BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148917.11 - phase: 0
(473 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1 (BCS1-... 133 9e-31
BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like prot... 131 4e-30
BCS1_YEAST (P32839) Mitochondrial chaperone BCS1 124 7e-28
BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like prot... 122 2e-27
BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like prot... 122 3e-27
BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like prot... 116 1e-25
FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC 3.4.2... 77 7e-14
FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC 3.4.2... 77 1e-13
FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC 3.4.2... 75 5e-13
PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso... 74 6e-13
YME1_SCHMA (P46508) YME1 protein homolog (EC 3.4.24.-) 73 1e-12
PRSX_SPETR (P62335) 26S protease regulatory subunit S10B (Protea... 70 9e-12
PRSX_MOUSE (P62334) 26S protease regulatory subunit S10B (Protea... 70 9e-12
PRSX_HUMAN (P62333) 26S protease regulatory subunit S10B (Protea... 70 9e-12
PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteaso... 70 1e-11
RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as... 70 2e-11
FTH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4... 69 2e-11
PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteaso... 69 3e-11
AF32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegi... 69 3e-11
PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteaso... 69 3e-11
>BCS1_SCHPO (Q9P6Q3) Probable mitochondrial chaperone BCS1
(BCS1-like protein)
Length = 449
Score = 133 bits (335), Expect = 9e-31
Identities = 91/258 (35%), Positives = 148/258 (57%), Gaps = 19/258 (7%)
Query: 113 VKWKLICIEVDSSRIRSYDDDSSAVSEIRSYELTFHKKHKDKIIDSYLPYVMEIAKQIKQ 172
+K+K I+V+ R D ++ +T +D+ I S L ++E K ++
Sbjct: 125 IKYKKCWIQVERERSNRLQDLTTGTPW---ETITLTTLSRDRGIFSEL--LLEAQKFMQS 179
Query: 173 GDMANKIHSNEYGSWRHDVK-FNHPMS---FNTLAIDEELQRDIVNDLDKFVRAREFYRR 228
A K + Y +W + K F HP S +++ ++ +++ I +D+ F+R ++Y
Sbjct: 180 ---AQKNKTTIYTAWATEWKPFGHPRSKRMLSSVVLESNVKKMITDDVHDFLRNSQWYDT 236
Query: 229 TGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIYDLDLTDVG-DNKTLKQLILSMSNRA 287
G ++RGYLLYGPPG+GK+S + A+A L+YDI L+L + G + L L+ ++ +A
Sbjct: 237 RGIPYRRGYLLYGPPGSGKTSFLYALAGELDYDICVLNLAEKGLTDDRLNHLLSNVPPKA 296
Query: 288 ILVIEDIDCTINLQNREEEKEVVNNGDNKVTLSGLLNATDGLWSCCGEEHIIVFTTNHKE 347
++++ED+D Q RE EV + + VT SGLLNA DG+ S +E II TTNH E
Sbjct: 297 VVLLEDVDSA--FQGRERSGEVGFHAN--VTFSGLLNALDGVTS--SDERIIFMTTNHPE 350
Query: 348 RLDPALLRPGRMDKQIHL 365
+LDPAL+RPGR+D + +L
Sbjct: 351 KLDPALVRPGRVDVKAYL 368
