BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC140023.16 - phase: 0
(1060 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BA1B_MOUSE (Q9Z277) Bromodomain adjacent to zinc finger domain p... 38 0.16
OMPA_THEMA (Q01969) Outer membrane protein alpha precursor 37 0.28
SR40_YEAST (P32583) Suppressor protein SRP40 36 0.48
YQ38_CAEEL (Q09459) Hypothetical protein C09G5.8 in chromosome II 35 1.4
TALA_DICDI (P54633) Filopodin (Talin homolog) 35 1.4
YJH6_YEAST (P47035) Hypothetical 128.5 kDa protein in SCP160-SMC... 34 2.4
BA1B_HUMAN (Q9UIG0) Bromodomain adjacent to zinc finger domain p... 34 2.4
ALA1_CANAL (O13368) Agglutinin-like protein ALA1 precursor (Aggl... 34 2.4
YKK5_YEAST (P34250) Hypothetical 125.6 kDa protein in AAT1-GFA1 ... 33 3.1
Y413_RICPR (Q9ZDB9) Hypothetical protein RP413 33 3.1
RL29_SPICI (O31163) 50S ribosomal protein L29 33 3.1
MT8R_HUMAN (O43439) Protein CBFA2T2 (MTG8-like protein) (MTG8-re... 33 3.1
ETD1_SCHPO (Q9UTR4) Septation protein etd1 33 3.1
CAQ2_RABIT (P31235) Calsequestrin, cardiac muscle isoform precur... 33 3.1
CAQ1_CHICK (P19204) Calsequestrin, skeletal muscle isoform precu... 33 3.1
SPBP_RAT (P08723) Prostatic spermine-binding protein precursor (... 33 4.1
SMX6_SCHMA (Q26605) Homeobox protein SMOX-6 (Fragment) 33 4.1
IFH1_YEAST (P39520) IFH1 protein (RRP3 protein) 33 4.1
FX25_MOUSE (Q9D2Y6) F-box only protein 25 33 4.1
DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin... 33 4.1
>BA1B_MOUSE (Q9Z277) Bromodomain adjacent to zinc finger domain
protein 1B (Williams-Beuren syndrome chromosome region 9
protein homolog) (WBRS9)
Length = 1479
Score = 37.7 bits (86), Expect = 0.16
Identities = 59/285 (20%), Positives = 106/285 (36%), Gaps = 79/285 (27%)
Query: 562 LRRHNSRK-AKHNKLKVYTEIDESHAGEVWLLGLMDSEYSDLKIEEKLNALAALTGLLSS 620
L+ N +K A+ K K ++ + E +LG +D + +KIE+++ A ++S+
Sbjct: 785 LKEENDKKRAEKQKRKEMEARNKENGKEENVLGKVDRKKEIVKIEQQVEVEA--DDMISA 842
Query: 621 GSSIRMKDPVKVTADCSSSIQLRGSGAKIKRSVNPIEQMQCTKEVHMNSHACPVDSSLLV 680
S R+ + + A IQ R + +++R +E M H + +
Sbjct: 843 VKSRRL---LSMQAKRKREIQERETKVRLEREA---------EEERMRKHKAAAEKAF-- 888
Query: 681 SKFHIQEASLEKRKVSAYSHPIQSVFLGSDRRYNRYWLFLG--PCNIDDPG--------- 729
+ + K K+ PI G+DR +NRYWLF P + G
Sbjct: 889 ------QEGIAKAKLVLRRTPI-----GTDRNHNRYWLFSNEVPGLFIEKGWVHNSIDYR 937
Query: 730 ---HRRVYFESSEDGH-------------------------------------WEVIDTE 749
HR+ + +D + W + D++
Sbjct: 938 FKHHRKDHSNLPDDDYCPRRKKANLGKNASVNAHHGPALEAVETTVPKQGQNLWFLCDSQ 997
Query: 750 EALCALLSVLDDRGKREALLIESLERRQTSLCRSMSRIKVSNIGM 794
