BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141109.6 - phase: 0
(348 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TCG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA b... 49 1e-05
TCG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA b... 49 2e-05
SSN6_YEAST (P14922) Glucose repression mediator protein 42 0.002
EXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precur... 42 0.002
Z384_RAT (Q9EQJ4) Zinc finger protein 384 (Nuclear matrix transc... 40 0.011
GALY_YEAST (P19659) Transcription regulatory protein GAL11 39 0.025
ZEST_DROME (P09956) Regulatory protein zeste 38 0.043
GTS1_YEAST (P40956) GTS1 protein (LSR1 protein) 38 0.043
FTK1_RALSO (Q8XRH0) DNA translocase ftsK 1 37 0.056
Z384_HUMAN (Q8TF68) Zinc finger protein 384 (Nuclear matrix tran... 37 0.096
LCP1_MOUSE (Q8BU11) Epidermal Langerhans cell protein LCP1 36 0.16
WAS1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family memb... 35 0.28
LCP1_RAT (Q99PM1) Epidermal Langerhans cell protein LCP1 35 0.28
EFG1_CANAL (P43064) Enhanced filamentous growth protein 35 0.28
TRA1_CAEEL (P34708) Sex-determining transformer protein 1 34 0.48
POLR_TYMVC (P28477) RNA replicase polyprotein (EC 2.7.7.48) 34 0.62
HD_HUMAN (P42858) Huntingtin (Huntington's disease protein) (HD ... 34 0.62
CYCK_MOUSE (O88874) Cyclin K 34 0.62
P30_MYCPN (P75330) P30 adhesin (Cytadhesin P30) (30 kDa adhesin-... 33 0.82
ARGJ_BACC1 (P62057) Arginine biosynthesis bifunctional protein a... 33 0.82
>TCG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA
box-binding protein-associated factor 2S) (Transcription
factor CA150) (p144) (Formin-binding protein 28) (FBP
28)
Length = 1100
Score = 49.3 bits (116), Expect = 1e-05
Identities = 41/131 (31%), Positives = 57/131 (43%), Gaps = 15/131 (11%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEA-----SSSTISEWTICADTPTH 67
+ A+AQAQAQ AQAQAQA AQAQ + Q +A + + + + A TPT
Sbjct: 206 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQAVGAPTPTT 265
Query: 68 SAPQHSMPWFPPFTTGE-------ILCPIACEAQMPTHQYVAHVPPPPVRAPLVVMTYSA 120
S+P ++ P +T +A PT Q V P V ++ A
Sbjct: 266 SSPAPAVSTSTPTSTPSSTTATTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSAPA 325
Query: 121 PM---IHTVPQ 128
P + TVPQ
Sbjct: 326 PTATPVQTVPQ 336
Score = 43.9 bits (102), Expect = 6e-04
Identities = 30/119 (25%), Positives = 46/119 (38%), Gaps = 9/119 (7%)
Query: 3 IKMREMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASSSTISEWTICA 62
I+ E+ ++ A+ QAQAQ AQAQAQA AQAQ + Q +A + ++ A
Sbjct: 168 IQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 227
Query: 63 DTPTHSAPQHSMPWFPPFTTGEILCPIACEAQMPTHQYVAHVPPPPVRAPLVVMTYSAP 121
+ Q + +AQ P P +P ++ S P
Sbjct: 228 QAQAQAQAQ---------AQAQAQAQAQAQAQAQVQAQAVGAPTPTTSSPAPAVSTSTP 277
>TCG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA
box-binding protein-associated factor 2S) (Transcription
factor CA150)
Length = 1098
Score = 48.9 bits (115), Expect = 2e-05
Identities = 40/119 (33%), Positives = 52/119 (43%), Gaps = 3/119 (2%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASSSTISEWTICADTPTHSAPQH 72
+ A+AQAQAQ AQAQAQA AQAQ V+ QV+A + S T + P S
Sbjct: 216 QAQAQAQAQAQAQAQAQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTS 275
Query: 73 SMPWFPPFTTGEILCPIACEAQMPTHQYVAHVPPPPVRAPLVVMT---YSAPMIHTVPQ 128
S +T +A PT Q V P V ++ +A + TVPQ
Sbjct: 276 SSTPSSTTSTTTTATSVAQTVSTPTTQDQTPSSAVSVATPTVSVSTPARTATPVQTVPQ 334
Score = 41.6 bits (96), Expect = 0.003
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 3 IKMREMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
I+ E+ ++ A+ QAQAQ AQAQAQA AQAQ + Q +A +
Sbjct: 168 IQQSELTPMLAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 217
Score = 40.0 bits (92), Expect = 0.009
Identities = 20/41 (48%), Positives = 26/41 (62%)
Query: 12 IKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
++ A+AQAQAQ AQAQAQA AQAQ + Q +A +
Sbjct: 183 VQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 223
Score = 39.7 bits (91), Expect = 0.011
Identities = 21/45 (46%), Positives = 27/45 (59%)
Query: 8 MAEVIKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
+A + A+AQAQAQ AQAQAQA AQAQ + Q +A +
Sbjct: 177 LAAQAQVQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 221
Score = 38.9 bits (89), Expect = 0.019
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
+ A+AQAQAQ AQAQAQA AQAQ + Q +A +
Sbjct: 186 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 225
Score = 38.9 bits (89), Expect = 0.019
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
+ A+AQAQAQ AQAQAQA AQAQ + Q +A +
Sbjct: 188 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 227
>SSN6_YEAST (P14922) Glucose repression mediator protein
Length = 966
Score = 42.0 bits (97), Expect = 0.002
Identities = 21/40 (52%), Positives = 26/40 (64%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
+ A+AQAQAQ AQAQAQAHAQAQ + Q +A +
Sbjct: 517 QAQAQAQAQAQAQAQAQAQAHAQAQAQAQAKAQAQAQAQA 556
Score = 39.7 bits (91), Expect = 0.011
Identities = 20/41 (48%), Positives = 26/41 (62%)
Query: 12 IKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
++ A+AQAQAQ AQAQAQA AQAQ + Q +A +
Sbjct: 492 LQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 532
Score = 38.9 bits (89), Expect = 0.019
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
+ A+AQAQAQ AQAQAQA AQAQ + Q +A +
Sbjct: 497 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 536
Score = 38.9 bits (89), Expect = 0.019
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
+ A+AQAQAQ AQAQAQA AQAQ + Q +A +
Sbjct: 495 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 534