>BCS1_HUMAN (Q9Y276) Mitochondrial chaperone BCS1 (BCS1-like
protein) (H-BCS1)
Length = 419
Score = 131 bits (329), Expect = 4e-30
Identities = 86/259 (33%), Positives = 136/259 (52%), Gaps = 13/259 (5%)
Query: 154 KIIDSYLPYVMEIAKQIKQGDMANKIHSNEYGSWRHDVKFNHPMS---FNTLAIDEELQR 210
K+ + L E+A Q ++G +++ WR F +P N++ + + L
Sbjct: 145 KVFFNILEEARELALQQEEGKTV--MYTAVGSEWR---PFGYPRRRRPLNSVVLQQGLAD 199
Query: 211 DIVNDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIYDLDLTDV 270
IV D+ +F+ ++Y G ++RGYLLYGPPG GKSS I A+A L + I L LTD
Sbjct: 200 RIVRDVQEFIDNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDS 259
Query: 271 G-DNKTLKQLILSMSNRAILVIEDIDCTINLQNREEEKEVVNNGDNKVTLSGLLNATDGL 329
+ L L+ ++++++ED+D ++ E V G ++T SGLLNA DG+
Sbjct: 260 SLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPVKYQGLGRLTFSGLLNALDGV 319
Query: 330 WSCCGEEHIIVFTTNHKERLDPALLRPGRMDKQIHLSYCNFSGFKQLVVNYLCITEHELF 389
S E I+ TTNH +RLDPAL+RPGR+D + ++ YC+ Q+ + L
Sbjct: 320 AST--EARIVFMTTNHVDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLA 377
Query: 390 EKI--EVLLGEVQVTPAEI 406
E VL Q++PA++
Sbjct: 378 ENFAEHVLRATNQISPAQV 396
>BCS1_YEAST (P32839) Mitochondrial chaperone BCS1
Length = 456
Score = 124 bits (310), Expect = 7e-28
Identities = 81/224 (36%), Positives = 130/224 (57%), Gaps = 16/224 (7%)
Query: 145 LTFHKKHKDK-IIDSYLPYVMEIAKQIKQGDMANKIHSNEYGSWRHDVKFNHPMSFNTLA 203
+T ++DK + D L +IA + +G I+++ WR KF P + L
Sbjct: 172 VTLTTLYRDKHLFDDILNEAKDIALKTTEGKTV--IYTSFGPEWR---KFGQPKAKRMLP 226
Query: 204 ---IDEELQRDIVNDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNY 260
+D ++ I++D+ F++ ++Y G ++RGYLLYGPPG+GK+S I A+A L+Y
Sbjct: 227 SVILDSGIKEGILDDVYDFMKNGKWYSDRGIPYRRGYLLYGPPGSGKTSFIQALAGELDY 286
Query: 261 DIYDLDLTDVG-DNKTLKQLILSMSNRAILVIEDIDCTINLQNREEEKEVVNNGDNKVTL 319
+I L+L++ + L L+ +M R+IL++EDID N +++ E+ + VT
Sbjct: 287 NICILNLSENNLTDDRLNHLMNNMPERSILLLEDIDAAFNKRSQTGEQ----GFHSSVTF 342
Query: 320 SGLLNATDGLWSCCGEEHIIVFTTNHKERLDPALLRPGRMDKQI 363
SGLLNA DG+ S EE I TTNH E+LD A++RPGR+D ++
Sbjct: 343 SGLLNALDGVTS--SEETITFMTTNHPEKLDAAIMRPGRIDYKV 384
>BCS1_XENLA (Q7ZTL7) Mitochondrial chaperone BCS1 (BCS1-like
protein)
Length = 419
Score = 122 bits (307), Expect = 2e-27
Identities = 64/182 (35%), Positives = 106/182 (58%), Gaps = 3/182 (1%)
Query: 200 NTLAIDEELQRDIVNDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 259
+++ +++ + IV D+ F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 189 SSVVLEQGISEKIVQDVKGFIENPKWYSDRGIPYRRGYLLYGPPGCGKSSFITALAGELE 248
Query: 260 YDIYDLDLTDVG-DNKTLKQLILSMSNRAILVIEDIDCTINLQNREEEKEVVNNGDNKVT 318
Y I + L+D + L L+ ++I+++ED+D ++ ++ G ++T
Sbjct: 249 YSICLMSLSDSSLSDDRLNHLLSVAPQQSIILLEDVDAAFVSRDLNKQNPTAYQGMGRLT 308
Query: 319 LSGLLNATDGLWSCCGEEHIIVFTTNHKERLDPALLRPGRMDKQIHLSYCNFSGFKQLVV 378
