BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148819.7 - phase: 0
(343 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PPA5_MOUSE (Q05117) Tartrate-resistant acid phosphatase type 5 p... 41 0.004
PPA5_RAT (P29288) Tartrate-resistant acid phosphatase type 5 pre... 39 0.015
PPA5_PIG (P09889) Tartrate-resistant acid phosphatase type 5 pre... 37 0.072
Y578_CHLPN (Q9Z7X6) Hypothetical UPF0151 protein CPn0578/CP0170/... 33 0.80
PPA5_HUMAN (P13686) Tartrate-resistant acid phosphatase type 5 p... 33 1.4
YKUE_BACSU (O34870) Hypothetical UPF0151 protein ykuE 32 2.3
YA54_AQUAE (O67153) Hypothetical UPF0151 protein AQ_1054 32 2.3
PAP_CANAL (O42617) Poly(A) polymerase (EC 2.7.7.19) (PAP) (Polyn... 32 2.3
VGLH_MEHV1 (P36337) Glycoprotein H precursor 31 4.0
Y746_CHLMU (Q9PJT2) Hypothetical UPF0151 protein TC0746 precursor 31 5.2
Y461_CHLTR (O84467) Hypothetical UPF0151 protein CT461 precursor 31 5.2
SYQ_HAEDU (Q7VLM3) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glu... 31 5.2
HIS7_CHRVO (Q7P0F3) Imidazoleglycerol-phosphate dehydratase (EC ... 31 5.2
HIS7_AMIAM (Q8KY27) Imidazoleglycerol-phosphate dehydratase (EC ... 31 5.2
SYQ_VIBCH (Q9KTA6) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glu... 30 6.8
SYQ_BUCAP (Q8K9E1) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glu... 30 6.8
HIS7_NITEU (Q82WM4) Imidazoleglycerol-phosphate dehydratase (EC ... 30 6.8
HIS7_NEIMB (P64371) Imidazoleglycerol-phosphate dehydratase (EC ... 30 6.8
HIS7_NEIMA (P64370) Imidazoleglycerol-phosphate dehydratase (EC ... 30 6.8
T240_HUMAN (Q9UHV7) Thyroid hormone receptor-associated protein ... 30 8.8
>PPA5_MOUSE (Q05117) Tartrate-resistant acid phosphatase type 5
precursor (EC 3.1.3.2) (TR-AP) (Tartrate-resistant acid
ATPase) (TrATPase)
Length = 327
Score = 41.2 bits (95), Expect = 0.004
Identities = 22/74 (29%), Positives = 33/74 (43%), Gaps = 5/74 (6%)
Query: 30 LKRVIQDETPDFIAFTGDNIFGPSSHDAAESMFK-----AFGPAMESGLPWAAILGNHDQ 84
+ R +Q DFI GDN + HDA++ F+ F +PW + GNHD
Sbjct: 56 IARTVQTMGADFIMSLGDNFYFTGVHDASDKRFQETFEDVFSDRALRNIPWYVLAGNHDH 115
Query: 85 ESTLNREELMSLIS 98
++ + S IS
Sbjct: 116 LGNVSAQIAYSKIS 129
>PPA5_RAT (P29288) Tartrate-resistant acid phosphatase type 5
precursor (EC 3.1.3.2) (TR-AP) (Tartrate-resistant acid
ATPase) (TrATPase)
Length = 327
Score = 39.3 bits (90), Expect = 0.015
Identities = 22/74 (29%), Positives = 32/74 (42%), Gaps = 5/74 (6%)
Query: 30 LKRVIQDETPDFIAFTGDNIFGPSSHDAAESMFK-----AFGPAMESGLPWAAILGNHDQ 84
+ R +Q DFI GDN + HDA + F+ F +PW + GNHD
Sbjct: 56 IARTVQIMGADFIMSLGDNFYFTGVHDANDKRFQETFEDVFSDRALRNIPWYVLAGNHDH 115
Query: 85 ESTLNREELMSLIS 98
++ + S IS
Sbjct: 116 LGNVSAQIAYSKIS 129
