BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141106.8 - phase: 0
(337 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
TAS_ECOLI (Q46933) Tas protein 218 2e-56
ALKE_BABBO (P40690) Aldo-keto reductase (Fragment) 147 3e-35
YAJO_ECOLI (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-) 115 2e-25
KVB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subun... 97 6e-20
KVB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subun... 97 6e-20
KVB2_XENLA (Q9PTM5) Voltage-gated potassium channel beta-2 subun... 97 7e-20
YGHZ_ECOLI (Q46851) Hypothetical protein yghZ 96 1e-19
YGHZ_ECO57 (Q8X529) Hypothetical protein yghZ 96 2e-19
KVB2_BOVIN (Q27955) Voltage-gated potassium channel beta-2 subun... 95 2e-19
KVB2_HUMAN (Q13303) Voltage-gated potassium channel beta-2 subun... 95 3e-19
KVB1_RAT (P63144) Voltage-gated potassium channel beta-1 subunit... 95 3e-19
KVB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subun... 95 3e-19
KVB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subun... 95 3e-19
KVB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subun... 94 5e-19
KVB2_RAT (P62483) Voltage-gated potassium channel beta-2 subunit... 93 8e-19
KVB2_MOUSE (P62482) Voltage-gated potassium channel beta-2 subun... 93 8e-19
GS69_BACSU (P80874) General stress protein 69 (GSP69) 87 6e-17
YQKF_BACSU (P54569) Hypothetical oxidoreductase yqkF (EC 1.-.-.-) 87 8e-17
IOLS_BACSU (P46336) IolS protein (Vegetative protein 147) (VEG147) 86 1e-16
YCCK_BACSU (P46905) Hypothetical oxidoreductase yccK (EC 1.-.-.-) 85 2e-16
>TAS_ECOLI (Q46933) Tas protein
Length = 346
Score = 218 bits (554), Expect = 2e-56
Identities = 120/254 (47%), Positives = 166/254 (65%), Gaps = 5/254 (1%)
Query: 48 NLNVSRLCLGTMTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
+L VS L LGTMTFGEQN+ + + LD A GIN D AEMYPVP R +T G++E Y
Sbjct: 10 SLEVSTLGLGTMTFGEQNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYV 69
Query: 108 GHWI-KHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYID 166
G+W+ KH + R++L+IA+KV+GPS ++LD NI +A+ +SL R+Q DY+D
Sbjct: 70 GNWLAKHGS--REKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLD 127
Query: 167 LYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLM 226
LYQ+HWP R FG+ Y ++S+ + LDAL+ GKIRYIG+SNET +G+M
Sbjct: 128 LYQVHWPQRPTNCFGKLGYSWTDSAPAVSLLDTLDALAEYQRAGKIRYIGVSNETAFGVM 187
Query: 227 KFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGILSGKYF 286
+++ +A+K P+IV++QN YSLL R+F+ +AE E + LLAYS L G L+GKY
Sbjct: 188 RYLHLADK-HDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLAYSCLGFGTLTGKYL 246
Query: 287 SHGNGPADARLNLF 300
+G PA AR LF
Sbjct: 247 -NGAKPAGARNTLF 259
>ALKE_BABBO (P40690) Aldo-keto reductase (Fragment)
Length = 285
Score = 147 bits (372), Expect = 3e-35
Identities = 83/196 (42%), Positives = 119/196 (60%), Gaps = 11/196 (5%)
Query: 120 RLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDLYQIHWPDRYVPM 179
++VIATKVA S ++W+R G L NI +A+D SL R+ DYIDL Q+HWPDRYVPM
