BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124964.9 - phase: 0
(108 letters)
Database: uniref100
2,790,947 sequences; 848,049,833 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef100_Q9LPK9 F24J8.11 protein [Arabidopsis thaliana] 92 3e-18
UniRef100_Q69MT6 Hypothetical protein OSJNBb0034B12.21 [Oryza sa... 65 4e-10
UniRef100_UPI000036B0E8 UPI000036B0E8 UniRef100 entry 44 7e-04
UniRef100_P14652 Homeobox protein Hox-B2 [Homo sapiens] 44 7e-04
UniRef100_Q5VYB1 OTTHUMP00000040732 [Homo sapiens] 42 0.003
UniRef100_Q96T25 Zinc finger protein ZIC 5 [Homo sapiens] 42 0.003
UniRef100_UPI00002C0872 UPI00002C0872 UniRef100 entry 41 0.008
UniRef100_UPI00002ADA16 UPI00002ADA16 UniRef100 entry 41 0.008
UniRef100_Q6N0Q5 Hypothetical protein precursor [Rhodopseudomona... 41 0.008
UniRef100_Q6L4D1 Hypothetical protein OSJNBa0088M05.9 [Oryza sat... 41 0.008
UniRef100_Q9SDC0 Similar to Arabidopsis thaliana chromosome II B... 40 0.010
UniRef100_UPI00004381F5 UPI00004381F5 UniRef100 entry 40 0.013
UniRef100_Q69YA3 Hypothetical protein P0528E04.25 [Oryza sativa] 40 0.013
UniRef100_UPI00003AADD8 UPI00003AADD8 UniRef100 entry 40 0.017
UniRef100_UPI00003AADD7 UPI00003AADD7 UniRef100 entry 40 0.017
UniRef100_Q9VMR2 CG6634-PA [Drosophila melanogaster] 40 0.017
UniRef100_UPI00002350FE UPI00002350FE UniRef100 entry 39 0.022
UniRef100_Q8TB55 MED25 protein [Homo sapiens] 39 0.022
UniRef100_UPI00001CB157 UPI00001CB157 UniRef100 entry 39 0.029
UniRef100_Q8SYY8 RE27439p [Drosophila melanogaster] 39 0.029
>UniRef100_Q9LPK9 F24J8.11 protein [Arabidopsis thaliana]
Length = 126
Score = 92.0 bits (227), Expect = 3e-18
Identities = 50/93 (53%), Positives = 62/93 (65%), Gaps = 12/93 (12%)
Query: 15 RRALMGFSGAVVLGLSWSDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAM 74
R L+G GA+ + + ++ A AAARRPPPPPPKEKKDP ++ QAKVLASKKRKE M
Sbjct: 42 RTILVGLGGALWSWNALAAKEEAMAAARRPPPPPPKEKKDPTVTGVQAKVLASKKRKEEM 101
Query: 75 KAEVARLREQGKAVNINKEPPPPPPVVAAPPAS 107
KA +A+LRE+GK PVV A P+S
Sbjct: 102 KASIAKLREKGK------------PVVEAKPSS 122
>UniRef100_Q69MT6 Hypothetical protein OSJNBb0034B12.21 [Oryza sativa]
Length = 106
Score = 65.1 bits (157), Expect = 4e-10
Identities = 34/56 (60%), Positives = 44/56 (77%), Gaps = 3/56 (5%)
Query: 37 ARAAARRPPPPP---PKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVN 89
A AA++R PP P+E+KDP++S QAKVLASKKRKEAMK VA++RE+GK V+
Sbjct: 50 ASAASKRRAPPAAAAPEERKDPSVSGVQAKVLASKKRKEAMKEFVAKMREKGKPVS 105
>UniRef100_UPI000036B0E8 UPI000036B0E8 UniRef100 entry
Length = 130
Score = 44.3 bits (103), Expect = 7e-04
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 13/64 (20%)
Query: 45 PPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVVAAP 104
PPPPP E+ P+L + + + +K A E G A+ PPPPPP+ AAP
Sbjct: 44 PPPPPFEQTFPSLQPGASTLQRPRSQKRA---------EDGPAL----PPPPPPPLPAAP 90
Query: 105 PASE 108
PA E
Sbjct: 91 PAPE 94
>UniRef100_P14652 Homeobox protein Hox-B2 [Homo sapiens]
Length = 356
Score = 44.3 bits (103), Expect = 7e-04
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 13/64 (20%)