+ L LLS L +G RE+ E LE+R + + N+G+
Sbjct: 998 KELDELLSCLHPQGIRESQFKERLEKRYQEITHCNYMARKPNLGL 1042
>OMPA_THEMA (Q01969) Outer membrane protein alpha precursor
Length = 400
Score = 37.0 bits (84), Expect = 0.28
Identities = 42/204 (20%), Positives = 88/204 (42%), Gaps = 18/204 (8%)
Query: 436 DILVNYGLCPGTLKCELFKILSERGNNGCKVSELAKSMQIAELNLSSTTEELESLIYSTL 495
+++ N GL G L + + + N K+SE+ + + E +L + +LE ++
Sbjct: 156 EVVNNIGLKLGNLSRDYERY---KENVDAKISEVNEKLAALEKDLGNKIADLEGIVNLHE 212
Query: 496 SSDITLFEKISSSAYRLRMSTVAKDDDDSQSDTEDSGSVDDELNDSDTCSSGDDFGSGSI 555
I ++ KISS L A ++ S+ D E S V EL++ D ++
Sbjct: 213 KDIINIYNKISSVNEELNNKIAATEEKLSRKDEEISAMV--ELHEKDII---------NL 261
Query: 556 HSNIRKLRRHNSRKAKHNKLKVYTEID-ESHAGEVWLLGLMDSEYSDLKIEEKLNALAAL 614
++ + L ++K K ++ +I+ + + L+D+E K+ ++++AL
Sbjct: 262 YNKVAALNEDLNKKILDTKAELSAKIESQEKTLNMVYTKLLDTE---SKLNDEISALKEK 318
Query: 615 TGLLSSGSSIRMKDPVKVTADCSS 638
+ + +D V + SS
Sbjct: 319 DAEIQKTVDLHEQDIVNLYGKTSS 342
>SR40_YEAST (P32583) Suppressor protein SRP40
Length = 406
Score = 36.2 bits (82), Expect = 0.48
Identities = 48/191 (25%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
Query: 471 KSMQIAELNLSSTTEELESLIYSTLSSDITLFEKISSSAYRLRMSTVAKD-----DDDSQ 525
K +I E + SS++ S S+ SS + SSS+ S+ + D D +S
Sbjct: 17 KEKEIEEKSSSSSSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESS 76
Query: 526 SDTEDSGSVDDELNDSDTCSSGDDFGSGSIHSNI-----------------RKLRRHNSR 568
S + S S +DS++ S D SGS S+ ++ R ++
Sbjct: 77 SSSSSSSSSSSSSSDSESSSESDSSSSGSSSSSSSSSDESSSESESEDETKKRARESDNE 136
Query: 569 KAKHNKLKVYTEIDESHAGEVWLLGLMDSEYSDLKIEEKLNALAALTGLLSSGSSIRMKD 628
AK K K TE + S + E G S S+ E ++ ++ SS SS D
Sbjct: 137 DAKETK-KAKTEPESSSSSESSSSGSSSSSESESGSESDSDSSSS-----SSSSSDSESD 190
Query: 629 PVKVTADCSSS 639
+ SSS
Sbjct: 191 SESDSQSSSSS 201
Score = 33.9 bits (76), Expect = 2.4
Identities = 30/102 (29%), Positives = 42/102 (40%), Gaps = 5/102 (4%)
Query: 457 SERGNNGCKVSELAKSMQIAELNLSSTTEELESLIYSTLSSDITLFEKISSSAYRLRMST 516
S G++ SE + SS++ + ES S S + SSS S
Sbjct: 157 SSSGSSSSSESESGSESDSDSSSSSSSSSDSESDSESDSQSSSSSSSSDSSSD-----SD 211
Query: 517 VAKDDDDSQSDTEDSGSVDDELNDSDTCSSGDDFGSGSIHSN 558
+ D S SD+ S S +DSD+ SS D SGS S+
Sbjct: 212 SSSSDSSSDSDSSSSSSSSSSDSDSDSDSSSDSDSSGSSDSS 253
Score = 32.7 bits (73), Expect = 5.3
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 481 SSTTEELESLIYSTLSSDITLFEKISSSAYRLRMSTVAKDDDDSQSDTEDSGSVD----- 535
SS++ +S S SS + + SSS+ S+ + D DS SD++ SGS D
Sbjct: 198 SSSSSSSDSSSDSDSSSSDSSSDSDSSSSSS-SSSSDSDSDSDSSSDSDSSGSSDSSSSS 256