Sbjct: 2 KVVIATKVASRSSHLSWLRSGDCKLSKDNILKAVDGSLSRLNTDYIDLLQLHWPDRYVPM 61
Query: 180 -----FGETEYDPVQQY--SSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMKFIQVA 232
F E +D +S+ +++QLDAL + GKIR+ GLSNETP+G ++F ++A
Sbjct: 62 NANGDFHEVFHDTENMIDENSVPLEDQLDALQTLLTQGKIRHWGLSNETPWGTLRFYKLA 121
Query: 233 EKSSSYPKIVSLQNSYSLLCRT-FDSAMAECCHQES--ISLLAYSPLAMGILSGKYFSHG 289
K + S+Q Y+LLCR + E C ++ I++LAY+PLA GIL+GKY +
Sbjct: 122 -KQAGVAAPASVQLHYNLLCRNEVEKGFVELCRPQNTGIAILAYAPLAGGILTGKYLEYM 180
Query: 290 NGPADARLNLFKGLLT 305
+ RL F ++
Sbjct: 181 DPTTSGRLLRFPSYMS 196
>YAJO_ECOLI (P77735) Hypothetical oxidoreductase yajO (EC 1.-.-.-)
Length = 324
Score = 115 bits (288), Expect = 2e-25
Identities = 82/243 (33%), Positives = 127/243 (51%), Gaps = 40/243 (16%)
Query: 48 NLNVSRLCLGTMTFGEQNTLSQSFQLLDE--------AYHAGINFFDSAEMYPVPQRAQT 99
+L VSRLCLG MTFGE + + ++ L +E A GINFFD+A Y +
Sbjct: 10 DLRVSRLCLGCMTFGEPDRGNHAWTLPEESSRPIIKRALEGGINFFDTANSY-------S 62
Query: 100 WGMSEEYFGHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLR 159
G SEE G ++ R+ +V+ATKV G + P+ L I ++ID+SL R
Sbjct: 63 DGSSEEIVGRALRDF-ARREDVVVATKVFHRVGDL------PEGLSRAQILRSIDDSLRR 115
Query: 160 MQLDYIDLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSN 219
+ +DY+D+ QIH D P I+E L+AL+ V GK RYIG S+
Sbjct: 116 LGMDYVDILQIHRWDYNTP-----------------IEETLEALNDVVKAGKARYIGASS 158
Query: 220 ETPYGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMG 279
+ +++ +K + + VS+Q+ Y+L+ R + M C+QE ++++ +SPLA G
Sbjct: 159 MHASQFAQALEL-QKQHGWAQFVSMQDHYNLIYREEEREMLPLCYQEGVAVIPWSPLARG 217
Query: 280 ILS 282
L+
Sbjct: 218 RLT 220
>KVB1_RABIT (Q9XT31) Voltage-gated potassium channel beta-1 subunit
(K(+) channel beta-1 subunit) (Kv-beta-1)
Length = 419
Score = 97.1 bits (240), Expect = 6e-20
Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 37/265 (13%)
Query: 39 GVPVFNLAPN-LNVSRLCLGT-MTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQR 96
G+P NL + L VS L LGT +TFG Q + + +L+ AY +G+N FD+AE+Y
Sbjct: 88 GMPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA--- 144
Query: 97 AQTWGMSEEYFGHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNS 156
G +E G IK + R LVI TK+ G+ RG L +I + + S
Sbjct: 145 ----GKAEVILGSIIKKKGWRRSSLVITTKLYW-GGKAETERG----LSRKHIIEGLKGS 195
Query: 157 LLRMQLDYIDLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIG 216
L R+QL+Y+D+ + PD PM +E + A++ +N G Y G
Sbjct: 196 LQRLQLEYVDVVFANRPDSNTPM-----------------EEIVRAMTHVINQGMAMYWG 238
Query: 217 LSNETPYGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRT-FDSAMAECCHQESISLLAYSP 275
S + +M+ VA + + P + Q Y L R + + E H+ + + +SP
Sbjct: 239 TSRWSAMEIMEAYSVARQFNMIPPVCE-QAEYHLFQREKVEVQLPELYHKIGVGAMTWSP 297
Query: 276 LAMGILSGKYFSHGNG-PADARLNL 299
LA GI+SGKY GNG P +R +L
Sbjct: 298 LACGIISGKY---GNGVPESSRASL 319
>KVB1_HUMAN (Q14722) Voltage-gated potassium channel beta-1 subunit
(K(+) channel beta-1 subunit) (Kv-beta-1)
Length = 419
Score = 97.1 bits (240), Expect = 6e-20
