BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141863.8 - phase: 0
(271 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC... 459 e-129
PSB5_ARATH (O23717) Proteasome subunit beta type 5 precursor (EC... 447 e-125
PSB5_HUMAN (P28074) Proteasome subunit beta type 5 precursor (EC... 288 1e-77
PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC... 286 4e-77
PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC 3... 284 1e-76
PSB5_CHICK (P34065) Proteasome subunit beta type 5 precursor (EC... 268 1e-71
PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC 3... 261 1e-69
PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC... 257 2e-68
PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC... 252 8e-67
PSB5_SCHPO (P30655) Proteasome subunit beta type 5 precursor (EC... 244 2e-64
PSB5_YEAST (P30656) Proteasome component PRE2 precursor (EC 3.4.... 243 3e-64
PSB8_PIG (Q29576) Proteasome subunit beta type 8 (EC 3.4.25.1) (... 148 1e-35
PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25... 135 1e-31
PSMB_METTH (O27270) Proteasome beta subunit precursor (EC 3.4.25... 130 3e-30
PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25... 129 1e-29
PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25... 115 9e-26
PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25... 113 4e-25
PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25... 110 3e-24
PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25... 108 1e-23
PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25... 107 2e-23
>PSB5_SPIOL (O24361) Proteasome subunit beta type 5 precursor (EC
3.4.25.1) (20S proteasome subunit E) (Proteasome epsilon
chain)
Length = 272
Score = 459 bits (1180), Expect = e-129
Identities = 225/269 (83%), Positives = 239/269 (88%)
Query: 2 LDTTALESFPSLISHGINVAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLAFI 61
LDT+ LES + V + PSF LPN DFDGF KE +QMVKPAKGTTTLAFI
Sbjct: 3 LDTSGLESTAPIFRRSDFVFDGLQMTPSFDLPNPTDFDGFQKEAVQMVKPAKGTTTLAFI 62
Query: 62 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 121
FK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE
Sbjct: 63 FKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 122
Query: 122 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFS 181
LANKRRISVTGASKLLANILY+YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG RFS
Sbjct: 123 LANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGMRFS 182
Query: 182 VGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKL 241
VGSGSPYAYGVLD+GYKYDM+VEEASELARRAIYHAT+RDGASGGV SVY+VGP GWKK+
Sbjct: 183 VGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVVSVYHVGPDGWKKV 242
Query: 242 SGDDVGELHYHYNPVTPSTVEQEMVEAAG 270
+GDDVG+LH+ Y PV P+TVEQEMVE G
Sbjct: 243 TGDDVGDLHFQYYPVVPATVEQEMVEVVG 271
>PSB5_ARATH (O23717) Proteasome subunit beta type 5 precursor (EC
3.4.25.1) (20S proteasome subunit E) (Proteasome epsilon
chain)
Length = 274
Score = 447 bits (1149), Expect = e-125
Identities = 222/269 (82%), Positives = 240/269 (88%), Gaps = 2/269 (0%)
Query: 2 LDTTALESFPSLISHGIN--VAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLA 59