Query: 536 ----DELNDSDTCSSGDDFGSGS 554
DE SD+ S D SGS
Sbjct: 257 DSSSDESTSSDSSDSDSDSDSGS 279
>YQ38_CAEEL (Q09459) Hypothetical protein C09G5.8 in chromosome II
Length = 1531
Score = 34.7 bits (78), Expect = 1.4
Identities = 29/123 (23%), Positives = 56/123 (44%), Gaps = 6/123 (4%)
Query: 456 LSERGNNGCKVSELAKSMQIAELNLSST----TEELESLIYSTLSSDITLFEKISSSAYR 511
++ + ++G + +LA ++A + L+ T +E+ L Y T+ L ++ S+
Sbjct: 322 VARKKSDGGEKLQLATDEKLAIVRLNRTLKNKNDEITELKY-TIEKLRQLKSSVNQSSPP 380
Query: 512 LRMSTVAKDDDDSQSDTEDSGSVDDELNDSDTCSSGDDFGSGSIHSNIRKLRRHNSRKAK 571
R+ST + S ++ D D EL + S D+ G + +K R SRK+
Sbjct: 381 TRLSTSSSSKSSSSNNNNDGEGKDSELEEMSEMSD-DESGRSTPVIEEKKKPRRKSRKSS 439
Query: 572 HNK 574
H +
Sbjct: 440 HQE 442
>TALA_DICDI (P54633) Filopodin (Talin homolog)
Length = 2492
Score = 34.7 bits (78), Expect = 1.4
Identities = 23/89 (25%), Positives = 42/89 (46%), Gaps = 11/89 (12%)
Query: 455 ILSERGNNGCKVSELAKSMQIAELNLSSTT-----------EELESLIYSTLSSDITLFE 503
+++E N G + +L ++ IA N S T E S + + +SS + L++
Sbjct: 1709 LVTESKNVGDSILKLCQASLIASSNPSKETYQIIVNKCVDASEAMSKLVAQISSGVNLYK 1768
Query: 504 KISSSAYRLRMSTVAKDDDDSQSDTEDSG 532
++ S R+R S V D+ D+E+ G
Sbjct: 1769 ELDESLDRIRKSVVQTSAKDAPKDSENRG 1797
>YJH6_YEAST (P47035) Hypothetical 128.5 kDa protein in SCP160-SMC3
intergenic region
Length = 1189
Score = 33.9 bits (76), Expect = 2.4
Identities = 28/87 (32%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 479 NLSSTTEELESLIYSTLSSDITLF--------EKISSSAYRLRMSTVAKDDDDSQSDTE- 529
N SS +L + +LSS L EK S S + + + DD+S SD++
Sbjct: 1067 NPSSILHDLPRKVRPSLSSLSDLVSRGIPDVKEKTSKSNEKSQTKAPSSSDDESSSDSDS 1126
Query: 530 --DSGSVDDELNDSDTCSSGDDFGSGS 554
S SV D +DS + S DD G S
Sbjct: 1127 NSSSDSVSDSSSDSKSESDSDDSGDSS 1153
>BA1B_HUMAN (Q9UIG0) Bromodomain adjacent to zinc finger domain
protein 1B (Williams-Beuren syndrome chromosome region 9
protein) (WBRS9) (Williams syndrome transcription factor)
(hWALP2)
Length = 1483
Score = 33.9 bits (76), Expect = 2.4
Identities = 17/52 (32%), Positives = 30/52 (57%)
Query: 743 WEVIDTEEALCALLSVLDDRGKREALLIESLERRQTSLCRSMSRIKVSNIGM 794
W + D+++ L LL+ L +G RE+ L E LE+R + S+ + N+G+
Sbjct: 991 WFLCDSQKELDELLNCLHPQGIRESQLKERLEKRYQDIIHSIHLARKPNLGL 1042
>ALA1_CANAL (O13368) Agglutinin-like protein ALA1 precursor
(Agglutinin-like adhesin)
Length = 1419
Score = 33.9 bits (76), Expect = 2.4
Identities = 26/70 (37%), Positives = 35/70 (49%), Gaps = 9/70 (12%)
Query: 481 SSTTEELESLIYSTLSSDITLFEKISSSA----YRLRMSTVAKDDDDSQSDTEDSGSVDD 536
SS+ E+ S++ + SSDI L + SS+ STV+ D DS S E S