Score = 38.5 bits (88), Expect = 0.025
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
+ A+AQAQAQ AQAQAQA AQAQ + Q +A +
Sbjct: 509 QAQAQAQAQAQAQAQAQAQAQAQAQAQAHAQAQAQAQAKA 548
Score = 38.5 bits (88), Expect = 0.025
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
+ A+AQAQAQ AQAQAQA AQAQ Q +A +
Sbjct: 505 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAHAQAQAQA 544
Score = 38.5 bits (88), Expect = 0.025
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 2 QIKMREMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
Q++ + A+ + A+AQAQAQ AQAQAQA AQAQ + Q A +
Sbjct: 491 QLQAQAQAQA-QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAHAQA 540
Score = 38.5 bits (88), Expect = 0.025
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
+ A+AQAQAQ AQAQAQA AQAQ + Q +A +
Sbjct: 507 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAHAQAQAQAQA 546
Score = 38.1 bits (87), Expect = 0.033
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
+ A+AQAQAQ AQAQAQA AQAQ + Q +A +
Sbjct: 511 QAQAQAQAQAQAQAQAQAQAQAQAQAHAQAQAQAQAKAQA 550
Score = 37.4 bits (85), Expect = 0.056
Identities = 19/40 (47%), Positives = 24/40 (59%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
+ A+AQAQAQ AQAQAQA A AQ + Q +A +
Sbjct: 515 QAQAQAQAQAQAQAQAQAQAQAHAQAQAQAQAKAQAQAQA 554
Score = 37.0 bits (84), Expect = 0.074
Identities = 19/40 (47%), Positives = 24/40 (59%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
+ A+AQAQAQ AQAQAQA AQAQ + +A +
Sbjct: 503 QAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAHAQAQA 542
Score = 35.0 bits (79), Expect = 0.28
Identities = 20/51 (39%), Positives = 25/51 (48%)
Query: 2 QIKMREMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
Q + A + A Q QAQ AQAQAQA AQAQ + Q +A +
Sbjct: 474 QTPINSSATMYSNGASPQLQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQA 524
Score = 35.0 bits (79), Expect = 0.28
Identities = 18/37 (48%), Positives = 22/37 (58%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVE 49
+ A+AQAQAQ AQA AQA AQAQ + Q +
Sbjct: 521 QAQAQAQAQAQAQAQAHAQAQAQAQAKAQAQAQAQAQ 557
Score = 33.5 bits (75), Expect = 0.82
Identities = 17/22 (77%), Positives = 18/22 (81%)
Query: 16 AEAQAQAQVLAQAQAQAHAQAQ 37
A+AQAQAQ AQAQAQA AQ Q
Sbjct: 538 AQAQAQAQAKAQAQAQAQAQQQ 559
Score = 30.0 bits (66), Expect = 9.0
Identities = 15/22 (68%), Positives = 17/22 (77%)
Query: 16 AEAQAQAQVLAQAQAQAHAQAQ 37
A+AQAQA+ AQAQAQA Q Q
Sbjct: 540 AQAQAQAKAQAQAQAQAQQQQQ 561
>EXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor
(PELP)
Length = 426
Score = 42.0 bits (97), Expect = 0.002
Identities = 27/109 (24%), Positives = 45/109 (40%), Gaps = 2/109 (1%)
Query: 29 QAQAHAQAQVPPPPPVRTQVEASSSTISEWTICADTPTHSAPQHSMPWFPPFTTGEILCP 88
+A + + A+ PPPPP + + S T P + +P PP ++ P
Sbjct: 187 KAPSPSPAKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLLPPPPPVAYPPVMTP 246
Query: 89 IACEAQMPTHQYVAHVPPPPVRAPLVVMTYSAPMIHTVPQIEEPIFHSG 137
A P +A P PP PL+ + P++ +P + +P SG
Sbjct: 247 SPSPAAEPP--IIAPFPSPPANPPLIPRRPAPPVVKPLPPLGKPPIVSG 293
>Z384_RAT (Q9EQJ4) Zinc finger protein 384 (Nuclear matrix
transcription factor 4) (Cas-associated zinc finger
protein)
Length = 579
Score = 39.7 bits (91), Expect = 0.011
Identities = 24/47 (51%), Positives = 26/47 (55%), Gaps = 13/47 (27%)
Query: 9 AEVIKTMAEAQAQAQVLAQAQAQAHAQAQV-------------PPPP 42
A V + A+AQAQAQ AQAQAQA AQAQ PPPP
Sbjct: 472 AAVAQAQAQAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQPPPP 518
Score = 36.6 bits (83), Expect = 0.096
Identities = 19/48 (39%), Positives = 28/48 (57%)
Query: 7 EMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASSST 54
++ + ++ A A A AQ AQAQAQA AQAQ + Q +AS ++
Sbjct: 460 DLQQQVQAAAAAAAVAQAQAQAQAQAQAQAQAQAQAQAQAQAQASQAS 507
Score = 35.8 bits (81), Expect = 0.16
Identities = 23/67 (34%), Positives = 28/67 (41%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASSSTISEWTICADTPTHSAPQH 72
+ A A A A AQAQAQA AQAQ + Q +A +S S+ P P
Sbjct: 464 QVQAAAAAAAVAQAQAQAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQPPPPQPPHF 523
Query: 73 SMPWFPP 79
P P
Sbjct: 524 QSPGAAP 530
>GALY_YEAST (P19659) Transcription regulatory protein GAL11
Length = 1081
Score = 38.5 bits (88), Expect = 0.025
Identities = 25/73 (34%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 4 KMREMAEVIKTMAEAQAQAQVLAQAQAQAH----AQAQVPPPPPVRTQVEASSSTISEWT 59
K+ +M + + A+AQAQAQ AQAQAQA AQAQ + Q +A + ++
Sbjct: 413 KLYQMQQQQQAQAQAQAQAQAQAQAQAQAQAAQAAQAQAQAQAQAQAQAQAQAQAQAQAQ 472
Query: 60 ICADTPTHSAPQH 72
A + QH
Sbjct: 473 AQAQAQAQAHAQH 485
Score = 37.7 bits (86), Expect = 0.043
Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQ 47
+ A+AQAQAQ AQAQAQAHAQ Q P P + Q
Sbjct: 462 QAQAQAQAQAQAQAQAQAQAHAQHQ-PSQQPQQAQ 495
Score = 37.4 bits (85), Expect = 0.056
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASSSTISEWTICADTPTHSAPQH 72
+ A+AQAQA AQAQAQA AQAQ + Q +A + ++ A PQ
Sbjct: 434 QAQAQAQAQAAQAAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQAHAQHQPSQQPQQ 493
Query: 73 S 73
+
Sbjct: 494 A 494
Score = 35.4 bits (80), Expect = 0.21
Identities = 18/44 (40%), Positives = 26/44 (58%)
Query: 9 AEVIKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
+++ + + QAQAQ AQAQAQA AQAQ + Q +A +
Sbjct: 412 SKLYQMQQQQQAQAQAQAQAQAQAQAQAQAQAAQAAQAQAQAQA 455
>ZEST_DROME (P09956) Regulatory protein zeste
Length = 574
Score = 37.7 bits (86), Expect = 0.043
Identities = 22/50 (44%), Positives = 29/50 (58%)
Query: 2 QIKMREMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEAS 51
QI + + + A+AQAQAQ AQAQAQA AQAQ + Q+ A+
Sbjct: 338 QITLAQYQAQQQQQAQAQAQAQAQAQAQAQAQAQAQAQAQQLAQQQLAAA 387
Score = 33.9 bits (76), Expect = 0.62
