BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142094.3 + phase: 0
(85 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ZN74_HUMAN (Q16587) Zinc finger protein 74 (hZNF7) 32 0.22
Z445_MOUSE (Q8R2V3) Zinc finger protein 445 31 0.64
FOG1_BRARE (P60622) Zinc finger protein FOG1 (Friend of Gata1) (... 31 0.64
ZF96_MOUSE (Q9Z1D7) Zinc finger protein 96 (Zfp-96) 29 1.9
GNTR_BACSU (P10585) Gluconate operon transcriptional repressor (... 29 1.9
FOG1_MOUSE (O35615) Zinc finger protein ZFPM1 (Zinc finger prote... 29 1.9
FOG1_HUMAN (Q8IX07) Zinc finger protein ZFPM1 (Zinc finger prote... 29 1.9
Z224_HUMAN (Q9NZL3) Zinc finger protein 224 29 2.4
NCL1_CAEEL (P34611) B-box type zinc-finger protein ncl-1 29 2.4
RN28_HUMAN (Q969Q1) RING finger protein 28 (Muscle specific ring... 28 3.2
ZN25_HUMAN (P17030) Zinc finger protein 25 (Zinc finger protein ... 28 4.2
Z255_HUMAN (Q9UID9) Zinc finger protein 255 (Bone marrow zinc fi... 28 4.2
TF1A_MOUSE (Q64127) Transcription intermediary factor 1-alpha (T... 28 4.2
TF1A_HUMAN (O15164) Transcription intermediary factor 1-alpha (T... 28 4.2
NRG2_YEAST (P38082) Probable transcriptional regulator NRG2 28 4.2
Z473_MOUSE (Q8BI67) Zinc finger protein 473 homolog (Zinc finger... 28 5.4
Z234_HUMAN (Q14588) Zinc finger protein 234 (Zinc finger protein... 28 5.4
Z232_HUMAN (Q9UNY5) Zinc finger protein 232 (Zinc finger and SCA... 28 5.4
ZO72_XENLA (P18752) Oocyte zinc finger protein XLCOF7.2 (Fragment) 27 7.1
ZF27_MOUSE (P10077) Zinc finger protein 27 (Zfp-27) (mKR4 protei... 27 7.1
>ZN74_HUMAN (Q16587) Zinc finger protein 74 (hZNF7)
Length = 643
Score = 32.3 bits (72), Expect = 0.22
Identities = 16/60 (26%), Positives = 32/60 (52%), Gaps = 6/60 (10%)
Query: 10 DHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDCSNI 69
+HR + + EK FC +C F C + ++H+R ++ + ++ S +K F CS++
Sbjct: 292 EHRRIHTGEKPFFCGECGKAF--SCHSSLNVHQRI----HTGERPYKCSACEKAFSCSSL 345
>Z445_MOUSE (Q8R2V3) Zinc finger protein 445
Length = 986
Score = 30.8 bits (68), Expect = 0.64
Identities = 22/89 (24%), Positives = 36/89 (39%), Gaps = 10/89 (11%)
Query: 3 SSSGYCDDHRDLRSNEKNTFCVDCAV------RFCRHCK----EAHSIHRRFQIYRYSYQ 52
S Y +H+ + + EK C C F RH K E + +R + ++ SY+
Sbjct: 563 SCKSYAIEHQRIHTQEKPYKCTRCRKTFRWKSNFSRHMKLHHKEVYKQEKRQEDFKQSYR 622
Query: 53 DVFRHSELQKHFDCSNIQVTLNALLQVID 81
S ++K F C N T +I+
Sbjct: 623 QSQVISTVEKTFPCQNCGKTFTQKKSLIE 651
>FOG1_BRARE (P60622) Zinc finger protein FOG1 (Friend of Gata1)
(Fragment)
Length = 224
Score = 30.8 bits (68), Expect = 0.64
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Query: 3 SSSGYCDDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRF 44
S SG +D D + TFC C +RF RH + + +H+RF
Sbjct: 153 SPSGSAEDQDD---DPTRTFCQACNIRFSRH--DNYIVHKRF 189
>ZF96_MOUSE (Q9Z1D7) Zinc finger protein 96 (Zfp-96)
Length = 501
Score = 29.3 bits (64), Expect = 1.9
Identities = 18/59 (30%), Positives = 28/59 (46%), Gaps = 4/59 (6%)
Query: 9 DDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSI--HRRFQIYR--YSYQDVFRHSELQKH 63
+ H+ L S EK+ C +C FC+ H + HRR + Y+ + R S L +H
Sbjct: 341 NQHQRLHSGEKHYHCNECGKAFCQKAGLFHHLKSHRRNRPYQCLQCNKSFNRRSTLSQH 399
>GNTR_BACSU (P10585) Gluconate operon transcriptional repressor (P28
protein)
Length = 243
Score = 29.3 bits (64), Expect = 1.9
Identities = 15/37 (40%), Positives = 22/37 (58%)
Query: 49 YSYQDVFRHSELQKHFDCSNIQVTLNALLQVIDSFSL 85
+S+QDV H + + D S IQ+ N L V++SF L
Sbjct: 137 FSFQDVLFHETIIRAIDHSYIQMIWNNLKPVMESFIL 173