Sbjct: 674 SSSVEQSSSIVGLSSSSDIPLSSDMPSSSSTGLTSSESSTVSSYDSDSSSSIESS----- 728
Query: 537 ELNDSDTCSS 546
L+ SD CSS
Sbjct: 729 TLSSSDRCSS 738
>YKK5_YEAST (P34250) Hypothetical 125.6 kDa protein in AAT1-GFA1
intergenic region
Length = 1132
Score = 33.5 bits (75), Expect = 3.1
Identities = 13/30 (43%), Positives = 18/30 (59%)
Query: 520 DDDDSQSDTEDSGSVDDELNDSDTCSSGDD 549
DDDD +D +D DD++ND D + DD
Sbjct: 597 DDDDKDNDNDDDDDKDDDVNDDDKDENVDD 626
>Y413_RICPR (Q9ZDB9) Hypothetical protein RP413
Length = 219
Score = 33.5 bits (75), Expect = 3.1
Identities = 24/88 (27%), Positives = 37/88 (41%), Gaps = 6/88 (6%)
Query: 533 SVDDELNDSDTCSSGDDFGSGSIHSNIRKLRRHNSRKAKHNKLKVYTEIDESHAGEVWLL 592
++DD+ NDSD D G NI+K R K + + E + + + L
Sbjct: 65 NIDDDDNDSDANYDSDSLLIGEKIDNIKKNREMYINMIKRDIARQKAESNATQSNNDMTL 124
Query: 593 G------LMDSEYSDLKIEEKLNALAAL 614
D Y + KIEE+LN + A+
Sbjct: 125 SKANKKVRKDDSYKEKKIEEELNQIKAM 152
>RL29_SPICI (O31163) 50S ribosomal protein L29
Length = 339
Score = 33.5 bits (75), Expect = 3.1
Identities = 41/185 (22%), Positives = 72/185 (38%), Gaps = 26/185 (14%)
Query: 64 LNDAPTLGSEFDSLPSGPKNYNSACQQDQEPVKRRKASKSAIQSHPNCNMKAPVERHGMG 123
+NDA L E ++ S P + + + PV +K + A + P E+ G
Sbjct: 117 VNDAMDLTEE-QAVVSTPTGETNGLDEQKAPVAAKKPA--AAKDFPK-QKDVVEEKTATG 172
Query: 124 KGLATNPNCKMKAPVKRHGMGKGLATNPNCNMKAPVKRHGMGKGLAANPNSNMKAPVKRH 183
K A P+ K KAPV + + + T+ + +KA +K K AA ++ +
Sbjct: 173 KPAA--PSAK-KAPVAKKDVAQETKTDKDAALKALIKEKAAAKKPAAKSKTSTPS----- 224
Query: 184 GMGKGLMTIWRATNHDARDLPISFGSVDKDVHLTSNTKTPISVNRSQKAVTTNGESNQYA 243
GK +T+ T S D+ + T P+ +KA N + A
Sbjct: 225 --GKTTVTVKSVT------------SAKADIEVPKETSKPVPTKTVKKAAELNAKEKLVA 270
Query: 244 TQNQL 248
++ +
Sbjct: 271 IKSSV 275
>MT8R_HUMAN (O43439) Protein CBFA2T2 (MTG8-like protein)
(MTG8-related protein 1) (Myeloid translocation related
protein 1) (ETO homologous on chromosome 20) (p85)
Length = 604
Score = 33.5 bits (75), Expect = 3.1
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 4/55 (7%)
Query: 183 HGMGKGLMTIWRATNHDARDLPISFGSVDKDVHLTSNTKTPISVNRSQKAVTTNG 237
HG G+ L+ + R ++ + D + ++DK TS + TP SV A+ TNG
Sbjct: 553 HGQGRPLLPVGRGSSARSADCSVPSPALDKTSATTSRSSTPASVT----AIDTNG 603
>ETD1_SCHPO (Q9UTR4) Septation protein etd1
Length = 391
Score = 33.5 bits (75), Expect = 3.1
Identities = 56/230 (24%), Positives = 93/230 (40%), Gaps = 35/230 (15%)
Query: 419 FGSKQGAFQREGLGKELDILVNYGLCPGTLKCELFKILSERGNNGCKVSELAKSMQIAEL 478
F S + G+G EL + G ++ EL + + +++ELAK QI E
Sbjct: 147 FNSANKGSKASGVGAELPSV------NGFIEGELH---DDNETDSFRINELAK--QIQET 195
