BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148483.5 + phase: 0 /pseudo
         (281 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

CYSP_PLAFA (P25805) Trophozoite cysteine proteinase precursor (E...    30  5.0

>CYSP_PLAFA (P25805) Trophozoite cysteine proteinase precursor (EC
           3.4.22.-) (TCP)
          Length = 569

 Score = 30.4 bits (67), Expect = 5.0
 Identities = 20/70 (28%), Positives = 37/70 (52%), Gaps = 6/70 (8%)

Query: 202 YSSNSRV*LIRNLVA*SSA*DQIEVVSILLQSSLNFVDQTKSEG-----NLLH-LTHLNK 255
           Y++ + V  I+N    S   + I +  ILL+    F+++   E      N+LH L  +NK
Sbjct: 116 YNNKNNVSNIKNDSIKSKKEEYINLERILLEKYKKFINENNEENRKELSNILHKLLEINK 175

Query: 256 MVLRTERKNR 265
           ++LR E+ ++
Sbjct: 176 LILREEKDDK 185


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.355    0.157    0.501 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,129,459
Number of Sequences: 164201
Number of extensions: 796051
Number of successful extensions: 4651
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4650
Number of HSP's gapped (non-prelim): 1
length of query: 281
length of database: 59,974,054
effective HSP length: 109
effective length of query: 172
effective length of database: 42,076,145
effective search space: 7237096940
effective search space used: 7237096940
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.6 bits)
S2: 65 (29.6 bits)