LDT+ E+ +I G + + E+S+ PSF LP + +FDGF K+ M+K AKGTTTLA
Sbjct: 3 LDTSGFETSMPMIGFGSSSDMLDELSSVPSFDLPRTKEFDGFQKKAKDMLKHAKGTTTLA 62
Query: 60 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 119
FIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 63 FIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 122
Query: 120 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNR 179
HELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG+R
Sbjct: 123 HELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDR 182
Query: 180 FSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWK 239
FSVGSGSPYAYGVLDSGYKYDMSVEEASELARR+IYHATFRDGASGGVASVY+VGP GW
Sbjct: 183 FSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEGWT 242
Query: 240 KLSGDDVGELHYHYNPVTPSTVEQEMVEA 268
KLSGDDVGELHYHY PV P+T EQ M EA
Sbjct: 243 KLSGDDVGELHYHYYPVAPATAEQVMEEA 271
>PSB5_HUMAN (P28074) Proteasome subunit beta type 5 precursor (EC
3.4.25.1) (Proteasome epsilon chain) (Macropain epsilon
chain) (Multicatalytic endopeptidase complex epsilon
chain) (Proteasome subunit X) (Proteasome chain 6)
(Proteasome subunit MB1)
Length = 208
Score = 288 bits (736), Expect = 1e-77
Identities = 136/205 (66%), Positives = 165/205 (80%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 4 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 63
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 64 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 123
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233
R+ G FSVGSGS YAYGV+D GY YD+ VE+A +LARRAIY AT+RD SGG ++Y+V
Sbjct: 124 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 183
Query: 234 GPTGWKKLSGDDVGELHYHYNPVTP 258
GW ++S D+V +LH Y+ TP
Sbjct: 184 REDGWIRVSSDNVADLHEKYSGSTP 208
>PSB5_MOUSE (O55234) Proteasome subunit beta type 5 precursor (EC
3.4.25.1) (Proteasome epsilon chain) (Macropain epsilon
chain) (Multicatalytic endopeptidase complex epsilon
chain) (Proteasome subunit X) (Proteasome chain 6)
Length = 209
Score = 286 bits (732), Expect = 4e-77
Identities = 136/204 (66%), Positives = 164/204 (79%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTTTLAF F GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 4 GTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 63
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 64 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 123
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233
R+ G FSVGSGS YAYGV+D GY YD+ VEEA +LARRAIY AT+RD SGG ++Y+V
Sbjct: 124 RISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHV 183
Query: 234 GPTGWKKLSGDDVGELHYHYNPVT 257
GW ++S D+V +LH Y+ V+
Sbjct: 184 REDGWIRVSSDNVADLHDKYSSVS 207
>PSB5_RAT (P28075) Proteasome subunit beta type 5 precursor (EC
3.4.25.1) (Proteasome epsilon chain) (Macropain epsilon
chain) (Multicatalytic endopeptidase complex epsilon
chain) (Proteasome subunit X) (Proteasome chain 6)
Length = 208
Score = 284 bits (727), Expect = 1e-76
Identities = 135/205 (65%), Positives = 163/205 (78%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 4 GTTTLAFKFQHGVIVAADSRATAGPYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 63