Identities = 85/265 (32%), Positives = 128/265 (48%), Gaps = 37/265 (13%)
Query: 39 GVPVFNLAPN-LNVSRLCLGT-MTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQR 96
G+P NL + L VS L LGT +TFG Q + + +L+ AY +G+N FD+AE+Y
Sbjct: 88 GMPHRNLGKSGLRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA--- 144
Query: 97 AQTWGMSEEYFGHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNS 156
G +E G IK + R LVI TK+ G+ RG L +I + + S
Sbjct: 145 ----GKAEVILGSIIKKKGWRRSSLVITTKLYW-GGKAETERG----LSRKHIIEGLKGS 195
Query: 157 LLRMQLDYIDLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIG 216
L R+QL+Y+D+ + PD PM +E + A++ +N G Y G
Sbjct: 196 LQRLQLEYVDVVFANRPDSNTPM-----------------EEIVRAMTHVINQGMAMYWG 238
Query: 217 LSNETPYGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRT-FDSAMAECCHQESISLLAYSP 275
S + +M+ VA + + P + Q Y L R + + E H+ + + +SP
Sbjct: 239 TSRWSAMEIMEAYSVARQFNMIPPVCE-QAEYHLFQREKVEVQLPELYHKIGVGAMTWSP 297
Query: 276 LAMGILSGKYFSHGNG-PADARLNL 299
LA GI+SGKY GNG P +R +L
Sbjct: 298 LACGIISGKY---GNGVPESSRASL 319
>KVB2_XENLA (Q9PTM5) Voltage-gated potassium channel beta-2 subunit
(K(+) channel beta-2 subunit) (Kv-beta-2)
Length = 367
Score = 96.7 bits (239), Expect = 7e-20
Identities = 80/252 (31%), Positives = 117/252 (45%), Gaps = 32/252 (12%)
Query: 49 LNVSRLCLGT-MTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
L VS L LGT +TFG Q T + QL+ AY GIN FD+AE+Y G +E
Sbjct: 47 LRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAA-------GKAEVVL 99
Query: 108 GHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDL 167
G+ IK + R LVI TK+ G+ RG L +I + + SL R+QLDY+D+
Sbjct: 100 GNIIKKKGWRRSSLVITTKIFW-GGKAETERG----LSRKHIIEGLKASLERLQLDYVDV 154
Query: 168 YQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMK 227
+ PD PM +E + A++ +N G Y G S + +M+
Sbjct: 155 VFANRPDPNTPM-----------------EETVRAMTHVINQGMAMYWGTSRWSSMEIME 197
Query: 228 FIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGILSGKYFS 287
VA + + P I + + + E H+ + + +SPLA GI+SGKY
Sbjct: 198 AYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKY-- 255
Query: 288 HGNGPADARLNL 299
G P +R +L
Sbjct: 256 DGGIPPYSRASL 267
>YGHZ_ECOLI (Q46851) Hypothetical protein yghZ
Length = 346
Score = 95.9 bits (237), Expect = 1e-19
Identities = 83/273 (30%), Positives = 126/273 (45%), Gaps = 43/273 (15%)
Query: 49 LNVSRLCLGTM-TFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
L + L LG FG N L +L +A+ GI FD A Y P G +EE F
Sbjct: 23 LRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPP-----GSAEENF 77
Query: 108 GHWIKHRNIP-RDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYID 166
G ++ RD L+I+TK + GG + + ++D SL RM L+Y+D
Sbjct: 78 GRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKY----LLASLDQSLKRMGLEYVD 133
Query: 167 LYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLM 226
++ H D PM +E AL+ AV GK Y+G+S+ +P
Sbjct: 134 IFYSHRVDENTPM-----------------EETASALAHAVQSGKALYVGISSYSPERTQ 176
Query: 227 KFIQVAEKSSSYPKIVSLQNSYSLLCRTFD-SAMAECCHQESISLLAYSPLAMGILSGKY 285