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 18 AQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASSSTISEWTICA 62
AQ QAQ QAQAQA AQAQ + Q +A + +++ + A
Sbjct: 342 AQYQAQQQQQAQAQAQAQAQAQAQAQAQAQAQAQAQQLAQQQLAA 386
Score = 32.7 bits (73), Expect = 1.4
Identities = 19/55 (34%), Positives = 24/55 (43%)
Query: 17 EAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASSSTISEWTICADTPTHSAPQ 71
+ QAQAQ AQAQAQA AQAQ + + + + A H Q
Sbjct: 349 QQQAQAQAQAQAQAQAQAQAQAQAQAQAQQLAQQQLAAAQHQQLAAAVQVHHQQQ 403
Score = 31.2 bits (69), Expect = 4.0
Identities = 16/37 (43%), Positives = 24/37 (64%)
Query: 1 MQIKMREMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQ 37
+++ +++E+ + E Q Q Q AQAQAQA AQAQ
Sbjct: 195 IEMDANDVSEIDEDPMEQQQQQQQEAQAQAQAQAQAQ 231
>GTS1_YEAST (P40956) GTS1 protein (LSR1 protein)
Length = 396
Score = 37.7 bits (86), Expect = 0.043
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 1 MQIKMREMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQ 37
MQ + ++ ++ A+AQAQAQ AQ QAQA AQAQ
Sbjct: 318 MQQQQQQQQQLAVAQAQAQAQAQAQAQVQAQAQAQAQ 354
Score = 37.4 bits (85), Expect = 0.056
Identities = 19/25 (76%), Positives = 21/25 (84%)
Query: 13 KTMAEAQAQAQVLAQAQAQAHAQAQ 37
+ A+AQAQAQV AQAQAQA AQAQ
Sbjct: 334 QAQAQAQAQAQVQAQAQAQAQAQAQ 358
Score = 37.0 bits (84), Expect = 0.074
Identities = 19/36 (52%), Positives = 24/36 (65%)
Query: 2 QIKMREMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQ 37
Q + ++ V + A+AQAQAQ QAQAQA AQAQ
Sbjct: 321 QQQQQQQLAVAQAQAQAQAQAQAQVQAQAQAQAQAQ 356
Score = 35.4 bits (80), Expect = 0.21
Identities = 18/37 (48%), Positives = 25/37 (66%)
Query: 1 MQIKMREMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQ 37
M ++ ++ + +A+AQAQAQ AQAQ QA AQAQ
Sbjct: 316 MAMQQQQQQQQQLAVAQAQAQAQAQAQAQVQAQAQAQ 352
Score = 35.0 bits (79), Expect = 0.28
Identities = 19/43 (44%), Positives = 25/43 (57%)
Query: 5 MREMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQ 47
M++ + + +A AQAQAQ AQAQAQ AQAQ + Q
Sbjct: 318 MQQQQQQQQQLAVAQAQAQAQAQAQAQVQAQAQAQAQAQAQAQ 360
Score = 31.6 bits (70), Expect = 3.1
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 2 QIKMREMAEVIKTMAEAQAQAQVLAQAQAQAHAQ 35
Q+ + + + A+AQ QAQ AQAQAQA AQ
Sbjct: 327 QLAVAQAQAQAQAQAQAQVQAQAQAQAQAQAQAQ 360
Score = 31.2 bits (69), Expect = 4.0
Identities = 17/38 (44%), Positives = 21/38 (54%)
Query: 15 MAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASS 52
M + Q Q Q LA AQAQA AQAQ + Q +A +
Sbjct: 318 MQQQQQQQQQLAVAQAQAQAQAQAQAQVQAQAQAQAQA 355
>FTK1_RALSO (Q8XRH0) DNA translocase ftsK 1
Length = 959
Score = 37.4 bits (85), Expect = 0.056
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 16/120 (13%)
Query: 16 AEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQV-EASSSTISEWTICADTPTHSAPQHSM 74
AEA+ +A+ A+A+A+A +A+ P P V + EA ++T +E + A P +