Query: 45 PPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVVAAP 104
PPPPP E+ P+L + + + +K A E G A+ PPPPPP+ AAP
Sbjct: 44 PPPPPFEQTFPSLQPGASTLQRPRSQKRA---------EDGPAL----PPPPPPPLPAAP 90
Query: 105 PASE 108
PA E
Sbjct: 91 PAPE 94
>UniRef100_Q5VYB1 OTTHUMP00000040732 [Homo sapiens]
Length = 663
Score = 42.4 bits (98), Expect = 0.003
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 19/119 (15%)
Query: 4 DALVGVVINLARRALMGFSGAVVLGLSWSDEQSARAAARRP----------PPPPPK--- 50
DA G V A AL G+ GAV L L+ + +A AA P PPPPP
Sbjct: 310 DAHYGAVAAAAAAALHGY-GAVNLNLNLAAAAAAAAAGPGPHLQHHAPPPAPPPPPAPAQ 368
Query: 51 --EKKDPNLSAAQAKVLASKKRKEAMKAE-VARLREQGKAVNINKEPPPPPPVVAAPPA 106
+ P+L A L + ++ +K E + + + + + PPPPPP PPA
Sbjct: 369 HPHQHHPHLPGAAGAFL--RYMRQPIKQELICKWIDPDELAGLPPPPPPPPPPPPPPPA 425
>UniRef100_Q96T25 Zinc finger protein ZIC 5 [Homo sapiens]
Length = 639
Score = 42.4 bits (98), Expect = 0.003
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 19/119 (15%)
Query: 4 DALVGVVINLARRALMGFSGAVVLGLSWSDEQSARAAARRP----------PPPPPK--- 50
DA G V A AL G+ GAV L L+ + +A AA P PPPPP
Sbjct: 286 DAHYGAVAAAAAAALHGY-GAVNLNLNLAAAAAAAAAGPGPHLQHHAPPPAPPPPPAPAQ 344
Query: 51 --EKKDPNLSAAQAKVLASKKRKEAMKAE-VARLREQGKAVNINKEPPPPPPVVAAPPA 106
+ P+L A L + ++ +K E + + + + + PPPPPP PPA
Sbjct: 345 HPHQHHPHLPGAAGAFL--RYMRQPIKQELICKWIDPDELAGLPPPPPPPPPPPPPPPA 401
>UniRef100_UPI00002C0872 UPI00002C0872 UniRef100 entry
Length = 301
Score = 40.8 bits (94), Expect = 0.008
Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 5/79 (6%)
Query: 30 SWSDEQSARAAARRPP---PPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGK 86
S + E ARA A PP PPPP + P A + ++K+ EA+ E K
Sbjct: 138 SGTRESPARAKAPPPPTKAPPPPMKAPPPPPKARPSPAKPARKQPEAVPGWNKPSSEWKK 197
Query: 87 AVNIN--KEPPPPPPVVAA 103
N+ K PPPPPP A
Sbjct: 198 KKNVEQPKAPPPPPPPAQA 216
>UniRef100_UPI00002ADA16 UPI00002ADA16 UniRef100 entry
Length = 183
Score = 40.8 bits (94), Expect = 0.008
Identities = 25/82 (30%), Positives = 42/82 (50%), Gaps = 12/82 (14%)
Query: 26 VLGLSWSDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQG 85
+L L +AR + PPPPPP E + + A++ + S++R+ R RE+
Sbjct: 63 LLALQGMGPSTARKLSAMPPPPPPPEVRGGSFGASERQ--RSRERQ--------RTRERQ 112
Query: 86 KAVNINKEPPPPP--PVVAAPP 105
++++ PPPPP P+ A P
Sbjct: 113 RSLDAPPPPPPPPELPMATAVP 134
>UniRef100_Q6N0Q5 Hypothetical protein precursor [Rhodopseudomonas palustris]
Length = 225
Score = 40.8 bits (94), Expect = 0.008
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 26 VLGLSWSDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQG 85
+LG+ + A A RPPPPPP +P L K+L K ++ + L G
Sbjct: 29 LLGIPALAQNYAPPPADRPPPPPPARTDNPGLVDEIQKLL---KTPSSLLPSTSLLPSFG 85
Query: 86 KAVNINKEPPPPPPVVAAPPASE 108
+ +K+ PPPPP PP +
Sbjct: 86 ---SDSKDAPPPPPPTPPPPPQQ 105
>UniRef100_Q6L4D1 Hypothetical protein OSJNBa0088M05.9 [Oryza sativa]
Length = 301
Score = 40.8 bits (94), Expect = 0.008
Identities = 22/69 (31%), Positives = 33/69 (46%), Gaps = 20/69 (28%)
Query: 39 AAARRPPPPPPKEKKDPN--LSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPP 96
+++ PPPPPP E+ +P ++ A A+ A KK +++ PPP
