQTQQNE 209
+ T N+
Sbjct: 231 RLTAFPWNQ 239
>UniRef100_Q9FNN6 Similarity to I-box binding factor [Arabidopsis thaliana]
Length = 298
Score = 94.0 bits (232), Expect = 4e-18
Identities = 46/72 (63%), Positives = 56/72 (76%), Gaps = 4/72 (5%)
Query: 98 RKG-HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEK 156
RKG WTEDEH+LFL GL K+GKG W+ IS+ FVVT+TPTQ+ASHAQKYFI N +
Sbjct: 115 RKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMN--- 171
Query: 157 KEKKRKSIHDTT 168
K+++R SIHD T
Sbjct: 172 KDRRRSSIHDIT 183
>UniRef100_Q66RN1 MYB transcription factor [Hevea brasiliensis]
Length = 310
Score = 94.0 bits (232), Expect = 4e-18
Identities = 45/74 (60%), Positives = 58/74 (77%), Gaps = 4/74 (5%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EH+ FL GL+K+GKG W++IS+ FV T+TPTQ+ASHAQKYFI Q+ K+K+R
Sbjct: 138 WTEEEHRQFLMGLQKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQSTGG---KDKRR 194
Query: 162 KSIHD-TTLNKNDT 174
SIHD TT+N DT
Sbjct: 195 SSIHDITTVNLPDT 208
>UniRef100_Q9SCB4 I-box binding factor [Lycopersicon esculentum]
Length = 191
Score = 93.6 bits (231), Expect = 5e-18
Identities = 44/67 (65%), Positives = 52/67 (76%), Gaps = 3/67 (4%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTEDEH+LFL GL K+GKG W+ IS+ VV++TPTQ+ASHAQKYFI Q KKE+KR
Sbjct: 101 WTEDEHRLFLIGLDKYGKGDWRSISRNVVVSRTPTQVASHAQKYFIRQQAM---KKERKR 157
Query: 162 KSIHDTT 168
SIHD T
Sbjct: 158 SSIHDIT 164
>UniRef100_Q60EH1 Hypothetical protein B1122D01.8 [Oryza sativa]
Length = 315
Score = 92.8 bits (229), Expect = 9e-18
Identities = 45/73 (61%), Positives = 57/73 (77%), Gaps = 4/73 (5%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EHKLFL GLKK+G+G W++IS+ FV ++TPTQ+ASHAQKYFI N K+K+R
Sbjct: 153 WTEEEHKLFLMGLKKYGRGDWRNISRNFVTSRTPTQVASHAQKYFIRLNSGG---KDKRR 209
Query: 162 KSIHD-TTLNKND 173
SIHD TT+N D
Sbjct: 210 SSIHDITTVNLPD 222
>UniRef100_Q9FQF4 Hypothetical protein [Hevea brasiliensis]
Length = 310
Score = 92.4 bits (228), Expect = 1e-17
Identities = 44/74 (59%), Positives = 58/74 (77%), Gaps = 4/74 (5%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EH+ FL GL+K+GKG W++IS+ FV T+TPTQ+ASHAQKYFI Q+ K+++R
Sbjct: 138 WTEEEHRQFLMGLQKYGKGDWRNISRNFVTTRTPTQVASHAQKYFIRQSTGG---KDERR 194
Query: 162 KSIHD-TTLNKNDT 174
SIHD TT+N DT
Sbjct: 195 SSIHDITTVNLPDT 208
>UniRef100_Q9LFB6 Hypothetical protein F7J8_180 [Arabidopsis thaliana]
Length = 267
Score = 92.0 bits (227), Expect = 2e-17
Identities = 45/73 (61%), Positives = 56/73 (76%), Gaps = 4/73 (5%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTEDEH FL GLKK+GKG W++I+K FV T+TPTQ+ASHAQKYF+ Q + K+K+R