K +++ + P ++ Q SY+LL R D S + + + +A++PLA G+L+GKY
Sbjct: 177 KMVELL-REWKIPLLIH-QPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKY 234
Query: 286 FSHGNG-PADARL----NLFKGL----LTHCNI 309
NG P D+R+ N +GL LT N+
Sbjct: 235 L---NGIPQDSRMHREGNKVRGLTPKMLTEANL 264
>YGHZ_ECO57 (Q8X529) Hypothetical protein yghZ
Length = 346
Score = 95.5 bits (236), Expect = 2e-19
Identities = 83/273 (30%), Positives = 126/273 (45%), Gaps = 43/273 (15%)
Query: 49 LNVSRLCLGTM-TFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
L + L LG FG N L +L +A+ GI FD A Y P G +EE F
Sbjct: 23 LRLPALSLGLWHNFGHVNALESQRAILRKAFDLGITHFDLANNYGPPP-----GSAEENF 77
Query: 108 GHWIKHRNIP-RDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYID 166
G ++ RD L+I+TK + GG + + ++D SL RM L+Y+D
Sbjct: 78 GRLLREDFAAYRDELIISTKAGYDMWPGPYGSGGSRKY----LLASLDQSLKRMGLEYVD 133
Query: 167 LYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLM 226
++ H D PM +E AL+ AV GK Y+G+S+ +P
Sbjct: 134 IFYSHRVDENTPM-----------------EETASALAHAVQSGKALYVGISSYSPERTQ 176
Query: 227 KFIQVAEKSSSYPKIVSLQNSYSLLCRTFD-SAMAECCHQESISLLAYSPLAMGILSGKY 285
K +++ + P ++ Q SY+LL R D S + + + +A++PLA G+L+GKY
Sbjct: 177 KMVELLHE-WKIPLLIH-QPSYNLLNRWVDKSGLLDTLQNNGVGCIAFTPLAQGLLTGKY 234
Query: 286 FSHGNG-PADARL----NLFKGL----LTHCNI 309
NG P D+R+ N +GL LT N+
Sbjct: 235 L---NGIPEDSRMHREGNKVRGLTPKMLTEANL 264
>KVB2_BOVIN (Q27955) Voltage-gated potassium channel beta-2 subunit
(K(+) channel beta-2 subunit) (Kv-beta-2)
Length = 367
Score = 95.1 bits (235), Expect = 2e-19
Identities = 76/240 (31%), Positives = 112/240 (46%), Gaps = 30/240 (12%)
Query: 49 LNVSRLCLGT-MTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
L VS L LGT +TFG Q T + QL+ AY GIN FD+AE+Y G +E
Sbjct: 47 LRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAA-------GKAEVVL 99
Query: 108 GHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDL 167
G+ IK + R LVI TK+ G+ RG L +I + + SL R+QL+Y+D+
Sbjct: 100 GNIIKKKGWRRSSLVITTKIFW-GGKAETERG----LSRKHIIEGLKASLERLQLEYVDV 154
Query: 168 YQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMK 227
+ PD PM +E + A++ +N G Y G S + +M+
Sbjct: 155 VFANRPDPNTPM-----------------EETVRAMTHVINQGMAMYWGTSRWSSMEIME 197
Query: 228 FIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGILSGKYFS 287
VA + + P I + + + E H+ + + +SPLA GI+SGKY S
Sbjct: 198 AYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 257
>KVB2_HUMAN (Q13303) Voltage-gated potassium channel beta-2 subunit
(K(+) channel beta-2 subunit) (Kv-beta-2) (HKvbeta2)
Length = 367
Score = 94.7 bits (234), Expect = 3e-19
Identities = 76/240 (31%), Positives = 112/240 (46%), Gaps = 30/240 (12%)
Query: 49 LNVSRLCLGT-MTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
L VS L LGT +TFG Q T + QL+ AY GIN FD+AE+Y G +E
Sbjct: 47 LRVSCLGLGTWVTFGGQITDEMAEQLMTLAYDNGINLFDTAEVYAA-------GKAEVVL 99
Query: 108 GHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDL 167
G+ IK + R LVI TK+ G+ RG L +I + + SL R+QL+Y+D+
