BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139709.6 + phase: 0
(138 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
RR11_PEA (P06587) Chloroplast 30S ribosomal protein S11 255 2e-68
RR11_LOTJA (Q9BBQ3) Chloroplast 30S ribosomal protein S11 248 3e-66
RR11_TOBAC (P06365) Chloroplast 30S ribosomal protein S11 243 7e-65
RR11_PHAAN (Q8MCA0) Chloroplast 30S ribosomal protein S11 243 7e-65
RR11_SPIOL (P06506) Chloroplast 30S ribosomal protein S11 239 1e-63
RR11_ARATH (P56802) Chloroplast 30S ribosomal protein S11 234 3e-62
RR11_OENHO (Q9MTJ2) Chloroplast 30S ribosomal protein S11 212 2e-55
RR11_EPIVI (P30059) Plastid 30S ribosomal protein S11 204 4e-53
RR11_PINTH (P41630) Chloroplast 30S ribosomal protein S11 198 3e-51
RR11_MARPO (P06364) Chloroplast 30S ribosomal protein S11 195 3e-50
RR11_ANTFO (P59381) Chloroplast 30S ribosomal protein S11 195 3e-50
RR11_MESVI (Q9MUU9) Chloroplast 30S ribosomal protein S11 191 3e-49
RR11_CHAGL (Q8M9V6) Chloroplast 30S ribosomal protein S11 187 8e-48
RR11_WHEAT (Q95H53) Chloroplast 30S ribosomal protein S11 183 8e-47
RR11_MAIZE (P09561) Chloroplast 30S ribosomal protein S11 181 3e-46
RR11_ORYSA (P12096) Chloroplast 30S ribosomal protein S11 181 5e-46
RR11_MARQU (Q9BBN1) Chloroplast 30S ribosomal protein S11 180 7e-46
RR11_PSINU (Q8WHZ0) Chloroplast 30S ribosomal protein S11 176 2e-44
RR11_SPIMX (O98461) Chloroplast 30S ribosomal protein S11 175 3e-44
RR11_NEPOL (Q9TL27) Chloroplast 30S ribosomal protein S11 167 6e-42
>RR11_PEA (P06587) Chloroplast 30S ribosomal protein S11
Length = 138
Score = 255 bits (652), Expect = 2e-68
Identities = 127/138 (92%), Positives = 132/138 (95%)
Query: 1 MAKSIPKIGSRKNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCG 60
MAKSIPKIGSRK GRIGSRKHPRKIPKGVIY+QASFNNTIVTVTDVRGRVISWSSAGSCG
Sbjct: 1 MAKSIPKIGSRKTGRIGSRKHPRKIPKGVIYIQASFNNTIVTVTDVRGRVISWSSAGSCG 60
Query: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIR 120
FKGTRRGTPFAAQTAA NAI+TVV+QGMQRA V IKGPGLGRDAALRAI RSGILL+ IR
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIQTVVEQGMQRAEVRIKGPGLGRDAALRAIYRSGILLKVIR 120
Query: 121 DVTPIPHNGCRAPKKRRV 138
DVTP+PHNGCRAPKKRRV
Sbjct: 121 DVTPLPHNGCRAPKKRRV 138
>RR11_LOTJA (Q9BBQ3) Chloroplast 30S ribosomal protein S11
Length = 138
Score = 248 bits (633), Expect = 3e-66
Identities = 123/138 (89%), Positives = 129/138 (93%)
Query: 1 MAKSIPKIGSRKNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCG 60
MAK IPKIGSRKN R GSRKH RKIPKG+I+VQASFNNTIVTVTDVRGRVISWSSAG+CG
Sbjct: 1 MAKPIPKIGSRKNARSGSRKHLRKIPKGIIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIR 120
FKGTRRGTPFAAQTAA NAIRTV DQGMQRA V+IKGPGLGRDAALRAI RSGILL FIR
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVADQGMQRAEVMIKGPGLGRDAALRAIRRSGILLNFIR 120
Query: 121 DVTPIPHNGCRAPKKRRV 138
DVTP+PHNGCR+PKKRRV
Sbjct: 121 DVTPMPHNGCRSPKKRRV 138
>RR11_TOBAC (P06365) Chloroplast 30S ribosomal protein S11
Length = 138
Score = 243 bits (621), Expect = 7e-65
Identities = 121/138 (87%), Positives = 130/138 (93%)
Query: 1 MAKSIPKIGSRKNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCG 60