SGLLNA DG+ S E I+ TTNH +RLDPAL+RPGR+D + ++ +C Q+ +
Sbjct: 309 FSGLLNALDGVAST--EARIVFMTTNHIDRLDPALIRPGRVDVKQYVGHCTNWQLSQMFL 366
Query: 379 NY 380
+
Sbjct: 367 RF 368
>BCS1_MOUSE (Q9CZP5) Mitochondrial chaperone BCS1 (BCS1-like
protein)
Length = 418
Score = 122 bits (305), Expect = 3e-27
Identities = 81/259 (31%), Positives = 135/259 (51%), Gaps = 13/259 (5%)
Query: 154 KIIDSYLPYVMEIAKQIKQGDMANKIHSNEYGSWRHDVKFNHPMS---FNTLAIDEELQR 210
K+ + L +A Q ++G +++ WR F +P +++ + + L
Sbjct: 145 KVFFNILEEARALALQQEEGKTV--MYTAVGSEWR---TFGYPRRRRPLDSVVLQQGLAD 199
Query: 211 DIVNDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIYDLDLTDV 270
IV D+ +F+ ++Y G ++RGYLLYGPPG GKSS I A+A L + I L LTD
Sbjct: 200 RIVKDIREFIDNPKWYIDRGIPYRRGYLLYGPPGCGKSSFITALAGELEHSICLLSLTDS 259
Query: 271 G-DNKTLKQLILSMSNRAILVIEDIDCTINLQNREEEKEVVNNGDNKVTLSGLLNATDGL 329
+ L L+ ++++++ED+D ++ E + G ++T SGLLNA DG+
Sbjct: 260 SLSDDRLNHLLSVAPQQSLVLLEDVDAAFLSRDLAVENPIKYQGLGRLTFSGLLNALDGV 319
Query: 330 WSCCGEEHIIVFTTNHKERLDPALLRPGRMDKQIHLSYCNFSGFKQLVVNYLCITEHELF 389
S E I+ TTN+ +RLDPAL+RPGR+D + ++ YC+ Q+ + L
Sbjct: 320 AST--EARIVFMTTNYIDRLDPALIRPGRVDLKEYVGYCSHWQLTQMFQRFYPGQAPSLA 377
Query: 390 EKI--EVLLGEVQVTPAEI 406
E VL +++PA++
Sbjct: 378 ENFAEHVLKATSEISPAQV 396
>BCS1_BRARE (Q7ZV60) Mitochondrial chaperone BCS1 (BCS1-like
protein)
Length = 420
Score = 116 bits (290), Expect = 1e-25
Identities = 65/173 (37%), Positives = 107/173 (61%), Gaps = 6/173 (3%)
Query: 200 NTLAIDEELQRDIVNDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLN 259
+++ ++ + IV+D+ +F+ ++Y G ++RGYLLYGPPG GKSS I A+A L
Sbjct: 189 SSVVLESGVAERIVDDVKEFIGNPKWYTDRGIPYRRGYLLYGPPGCGKSSFITALAGELG 248
Query: 260 YDIYDLDLTD--VGDNKTLKQLILSMSNRAILVIEDIDCT-INLQNREEEKEVVNNGDNK 316
Y I + L+D + D++ L L+ ++I+++ED+D ++ + E + G +
Sbjct: 249 YSICLMSLSDRSLSDDR-LNHLLSVAPQQSIILLEDVDAAFVSRELLPTENPLAYQGMGR 307
Query: 317 VTLSGLLNATDGLWSCCGEEHIIVFTTNHKERLDPALLRPGRMDKQIHLSYCN 369
+T SGLLNA DG+ S E I+ TTN ERLDPAL+RPGR+D + ++ +C+
Sbjct: 308 LTFSGLLNALDGVAS--SEARIVFMTTNFIERLDPALVRPGRVDLKQYVGHCS 358
>FTSH_HELPY (P71408) Cell division protein ftsH homolog (EC
3.4.24.-)
Length = 632
Score = 77.4 bits (189), Expect = 7e-14
Identities = 66/217 (30%), Positives = 109/217 (49%), Gaps = 27/217 (12%)
Query: 175 MANKIHSNE------YGSWRHDVKFNHP-MSFNTLAIDEELQRDIVNDLDKFVRAREFYR 227
MAN++ N GS + + P + FN +A +EE + ++V +D F++ E Y
Sbjct: 138 MANRMQKNMGGGIFGMGSAKKLINAEKPNVRFNDMAGNEEAKEEVVEIVD-FLKYPERYA 196
Query: 228 RTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIYDLD-------LTDVGDNKTLKQLI 280
G +G LL GPPGTGK+ L A+A + + + +G ++ ++ L
Sbjct: 197 NLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASR-VRDLF 255