Sbjct: 100 GNIIKKKGWRRSSLVITTKIFW-GGKAETERG----LSRKHIIEGLKASLERLQLEYVDV 154
Query: 168 YQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMK 227
+ PD PM +E + A++ +N G Y G S + +M+
Sbjct: 155 VFANRPDPNTPM-----------------EETVRAMTHVINQGMAMYWGTSRWSSMEIME 197
Query: 228 FIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGILSGKYFS 287
VA + + P I + + + E H+ + + +SPLA GI+SGKY S
Sbjct: 198 AYSVARQFNLTPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 257
>KVB1_RAT (P63144) Voltage-gated potassium channel beta-1 subunit
(K(+) channel beta-1 subunit) (Kv-beta-1)
Length = 401
Score = 94.7 bits (234), Expect = 3e-19
Identities = 81/254 (31%), Positives = 122/254 (47%), Gaps = 36/254 (14%)
Query: 49 LNVSRLCLGT-MTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
L VS L LGT +TFG Q + + +L+ AY +G+N FD+AE+Y G +E
Sbjct: 81 LRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA-------GKAEVIL 133
Query: 108 GHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDL 167
G IK + R LVI TK+ G+ RG L +I + + SL R+QL+Y+D+
Sbjct: 134 GSIIKKKGWRRSSLVITTKLYW-GGKAETERG----LSRKHIIEGLKGSLQRLQLEYVDV 188
Query: 168 YQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMK 227
+ PD PM +E + A++ +N G Y G S + +M+
Sbjct: 189 VFANRPDSNTPM-----------------EEIVRAMTHVINQGMAMYWGTSRWSAMEIME 231
Query: 228 FIQVAEKSSSYPKIVSLQNSYSLLCRT-FDSAMAECCHQESISLLAYSPLAMGILSGKYF 286
VA + + P + Q Y L R + + E H+ + + +SPLA GI+SGKY
Sbjct: 232 AYSVARQFNMIPPVCE-QAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKY- 289
Query: 287 SHGNG-PADARLNL 299
GNG P +R +L
Sbjct: 290 --GNGVPESSRASL 301
>KVB1_MUSPU (Q28528) Voltage-gated potassium channel beta-1 subunit
(K(+) channel beta-1 subunit) (Kv-beta-1)
Length = 408
Score = 94.7 bits (234), Expect = 3e-19
Identities = 81/254 (31%), Positives = 122/254 (47%), Gaps = 36/254 (14%)
Query: 49 LNVSRLCLGT-MTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
L VS L LGT +TFG Q + + +L+ AY +G+N FD+AE+Y G +E
Sbjct: 88 LRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA-------GKAEVIL 140
Query: 108 GHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDL 167
G IK + R LVI TK+ G+ RG L +I + + SL R+QL+Y+D+
Sbjct: 141 GSIIKKKGWRRSSLVITTKLYW-GGKAETERG----LSRKHIIEGLKGSLQRLQLEYVDV 195
Query: 168 YQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMK 227
+ PD PM +E + A++ +N G Y G S + +M+
Sbjct: 196 VFANRPDSNTPM-----------------EEIVRAMTHVINQGMAMYWGTSRWSAMEIME 238
Query: 228 FIQVAEKSSSYPKIVSLQNSYSLLCRT-FDSAMAECCHQESISLLAYSPLAMGILSGKYF 286
VA + + P + Q Y L R + + E H+ + + +SPLA GI+SGKY
Sbjct: 239 AYSVARQFNMIPPVCE-QAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKY- 296
Query: 287 SHGNG-PADARLNL 299
GNG P +R +L
Sbjct: 297 --GNGVPESSRASL 308
>KVB1_MOUSE (P63143) Voltage-gated potassium channel beta-1 subunit
(K(+) channel beta-1 subunit) (Kv-beta-1)
Length = 401
Score = 94.7 bits (234), Expect = 3e-19
Identities = 81/254 (31%), Positives = 122/254 (47%), Gaps = 36/254 (14%)