>PPA5_PIG (P09889) Tartrate-resistant acid phosphatase type 5
precursor (EC 3.1.3.2) (TR-AP) (Tartrate-resistant acid
ATPase) (TrATPase) (Uteroferrin) (UF)
Length = 340
Score = 37.0 bits (84), Expect = 0.072
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
Query: 40 DFIAFTGDNIFGPSSHDAAESMFK-----AFGPAMESGLPWAAILGNHDQESTLNREELM 94
DFI GDN + HDA + F+ F +PW + GNHD ++ +
Sbjct: 72 DFILSLGDNFYFTGVHDAKDKRFQETFEDVFSDPSLRNVPWHVLAGNHDHLGNVSAQIAY 131
Query: 95 SLIS 98
S IS
Sbjct: 132 SKIS 135
>Y578_CHLPN (Q9Z7X6) Hypothetical UPF0151 protein
CPn0578/CP0170/CPj0578/CpB0602 precursor
Length = 320
Score = 33.5 bits (75), Expect = 0.80
Identities = 23/65 (35%), Positives = 34/65 (51%), Gaps = 5/65 (7%)
Query: 29 FLKRV---IQDETPDFIAFTGDNIFGPSSHDAAESMFKAFGPAMESGLPWAAILGNHDQE 85
FL +V I++ +PD I F GD + D + + F +E+ L AILGNHD
Sbjct: 63 FLNKVSKSIKNFSPDLIVFCGDLLCRARLED--KERLETFLNTLEAPLGVFAILGNHDYS 120
Query: 86 STLNR 90
S ++R
Sbjct: 121 SYISR 125
>PPA5_HUMAN (P13686) Tartrate-resistant acid phosphatase type 5
precursor (EC 3.1.3.2) (TR-AP) (Tartrate-resistant acid
ATPase) (TrATPase)
Length = 323
Score = 32.7 bits (73), Expect = 1.4
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 5/74 (6%)
Query: 30 LKRVIQDETPDFIAFTGDNIFGPSSHDAAESMFK-----AFGPAMESGLPWAAILGNHDQ 84
+ R +Q DFI GDN + D + F+ F +PW + GNHD
Sbjct: 54 IARTVQILGADFILSLGDNFYFTGVQDINDKRFQETFEDVFSDRSLRKVPWYVLAGNHDH 113
Query: 85 ESTLNREELMSLIS 98
++ + S IS
Sbjct: 114 LGNVSAQIAYSKIS 127
>YKUE_BACSU (O34870) Hypothetical UPF0151 protein ykuE
Length = 287
Score = 32.0 bits (71), Expect = 2.3
Identities = 22/80 (27%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Query: 4 GNGITKCRDVLASEFEFCSDLNTTLFLKRVIQDETPDFIAFTGDNIFGPSSHDAAESMFK 63
G I + D S++ DL T + I + PD I FTGD I P ++ +++
Sbjct: 57 GFKIVQFSDAHLSDYFTLEDLKTVIL---TINESKPDLIVFTGDIIDNPDTYQHHQAVIP 113
Query: 64 AFGPAMESGLPWAAILGNHD 83
+ + I GNHD
Sbjct: 114 LL-RKLNAPFGKLCIYGNHD 132
>YA54_AQUAE (O67153) Hypothetical UPF0151 protein AQ_1054
Length = 261
Score = 32.0 bits (71), Expect = 2.3
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 5/62 (8%)
Query: 30 LKRVIQDETPDFIAFTGDNIFGPSSH-DAAESMFKAFGPAMESGLPWAAILGNHDQESTL 88
+KRV + E PD + TGD + G + D M P + A+LGNH+ L
Sbjct: 58 VKRVYEREKPDILVATGDTVDGNMKNLDYLAQMLAELNPPLGK----FAVLGNHEYYVGL 113
Query: 89 NR 90
N+
Sbjct: 114 NQ 115
>PAP_CANAL (O42617) Poly(A) polymerase (EC 2.7.7.19) (PAP)
(Polynucleotide adenylyltransferase)
Length = 558
Score = 32.0 bits (71), Expect = 2.3
Identities = 22/63 (34%), Positives = 35/63 (54%), Gaps = 9/63 (14%)
Query: 84 QESTLNREELMSLISLMD----YSVSQINPSADSLTNSAKGHKMSKIDGFGNYNLRVYGA 139
+++T R E+++L + Y+VS+ +DS+ A G K+ FG+Y L VYG