Sbjct: 148 WTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLT---DGKDKRR 204
Query: 162 KSIHD-TTLNKND 173
SIHD TT+N D
Sbjct: 205 SSIHDITTVNIPD 217
>UniRef100_Q8GXN7 Putative MYB family transcription factor [Arabidopsis thaliana]
Length = 298
Score = 91.3 bits (225), Expect = 3e-17
Identities = 47/82 (57%), Positives = 61/82 (74%), Gaps = 5/82 (6%)
Query: 95 HAPRKG-HWTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKD 153
H +KG WTE+EH+ FL GLKK+GKG W++I++ FV T+TPTQ+ASHAQKYFI Q
Sbjct: 135 HERKKGVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGG 194
Query: 154 IEKKEKKRKSIHD-TTLNKNDT 174
K+K+R SIHD TT+N D+
Sbjct: 195 ---KDKRRSSIHDITTVNIPDS 213
>UniRef100_Q8W0G0 P0529E05.19 protein [Oryza sativa]
Length = 508
Score = 91.3 bits (225), Expect = 3e-17
Identities = 56/131 (42%), Positives = 80/131 (60%), Gaps = 20/131 (15%)
Query: 102 WTEDEHKLFLKGLKKHGKGCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKR 161
WTE+EHK FL GLKK+G+G W++IS+ FV ++TPTQ+ASHAQKYFI N K+K+R
Sbjct: 139 WTEEEHKSFLMGLKKYGRGDWRNISRYFVTSRTPTQVASHAQKYFIRLNSGG---KDKRR 195
Query: 162 KSIHDTT---LNKNDT---------LVTVAVEQRDEIPSVELQSVIPPQGMQQTQTQQNE 209
SIHD T L + DT ++T A +Q + V+ + V PP + Q++
Sbjct: 196 SSIHDITTVNLPEEDTSNPSPSPPSVLTTASDQLGSL--VDTKPVPPPPSL---GAQRHF 250
Query: 210 ISPMLCLLPIS 220
+SP+ L +S
Sbjct: 251 MSPLPGALGVS 261
>UniRef100_Q9LT00 Similarity to I-box binding factor [Arabidopsis thaliana]
Length = 337
Score = 90.9 bits (224), Expect = 4e-17
Identities = 67/188 (35%), Positives = 100/188 (52%), Gaps = 25/188 (13%)
Query: 70 NDNSVETLNSNENNLIQAESVPEESHAPRKG-HWTEDEHKLFLKGLKKHGKGCWKDISKE 128
ND E+ + ++ L Q R+G W EH+ FL GLKK+GKG W+ IS+
Sbjct: 98 NDRKYESKHKGKSKLKQKR---------RRGVPWKPFEHRQFLHGLKKYGKGDWRSISRH 148
Query: 129 FVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKRKSIHDTTLNKNDTLVTVAVEQRDEIPS 188
VVT+T TQ+ASHAQKYF H N +D K++KR SIHD T+ +N ++ T +QR
Sbjct: 149 CVVTRTSTQVASHAQKYFAHINSED---KKRKRPSIHDITIAENKSIST---KQR----P 198
Query: 189 VELQSVIPPQGMQQTQTQQNEISPMLCL-LPISSTIPSVQQQNELTPVVTAPMEQQ--HE 245
+ Q I G + TQ N+ + L +PI T ++ + T V++ P + ++
Sbjct: 199 ITWQK-INNNGATASNTQANQTTLQPSLDIPIYGTHNNIWNA-QATQVISQPSQNHPTYD 256
Query: 246 TPAILNNK 253
P I N +
Sbjct: 257 APIIWNTQ 264
>UniRef100_Q8H1D0 Transcription factor MYBS3 [Oryza sativa]
Length = 318
Score = 90.9 bits (224), Expect = 4e-17
Identities = 74/259 (28%), Positives = 122/259 (46%), Gaps = 32/259 (12%)