Query: 49 LNVSRLCLGT-MTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
L VS L LGT +TFG Q + + +L+ AY +G+N FD+AE+Y G +E
Sbjct: 81 LRVSCLGLGTWVTFGGQISDEVAERLMTIAYESGVNLFDTAEVYAA-------GKAEVIL 133
Query: 108 GHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDL 167
G IK + R LVI TK+ G+ RG L +I + + SL R+QL+Y+D+
Sbjct: 134 GSIIKKKGWRRSSLVITTKLYW-GGKAETERG----LSRKHIIEGLKGSLQRLQLEYVDV 188
Query: 168 YQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMK 227
+ PD PM +E + A++ +N G Y G S + +M+
Sbjct: 189 VFANRPDSNTPM-----------------EEIVRAMTHVINQGMAMYWGTSRWSAMEIME 231
Query: 228 FIQVAEKSSSYPKIVSLQNSYSLLCRT-FDSAMAECCHQESISLLAYSPLAMGILSGKYF 286
VA + + P + Q Y L R + + E H+ + + +SPLA GI+SGKY
Sbjct: 232 AYSVARQFNMIPPVCE-QAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKY- 289
Query: 287 SHGNG-PADARLNL 299
GNG P +R +L
Sbjct: 290 --GNGVPESSRASL 301
>KVB1_CHICK (Q9PWR1) Voltage-gated potassium channel beta-1 subunit
(K(+) channel beta-1 subunit) (Kv-beta-1)
Length = 401
Score = 94.0 bits (232), Expect = 5e-19
Identities = 81/254 (31%), Positives = 122/254 (47%), Gaps = 36/254 (14%)
Query: 49 LNVSRLCLGT-MTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
L VS L LGT +TFG Q + + QL+ AY +G+N FD+AE+Y G +E
Sbjct: 81 LRVSCLGLGTWVTFGGQISDEVAEQLMTIAYESGVNLFDTAEVYAA-------GKAEVIL 133
Query: 108 GHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDL 167
G+ +K + R LVI TK+ G+ RG L +I + + SL R+QL+Y+D+
Sbjct: 134 GNILKKKGWRRSSLVITTKLYW-GGKAETERG----LSRKHIIEGLRASLQRLQLEYVDV 188
Query: 168 YQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMK 227
+ PD PM +E + A++ +N G Y G S + +M+
Sbjct: 189 VFANRPDNNTPM-----------------EEIVRAMTHVINQGMAMYWGTSRWSAMEIME 231
Query: 228 FIQVAEKSSSYPKIVSLQNSYSLLCRT-FDSAMAECCHQESISLLAYSPLAMGILSGKYF 286
VA + + P + Q Y L R + + E H+ + + +SPLA GI+SGKY
Sbjct: 232 AYSVARQFNLIPPVCE-QAEYHLFQREKVEVQLPELYHKIGVGAMTWSPLACGIISGKY- 289
Query: 287 SHGNG-PADARLNL 299
GNG P +R L
Sbjct: 290 --GNGVPESSRAAL 301
>KVB2_RAT (P62483) Voltage-gated potassium channel beta-2 subunit
(K(+) channel beta-2 subunit) (Kv-beta-2)
Length = 367
Score = 93.2 bits (230), Expect = 8e-19
Identities = 75/240 (31%), Positives = 111/240 (46%), Gaps = 30/240 (12%)
Query: 49 LNVSRLCLGT-MTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
L VS L LGT +TFG Q T + L+ AY GIN FD+AE+Y G +E
Sbjct: 47 LRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAA-------GKAEVVL 99
Query: 108 GHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDL 167
G+ IK + R LVI TK+ G+ RG L +I + + SL R+QL+Y+D+
Sbjct: 100 GNIIKKKGWRRSSLVITTKIFW-GGKAETERG----LSRKHIIEGLKASLERLQLEYVDV 154
Query: 168 YQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMK 227
+ PD PM +E + A++ +N G Y G S + +M+
Sbjct: 155 VFANRPDPNTPM-----------------EETVRAMTHVINQGMAMYWGTSRWSSMEIME 197
Query: 228 FIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGILSGKYFS 287
VA + + P I + + + E H+ + + +SPLA GI+SGKY S
Sbjct: 198 AYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 257