MAK+IPKI SR+NGRIGSRK R+IPKGVI+VQASFNNTIVTVTDVRGRV+SWSSAG+ G
Sbjct: 1 MAKAIPKISSRRNGRIGSRKGARRIPKGVIHVQASFNNTIVTVTDVRGRVVSWSSAGTSG 60
Query: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIR 120
FKGTRRGTPFAAQTAAANAIRTVVDQGMQRA V+IKGPGLGRDAALRAI RSGILL F+R
Sbjct: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAEVMIKGPGLGRDAALRAIRRSGILLTFVR 120
Query: 121 DVTPIPHNGCRAPKKRRV 138
DVTP+PHNGCR PKKRRV
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>RR11_PHAAN (Q8MCA0) Chloroplast 30S ribosomal protein S11
Length = 138
Score = 243 bits (621), Expect = 7e-65
Identities = 120/138 (86%), Positives = 128/138 (91%)
Query: 1 MAKSIPKIGSRKNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCG 60
MAKSIPK GSRKN RIGSR RKIPKG+I+VQASFNNTIVT+TDVRGRVISWSSAG+CG
Sbjct: 1 MAKSIPKTGSRKNVRIGSRNQTRKIPKGIIHVQASFNNTIVTITDVRGRVISWSSAGTCG 60
Query: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIR 120
FKGTRRGTPFAAQTAA NAIRTV DQGMQRA ++IKGPGLGRDAALRAI RSGILL FIR
Sbjct: 61 FKGTRRGTPFAAQTAAGNAIRTVSDQGMQRAEIMIKGPGLGRDAALRAIRRSGILLNFIR 120
Query: 121 DVTPIPHNGCRAPKKRRV 138
DVTP+PHNGCR+PKKRRV
Sbjct: 121 DVTPMPHNGCRSPKKRRV 138
>RR11_SPIOL (P06506) Chloroplast 30S ribosomal protein S11
Length = 137
Score = 239 bits (611), Expect = 1e-63
Identities = 117/137 (85%), Positives = 128/137 (93%)
Query: 2 AKSIPKIGSRKNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCGF 61
AK IPKIGSR+NGRI SRK RKIPKGVI+VQASFNNTIVTVTDVRGRV+SW+SAG+CGF
Sbjct: 1 AKPIPKIGSRRNGRISSRKSARKIPKGVIHVQASFNNTIVTVTDVRGRVVSWASAGTCGF 60
Query: 62 KGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIRD 121
+GT+RGTPFAAQTAA NAIRTVV+QGMQRA V+IKGPGLGRDAALRAI RSGILL F+RD
Sbjct: 61 RGTKRGTPFAAQTAAGNAIRTVVEQGMQRAEVMIKGPGLGRDAALRAIRRSGILLSFVRD 120
Query: 122 VTPIPHNGCRAPKKRRV 138
VTP+PHNGCR PKKRRV
Sbjct: 121 VTPMPHNGCRPPKKRRV 137
>RR11_ARATH (P56802) Chloroplast 30S ribosomal protein S11
Length = 138
Score = 234 bits (598), Expect = 3e-62
Identities = 118/138 (85%), Positives = 126/138 (90%)
Query: 1 MAKSIPKIGSRKNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCG 60
MAK I +IGSRKN R GSRK+ R+IPKGVI+VQASFNNTIVTVTDVRGRVISWSSAG+CG
Sbjct: 1 MAKPILRIGSRKNTRSGSRKNVRRIPKGVIHVQASFNNTIVTVTDVRGRVISWSSAGTCG 60
Query: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIR 120
F+GTRRGTPFAAQTAA NAIR VVDQGMQRA V IKGPGLGRDAALRAI RSGILL F+R
Sbjct: 61 FRGTRRGTPFAAQTAAGNAIRAVVDQGMQRAEVRIKGPGLGRDAALRAIRRSGILLSFVR 120
Query: 121 DVTPIPHNGCRAPKKRRV 138
DVTP+PHNGCR PKKRRV
Sbjct: 121 DVTPMPHNGCRPPKKRRV 138
>RR11_OENHO (Q9MTJ2) Chloroplast 30S ribosomal protein S11
Length = 144
Score = 212 bits (540), Expect = 2e-55
Identities = 112/144 (77%), Positives = 119/144 (81%), Gaps = 6/144 (4%)
Query: 1 MAKSIPKIGSR------KNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWS 54
MAKSIP G R +N R SRK RKIPKGVI+VQASF+NTIVTVTDVRGRVISWS
Sbjct: 1 MAKSIPSAGLRLRLRLRRNARRRSRKSTRKIPKGVIHVQASFHNTIVTVTDVRGRVISWS 60
Query: 55 SAGSCGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGI 114
SAG+CGFK TR+GTPFAAQTAA +AIR VVDQGMQRA V IKGPGLGRDAALRAI RSGI
Sbjct: 61 SAGTCGFKSTRKGTPFAAQTAAGDAIRPVVDQGMQRAEVRIKGPGLGRDAALRAIRRSGI 120