Query: 281 LSMSNRA--ILVIEDIDCTINLQNREEEKEVVNNGDNKVTLSGLLNATDGLWSCCGEEH- 337
+ +A I+ I++ID ++R V N + + TL+ LL DG G E+
Sbjct: 256 ETAKKQAPSIIFIDEIDAIG--KSRAAGGVVSGNDEREQTLNQLLAEMDGF----GSENA 309
Query: 338 --IIVFTTNHKERLDPALLRPGRMDKQIHLSYCNFSG 372
I++ TN E LDPAL+RPGR D+Q+ + +F+G
Sbjct: 310 PVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNG 346
>FTSH_HELPJ (Q9ZM66) Cell division protein ftsH homolog (EC
3.4.24.-)
Length = 632
Score = 77.0 bits (188), Expect = 1e-13
Identities = 65/217 (29%), Positives = 109/217 (49%), Gaps = 27/217 (12%)
Query: 175 MANKIHSNE------YGSWRHDVKFNHP-MSFNTLAIDEELQRDIVNDLDKFVRAREFYR 227
MAN++ N GS + + P + FN +A +EE + ++V +D F++ E Y
Sbjct: 138 MANRMQKNMGGGIFGMGSAKKLINAEKPNVRFNDMAGNEEAKEEVVEIVD-FLKYPERYA 196
Query: 228 RTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIYDLD-------LTDVGDNKTLKQLI 280
G +G LL GPPGTGK+ L A+A + + + +G ++ ++ L
Sbjct: 197 NLGAKIPKGVLLVGPPGTGKTLLAKAVAGEAHVPFFSMGGSSFIEMFVGLGASR-VRDLF 255
Query: 281 LSMSNRA--ILVIEDIDCTINLQNREEEKEVVNNGDNKVTLSGLLNATDGLWSCCGEEH- 337
+ +A I+ I++ID ++R + N + + TL+ LL DG G E+
Sbjct: 256 ETAKKQAPSIIFIDEIDAIG--KSRAAGGMISGNDEREQTLNQLLAEMDGF----GSENA 309
Query: 338 --IIVFTTNHKERLDPALLRPGRMDKQIHLSYCNFSG 372
I++ TN E LDPAL+RPGR D+Q+ + +F+G
Sbjct: 310 PVIVLAATNRPEILDPALMRPGRFDRQVLVDKPDFNG 346
>FTSH_HELFE (O32617) Cell division protein ftsH homolog (EC
3.4.24.-)
Length = 638
Score = 74.7 bits (182), Expect = 5e-13
Identities = 57/185 (30%), Positives = 96/185 (51%), Gaps = 18/185 (9%)
Query: 199 FNTLAIDEELQRDIVNDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYL 258
FN +A +EE + ++V +D F++ + Y G +G LL GPPGTGK+ L A+A
Sbjct: 175 FNDMAGNEEAKEEVVEIVD-FLKYPDRYASLGAKIPKGVLLVGPPGTGKTLLAKAVAGEA 233
Query: 259 NYDIYDLDLTD-----VGDNKTLKQLILSMSNR---AILVIEDIDCTINLQNREEEKEVV 310
+ + + + VG + + + ++ + +I+ I++ID ++R +
Sbjct: 234 SVPFFSMGGSSFIEMFVGLGASRVRDLFDIAKKEAPSIIFIDEIDAIG--KSRAAGGMIS 291
Query: 311 NNGDNKVTLSGLLNATDGLWSCCGEEH---IIVFTTNHKERLDPALLRPGRMDKQIHLSY 367
N + + TL+ LL DG G E+ I++ TN E LDPALLRPGR D+Q+ +
Sbjct: 292 GNDEREQTLNQLLAEMDGF----GSENAPVIVLAATNRPEILDPALLRPGRFDRQVLVDK 347
Query: 368 CNFSG 372
+F G
Sbjct: 348 PDFKG 352
>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome
regulatory subunit)
Length = 436
Score = 74.3 bits (181), Expect = 6e-13
Identities = 54/172 (31%), Positives = 92/172 (53%), Gaps = 18/172 (10%)
Query: 204 IDEELQRDIVNDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIY 263
+DE++ R+I ++K ++ E + + G +G LLYGPPGTGK+ L A+AN+ +
Sbjct: 184 LDEQI-REIREVVEKPLKEPELFEKVGVEPPKGVLLYGPPGTGKTLLAKAVANHADATFI 242
Query: 264 DLDLTD-----VGDNKTLKQLILSMSNR---AILVIEDIDCTINLQNREEEKEVVNNGDN 315
L + +G+ L + + ++ +I+ I++ID + R+ +GD