>KVB2_MOUSE (P62482) Voltage-gated potassium channel beta-2 subunit
(K(+) channel beta-2 subunit) (Kv-beta-2) (Neuroimmune
protein F5)
Length = 367
Score = 93.2 bits (230), Expect = 8e-19
Identities = 75/240 (31%), Positives = 111/240 (46%), Gaps = 30/240 (12%)
Query: 49 LNVSRLCLGT-MTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
L VS L LGT +TFG Q T + L+ AY GIN FD+AE+Y G +E
Sbjct: 47 LRVSCLGLGTWVTFGGQITDEMAEHLMTLAYDNGINLFDTAEVYAA-------GKAEVVL 99
Query: 108 GHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYIDL 167
G+ IK + R LVI TK+ G+ RG L +I + + SL R+QL+Y+D+
Sbjct: 100 GNIIKKKGWRRSSLVITTKIFW-GGKAETERG----LSRKHIIEGLKASLERLQLEYVDV 154
Query: 168 YQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGLMK 227
+ PD PM +E + A++ +N G Y G S + +M+
Sbjct: 155 VFANRPDPNTPM-----------------EETVRAMTHVINQGMAMYWGTSRWSSMEIME 197
Query: 228 FIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGILSGKYFS 287
VA + + P I + + + E H+ + + +SPLA GI+SGKY S
Sbjct: 198 AYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMTWSPLACGIVSGKYDS 257
>GS69_BACSU (P80874) General stress protein 69 (GSP69)
Length = 331
Score = 87.0 bits (214), Expect = 6e-17
Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 42/241 (17%)
Query: 49 LNVSRLCLGTMTFGEQ----NTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSE 104
+ SR+ LGT G S + + A GI D+A Y +G SE
Sbjct: 11 IEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYG-------FGQSE 63
Query: 105 EYFGHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGP-KSLDATNISQAIDNSLLRMQLD 163
E G IK RD++++ATK A + W + + I + ++NSL R+Q D
Sbjct: 64 EIVGKAIKEYG-KRDQVILATKTA-----LDWKNNQLFRHANRARIVEEVENSLKRLQTD 117
Query: 164 YIDLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPY 223
YIDLYQ+HWPD VP I+E + + + GKIR IG+SN +
Sbjct: 118 YIDLYQVHWPDPLVP-----------------IEETAEVMKELYDAGKIRAIGVSNFSIE 160
Query: 224 GLMKFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGILSG 283
+ F VA + ++Q Y+L R + ++ I+ L Y L G+L+G
Sbjct: 161 QMDTFRAVA-------PLHTIQPPYNLFEREMEESVLPYAKDNKITTLLYGSLCRGLLTG 213
Query: 284 K 284
K
Sbjct: 214 K 214
>YQKF_BACSU (P54569) Hypothetical oxidoreductase yqkF (EC 1.-.-.-)
Length = 306
Score = 86.7 bits (213), Expect = 8e-17
Identities = 70/239 (29%), Positives = 118/239 (49%), Gaps = 43/239 (17%)
Query: 48 NLNVSRLCLGTMTFGEQNTLSQSFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGMSEEYF 107
+L++S + LG M+ G + +++ +LDEA GIN+ D+A++Y G +EE
Sbjct: 10 DLDISEVGLGCMSLGTEK--NKALSILDEAIELGINYLDTADLYDR-------GRNEEIV 60
Query: 108 GHWIKHRNIPRDRLVIATKVAG--PSGQMTWIRGGPKSLDATNISQAIDNSLLRMQLDYI 165
G I++R R +++ATK G W K+ I +A+ SL R++ DYI
Sbjct: 61 GDAIQNR---RHDIILATKAGNRWDDGSEGWYWDPSKAY----IKEAVKKSLTRLKTDYI 113
Query: 166 DLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETPYGL 225
DLYQ+H G T D +IDE ++A +G IRY G+S+ P +
Sbjct: 114 DLYQLH---------GGTIED--------NIDETIEAFEELKQEGVIRYYGISSIRPNVI 156
Query: 226 MKFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGILSGK 284