Query: 479 NLSSTTEELES---LIYSTLSS--------------DITLFEKISSSAYRLRMST---VA 518
+L +TT+E ES + + LS+ D T I++ + +R S+ +
Sbjct: 196 SLGATTQEDESSDGICWDELSTTSPESSKVSEPIIQDNTQTTHINNDSSDIRFSSRCDLF 255
Query: 519 KDDDDSQSDTEDSGSVDDELNDSDTCSSGDDFGSGS---IHSNIRKLRRHNSRKAKHNKL 575
DD DS + + + D L +T +S + R ++ K N
Sbjct: 256 ADDADSDWEQDFNVKFDSPLIIPETVNSAGHTVREQLFEVKEFTRSIKDLKDLYEKANSK 315
Query: 576 KVYTEIDESHAGEVWLLGLMD-SEYSDLKIEEKLNALAALTGLLSSGSSI 624
+Y + E +L L D + YSDLK E+ N L+ L SS+
Sbjct: 316 DIYDKDSEILGEAKAILRLADPANYSDLKDEDAQNILSKYKVKLEGDSSL 365
>CAQ2_RABIT (P31235) Calsequestrin, cardiac muscle isoform precursor
(Calsequestrin 2)
Length = 409
Score = 33.5 bits (75), Expect = 3.1
Identities = 22/68 (32%), Positives = 32/68 (46%), Gaps = 9/68 (13%)
Query: 473 MQIAELNLSSTTEELESLIYSTLSSDITLFEKISSSAYRLRMSTVAKDDDDSQSDTEDSG 532
M+I + + T EELE I LS I + + DDDD+ D +D+G
Sbjct: 344 MEIPDDDDLPTAEELEDWIEDVLSGKINTEDDDNEDE---------DDDDDNDDDDDDNG 394
Query: 533 SVDDELND 540
+ D+E ND
Sbjct: 395 NSDEEDND 402
>CAQ1_CHICK (P19204) Calsequestrin, skeletal muscle isoform
precursor (Calsequestrin 1) (Aspartactin)
(Laminin-binding protein)
Length = 406
Score = 33.5 bits (75), Expect = 3.1
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 15/77 (19%)
Query: 473 MQIAELNLSSTTEELESLIYSTLSSDITLFEKISSSAYRLRMSTVAKDDDDSQSDTEDSG 532
M+I + + T EELE I LS I +T DDDD D +D
Sbjct: 344 MEIRDDDDLPTAEELEDWIEDVLSGKI---------------NTEDDDDDDDDDDDDDDD 388
Query: 533 SVDDELNDSDTCSSGDD 549
DD+ +D D DD
Sbjct: 389 DDDDDDDDDDDDDDDDD 405
>SPBP_RAT (P08723) Prostatic spermine-binding protein precursor
(SBP)
Length = 279
Score = 33.1 bits (74), Expect = 4.1
Identities = 16/35 (45%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Query: 520 DDDDSQSDTEDS-GSVDDELNDSDTCSSGDDFGSG 553
DD+D ++D +D GS DD+ ND + DD GSG
Sbjct: 220 DDNDKENDKDDGEGSGDDDDNDDEDDDKDDDGGSG 254
>SMX6_SCHMA (Q26605) Homeobox protein SMOX-6 (Fragment)
Length = 204
Score = 33.1 bits (74), Expect = 4.1
Identities = 23/73 (31%), Positives = 36/73 (48%), Gaps = 4/73 (5%)
Query: 503 EKISSSAYRLRMSTVAKDDDDSQSDTEDS--GSVDDELNDSDTCSSGDDFGSGSIHSNIR 560
++I S + +++ DD+DS D +D+ DDEL D S D+ SIH N
Sbjct: 20 KEILSDSNSKDQKSLSDDDEDSDGDGDDNDDDEEDDELVKRD--ESEDNVLIESIHQNQN 77
Query: 561 KLRRHNSRKAKHN 573
L+ N +KH+
Sbjct: 78 NLKFENETLSKHS 90
>IFH1_YEAST (P39520) IFH1 protein (RRP3 protein)
Length = 1085
Score = 33.1 bits (74), Expect = 4.1
Identities = 22/70 (31%), Positives = 29/70 (41%)
Query: 519 KDDDDSQSDTEDSGSVDDELNDSDTCSSGDDFGSGSIHSNIRKLRRHNSRKAKHNKLKVY 578
+DDDD S T +DD DS D S I SN K S+ KH+ L+