Sbjct: 243 RLAAPELVQKFIGEGARLVRELFELAREKAPSIIFIDEIDAIGARRMRD-----ATSGDR 297
Query: 316 KV--TLSGLLNATDGLWSCCGEEHIIVFTTNHKERLDPALLRPGRMDKQIHL 365
+V TL+ LL DG ++ ++ TN K+ LDPALLRPGR D+ I +
Sbjct: 298 EVQRTLTQLLAEMDGFDPL--DDIKVIAATNRKDILDPALLRPGRFDRHIKI 347
>YME1_SCHMA (P46508) YME1 protein homolog (EC 3.4.24.-)
Length = 662
Score = 73.2 bits (178), Expect = 1e-12
Identities = 63/197 (31%), Positives = 97/197 (48%), Gaps = 18/197 (9%)
Query: 194 NHPMSFNTLAIDEELQRDIVNDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSSLIAA 253
N +SF+ + +E+++++V D+ +F+R E + + G +G LL GPPG GK+ L A
Sbjct: 160 NTDVSFSDVQGCDEVKKELV-DVVEFLRNPEKFNQIGAKLPKGVLLVGPPGVGKTLLAKA 218
Query: 254 MAN-------YLNYDIYDLDLTDVGDNKTLKQLILSMSNRAILV-IEDIDCTINLQNREE 305
++ Y + +D L +G ++ + + N LV I++ID +
Sbjct: 219 VSGEAQVPFLYASGSSFDEVLVGLGASRIRQLFTTAKQNSPCLVFIDEIDSVGGNRTFSP 278
Query: 306 EKEVVNNGDNKVTLSGLLNATDGLWSCCGEEHIIVF-TTNHKERLDPALLRPGRMDKQIH 364
N T++ LL DG S +E IIV TN E LD ALLRPGR D QIH
Sbjct: 279 HHPFANQ-----TINQLLAEMDGFQS---KEGIIVLGATNQAEVLDKALLRPGRFDVQIH 330
Query: 365 LSYCNFSGFKQLVVNYL 381
+S + G L+ YL
Sbjct: 331 VSPPTYEGRIALLNLYL 347
>PRSX_SPETR (P62335) 26S protease regulatory subunit S10B
(Proteasome subunit p42) (Proteasome 26S subunit ATPase
6) (Conserved ATPase domain protein 44) (CADp44)
Length = 389
Score = 70.5 bits (171), Expect = 9e-12
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 13/154 (8%)
Query: 224 EFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIYDLDLTDVGDNKTLK--QLIL 281
E ++R G +G LLYGPPGTGK+ L A+A+ L+ + + + + D + +LI
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 282 SMSNRA------ILVIEDIDCTINLQNREEEKEVVNNGDNKVTLSGLLNATDGLWSCCGE 335
M N A I+ +++ID + R + + + + TL LLN DG +
Sbjct: 217 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRV 273
Query: 336 EHIIVFTTNHKERLDPALLRPGRMDKQIHLSYCN 369
+ ++ TN + LDPALLRPGR+D++IH+ N
Sbjct: 274 K--MIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
>PRSX_MOUSE (P62334) 26S protease regulatory subunit S10B
(Proteasome subunit p42) (Proteasome 26S subunit ATPase
6)
Length = 389
Score = 70.5 bits (171), Expect = 9e-12
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 13/154 (8%)
Query: 224 EFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIYDLDLTDVGDNKTLK--QLIL 281
E ++R G +G LLYGPPGTGK+ L A+A+ L+ + + + + D + +LI
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 282 SMSNRA------ILVIEDIDCTINLQNREEEKEVVNNGDNKVTLSGLLNATDGLWSCCGE 335
M N A I+ +++ID + R + + + + TL LLN DG +
Sbjct: 217 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRV 273
Query: 336 EHIIVFTTNHKERLDPALLRPGRMDKQIHLSYCN 369
+ ++ TN + LDPALLRPGR+D++IH+ N
Sbjct: 274 K--MIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