Sbjct: 53 SSSSSPPPPPPPEEAEPKDPIALAFARAAAYKKERDS------------------PPPPP 94
Query: 97 PPPVVAAPP 105
PPP A PP
Sbjct: 95 PPPTPAPPP 103
Score = 40.8 bits (94), Expect = 0.008
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 22/71 (30%)
Query: 37 ARAAARRPPPPPPK--EKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEP 94
A +++ PPPPPP+ E KDP ++ A A+ A KK +++ P
Sbjct: 52 ASSSSSPPPPPPPEEAEPKDP-IALAFARAAAYKKERDS-------------------PP 91
Query: 95 PPPPPVVAAPP 105
PPPPP APP
Sbjct: 92 PPPPPPTPAPP 102
>UniRef100_Q9SDC0 Similar to Arabidopsis thaliana chromosome II BAC F7D8 genomic
sequence [Oryza sativa]
Length = 588
Score = 40.4 bits (93), Expect = 0.010
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 39 AAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPP 98
A RRPPPPPP + P SAA + +R +A + A L G A + P P
Sbjct: 251 APTRRPPPPPPPPPRCPGGSAADRHMTQPPRRPDATETTTAFL---GAASTPSPRPAPAT 307
Query: 99 PVVAAP 104
P+ AP
Sbjct: 308 PLPDAP 313
>UniRef100_UPI00004381F5 UPI00004381F5 UniRef100 entry
Length = 1497
Score = 40.0 bits (92), Expect = 0.013
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 45 PPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQG-KAVNINKEPPPPPPVVAA 103
PPPP +K P S + A + + + + + ++NK PPPPPP +A
Sbjct: 1195 PPPPDDQKASPPCSTSAASLSVISHSSATLANDPSSSSSSSVSSSSVNKPPPPPPPPPSA 1254
Query: 104 PP 105
PP
Sbjct: 1255 PP 1256
>UniRef100_Q69YA3 Hypothetical protein P0528E04.25 [Oryza sativa]
Length = 672
Score = 40.0 bits (92), Expect = 0.013
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 29 LSWSDEQSARAAARRPPPP--PPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGK 86
LS S+ + R A +P PP P KE + P+ +AA + R A+ + L+E
Sbjct: 163 LSSSNPDARRRAPPQPEPPSTPRKENRVPSAAAASTAAATATPRLRALSRSRSSLKESAS 222
Query: 87 AVNINKEPPPPPP 99
+V + PPPP
Sbjct: 223 SVRDSPRRAPPPP 235
>UniRef100_UPI00003AADD8 UPI00003AADD8 UniRef100 entry
Length = 1012
Score = 39.7 bits (91), Expect = 0.017
Identities = 25/62 (40%), Positives = 28/62 (44%), Gaps = 5/62 (8%)
Query: 44 PPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVVAA 103
PPPPPP + DP A+A+ A K V L V PPPPPPV A
Sbjct: 558 PPPPPPLQFHDPQPVPAKAEA-PKASTSPAPKPLVGHLHP----VPPPPPPPPPPPVPCA 612
Query: 104 PP 105
PP
Sbjct: 613 PP 614
>UniRef100_UPI00003AADD7 UPI00003AADD7 UniRef100 entry
Length = 978
Score = 39.7 bits (91), Expect = 0.017
Identities = 25/62 (40%), Positives = 28/62 (44%), Gaps = 5/62 (8%)
Query: 44 PPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVVAA 103
PPPPPP + DP A+A+ A K V L V PPPPPPV A
Sbjct: 440 PPPPPPLQFHDPQPVPAKAEA-PKASTSPAPKPLVGHLHP----VPPPPPPPPPPPVPCA 494
Query: 104 PP 105
PP
Sbjct: 495 PP 496
>UniRef100_Q9VMR2 CG6634-PA [Drosophila melanogaster]
Length = 580
Score = 39.7 bits (91), Expect = 0.017
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 14 ARRALMGFSG-AVVLGLSWSDEQSARAAARRPPPPPPK-------EKKDPNLSAAQAKVL 65
AR+ L F G + L A AAA PPPPPP +++ P L+A L
Sbjct: 432 ARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQLTAG---FL 488
Query: 66 ASKKRKEAMKAEVARLREQGKA----VNINKEPPPPPPVVAAPPAS 107
AS ++ A A+ + Q +A + N+ PPPPP A+ P+S
Sbjct: 489 ASANQQAAAAQAAAQAQAQAQAAAAAMAANRTPPPPP--TASTPSS 532