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 64 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 123
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233
R+ G FSVGSGS YA+GV+D GY YD+ VEEA +LARRAIY AT+RD SGG ++Y+V
Sbjct: 124 RISGTAFSVGSGSVYAFGVMDRGYSYDLQVEEAYDLARRAIYQATYRDAYSGGAVNLYHV 183
Query: 234 GPTGWKKLSGDDVGELHYHYNPVTP 258
GW ++S D+V +LH Y P
Sbjct: 184 REDGWIRVSSDNVADLHDKYTSSIP 208
>PSB5_CHICK (P34065) Proteasome subunit beta type 5 precursor (EC
3.4.25.1) (Proteasome chain 1) (Macropain chain 1)
(Multicatalytic endopeptidase complex chain 1)
(Fragment)
Length = 256
Score = 268 bits (684), Expect = 1e-71
Identities = 130/200 (65%), Positives = 156/200 (78%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTTTLAF F GV+VA DSRA+ G YI+SQ+V+K+IEINP +LGTMAGGAADC FW R L
Sbjct: 55 GTTTLAFKFAHGVVVAVDSRATAGSYIASQTVQKVIEINPSLLGTMAGGAADCSFWERLL 114
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+CR++EL NK ISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 115 ARQCRVYELRNKEPISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGT 174
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233
R+ G F+VGSGS YAYGVLD G + DM+ +EA ELARRAI+ A RD SGG +VY+V
Sbjct: 175 RIPGEAFAVGSGSSYAYGVLDGGRRPDMATDEALELARRAIFQAARRDAYSGGSVTVYHV 234
Query: 234 GPTGWKKLSGDDVGELHYHY 253
GP GW+++S DV LH Y
Sbjct: 235 GPRGWRRVSSHDVAGLHDGY 254
>PSB8_RAT (P28064) Proteasome subunit beta type 8 precursor (EC
3.4.25.1) (Proteasome component C13) (Macropain subunit
C13) (Multicatalytic endopeptidase complex subunit C13)
(Fragment)
Length = 271
Score = 261 bits (668), Expect = 1e-69
Identities = 135/256 (52%), Positives = 173/256 (66%), Gaps = 1/256 (0%)
Query: 2 LDTTALESFPSLISHGINVAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLAFI 61
+D L S P S + A E++ P Q + G +E ++ A GTTTLAF
Sbjct: 16 VDAEGLRSDPGHYSFSVQ-APELALPRGMQPTEFSRSFGDDQERKVQIEMAHGTTTLAFK 74
Query: 62 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 121
F+ GV+VA DSRAS G YI++ V K+IEINPY+LGTM+G AADCQ+W R L +CRL+
Sbjct: 75 FQHGVIVAVDSRASAGSYIATIRVNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYY 134
Query: 122 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFS 181
L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS
Sbjct: 135 LRNGERISVSAASKLLSNMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFS 194
Query: 182 VGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKL 241
GSG+ YAYGV+DSGY+ D+S EEA +LARRAI +AT RD SGGV ++Y++ GW K+
Sbjct: 195 TGSGNTYAYGVMDSGYRQDLSPEEAYDLARRAIVYATHRDSYSGGVVNMYHMKKDGWVKV 254
Query: 242 SGDDVGELHYHYNPVT 257
DV +L + Y T
Sbjct: 255 ESTDVSDLLHKYREAT 270
>PSB8_MOUSE (P28063) Proteasome subunit beta type 8 precursor (EC
3.4.25.1) (Proteasome component C13) (Macropain subunit
C13) (Multicatalytic endopeptidase complex subunit C13)
Length = 276
Score = 257 bits (656), Expect = 2e-68
Identities = 131/235 (55%), Positives = 167/235 (70%), Gaps = 4/235 (1%)
Query: 21 AGEISAPPSFQLPNS--NDFDGFVKETIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGG 78
A E++ P Q P + F G + +Q ++ A GTTTLAF F+ GV+VA DSRA+ G
Sbjct: 39 APELALPRGMQ-PTAFLRSFGGDQERNVQ-IEMAHGTTTLAFKFQHGVIVAVDSRATAGS 96