>PRSX_HUMAN (P62333) 26S protease regulatory subunit S10B
(Proteasome subunit p42) (Proteasome 26S subunit ATPase
6)
Length = 389
Score = 70.5 bits (171), Expect = 9e-12
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 13/154 (8%)
Query: 224 EFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIYDLDLTDVGDNKTLK--QLIL 281
E ++R G +G LLYGPPGTGK+ L A+A+ L+ + + + + D + +LI
Sbjct: 157 ELFQRVGIIPPKGCLLYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIR 216
Query: 282 SMSNRA------ILVIEDIDCTINLQNREEEKEVVNNGDNKVTLSGLLNATDGLWSCCGE 335
M N A I+ +++ID + R + + + + TL LLN DG +
Sbjct: 217 EMFNYARDHQPCIIFMDEIDA---IGGRRFSEGTSADREIQRTLMELLNQMDGFDTLHRV 273
Query: 336 EHIIVFTTNHKERLDPALLRPGRMDKQIHLSYCN 369
+ ++ TN + LDPALLRPGR+D++IH+ N
Sbjct: 274 K--MIMATNRPDTLDPALLRPGRLDRKIHIDLPN 305
>PSMR_METTH (O26824) Proteasome-activating nucleotidase (Proteasome
regulatory subunit)
Length = 410
Score = 70.1 bits (170), Expect = 1e-11
Identities = 63/235 (26%), Positives = 113/235 (47%), Gaps = 20/235 (8%)
Query: 190 DVKFNHPMSFNTLAIDEELQRDIVNDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSS 249
+V+ +S+ + EE R++ ++ ++ E + + G +G LLYGPPGTGK+
Sbjct: 141 EVEEKPDVSYEQIGGLEEQVREVKETVELPLKKPELFEKIGIEPPKGVLLYGPPGTGKTL 200
Query: 250 LIAAMANYLNYDIYDLDLTD-----VGDNKTLKQLILSMSNR---AILVIEDIDCTINLQ 301
L A+A+ N + ++ +G+ L + + ++ +I+ I++ID +
Sbjct: 201 LAKAVAHETNATFIKIVASEFVRKYIGEGARLVRGVFELAKEKSPSIIFIDEIDAVAAKR 260
Query: 302 NREEEKEVVNNGDNKV--TLSGLLNATDGLWSCCGEEHIIVFTTNHKERLDPALLRPGRM 359
+ +GD +V TL LL DG S IV TN + LDPALLRPGR
Sbjct: 261 LKSS-----TSGDREVQRTLMQLLAELDGFESRGNVG--IVAATNRPDILDPALLRPGRF 313
Query: 360 DKQIHLSYCNFSGFKQLVVNYLCITEHELFEKIEVLLGEVQVTPAEIGEELTKDC 414
D+ I + N G ++++ + + L E++++ L ++T G +L C
Sbjct: 314 DRFIEVPLPNEDGRREIL--KIHTSGMALAEEVDIEL-LARITDGASGADLKAIC 365
>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes
assembly protein RCA1 (EC 3.4.24.-) (TAT-binding homolog
12)
Length = 825
Score = 69.7 bits (169), Expect = 2e-11
Identities = 100/419 (23%), Positives = 169/419 (39%), Gaps = 59/419 (14%)
Query: 68 AQAYLGTKATVSVERVKVSKSGDRKELSFNIDRNEEVSDVFEGISVKWKLICIEVDSSRI 127
A+ Y+ V+ VKV + + K + N RN + + I+ ++
Sbjct: 217 AKGYVAKLIVVNKSMVKVMLNDNGKNQADNYGRN----------FYYFTIGSIDSFEHKL 266
Query: 128 RSYDDDSSAVSEIRSYELTFHKKHKDKIIDSYLPYVMEIAKQI----KQGDMANKIHSNE 183
+ D+ + R L + + K + LP V+ IA I + A
Sbjct: 267 QKAQDELDIDKDFRIPVLYVQEGNWAKAMFQILPTVLMIAGIIWLTRRSAQAAGGSRGGI 326
Query: 184 YGSWRHDVK-FNHP----MSFNTLAIDEELQRDIVNDLDKFVRAREFYRRTGKAWKRGYL 238
+G R K FN + F +A +E + +I+ + F++ Y + G RG +
Sbjct: 327 FGLSRSKAKKFNTETDVKIKFKDVAGCDEAKEEIM-EFVSFLKEPSRYEKMGAKIPRGAI 385
Query: 239 LYGPPGTGKSSLIAAMANYLNYDIYDLD-------LTDVGDNKTLKQLILSMSNR-AILV 290