Sbjct: 359 AEAEPEAEAEAEAEAEAEPEAEAPAPESVAPALQEAEAATAAEAPLPAPEPAPAIEADDA 418
Query: 75 PWFPPFTTGE---ILCPI--------ACEAQMPTHQYVAHVPPPPVRAPLVVMTYSAPMI 123
PP + I+ P A A P VA PP P R V+ Y P +
Sbjct: 419 APPPPAVPAQKPRIVLPAVVGQVVSNAMPAPAPAAAPVAAAPPAPPR----VVDYRLPNV 474
>Z384_HUMAN (Q8TF68) Zinc finger protein 384 (Nuclear matrix
transcription factor 4) (CAG repeat protein 1)
Length = 576
Score = 36.6 bits (83), Expect = 0.096
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 7 EMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQ 37
+ A +A+AQAQAQ AQAQAQA AQAQ
Sbjct: 465 QAAAAAAAVAQAQAQAQAQAQAQAQAQAQAQ 495
Score = 33.5 bits (75), Expect = 0.82
Identities = 22/48 (45%), Positives = 24/48 (49%), Gaps = 15/48 (31%)
Query: 9 AEVIKTMAEAQAQAQVLAQAQAQAHA---------------QAQVPPP 41
A V + A+AQAQAQ AQAQAQA A Q Q PPP
Sbjct: 471 AAVAQAQAQAQAQAQAQAQAQAQAQASQASQQQQQQQQQQQQQQQPPP 518
Score = 33.5 bits (75), Expect = 0.82
Identities = 17/21 (80%), Positives = 18/21 (84%)
Query: 16 AEAQAQAQVLAQAQAQAHAQA 36
A+AQAQAQ AQAQAQA AQA
Sbjct: 476 AQAQAQAQAQAQAQAQAQAQA 496
Score = 32.0 bits (71), Expect = 2.4
Identities = 19/48 (39%), Positives = 28/48 (57%), Gaps = 6/48 (12%)
Query: 7 EMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASSST 54
++ + ++ A A A AQ AQAQAQA AQAQ + Q +AS ++
Sbjct: 459 DLQQQVQAAAAAAAVAQAQAQAQAQAQAQAQ------AQAQAQASQAS 500
>LCP1_MOUSE (Q8BU11) Epidermal Langerhans cell protein LCP1
Length = 619
Score = 35.8 bits (81), Expect = 0.16
Identities = 51/224 (22%), Positives = 83/224 (36%), Gaps = 27/224 (12%)
Query: 12 IKTMAEAQAQAQVLAQAQAQAHAQAQVPPP--PPVRTQVEASSSTISEWTICADTPTHSA 69
I+ +AQ + + QA A A A Q+PPP P Q T + TI P A
Sbjct: 410 IQPSQQAQIVTRSVLQAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQA 469
Query: 70 PQHSMP--------WFPPFTTGEILCPIACEAQMPTHQYVAHVPPPPVRAPLVVMTYSAP 121
Q P PP +I+ P PT + V PP V + S+P
Sbjct: 470 MQQPPPQKVRINLQQQPPPLQSKIVPP-------PTLKIQTTVVPPTVESSPEQPMNSSP 522
Query: 122 MIHTVPQIEEPIFHSGNMEVCDRVND-LQEKYDELQRDMRALRGKEKFGKTAYDLCLVLN 180
HTV + +C+ + D + E Q D+ + G + C+
Sbjct: 523 EAHTVEA-------TSPETICEMIADVVPEVESPSQMDVELVSG-SPVALSPQPRCVRSG 574
Query: 181 VQIPHKFKVPYFEKYKGNSCPEEHLK-MYVRRMSTYARNDQVFI 223
+ P + +Y N C +H + +++ +++ N VF+
Sbjct: 575 CENPPVVSKDWDNEYCSNECVVKHCRDVFLAWVASRNPNSVVFV 618
>WAS1_HUMAN (Q92558) Wiskott-Aldrich syndrome protein family member
1 (WASP-family protein member 1) (Verprolin homology
domain-containing protein 1)
Length = 559
Score = 35.0 bits (79), Expect = 0.28
Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 11/93 (11%)
Query: 39 PPPPPVRTQVEASSSTISEWTICADTPTHSAPQHSMPWFPPFTTGEILCPIACEAQMPTH 98
PPPPP+ + + SS S TP P P PP T + A +
Sbjct: 326 PPPPPLPSALSTSSLRAS----MTSTPPPPVPP---PPPPPATALQAPAVPPPPAPLQIA 378
Query: 99 QYVAHVPPPPVRAPLV----VMTYSAPMIHTVP 127
V H PPP+ PLV + +AP+ TVP