Query: 79 YISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLA 138
YISS + K+IEINPY+LGTM+G AADCQ+W R L +CRL+ L N RISV+ ASKLL+
Sbjct: 97 YISSLRMNKVIEINPYLLGTMSGCAADCQYWERLLAKECRLYYLRNGERISVSAASKLLS 156
Query: 139 NILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGYK 198
N++ YRGMGLS+G+MI GWD+ GPGLYYVD G RL G FS GSG+ YAYGV+DSGY+
Sbjct: 157 NMMLQYRGMGLSMGSMICGWDKKGPGLYYVDDNGTRLSGQMFSTGSGNTYAYGVMDSGYR 216
Query: 199 YDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKLSGDDVGELHYHY 253
D+S EEA +L RRAI +AT RD SGGV ++Y++ GW K+ DV +L Y Y
Sbjct: 217 QDLSPEEAYDLGRRAIAYATHRDNYSGGVVNMYHMKEDGWVKVESSDVSDLLYKY 271
>PSB8_HUMAN (P28062) Proteasome subunit beta type 8 precursor (EC
3.4.25.1) (Proteasome component C13) (Macropain subunit
C13) (Multicatalytic endopeptidase complex subunit C13)
Length = 276
Score = 252 bits (643), Expect = 8e-67
Identities = 122/205 (59%), Positives = 154/205 (74%)
Query: 49 VKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 108
++ A GTTTLAF F+ GV+ A DSRAS G YIS+ V K+IEINPY+LGTM+G AADCQ+
Sbjct: 67 IEMAHGTTTLAFKFQHGVIAAVDSRASAGSYISALRVNKVIEINPYLLGTMSGCAADCQY 126
Query: 109 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYV 168
W R L +CRL+ L N RISV+ ASKLL+N++ YRGMGLS+G+MI GWD+ GPGLYYV
Sbjct: 127 WERLLAKECRLYYLRNGERISVSAASKLLSNMMCQYRGMGLSMGSMICGWDKKGPGLYYV 186
Query: 169 DSEGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVA 228
D G RL GN FS GSG+ YAYGV+DSGY+ ++S EEA +L RRAI +AT RD SGGV
Sbjct: 187 DEHGTRLSGNMFSTGSGNTYAYGVMDSGYRPNLSPEEAYDLGRRAIAYATHRDSYSGGVV 246
Query: 229 SVYYVGPTGWKKLSGDDVGELHYHY 253
++Y++ GW K+ DV +L + Y
Sbjct: 247 NMYHMKEDGWVKVESTDVSDLLHQY 271
>PSB5_SCHPO (P30655) Proteasome subunit beta type 5 precursor (EC
3.4.25.1) (Proteasome component pts1) (Macropain subunit
pts1) (Multicatalytic endopeptidase complex subunit
pts1)
Length = 272
Score = 244 bits (623), Expect = 2e-64
Identities = 119/202 (58%), Positives = 154/202 (75%)
Query: 48 MVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQ 107
++K GTTTLAF ++ G++V DSRAS G I+SQ+VKK+IEINPY+LGT+AGGAADCQ
Sbjct: 55 LIKMNHGTTTLAFRYQHGIVVCVDSRASAGPLIASQTVKKVIEINPYLLGTLAGGAADCQ 114
Query: 108 FWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYY 167
FW LG++CRLH+L NK ISV+ ASK+L+NI YSY+G GLS+GTM+AG + G LYY
Sbjct: 115 FWETVLGMECRLHQLRNKELISVSAASKILSNITYSYKGYGLSMGTMLAGTGKGGTALYY 174
Query: 168 VDSEGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGV 227
+DS+G RLKG+ FSVGSGS +AYGVLDSGY++D+S +EA LA+R+I AT RD SGG
Sbjct: 175 IDSDGTRLKGDLFSVGSGSTFAYGVLDSGYRWDLSKQEALYLAQRSIVAATHRDAYSGGS 234
Query: 228 ASVYYVGPTGWKKLSGDDVGEL 249
++Y++ GW DV L
Sbjct: 235 VNLYHIDENGWVFHGNFDVDSL 256
>PSB5_YEAST (P30656) Proteasome component PRE2 precursor (EC
3.4.25.1) (Macropain subunit PRE2) (Proteinase YSCE
subunit PRE2) (Multicatalytic endopeptidase complex
subunit PRE2)
Length = 287
Score = 243 bits (621), Expect = 3e-64
Identities = 120/204 (58%), Positives = 154/204 (74%), Gaps = 1/204 (0%)
Query: 49 VKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQF 108
+K A GTTTLAF F+ G++VA DSRA+ G +++SQ+VKK+IEINP++LGTMAGGAADCQF