L GPPGTGK+ L A A Y + VG + + N +I+
Sbjct: 386 LSGPPGTGKTLLAKATAGEAGVPFYFVSGSEFVEMFVGVGAARVRDLFKTARENAPSIVF 445
Query: 291 IEDIDCTINLQNREEEKEVVNNGDNKVTLSGLLNATDGLWSCCGEEHIIVFT-TNHKERL 349
I++ID + R++ N + + TL+ +L DG +H++V TN + L
Sbjct: 446 IDEIDAI--GKARQKGNFSGANDERENTLNQMLVEMDGFTPA---DHVVVLAGTNRPDIL 500
Query: 350 DPALLRPGRMDKQIHLSYCNFSGFKQLVVNYLCITEHELFEKIEVLLGEV--------QV 401
D ALLRPGR D+ I++ G K + +L H L L GE+ +
Sbjct: 501 DKALLRPGRFDRHINIDKPELEGRKAIFAVHL----HHL-----KLAGEIFDLKNRLAAL 551
Query: 402 TPAEIGEELTKDCD-----ATECLQDLIK---FLQAKKMIKEEVKNEENIQEPEPKKMI 452
TP G ++ C+ A +D +K F QA + + V+ + + PE KK++
Sbjct: 552 TPGFSGADIANVCNEAALIAARSDEDAVKLNHFEQAIERVIGGVERKSKLLSPEEKKVV 610
>FTH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC
3.4.24.-)
Length = 628
Score = 69.3 bits (168), Expect = 2e-11
Identities = 54/192 (28%), Positives = 96/192 (49%), Gaps = 12/192 (6%)
Query: 197 MSFNTLAIDEELQRDIVNDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMAN 256
++F+ +A EE + ++ +D F++ + Y G +G LL GPPGTGK+ L A A
Sbjct: 171 VTFDDVAGVEEAKTELSEVVD-FLKFPQRYTALGAKIPKGVLLVGPPGTGKTLLAKAAAG 229
Query: 257 YLNYDIYDLDLTD-----VGDNKTLKQLILSMSNR---AILVIEDIDCTINLQNREEEKE 308
+ + ++ VG + + + + I+ I+++D ++R
Sbjct: 230 EAGVPFFIISGSEFVELFVGAGAARVRDLFEQAKKQAPCIVFIDELDAIG--KSRASGAF 287
Query: 309 VVNNGDNKVTLSGLLNATDGLWSCCGEEHIIVFTTNHKERLDPALLRPGRMDKQIHLSYC 368
+ N + + TL+ LL DG +S G I++ TN E LDPALLRPGR D+Q+ +
Sbjct: 288 MGGNDEREQTLNQLLTEMDG-FSAAGATVIVLAATNRPETLDPALLRPGRFDRQVLVDRP 346
Query: 369 NFSGFKQLVVNY 380
+ +G +++ Y
Sbjct: 347 DLAGRLKILEIY 358
>PSMR_SULTO (Q975U2) Proteasome-activating nucleotidase (Proteasome
regulatory subunit)
Length = 392
Score = 68.9 bits (167), Expect = 3e-11
Identities = 52/168 (30%), Positives = 84/168 (49%), Gaps = 17/168 (10%)
Query: 224 EFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIYDLDLTD-----VGDNKTLKQ 278
E ++ G +G LLYGPPGTGK+ L A+A N + ++ VG+ + +
Sbjct: 158 ELFKEIGIDPPKGVLLYGPPGTGKTLLAKAVATESNATFIQVVASEFAQKFVGEGARIVR 217
Query: 279 LILSMSNR---AILVIEDIDCTINLQNREEEKEVVNNGDNKV--TLSGLLNATDGLWSCC 333
+ ++ R +I+ I++ID + ++ +G+ ++ TL LL DG
Sbjct: 218 EVFELARRKAPSIVFIDEIDAI-----GAKRVDMGTSGEREIQRTLMQLLAEIDGFKPLD 272
Query: 334 GEEHIIVFTTNHKERLDPALLRPGRMDKQIHLSYCNFSGFKQLVVNYL 381
+ I+ TN + LDPALLRPGR D+ I + NF G K++ YL
Sbjct: 273 NVK--IIAATNRLDILDPALLRPGRFDRLIEVPLPNFEGRKEIFRIYL 318
>AF32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-)
(Paraplegin-like protein)
Length = 797
Score = 68.9 bits (167), Expect = 3e-11
Identities = 72/273 (26%), Positives = 121/273 (43%), Gaps = 23/273 (8%)
Query: 197 MSFNTLAIDEELQRDIVNDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMAN 256
+ F +A EE + +I+ ++ F++ + Y+ G +G +L GPPGTGK+ L A A