Query: 6 NSYSC------IFGIESMEGRKSIQSSLLQIDLNESASAQDPSEHSMEQQQEKTGTNIDE 59
NS +C IFG+ +G +S+ + L SA+ S + T D
Sbjct: 14 NSRTCPNRGVKIFGVRLTDGSIRKSASMGNLSLLSSAAGSTSGGASPADGPDAAPTAAD- 72
Query: 60 SGHAVAILNSNDNSVETLNSNENNLIQAESVPEESHAPRKGHWTEDEHKLFLKGLKKHGK 119
G+A +D+ V+ +S + + + VP WTE+EH+ FL GL+K GK
Sbjct: 73 -GYA------SDDFVQGFSSATRD--RKKGVP----------WTEEEHRRFLLGLQKLGK 113
Query: 120 GCWKDISKEFVVTKTPTQIASHAQKYFIHQNVKDIEKKEKKRKSIHDTTLNKNDTLVTVA 179
G W+ IS+ FVV++TPTQ+ASHAQKYFI Q+ + K+R S+ D +++ L +
Sbjct: 114 GDWRGISRNFVVSRTPTQVASHAQKYFIRQSNM---TRRKRRSSLFDMVPDESMDLPPLP 170
Query: 180 VEQRDEIPSVELQSVIPPQGMQQTQTQQNEISPMLCLLPISSTIPSVQQQN--ELTPVVT 237
Q E + ++ PP+ ++ + +++ S + S+ +P Q + P
Sbjct: 171 GGQEPETQVLNQPALPPPKEEEEVDSMESDTSAVAESSSASAIMPDNLQSTYPVIVPAYF 230
Query: 238 APMEQQHETPAILNNKDNE 256
+P Q P N KD +
Sbjct: 231 SPF-LQFSVPFWQNQKDED 248
>UniRef100_Q84UB0 Transcription factor Myb1 [Malus xiaojinensis]
Length = 302
Score = 90.9 bits (224), Expect = 4e-17
Identities = 59/192 (30%), Positives = 92/192 (47%), Gaps = 30/192 (15%)
Query: 11 IFGIESMEGRKSIQSSLLQIDLNESASAQDPSEHSMEQQQEKTGTNIDESGHAVAILNSN 70
+FG+ R + S + LN + + P E + T D++ A
Sbjct: 19 LFGV-----RLVVDSMRKSVSLNNLSQYEHPQEAASNNGNNGTAAGKDDAAPGYA----- 68
Query: 71 DNSVETLNSNENNLIQAESVPEESHAPRKGHWTEDEHKLFLKGLKKHGKGCWKDISKEFV 130
+EN+++ E R WTE+EHKLFL GL+K GKG W+ IS+ FV
Sbjct: 69 ---------SENDVVHNSGGNRERERKRGVPWTEEEHKLFLLGLQKAGKGDWRGISRNFV 119
Query: 131 VTKTPTQIASHAQKYFIHQNVKDIEKKEKKRKSIHDTTLNKNDTLVTV-----AVEQRDE 185
T+TPTQ+ASHAQKY++ ++ + + ++R S+ D T DT+ V+ +D
Sbjct: 120 KTRTPTQVASHAQKYYLRRSNLN---RRRRRSSLFDIT---TDTVAPTPMDEEQVQHQDN 173
Query: 186 IPSVELQSVIPP 197
I +L + PP
Sbjct: 174 ISQSQLHPLPPP 185
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.309 0.126 0.345
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 477,348,825
Number of Sequences: 2790947
Number of extensions: 20347737
Number of successful extensions: 79235
Number of sequences better than 10.0: 605
Number of HSP's better than 10.0 without gapping: 233
Number of HSP's successfully gapped in prelim test: 375
Number of HSP's that attempted gapping in prelim test: 78379
Number of HSP's gapped (non-prelim): 1015
length of query: 289
length of database: 848,049,833
effective HSP length: 126
effective length of query: 163
effective length of database: 496,390,511
effective search space: 80911653293
effective search space used: 80911653293
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 74 (33.1 bits)
Medicago: description of AC130803.10