>FOG1_MOUSE (O35615) Zinc finger protein ZFPM1 (Zinc finger protein
multitype 1) (Friend of GATA protein 1) (Friend of
GATA-1) (FOG-1)
Length = 995
Score = 29.3 bits (64), Expect = 1.9
Identities = 11/32 (34%), Positives = 18/32 (55%), Gaps = 2/32 (6%)
Query: 13 DLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRF 44
D + T C C +RF RH E +++H+R+
Sbjct: 688 DAEDDPSRTLCEACNIRFSRH--ETYTVHKRY 717
>FOG1_HUMAN (Q8IX07) Zinc finger protein ZFPM1 (Zinc finger protein
multitype 1) (Friend of GATA protein 1) (Friend of
GATA-1) (FOG-1)
Length = 1004
Score = 29.3 bits (64), Expect = 1.9
Identities = 11/32 (34%), Positives = 18/32 (55%), Gaps = 2/32 (6%)
Query: 13 DLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRF 44
D + T C C +RF RH E +++H+R+
Sbjct: 673 DAEDDPSRTLCEACNIRFSRH--ETYTVHKRY 702
>Z224_HUMAN (Q9NZL3) Zinc finger protein 224
Length = 707
Score = 28.9 bits (63), Expect = 2.4
Identities = 20/67 (29%), Positives = 29/67 (42%), Gaps = 8/67 (11%)
Query: 3 SSSGYCDDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSY------QDVFR 56
S + D H+ L S EK+ C +C FC A IH+R + Y ++ +
Sbjct: 158 SDVSHFDFHQQLHSGEKSHTCDECGKNFC--YISALRIHQRVHMGEKCYKCDVCGKEFSQ 215
Query: 57 HSELQKH 63
S LQ H
Sbjct: 216 SSHLQTH 222
Score = 27.3 bits (59), Expect = 7.1
Identities = 19/62 (30%), Positives = 33/62 (52%), Gaps = 6/62 (9%)
Query: 11 HRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDCSNIQ 70
H+ LRS EK C +C RF ++ + HS H+R ++ + ++ E K F S+ +
Sbjct: 558 HQRLRSGEKPFKCEECGKRFTQN-SQLHS-HQRV----HTGEKPYKCDECGKGFSWSSTR 611
Query: 71 VT 72
+T
Sbjct: 612 LT 613
>NCL1_CAEEL (P34611) B-box type zinc-finger protein ncl-1
Length = 851
Score = 28.9 bits (63), Expect = 2.4
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Query: 15 RSNEKNT-FCVDCAVRFCRHCKEAHSIHRRFQIYR 48
+SNE T FC DC C +C AH F +R
Sbjct: 136 KSNETATSFCQDCNANLCDNCTMAHKFMHCFADHR 170
>RN28_HUMAN (Q969Q1) RING finger protein 28 (Muscle specific ring
finger protein 1) (MuRF1) (Striated muscle RING zinc
finger protein) (Iris ring finger protein)
Length = 353
Score = 28.5 bits (62), Expect = 3.2
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDCS 67
C +H D + N +C+ C V C CK IH+ ++ Q VF+ + + + +C
Sbjct: 122 CKEHED---EKINIYCLTCEVPTCSMCK-VFGIHKACEV--APLQSVFQGQKTELN-NCI 174
Query: 68 NIQVTLNALLQVI 80
++ V N +Q I
Sbjct: 175 SMLVAGNDRVQTI 187
>ZN25_HUMAN (P17030) Zinc finger protein 25 (Zinc finger protein
KOX19)
Length = 456
Score = 28.1 bits (61), Expect = 4.2
Identities = 20/80 (25%), Positives = 33/80 (41%), Gaps = 17/80 (21%)
Query: 2 NSSSGYCDDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSY---------- 51
NS +G H+ + EK C +C FC+ K A +H+ SY
Sbjct: 99 NSRNGELTKHQKTHTTEKACECKECGKFFCQ--KSALIVHQHTHSKGKSYDCDKCGKSFS 156
Query: 52 --QDVFRHSEL---QKHFDC 66
+D+ RH ++ K ++C
Sbjct: 157 KNEDLIRHQKIHTRDKTYEC 176
>Z255_HUMAN (Q9UID9) Zinc finger protein 255 (Bone marrow zinc
finger 2) (BMZF-2)
Length = 623
Score = 28.1 bits (61), Expect = 4.2
Identities = 19/61 (31%), Positives = 27/61 (44%), Gaps = 8/61 (13%)
Query: 9 DDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSY------QDVFRHSELQK 62
D H+ L S EK+ C +C FC A IH+R + Y ++ + S LQ
Sbjct: 80 DFHQQLHSGEKSHTCDECGKNFC--YISALRIHQRVHMGEKCYKCDVCGKEFSQSSHLQT 137
Query: 63 H 63
H
Sbjct: 138 H 138
>TF1A_MOUSE (Q64127) Transcription intermediary factor 1-alpha
(TIF1-alpha) (Tripartite motif-containing protein 24)
Length = 1051
Score = 28.1 bits (61), Expect = 4.2
