BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149495.11 - phase: 0
(421 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UFO1_YEAST (Q04511) Ubiquitin ligase complex F-box protein UFO1 33 1.8
SYA_PROMP (Q7V3N0) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine-... 31 5.2
Y185_MYCGE (P47431) Hypothetical lipoprotein MG185 precursor 31 6.8
CG2F_HUMAN (P41002) G2/mitotic-specific cyclin F 31 6.8
Y939_SULTO (Q973G3) Hypothetical protein ST0939 precursor 30 8.9
NU5C_TECST (Q9TLC2) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_MUTAC (Q32551) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_LACSA (Q32539) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_HELAN (Q32384) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_GERJA (P51100) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_FLARA (Q32238) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_DAMDI (Q32126) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_CICIN (Q32007) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_CARTI (Q32091) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_ATRJA (P51099) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_ATHGR (P51098) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_ASTCO (P51097) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_ANIIN (P51096) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_AMBTR (Q31849) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
NU5C_ADEHI (P51095) NAD(P)H-quinone oxidoreductase chain 5, chlo... 30 8.9
>UFO1_YEAST (Q04511) Ubiquitin ligase complex F-box protein UFO1
Length = 668
Score = 32.7 bits (73), Expect = 1.8
Identities = 19/51 (37%), Positives = 25/51 (48%)
Query: 11 VASDLPPDILAEIFSCLPVKSLLRFRSTSKSLRSLIDSHKFINLHLKSSLN 61
V DLPP+IL IFS L K L + S R+LI + KS ++
Sbjct: 7 VLQDLPPEILINIFSHLDEKDLFTLQELSTHFRNLIHDEELWKNLFKSRVH 57
>SYA_PROMP (Q7V3N0) Alanyl-tRNA synthetase (EC 6.1.1.7)
(Alanine--tRNA ligase) (AlaRS)
Length = 886
Score = 31.2 bits (69), Expect = 5.2
Identities = 24/97 (24%), Positives = 40/97 (40%), Gaps = 1/97 (1%)
Query: 79 NLTKSIIPLNHPFTTNIDPFTLNSIKALIGSCNGLLAIYNGPIAFTHPNDATEITIWNTN 138
+L ++ NH T + + +G L+A F T+ I+
Sbjct: 554 DLARAKAAANHTATHLLQSALKVVVNESVGQKGSLVAFNKLRFDFNSSKPITKDQIFKVE 613
Query: 139 TRKH-WIIPFLPLPIPNIVESENIERGGVCIHGFGFD 174
T + WI+ L I N+ +SE +ERG V + G +D
Sbjct: 614 TLVNSWILENHSLNIKNMAKSEALERGAVAMFGEKYD 650
>Y185_MYCGE (P47431) Hypothetical lipoprotein MG185 precursor
Length = 701
Score = 30.8 bits (68), Expect = 6.8
Identities = 26/84 (30%), Positives = 38/84 (44%), Gaps = 19/84 (22%)
Query: 57 KSSLNFKLILRHKTNLYQLDFPN------LTKSIIPLNHPF--TTNIDPFTL-------- 100
K L KL+ + K N Y L F L++S + L+ T+N DP L
Sbjct: 84 KKDLQAKLLAKDKNNFYNLTFNYSDVVSILSRSQMELSFDTVDTSNFDPSFLSFNNNISN 143
Query: 101 ---NSIKALIGSCNGLLAIYNGPI 121
NSI AL + +G + + NGP+
Sbjct: 144 VNPNSIYALPATVSGEVLVLNGPV 167
>CG2F_HUMAN (P41002) G2/mitotic-specific cyclin F
Length = 786
Score = 30.8 bits (68), Expect = 6.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Query: 15 LPPDILAEIFSCLPVKSLLRFRSTSKSLRSLIDSH 49
LP D+L I L V+ +L R+ L+ L+D+H
Sbjct: 35 LPEDVLFHILKWLSVEDILAVRAVHSQLKDLVDNH 69
>Y939_SULTO (Q973G3) Hypothetical protein ST0939 precursor
Length = 709
Score = 30.4 bits (67), Expect = 8.9
Identities = 19/58 (32%), Positives = 30/58 (50%), Gaps = 6/58 (10%)
Query: 179 DYKLLRISWLVSLQNSFYH--SHARLFSSKTNSWKIIPIMP----YTVYYAQAMGVFV 230
DYK+ I + NS ++ ++++ KTNSW+II P Y+ YY +FV
Sbjct: 139 DYKIYVIGGMNYSGNSLVPPVNYIQVYNLKTNSWQIIGNAPLRLAYSAYYFNGSALFV 196
>NU5C_TECST (Q9TLC2) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 750
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_MUTAC (Q32551) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 744
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_LACSA (Q32539) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 738
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_HELAN (Q32384) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 741
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_GERJA (P51100) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 744
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_FLARA (Q32238) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 741
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_DAMDI (Q32126) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 744
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_CICIN (Q32007) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 741
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_CARTI (Q32091) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 743
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_ATRJA (P51099) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 749
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_ATHGR (P51098) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 741
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_ASTCO (P51097) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 741
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_ANIIN (P51096) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 741
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_AMBTR (Q31849) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 743
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
>NU5C_ADEHI (P51095) NAD(P)H-quinone oxidoreductase chain 5,
chloroplast (EC 1.6.5.-) (NAD(P)H dehydrogenase, chain
5) (NADH-plastoquinone oxidoreductase chain 5)
Length = 744
Score = 30.4 bits (67), Expect = 8.9
Identities = 10/14 (71%), Positives = 13/14 (92%)
Query: 143 WIIPFLPLPIPNIV 156
WIIPFLPLP+P ++
Sbjct: 9 WIIPFLPLPVPMLI 22
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.323 0.140 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,062,160
Number of Sequences: 164201
Number of extensions: 2112824
Number of successful extensions: 4351
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 4331
Number of HSP's gapped (non-prelim): 22
length of query: 421
length of database: 59,974,054
effective HSP length: 113
effective length of query: 308
effective length of database: 41,419,341
effective search space: 12757157028
effective search space used: 12757157028
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Medicago: description of AC149495.11