Sbjct: 70 IKIAHGTTTLAFRFQGGIIVAVDSRATAGNWVASQTVKKVIEINPFLLGTMAGGAADCQF 129
Query: 109 WHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYY 167
W LG +CRLHEL K RISV ASK+L+N++Y Y+G GLS+GTMI G+ + GP +YY
Sbjct: 130 WETWLGSQCRLHELREKERISVAAASKILSNLVYQYKGAGLSMGTMICGYTRKEGPTIYY 189
Query: 168 VDSEGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGV 227
VDS+G RLKG+ F VGSG +AYGVLDS YK+D+SVE+A L +R+I A RD SGG
Sbjct: 190 VDSDGTRLKGDIFCVGSGQTFAYGVLDSNYKWDLSVEDALYLGKRSILAAAHRDAYSGGS 249
Query: 228 ASVYYVGPTGWKKLSGDDVGELHY 251
++Y+V GW DVGEL +
Sbjct: 250 VNLYHVTEDGWIYHGNHDVGELFW 273
>PSB8_PIG (Q29576) Proteasome subunit beta type 8 (EC 3.4.25.1)
(Proteasome component C13) (Macropain subunit C13)
(Multicatalytic endopeptidase complex subunit C13)
(Fragment)
Length = 104
Score = 148 bits (374), Expect = 1e-35
Identities = 69/104 (66%), Positives = 84/104 (80%)
Query: 118 RLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG 177
RL+ L N RISV+ ASKL +N++Y YRGMGLS+G+MI GWD+ GPGLYYVD G RL G
Sbjct: 1 RLYYLRNGARISVSAASKLXSNMMYQYRGMGLSMGSMICGWDKKGPGLYYVDENGTRLSG 60
Query: 178 NRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRD 221
N FS GSG+ YAYGV+DSG++YD+S+EEA +L RRAI HAT RD
Sbjct: 61 NMFSTGSGNTYAYGVMDSGHRYDLSIEEAYDLGRRAIVHATHRD 104
>PSMB_METTE (Q9P992) Proteasome beta subunit precursor (EC 3.4.25.1)
(Multicatalytic endopeptidase complex beta subunit)
Length = 210
Score = 135 bits (340), Expect = 1e-31
Identities = 72/198 (36%), Positives = 123/198 (61%), Gaps = 1/198 (0%)
Query: 50 KPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFW 109
K KGTTT+ + +G+++A++ RA+MG +I+S++ KK+ +I+ + T AG D Q
Sbjct: 5 KYLKGTTTVGVVCTDGIVLASEQRATMGHFIASKTAKKVYQIDDLVGMTTAGSVGDAQQL 64
Query: 110 HRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVD 169
R + ++ +L+++ +++ G + L++N L R + V +I G D+ GPG+Y +D
Sbjct: 65 VRLVSVESQLYKMRRDESMTIKGITTLMSNFLSRNRYYPMMVQLLIGGVDKNGPGIYSLD 124
Query: 170 SEGGRLKGNRFS-VGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVA 228
+ GG ++ R S GSGSP AYGVL+ Y+ +M+V+E +LA RAI++AT RD ASG
Sbjct: 125 AMGGSIEETRISATGSGSPMAYGVLEDQYRENMTVKEGLDLAIRAIHNATKRDSASGENI 184
Query: 229 SVYYVGPTGWKKLSGDDV 246
V + +K+L ++V
Sbjct: 185 DVVVITKEAFKRLDPEEV 202
>PSMB_METTH (O27270) Proteasome beta subunit precursor (EC 3.4.25.1)
(Multicatalytic endopeptidase complex beta subunit)
Length = 210
Score = 130 bits (328), Expect = 3e-30
Identities = 75/195 (38%), Positives = 112/195 (56%), Gaps = 1/195 (0%)
Query: 53 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 112
KGTTT+ K+GV+ A + RASMG I+ ++ KI +I+ ++ T+AG AD Q +
Sbjct: 8 KGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKY 67
Query: 113 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 172
L + L+ + N +IS+ A+ L ANIL+S R V T++ G DE G +Y +D G
Sbjct: 68 LKAEAALYRMRNSEKISIEAAAALAANILHSSRFYPFIVQTLLGGVDENGAKIYSLDPSG 127
Query: 173 GRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASG-GVASVY 231
G + S GSGSP AYGVL+ Y ++ V+EA ++A RAI A RD SG G+
Sbjct: 128 GMIPDKFVSTGSGSPVAYGVLEDRYSDELYVDEAVDVAIRAIKSAMERDTYSGNGILVAT 187
Query: 232 YVGPTGWKKLSGDDV 246
G++ LS +++
Sbjct: 188 VTEEEGFRMLSEEEI 202