++++ + IVS+ +SL R + + + IS++A P+A G+L+ K
Sbjct: 157 KEYVKKS-------NIVSIMMQFSLFDRRPEEWL-PLLEEHQISVVARGPVAKGLLTEK 207
>IOLS_BACSU (P46336) IolS protein (Vegetative protein 147) (VEG147)
Length = 310
Score = 85.9 bits (211), Expect = 1e-16
Identities = 69/243 (28%), Positives = 110/243 (44%), Gaps = 42/243 (17%)
Query: 48 NLNVSRLCLGTMTFGEQNTLSQ-----SFQLLDEAYHAGINFFDSAEMYPVPQRAQTWGM 102
+L V + LGT G N +L+ EA G+ D+A +Y + G
Sbjct: 10 DLQVFPIGLGTNAVGGHNLYPNLNEETGKELVREAIRNGVTMLDTAYIYGI-------GR 62
Query: 103 SEEYFGHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATNISQAIDNSLLRMQL 162
SEE G ++ N R+ +VIATK A ++ + +++D SL R+
Sbjct: 63 SEELIGEVLREFN--REDVVIATKAAHRKQGNDFVFDNSPDF----LKKSVDESLKRLNT 116
Query: 163 DYIDLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRAVNDGKIRYIGLSNETP 222
DYIDL+ IH+PD + P DE ++AL+ GKIR IG+SN +
Sbjct: 117 DYIDLFYIHFPDEHTPK-----------------DEAVNALNEMKKAGKIRSIGVSNFS- 158
Query: 223 YGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQESISLLAYSPLAMGILS 282
++ ++++ + LQ Y+LL R + + +IS + Y PL G+L+
Sbjct: 159 ------LEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIPYFPLVSGLLA 212
Query: 283 GKY 285
GKY
Sbjct: 213 GKY 215
>YCCK_BACSU (P46905) Hypothetical oxidoreductase yccK (EC 1.-.-.-)
Length = 310
Score = 85.1 bits (209), Expect = 2e-16
Identities = 75/259 (28%), Positives = 111/259 (41%), Gaps = 56/259 (21%)
Query: 29 KVELMMSGGGGVPVFNLAPNLNVSRLCLGTMTFGEQNTLSQSFQLLDEAYHAGINFFDSA 88
KV+ + G V NL PNLN L+ A G+NF D+A
Sbjct: 13 KVKRIGFGANAVGGHNLFPNLNDET----------------GKDLVRTALDGGVNFIDTA 56
Query: 89 EMYPVPQRAQTWGMSEEYFGHWIKHRNIPRDRLVIATKVAGPSGQMTWIRGGPKSLDATN 148
+Y + G SEE G ++ R + R+ L+IATK A G LD +
Sbjct: 57 FIYGL-------GRSEELIGEVVQERGV-RNELIIATKGAHKEVD------GSIELDNSR 102
Query: 149 --ISQAIDNSLLRMQLDYIDLYQIHWPDRYVPMFGETEYDPVQQYSSISIDEQLDALSRA 206
+ ++ SL R++ DYIDLY +H+PD P+ E L
Sbjct: 103 EFLRSEVEKSLKRLKTDYIDLYYVHFPDGKTPLA-----------------EVAGTLKEL 145
Query: 207 VNDGKIRYIGLSNETPYGLMKFIQVAEKSSSYPKIVSLQNSYSLLCRTFDSAMAECCHQE 266
++GKI+ IG SN L F + Y ++ Q YSL+ R + + C ++
Sbjct: 146 KDEGKIKAIGASNLDYQQLQDF-----NADGYLEV--FQAEYSLIQRDAEKELLPYCEKQ 198
Query: 267 SISLLAYSPLAMGILSGKY 285
IS + Y PLA G+L+GK+
Sbjct: 199 GISFIPYFPLASGLLTGKF 217
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.323 0.138 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,240,121
Number of Sequences: 164201
Number of extensions: 1602143
Number of successful extensions: 3689
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 95
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 3426
Number of HSP's gapped (non-prelim): 129
length of query: 337
length of database: 59,974,054
effective HSP length: 111
effective length of query: 226
effective length of database: 41,747,743
effective search space: 9434989918
effective search space used: 9434989918
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 66 (30.0 bits)
Medicago: description of AC141106.8