Sbjct: 379 PGVLHPAPPPIAPPLVQPSPPVARAAPVCETVP 411
Score = 31.6 bits (70), Expect = 3.1
Identities = 28/111 (25%), Positives = 39/111 (34%), Gaps = 9/111 (8%)
Query: 39 PPPPPVRTQVEASSSTISEWT-ICADTPTHSAPQHSMPWFPPFTTGEILCPIACEAQMP- 96
P PPP+ + S ++ +C P H PQ + PP L P P
Sbjct: 384 PAPPPIAPPLVQPSPPVARAAPVCETVPVHPLPQGEVQGLPPPPPPPPLPPPGIRPSSPV 443
Query: 97 THQYVAHVP------PPPVRAPLVVMTYSAPMIHTVPQIEEPIFHSGNMEV 141
T +AH P P P V + +P +P EP H + V
Sbjct: 444 TVTALAHPPSGLHPTPSTAPGPHVPLMPPSPPSQVIP-ASEPKRHPSTLPV 493
>LCP1_RAT (Q99PM1) Epidermal Langerhans cell protein LCP1
Length = 619
Score = 35.0 bits (79), Expect = 0.28
Identities = 49/206 (23%), Positives = 74/206 (35%), Gaps = 26/206 (12%)
Query: 12 IKTMAEAQAQAQVLAQAQAQAHAQAQVPPP--PPVRTQVEASSSTISEWTICADTPTHSA 69
I+ +AQ + + QA A A A Q+PPP P Q T + TI P A
Sbjct: 410 IQPSQQAQIATRSVLQAAAAAAASMQLPPPRLQPPPLQQMPQPPTQQQVTILQQPPPLQA 469
Query: 70 PQHSMP--------WFPPFTTGEILCPIACEAQMPTHQYVAHVPPPPVRAPLVVMTYSAP 121
Q P PP +I+ P A + Q A V PP V + S+P
Sbjct: 470 MQQPPPQKVRINLQQQPPPLQSKIVPPPALKMQ-------ATVLPPTVESSPEQPMNSSP 522
Query: 122 MIHTVPQIEEPIFHSGNMEVCDRVND-LQEKYDELQRDMRALRGKEKFGKTAYDLCLVLN 180
HTV + +C+ + D + E Q D+ + G + C+
Sbjct: 523 EAHTVEA-------TSPETICEMIADVVPEVESPSQMDVELVSG-SPVTLSPQPRCVRSG 574
Query: 181 VQIPHKFKVPYFEKYKGNSCPEEHLK 206
+ P + +Y N C +H +
Sbjct: 575 CENPPVISKDWDNEYCSNECVVKHCR 600
>EFG1_CANAL (P43064) Enhanced filamentous growth protein
Length = 552
Score = 35.0 bits (79), Expect = 0.28
Identities = 18/53 (33%), Positives = 26/53 (48%)
Query: 5 MREMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASSSTISE 57
+R++ VI+T A A A A A A PPPPPV +++ IS+
Sbjct: 300 VRDIKRVIQTGVTPNAAAATAAAAATATSASAPPPPPPPVAAATTTAATAISK 352
>TRA1_CAEEL (P34708) Sex-determining transformer protein 1
Length = 1110
Score = 34.3 bits (77), Expect = 0.48
Identities = 31/118 (26%), Positives = 45/118 (37%), Gaps = 12/118 (10%)
Query: 2 QIKMREMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPPVRTQVEASSSTISEWT-- 59
Q+ M + + A AQ QAQV QA QAHA Q ++ + + S +S ++
Sbjct: 469 QMLQTHMMQQAQIQAAAQMQAQVQHQAAMQAHAMQQA--QMVLQNNLLGAQSLLSPFSPL 526
Query: 60 --------ICADTPTHSAPQHSMPWFPPFTTGEILCPIACEAQMPTHQYVAHVPPPPV 109
+ A T P P F T+ + P+ P A VP PV
Sbjct: 527 LPPSRAPNVMAMLQTPPTPTSVAPMFDIMTSRAPMAPVVSAPTAPAPLVPAPVPASPV 584
>POLR_TYMVC (P28477) RNA replicase polyprotein (EC 2.7.7.48)
Length = 1844
Score = 33.9 bits (76), Expect = 0.62
Identities = 31/101 (30%), Positives = 41/101 (39%), Gaps = 23/101 (22%)
Query: 32 AHAQAQVPPPPPVRTQVEASSSTISEWTICADTPTHSAPQHSMPWFPPFTTGEILCPIAC 91
A A VP PPP + A T + PT A Q+S +A
Sbjct: 595 AFASTFVPRPPPAASSPGAQPPTTTAAPPTPIEPTQRAHQNS--------------DLAL 640
Query: 92 EAQMPTHQYVAHVPPPPVRAPLVVMTYSAPMIHTVPQIEEP 132
E+ T PPPP+R+P MT SAP++ P+I P
Sbjct: 641 ESSTSTEP-----PPPPIRSP--DMTPSAPVL--FPEINSP 672