Sbjct: 305 VKFKDVAGCEEAKLEIMEFVN-FLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAG 363
Query: 257 YLNYDIYDLDLTD-------VGDNKTLKQLILSMSNR-AILVIEDIDCTINLQNREEEKE 308
N + ++ VG + L+ N IL I++ID + R
Sbjct: 364 EANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGN--- 420
Query: 309 VVNNGDNKVTLSGLLNATDGLWSCCGEEHIIVFTTNHKERLDPALLRPGRMDKQIHLSYC 368
+ + TL+ LL DG + +I+ TN + LDPALLRPGR D+QI +
Sbjct: 421 FGGQSEQENTLNQLLVEMDGFNTTTNV--VILAGTNRPDILDPALLRPGRFDRQIFIGPP 478
Query: 369 NFSGFKQLV-VNYLCITEHELFEKIEVLLGEVQVTPAEIGEELTKDCD-----ATECLQD 422
+ G + V+ + EK ++ +TP G ++ C+ A L D
Sbjct: 479 DIKGRASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSD 538
Query: 423 LIK---FLQAKKMIKEEVKNEENIQEPEPKKMI 452
I F QA + + ++ + + +PE KK +
Sbjct: 539 SINQKHFEQAIERVIGGLEKKTQVLQPEEKKTV 571
>PSMR_SULSO (Q980M1) Proteasome-activating nucleotidase (Proteasome
regulatory subunit)
Length = 393
Score = 68.6 bits (166), Expect = 3e-11
Identities = 71/264 (26%), Positives = 123/264 (45%), Gaps = 24/264 (9%)
Query: 206 EELQRDIVNDLDKFVRAREFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIYDL 265
EE R++ ++ ++ E +R G +G LLYGPPGTGK+ L A+A N +
Sbjct: 140 EEQIRELREVVELPLKNPEIFREIGVEPPKGVLLYGPPGTGKTMLAKAVATESNAVFIHV 199
Query: 266 DLTD-----VGDNKTLKQLILSMSNR---AILVIEDIDCTINLQNREEEKEVVNNGDNKV 317
++ VG+ + + + M+ R +I+ I++ID + ++ +G+ ++
Sbjct: 200 VASEFAQKFVGEGARIVRELFEMAKRKAPSIIFIDEIDAI-----GAKRIDIGTSGEREI 254
Query: 318 --TLSGLLNATDGLWSCCGEEHIIVFTTNHKERLDPALLRPGRMDKQIHLSYCNFSGFKQ 375
TL LL DG + I+ TN + LDPALLRPGR D+ I + +F G +
Sbjct: 255 QRTLMQLLAELDGFDPL--DNVKIIAATNRIDILDPALLRPGRFDRIIEVPLPDFKGRTE 312
Query: 376 LVVNYLCITEHELFEKIEVLLGEVQVTPAEIGEELTKDCDATECLQDLIKFLQAKKMIKE 435
+ YL + E +E+L Q+T G ++ C E I+ + K + +
Sbjct: 313 IFNIYLKKMKIEDNINLELL---SQLTEGFSGADIKNVC--VEAAYMAIRDGRNKVTMND 367
Query: 436 --EVKNEENIQEPEPKKMIEEETK 457
E N+ N++ + + M E K
Sbjct: 368 LVEAINKINVKRNKMESMKERREK 391
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.317 0.135 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,759,549
Number of Sequences: 164201
Number of extensions: 2292638
Number of successful extensions: 12602
Number of sequences better than 10.0: 450
Number of HSP's better than 10.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 149
Number of HSP's that attempted gapping in prelim test: 11665
Number of HSP's gapped (non-prelim): 705
length of query: 473
length of database: 59,974,054
effective HSP length: 114
effective length of query: 359
effective length of database: 41,255,140
effective search space: 14810595260
effective search space used: 14810595260
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)
Medicago: description of AC148917.11