Sbjct: 41 EQATKKRVEVLTLFQRLVQEFVYTVSKSKNMSDSMAQDAGG----KVFTFGSYRLGVYG- 95
Query: 140 PGS 142
PGS
Sbjct: 96 PGS 98
>VGLH_MEHV1 (P36337) Glycoprotein H precursor
Length = 808
Score = 31.2 bits (69), Expect = 4.0
Identities = 25/116 (21%), Positives = 54/116 (46%), Gaps = 10/116 (8%)
Query: 75 WAAILGNHDQESTLNREELMSLISL----MDYSVSQINPSADSLTNSAKGHKMSKIDGFG 130
W +LG + S R+ M++I MDY A L +A+ + ++ F
Sbjct: 263 WIYLLGVYRNVSDSERDSYMNMIKSLGDSMDYHFLISRAHAQMLILAAEDRLVDEMHSFR 322
Query: 131 NYNLRVYGAPGSMMANS------SVLNLFFLDSGDRVVYQGIRTYDWIKDSQLHWL 180
N R++ + + + N+ S+ ++ +++ R++ +GI + + KD+ H+L
Sbjct: 323 NVIARLFVSLFAFIRNAFQSGYTSLNDIIEIEADLRLIVEGISSAAFRKDASTHFL 378
>Y746_CHLMU (Q9PJT2) Hypothetical UPF0151 protein TC0746 precursor
Length = 329
Score = 30.8 bits (68), Expect = 5.2
Identities = 20/66 (30%), Positives = 35/66 (52%), Gaps = 5/66 (7%)
Query: 29 FLKRV---IQDETPDFIAFTGDNIFGPSSHDAAESMFKAFGPAMESGLPWAAILGNHDQE 85
FLK++ + +PD + FTGD F + + + K F ++ + L A LGNHD
Sbjct: 70 FLKKISRKVSSLSPDMLVFTGD--FICRAKVESSNKLKNFLCSLNAPLGCFACLGNHDYA 127
Query: 86 STLNRE 91
+ ++R+
Sbjct: 128 TYVSRD 133
>Y461_CHLTR (O84467) Hypothetical UPF0151 protein CT461 precursor
Length = 329
Score = 30.8 bits (68), Expect = 5.2
Identities = 22/66 (33%), Positives = 33/66 (49%), Gaps = 5/66 (7%)
Query: 29 FLKRV---IQDETPDFIAFTGDNIFGPSSHDAAESMFKAFGPAMESGLPWAAILGNHDQE 85
FLK+V I +PD + FTGD F + K F ++ + L A LGNHD
Sbjct: 70 FLKKVSRKISSLSPDILVFTGD--FVCRAKVETPERLKHFLCSLHAPLGCFACLGNHDYA 127
Query: 86 STLNRE 91
+ ++R+
Sbjct: 128 TYVSRD 133
>SYQ_HAEDU (Q7VLM3) Glutaminyl-tRNA synthetase (EC 6.1.1.18)
(Glutamine--tRNA ligase) (GlnRS)
Length = 556
Score = 30.8 bits (68), Expect = 5.2
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 217 IPEVRQLFYKQIVGQFQEGVACSRVNSAVLQTFVSMGD---VKAVFIGHDHTND 267
I E LF K G+F+EG AC R + F+ M D + F H T D
Sbjct: 156 IAENLALFEKMKNGEFKEGTACLRAKIDMASPFIVMRDPVLYRVKFAHHHQTGD 209
>HIS7_CHRVO (Q7P0F3) Imidazoleglycerol-phosphate dehydratase (EC
4.2.1.19) (IGPD)
Length = 197
Score = 30.8 bits (68), Expect = 5.2
Identities = 13/23 (56%), Positives = 18/23 (77%)
Query: 47 DNIFGPSSHDAAESMFKAFGPAM 69
DN+ G +SH AE++FKAFG A+
Sbjct: 152 DNLRGHNSHHQAETIFKAFGRAL 174
>HIS7_AMIAM (Q8KY27) Imidazoleglycerol-phosphate dehydratase (EC
4.2.1.19) (IGPD)
Length = 195
Score = 30.8 bits (68), Expect = 5.2
Identities = 12/27 (44%), Positives = 20/27 (73%)
Query: 47 DNIFGPSSHDAAESMFKAFGPAMESGL 73
DN+ G ++H AE++FKAFG A+ + +
Sbjct: 152 DNLRGKNAHHQAETIFKAFGRALRAAV 178
>SYQ_VIBCH (Q9KTA6) Glutaminyl-tRNA synthetase (EC 6.1.1.18)
(Glutamine--tRNA ligase) (GlnRS)
Length = 556
Score = 30.4 bits (67), Expect = 6.8