>UniRef100_UPI00002350FE UPI00002350FE UniRef100 entry
Length = 455
Score = 39.3 bits (90), Expect = 0.022
Identities = 25/71 (35%), Positives = 29/71 (40%)
Query: 37 ARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPP 96
A AA R PPPPP + P +A A A A A G + PPP
Sbjct: 271 AAAAPRPPPPPPTRPTPPPPPPSATAPPSLPNGASPASLAVQAARNALGHSSQTPSIPPP 330
Query: 97 PPPVVAAPPAS 107
PPP+ AA S
Sbjct: 331 PPPLPAASAPS 341
Score = 36.6 bits (83), Expect = 0.14
Identities = 27/83 (32%), Positives = 36/83 (42%), Gaps = 14/83 (16%)
Query: 39 AAARRPPPPPPKEKKDPNL--SAAQAKVLASKKRKEAMKAEVAR--LREQGKAVNINKEP 94
AAA RPPPPPP P SA L + ++ + AR L + +I P
Sbjct: 272 AAAPRPPPPPPTRPTPPPPPPSATAPPSLPNGASPASLAVQAARNALGHSSQTPSIPPPP 331
Query: 95 PP----------PPPVVAAPPAS 107
PP PPP +APP++
Sbjct: 332 PPLPAASAPSAPPPPPPSAPPSA 354
>UniRef100_Q8TB55 MED25 protein [Homo sapiens]
Length = 576
Score = 39.3 bits (90), Expect = 0.022
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 39 AAARRP-PPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPP 97
AA ++P PP PP+ + NLSAAQ +A++ EA K + A L + + PP P
Sbjct: 105 AAPQQPLPPVPPQYQVPGNLSAAQ---VAAQNAVEAAKNQKAGLGPRFSQAPAPQLPPGP 161
Query: 98 PPVVAAPPASE 108
P PPAS+
Sbjct: 162 PGAPKPPPASQ 172
>UniRef100_UPI00001CB157 UPI00001CB157 UniRef100 entry
Length = 151
Score = 38.9 bits (89), Expect = 0.029
Identities = 27/62 (43%), Positives = 36/62 (57%), Gaps = 8/62 (12%)
Query: 31 WSDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEV----ARLREQGK 86
WS E + R PP PPK KKD +L A Q K+ A++KR+++ +AEV A RE K
Sbjct: 27 WSKESVPES---RTPPRPPK-KKDLSLEAIQKKLEAAEKRRKSHEAEVLKQLAEKREHEK 82
Query: 87 AV 88
V
Sbjct: 83 EV 84
>UniRef100_Q8SYY8 RE27439p [Drosophila melanogaster]
Length = 571
Score = 38.9 bits (89), Expect = 0.029
Identities = 32/102 (31%), Positives = 46/102 (44%), Gaps = 9/102 (8%)
Query: 14 ARRALMGFSG-AVVLGLSWSDEQSARAAARRPPPPPPK-------EKKDPNLSAAQAKVL 65
AR+ L F G + L A AAA PPPPPP +++ P L+A
Sbjct: 432 ARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQLTAGFL-AS 490
Query: 66 ASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVVAAPPAS 107
A+++ A A A+ + Q A + PPPP A+ P+S
Sbjct: 491 ANQQAAAAQAAAQAQAQTQAAAAAMAANRTPPPPPTASTPSS 532
Database: uniref100
Posted date: Jan 5, 2005 1:24 AM
Number of letters in database: 848,049,833
Number of sequences in database: 2,790,947
Lambda K H
0.311 0.128 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 207,736,020
Number of Sequences: 2790947
Number of extensions: 7990926
Number of successful extensions: 145571
Number of sequences better than 10.0: 1198
Number of HSP's better than 10.0 without gapping: 212
Number of HSP's successfully gapped in prelim test: 1026
Number of HSP's that attempted gapping in prelim test: 134164
Number of HSP's gapped (non-prelim): 6103
length of query: 108
length of database: 848,049,833
effective HSP length: 84
effective length of query: 24
effective length of database: 613,610,285
effective search space: 14726646840
effective search space used: 14726646840
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC124964.9