>HD_HUMAN (P42858) Huntingtin (Huntington's disease protein) (HD
protein)
Length = 3144
Score = 33.9 bits (76), Expect = 0.62
Identities = 16/40 (40%), Positives = 21/40 (52%)
Query: 4 KMREMAEVIKTMAEAQAQAQVLAQAQAQAHAQAQVPPPPP 43
K+ + E +K+ + Q Q Q Q Q Q Q Q PPPPP
Sbjct: 6 KLMKAFESLKSFQQQQQQQQQQQQQQQQQQQQQQQPPPPP 45
>CYCK_MOUSE (O88874) Cyclin K
Length = 554
Score = 33.9 bits (76), Expect = 0.62
Identities = 26/99 (26%), Positives = 35/99 (35%), Gaps = 15/99 (15%)
Query: 21 QAQVLAQAQAQAHAQAQVPPPPPVRTQVEASSSTISEWTICADTPTHSAPQHSMPWFPPF 80
QA+ + +A PPPPP ++EA+ + P H P P P
Sbjct: 333 QAKRAVVVSPKEENKATEPPPPPKIPKLEATHPPL--------PPAHPPPDRKPPLAPAL 384
Query: 81 TTGEILCPI------ACEAQMPTHQYVAHVPPP-PVRAP 112
E P+ + P H H PPP P R P
Sbjct: 385 GEAEATGPVETSDLPKVQIPPPAHPAPVHQPPPLPHRPP 423
>P30_MYCPN (P75330) P30 adhesin (Cytadhesin P30) (30 kDa
adhesin-related protein)
Length = 274
Score = 33.5 bits (75), Expect = 0.82
Identities = 34/121 (28%), Positives = 53/121 (43%), Gaps = 16/121 (13%)
Query: 4 KMREMAEVIKTMAEAQAQAQVLAQ-AQAQAHAQAQVPPPP-----PVRTQVEASSSTISE 57
+ ++AE ++ ++ Q + Q L Q A A+AHA+A+V P P P + QV+ + +
Sbjct: 113 RQEQLAEQLQRISAQQEEQQALEQQAAAEAHAEAEVEPAPQPVPVPPQPQVQINFGPRTG 172
Query: 58 WTICADTPTHSAPQHSMPWFPPFTTGEILCP---IACEAQMPTHQYVA---HVPPPPVRA 111
+ AP+ MP P P +A MP H +A PP P A
Sbjct: 173 F----PPQPGMAPRPGMPPHPGMAPRPGFPPQPGMAPRPGMPPHPGMAPRPGFPPQPGMA 228
Query: 112 P 112
P
Sbjct: 229 P 229
>ARGJ_BACC1 (P62057) Arginine biosynthesis bifunctional protein argJ
[Includes: Glutamate N-acetyltransferase (EC 2.3.1.35)
(Ornithine acetyltransferase) (Ornithine transacetylase)
(OATase); Amino-acid acetyltransferase (EC 2.3.1.1)
(N-acetylglutamate syn
Length = 407
Score = 33.5 bits (75), Expect = 0.82
Identities = 32/89 (35%), Positives = 42/89 (46%), Gaps = 19/89 (21%)
Query: 83 GEILC--PIACEAQMPTHQYVAHVPPPPVRAPLVVMTYSAPMIHTVPQIEEPIFHSGNME 140
G I+C P +C A T+Q A APL V S I T +++ I +SGN
Sbjct: 38 GAIVCDTPASCAAVYTTNQIQA--------APLQVTKDS---IATEGKLQAIIVNSGNAN 86
Query: 141 VCDRVNDLQEKYDELQRDMRALRGKEKFG 169
C + LQ+ Y +MRAL G E FG
Sbjct: 87 ACTGMKGLQDAY-----EMRAL-GAEHFG 109
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.319 0.130 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,095,133
Number of Sequences: 164201
Number of extensions: 1791262
Number of successful extensions: 7379
Number of sequences better than 10.0: 81
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 6948
Number of HSP's gapped (non-prelim): 275
length of query: 348
length of database: 59,974,054
effective HSP length: 111
effective length of query: 237
effective length of database: 41,747,743
effective search space: 9894215091
effective search space used: 9894215091
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Medicago: description of AC141109.6