Sbjct: 614 EDDDDDSSVTNVFIDIDDLDPDSFYFHYDSDGSSSLISSNSDKENSDGSKDCKHDLLETV 673
Query: 579 TEIDESHAGE 588
+D+ E
Sbjct: 674 VYVDDESTDE 683
>FX25_MOUSE (Q9D2Y6) F-box only protein 25
Length = 357
Score = 33.1 bits (74), Expect = 4.1
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 846 EEQLHKWIRVQEYDSWIWNSFYLDLNVVKYGRRSYLDSLARCRSCHDLYWRDERH 900
E+Q + + + E W Y L + Y D+L CR C L+W+D H
Sbjct: 278 EQQFCRHLILSEKGHIEWKLMYFTLQKYYPTKEQYGDTLHFCRHCSILFWKDSGH 332
>DSPP_MOUSE (P97399) Dentin sialophosphoprotein precursor (Dentin
matrix protein-3) (DMP-3) [Contains: Dentin
phosphoprotein (Dentin phosphophoryn) (DPP); Dentin
sialoprotein (DSP)]
Length = 934
Score = 33.1 bits (74), Expect = 4.1
Identities = 23/86 (26%), Positives = 39/86 (44%)
Query: 467 SELAKSMQIAELNLSSTTEELESLIYSTLSSDITLFEKISSSAYRLRMSTVAKDDDDSQS 526
S+ + S ++ + SS + + S S+ SSD + S S+ + + + S
Sbjct: 631 SDSSDSSDSSDSSSSSDSSDSSSCSDSSDSSDSSDSSDSSDSSDSSSSDSSSSSNSSDSS 690
Query: 527 DTEDSGSVDDELNDSDTCSSGDDFGS 552
D+ DS S D + SD+ S D GS
Sbjct: 691 DSSDSSSSSDSSDSSDSSDSSDSSGS 716
Score = 32.7 bits (73), Expect = 5.3
Identities = 27/97 (27%), Positives = 42/97 (42%), Gaps = 1/97 (1%)
Query: 457 SERGNNGCKVSELAKSMQIAELNLSSTTEELESLIYSTLSSDITLFEKISSSAYRLRMST 516
S +N S+ + S ++ + SS + + S+ SSD + SSS+ S+
Sbjct: 680 SSSSSNSSDSSDSSDSSSSSDSSDSSDSSDSSDSSGSSDSSDSSASSDSSSSSDSSDSSS 739
Query: 517 VAKDDDDSQS-DTEDSGSVDDELNDSDTCSSGDDFGS 552
+ D S S D+ DS D N SD+ S D S
Sbjct: 740 SSDSSDSSDSSDSSDSSESSDSSNSSDSSDSSDSSDS 776
Score = 32.0 bits (71), Expect = 9.0
Identities = 22/82 (26%), Positives = 34/82 (40%)
Query: 467 SELAKSMQIAELNLSSTTEELESLIYSTLSSDITLFEKISSSAYRLRMSTVAKDDDDSQS 526
S+ + S + N S +++ +S S S + SS + A D S S
Sbjct: 673 SDSSSSDSSSSSNSSDSSDSSDSSSSSDSSDSSDSSDSSDSSGSSDSSDSSASSDSSSSS 732
Query: 527 DTEDSGSVDDELNDSDTCSSGD 548
D+ DS S D + SD+ S D
Sbjct: 733 DSSDSSSSSDSSDSSDSSDSSD 754
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.316 0.132 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 125,009,106
Number of Sequences: 164201
Number of extensions: 5388325
Number of successful extensions: 16352
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 15893
Number of HSP's gapped (non-prelim): 255
length of query: 1060
length of database: 59,974,054
effective HSP length: 121
effective length of query: 939
effective length of database: 40,105,733
effective search space: 37659283287
effective search space used: 37659283287
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)
Medicago: description of AC140023.16