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Query: 217 IPEVRQLFYKQIVGQFQEGVACSRVNSAVLQTFVSMGD---VKAVFIGHDHTND 267
+ E LF K G+F EG AC R + +F+ M D + F H T D
Sbjct: 151 VEENLALFEKMRAGEFAEGQACLRAKIDMASSFIVMRDPVLYRVRFAEHHQTGD 204
>SYQ_BUCAP (Q8K9E1) Glutaminyl-tRNA synthetase (EC 6.1.1.18)
(Glutamine--tRNA ligase) (GlnRS)
Length = 562
Score = 30.4 bits (67), Expect = 6.8
Identities = 18/52 (34%), Positives = 26/52 (49%), Gaps = 3/52 (5%)
Query: 217 IPEVRQLFYKQIVGQFQEGVACSRVNSAVLQTFVSMGD---VKAVFIGHDHT 265
I E +LF K G+F+EG AC R + +F+ M D + +F H T
Sbjct: 152 ITENLKLFEKMKKGEFKEGEACLRAKINMSSSFIVMRDPVLYRIIFSTHHQT 203
>HIS7_NITEU (Q82WM4) Imidazoleglycerol-phosphate dehydratase (EC
4.2.1.19) (IGPD)
Length = 197
Score = 30.4 bits (67), Expect = 6.8
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 47 DNIFGPSSHDAAESMFKAFGPAM 69
DN+ G ++H AE++FKAFG A+
Sbjct: 154 DNLTGKNAHHQAETIFKAFGRAL 176
>HIS7_NEIMB (P64371) Imidazoleglycerol-phosphate dehydratase (EC
4.2.1.19) (IGPD)
Length = 305
Score = 30.4 bits (67), Expect = 6.8
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 47 DNIFGPSSHDAAESMFKAFGPAM 69
DN+ G ++H AE++FKAFG A+
Sbjct: 260 DNLSGKNAHHQAETVFKAFGRAL 282
>HIS7_NEIMA (P64370) Imidazoleglycerol-phosphate dehydratase (EC
4.2.1.19) (IGPD)
Length = 305
Score = 30.4 bits (67), Expect = 6.8
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 47 DNIFGPSSHDAAESMFKAFGPAM 69
DN+ G ++H AE++FKAFG A+
Sbjct: 260 DNLSGKNAHHQAETVFKAFGRAL 282
>T240_HUMAN (Q9UHV7) Thyroid hormone receptor-associated protein
complex 240 kDa component (Trap240) (Activator-recruited
cofactor 250 kDa component) (ARC250) (Thyroid hormone
receptor associated protein 1)
Length = 2174
Score = 30.0 bits (66), Expect = 8.8
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 143 MMANSSVLNLFFLDSGDRVVYQGIRTYDWIKDSQLHWLRHVSQEPQAQEQDPLHSTDHV- 201
M A+S+ L +V + IRT D K Q+H ++ PQ P H D V
Sbjct: 488 MDADSASQRLVISAPDSQVRFSNIRTNDVAKTPQMHG-TEMANSPQPPPLSP-HPCDVVD 545
Query: 202 ----TSPITPPALAFFHIPIPE 219
+P TP + F+ +P P+
Sbjct: 546 EGVTKTPSTPQSQHFYQMPTPD 567
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.321 0.137 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,481,309
Number of Sequences: 164201
Number of extensions: 1795814
Number of successful extensions: 4342
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 4327
Number of HSP's gapped (non-prelim): 26
length of query: 343
length of database: 59,974,054
effective HSP length: 111
effective length of query: 232
effective length of database: 41,747,743
effective search space: 9685476376
effective search space used: 9685476376
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Medicago: description of AC148819.7