Identities = 12/31 (38%), Positives = 16/31 (50%), Gaps = 5/31 (16%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVRFCRHCKEAH 38
C+D+ E N FCV+C C+ C AH
Sbjct: 166 CEDNA-----EANGFCVECVEWLCKTCIRAH 191
>TF1A_HUMAN (O15164) Transcription intermediary factor 1-alpha
(TIF1-alpha) (Tripartite motif-containing protein 24)
Length = 1050
Score = 28.1 bits (61), Expect = 4.2
Identities = 12/31 (38%), Positives = 16/31 (50%), Gaps = 5/31 (16%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVRFCRHCKEAH 38
C+D+ E N FCV+C C+ C AH
Sbjct: 166 CEDNA-----EANGFCVECVEWLCKTCIRAH 191
>NRG2_YEAST (P38082) Probable transcriptional regulator NRG2
Length = 220
Score = 28.1 bits (61), Expect = 4.2
Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 3 SSSGYCDDHRDLRSNEKNTFC--VDCAVRFCRH--CKEAHSIH 41
++SG+ H + + EKN C C RF RH C + + H
Sbjct: 163 TTSGHLSRHNRIHTGEKNHICPHEGCGQRFSRHDNCNQHYRTH 205
>Z473_MOUSE (Q8BI67) Zinc finger protein 473 homolog (Zinc finger
protein 100) (Zfp-100)
Length = 892
Score = 27.7 bits (60), Expect = 5.4
Identities = 18/76 (23%), Positives = 33/76 (42%), Gaps = 15/76 (19%)
Query: 11 HRDLRSNEKNTFCVDCAVRFCRH--CKEAHSIHRRFQIYR------------YSYQDVFR 56
H+ + S +K C +C FCR E +H F+ ++ + + R
Sbjct: 478 HQRIHSGQKPHKCSECGKAFCRRTDLTEHQRVHSGFRPHQCPVCARTFNRPSHLVRHRLR 537
Query: 57 HSELQKHFDCSNIQVT 72
H+E ++HF C+ + T
Sbjct: 538 HAE-ERHFGCAKCKET 552
>Z234_HUMAN (Q14588) Zinc finger protein 234 (Zinc finger protein
HZF4)
Length = 700
Score = 27.7 bits (60), Expect = 5.4
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 8/61 (13%)
Query: 9 DDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSY------QDVFRHSELQK 62
D H+ L S EK+ C +C FC + H IH+R + Y ++ + S LQ
Sbjct: 164 DLHQQLHSGEKSHTCDECGKSFC-YISALH-IHQRVHMGEKCYKCDVCGKEFSQSSHLQT 221
Query: 63 H 63
H
Sbjct: 222 H 222
>Z232_HUMAN (Q9UNY5) Zinc finger protein 232 (Zinc finger and SCAN
domain containing protein 11)
Length = 417
Score = 27.7 bits (60), Expect = 5.4
Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 3 SSSGYCDDHRDLRSNEKNTFCVDC--AVRFCRHCKEAHSIHRR 43
S S Y HR + S EK C +C A +C +H R
Sbjct: 370 SQSSYLSQHRRIHSGEKPFICKECGKAYGWCSELIRHRRVHAR 412
>ZO72_XENLA (P18752) Oocyte zinc finger protein XLCOF7.2 (Fragment)
Length = 391
Score = 27.3 bits (59), Expect = 7.1
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 3 SSSGYCDDHRDLRSNEKNTFCVDCAVRF--CRHCKEAHSIH 41
+SS Y DHR + + EK + C +C F C H H
Sbjct: 322 ASSTYLRDHRRIHTGEKLSSCSECGKYFLNCWSLARHHRTH 362
>ZF27_MOUSE (P10077) Zinc finger protein 27 (Zfp-27) (mKR4 protein)
(Fragment)
Length = 419
Score = 27.3 bits (59), Expect = 7.1
Identities = 17/55 (30%), Positives = 27/55 (48%), Gaps = 2/55 (3%)
Query: 11 HRDLRSNEKNTFCVDCAVRFCRHCK-EAHS-IHRRFQIYRYSYQDVFRHSELQKH 63
HR + + EK+ CV C + F + +AH IH + Y+ + F S+ Q H
Sbjct: 180 HRRIHTGEKSYVCVKCGLAFVQRAHLDAHQVIHTGEKPYQCGHCGKFFTSKSQLH 234
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.329 0.137 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,288,054
Number of Sequences: 164201
Number of extensions: 310061
Number of successful extensions: 1052
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1034
Number of HSP's gapped (non-prelim): 38
length of query: 85
length of database: 59,974,054
effective HSP length: 61
effective length of query: 24
effective length of database: 49,957,793
effective search space: 1198987032
effective search space used: 1198987032
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC142094.3