>PSMB_ARCFU (Q9P996) Proteasome beta subunit precursor (EC 3.4.25.1)
(Multicatalytic endopeptidase complex beta subunit)
Length = 213
Score = 129 bits (323), Expect = 1e-29
Identities = 75/198 (37%), Positives = 115/198 (57%), Gaps = 1/198 (0%)
Query: 53 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 112
KGTTT+ + K+GV++A + RA+MG +I+S++ KKI +I M T AG D QF R
Sbjct: 10 KGTTTVGLVCKDGVVMATEKRATMGNFIASKAAKKIYQIADRMAMTTAGSVGDAQFLARI 69
Query: 113 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEG 172
+ I+ L+E+ +R+ +V + L +N+L SYR V +I G D G +Y +D G
Sbjct: 70 IKIEANLYEIRRERKPTVRAIATLTSNLLNSYRYFPYLVQLLIGGIDSEGKSIYSIDPIG 129
Query: 173 GRLKGNRF-SVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVY 231
G ++ + GSGS AYGVL+ + ++ V+EA ELA RAIY A RD ASG V
Sbjct: 130 GAIEEKDIVATGSGSLTAYGVLEDRFTPEIGVDEAVELAVRAIYSAMKRDSASGDGIDVV 189
Query: 232 YVGPTGWKKLSGDDVGEL 249
+ + + S ++V ++
Sbjct: 190 KITEDEFYQYSPEEVEQI 207
>PSMB_METJA (Q58634) Proteasome beta subunit precursor (EC 3.4.25.1)
(Multicatalytic endopeptidase complex beta subunit)
Length = 224
Score = 115 bits (289), Expect = 9e-26
Identities = 72/199 (36%), Positives = 110/199 (55%), Gaps = 2/199 (1%)
Query: 53 KGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRN 112
KGTTT+ I + V++A D RAS+G ++ + KK+ +I+ Y+ T+AG D Q R
Sbjct: 5 KGTTTVGLICDDAVILATDKRASLGNLVADKEAKKLYKIDDYIAMTIAGSVGDAQAIVRL 64
Query: 113 LGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWD-ETGPGLYYVDSE 171
L + +L+++ R I + LL+NIL+S R +I G+D G L+ +D
Sbjct: 65 LIAEAKLYKMRTGRNIPPLACATLLSNILHSSRMFPFLTQIIIGGYDLLEGAKLFSLDPL 124
Query: 172 GGRLKGNRF-SVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASV 230
GG + F + GSGSP AYGVL++GY DMSVEE +LA A+ A RD SG S+
Sbjct: 125 GGMNEEKTFTATGSGSPIAYGVLEAGYDRDMSVEEGIKLALNALKSAMERDTFSGNGISL 184
Query: 231 YYVGPTGWKKLSGDDVGEL 249
+ G K +++ ++
Sbjct: 185 AVITKDGVKIFEDEEIEKI 203
>PSMB_PYRHO (O50110) Proteasome beta subunit precursor (EC 3.4.25.1)
(Multicatalytic endopeptidase complex beta subunit)
Length = 207
Score = 113 bits (283), Expect = 4e-25
Identities = 71/201 (35%), Positives = 114/201 (56%), Gaps = 1/201 (0%)
Query: 46 IQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAAD 105
+Q+ + KGTTT+ + K+GV++AAD RAS+G I +++V KI +I+ ++ AG D
Sbjct: 2 LQLTEKFKGTTTVGIVCKDGVVLAADRRASLGNIIYARNVTKIHKIDEHLAIAGAGDVGD 61
Query: 106 CQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGL 165
R L + +L+ + +R+SV + LLANI+ + ++ G+DE P L
Sbjct: 62 ILNLVRLLRAEAKLYYSQSGKRMSVKALATLLANIMNGAKYFPYLAWFLVGGYDEK-PKL 120
Query: 166 YYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASG 225
Y VD GG + + GSG +AY +LDS YK ++++EE +LA +AI A RD SG
Sbjct: 121 YSVDMVGGITEDKYATAGSGMEFAYSILDSEYKDNLTLEEGIKLAVKAINTAIKRDVFSG 180
Query: 226 GVASVYYVGPTGWKKLSGDDV 246
V + G+K+LS ++
Sbjct: 181 DGILVVTITKEGYKELSDSEL 201
>PSMB_PYRAB (Q9V0N9) Proteasome beta subunit precursor (EC 3.4.25.1)
(Multicatalytic endopeptidase complex beta subunit)
Length = 207
Score = 110 bits (276), Expect = 3e-24
Identities = 69/197 (35%), Positives = 109/197 (55%), Gaps = 1/197 (0%)
Query: 46 IQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAAD 105
+Q+ + KGTTT+ + +GV++AAD RAS+G + +++V KI +I+ ++ AG D
Sbjct: 2 LQLTEKFKGTTTVGIVCSDGVVLAADRRASLGNIVYAKNVTKIHKIDEHLAIAGAGDVGD 61
Query: 106 CQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGL 165
R L + +L+ + +R+SV + LLAN+L R + ++ G+DE P L
Sbjct: 62 ILNLVRLLRAEAKLYYAQSGKRMSVKALATLLANMLNGARMLPYLAWFLVGGFDEK-PRL 120
Query: 166 YYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASG 225
Y VD GG + + GSG +AY VLDS Y+ D+ V E ++A AI A RD SG
Sbjct: 121 YSVDMMGGITEDKYVAAGSGMEFAYSVLDSEYREDLKVREGIKIAVEAINSAIKRDVFSG 180
Query: 226 GVASVYYVGPTGWKKLS 242
V + G+++LS
Sbjct: 181 DGIMVVTITEEGYRELS 197
>PSMB_THEAC (P28061) Proteasome beta subunit precursor (EC 3.4.25.1)
(Multicatalytic endopeptidase complex beta subunit)
Length = 211
Score = 108 bits (270), Expect = 1e-23
Identities = 65/194 (33%), Positives = 106/194 (54%), Gaps = 2/194 (1%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTTT+ K+ V++A + R +M +I ++ KK+ +I+ Y T+AG D Q R +
Sbjct: 8 GTTTVGITLKDAVIMATERRVTMENFIMHKNGKKLFQIDTYTGMTIAGLVGDAQVLVRYM 67
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+ L+ L + + + + LL+N+L + M V ++ G D T P ++ +D+ GG
Sbjct: 68 KAELELYRLQRRVNMPIEAVATLLSNMLNQVKYMPYMVQLLVGGID-TAPHVFSIDAAGG 126
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233
++ S GSGSP+ YGVL+S Y M+V+E +L RAI A RD ASGG+ V +
Sbjct: 127 SVEDIYASTGSGSPFVYGVLESQYSEKMTVDEGVDLVIRAISAAKQRDSASGGMIDVAVI 186
Query: 234 -GPTGWKKLSGDDV 246
G+ +L D +
Sbjct: 187 TRKDGYVQLPTDQI 200
>PSMB_PYRFU (Q8U125) Proteasome beta subunit precursor (EC 3.4.25.1)
(Multicatalytic endopeptidase complex beta subunit)
Length = 206
Score = 107 bits (268), Expect = 2e-23
Identities = 69/204 (33%), Positives = 113/204 (54%), Gaps = 1/204 (0%)
Query: 46 IQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAAD 105
+ + + KGTTT+ + KEGV++AAD+RAS+G I +++V KI +I+ ++ AG D
Sbjct: 2 LHLKEKLKGTTTVGLVCKEGVVLAADTRASLGNIIYAKNVTKIHKIDEHLAIAGAGDVGD 61
Query: 106 CQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGL 165
R L + L++ + +SV + LLANIL + ++ G+DE P L
Sbjct: 62 ILNLVRLLKAEANLYKSTVGKEMSVKALATLLANILNGSKYFPYLGWFLVGGYDEK-PRL 120
Query: 166 YYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASG 225
+ VD GG + N + GSG +AY +LDS Y+ +MSV + +LA +AI A RD +G
Sbjct: 121 FSVDMVGGITEDNYAAAGSGMEFAYSILDSEYREEMSVNDGIKLAVKAINVAIKRDVFTG 180
Query: 226 GVASVYYVGPTGWKKLSGDDVGEL 249
V + G+K+ G ++ ++
Sbjct: 181 DGLLVVTITKDGYKEYRGAELEKM 204
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.316 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,431,036
Number of Sequences: 164201
Number of extensions: 1366551
Number of successful extensions: 3651
Number of sequences better than 10.0: 184
Number of HSP's better than 10.0 without gapping: 131
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 3435
Number of HSP's gapped (non-prelim): 187
length of query: 271
length of database: 59,974,054
effective HSP length: 108
effective length of query: 163
effective length of database: 42,240,346
effective search space: 6885176398
effective search space used: 6885176398
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)
Medicago: description of AC141863.8