Query: 115 LLRFIRDVTPIPHNGCRAPKKRRV 138
L IRDVTP+PHNGC PKKRRV
Sbjct: 121 RLSCIRDVTPLPHNGCMPPKKRRV 144
>RR11_EPIVI (P30059) Plastid 30S ribosomal protein S11
Length = 136
Score = 204 bits (520), Expect = 4e-53
Identities = 102/138 (73%), Positives = 116/138 (83%), Gaps = 2/138 (1%)
Query: 1 MAKSIPKIGSRKNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCG 60
MAK+IP GSR+N +GSRK +I KGVI+VQ SFNNTIV VTD++GRV+SWSSAG+CG
Sbjct: 1 MAKAIPITGSRRNVHVGSRKSSFRIQKGVIHVQTSFNNTIVAVTDIKGRVVSWSSAGTCG 60
Query: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIR 120
FKGTRRGT FAAQ AA NAIR V QGMQRA V+IKGPG+GRDA LRAI SG+LL F+R
Sbjct: 61 FKGTRRGTSFAAQIAATNAIRIV--QGMQRAEVMIKGPGIGRDAVLRAIRGSGVLLTFVR 118
Query: 121 DVTPIPHNGCRAPKKRRV 138
DVTP+PHNGCR PKKRRV
Sbjct: 119 DVTPMPHNGCRPPKKRRV 136
>RR11_PINTH (P41630) Chloroplast 30S ribosomal protein S11
Length = 130
Score = 198 bits (503), Expect = 3e-51
Identities = 94/124 (75%), Positives = 108/124 (86%)
Query: 15 RIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCGFKGTRRGTPFAAQT 74
RIGSR++ ++ KGVIYVQASFNNTIVT TDVRG+V+SWSSAG+CGFKGTRRGTPFAAQT
Sbjct: 7 RIGSRRNEHRVLKGVIYVQASFNNTIVTATDVRGQVLSWSSAGACGFKGTRRGTPFAAQT 66
Query: 75 AAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIRDVTPIPHNGCRAPK 134
AA N IR ++D+GM+R V+I GPG GRD ALR I RSGILL F+RDVTP+PHNGCR PK
Sbjct: 67 AAENVIRALMDRGMERVEVMISGPGRGRDTALRTIRRSGILLSFVRDVTPMPHNGCRPPK 126
Query: 135 KRRV 138
KRRV
Sbjct: 127 KRRV 130
>RR11_MARPO (P06364) Chloroplast 30S ribosomal protein S11
Length = 130
Score = 195 bits (495), Expect = 3e-50
Identities = 94/138 (68%), Positives = 114/138 (82%), Gaps = 8/138 (5%)
Query: 1 MAKSIPKIGSRKNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCG 60
M KS+ KI RK R++PKGVI++QASFNNTIVTVTD+RG+V+SWSSAG+CG
Sbjct: 1 MPKSVKKINLRKG--------KRRLPKGVIHIQASFNNTIVTVTDIRGQVVSWSSAGACG 52
Query: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIR 120
FKGT++ TPFAAQTAA NAIR ++DQGM++A V+I GPG GRD ALRAI RSGI+L F+R
Sbjct: 53 FKGTKKSTPFAAQTAAENAIRILIDQGMKQAEVMISGPGPGRDTALRAIRRSGIILSFVR 112
Query: 121 DVTPIPHNGCRAPKKRRV 138
DVTP+PHNGCR P+KRRV
Sbjct: 113 DVTPMPHNGCRPPRKRRV 130
>RR11_ANTFO (P59381) Chloroplast 30S ribosomal protein S11
Length = 130
Score = 195 bits (495), Expect = 3e-50
Identities = 95/138 (68%), Positives = 114/138 (81%), Gaps = 8/138 (5%)
Query: 1 MAKSIPKIGSRKNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCG 60
MAKSI KI RK R+IP+GV ++QASFNNTI+TVTDVRG+V+SWSSAG+CG
Sbjct: 1 MAKSIRKINLRKG--------KRRIPRGVTHIQASFNNTIITVTDVRGQVVSWSSAGACG 52
Query: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIR 120
FKGT++ TPFAAQTAA NAIR ++DQGM++A V+I GPG GRD ALRAI RSG++L ++R
Sbjct: 53 FKGTKKSTPFAAQTAAENAIRILIDQGMKQAEVMISGPGPGRDTALRAIRRSGVVLSYVR 112
Query: 121 DVTPIPHNGCRAPKKRRV 138
DVTPIPHNGCR PKKRRV
Sbjct: 113 DVTPIPHNGCRPPKKRRV 130
>RR11_MESVI (Q9MUU9) Chloroplast 30S ribosomal protein S11
Length = 130
Score = 191 bits (486), Expect = 3e-49
Identities = 93/138 (67%), Positives = 112/138 (80%), Gaps = 8/138 (5%)
Query: 1 MAKSIPKIGSRKNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCG 60
MAK I KIG RK RKIPKGV++VQA+FNNTIVT+TDVRG V+SWSSAG+CG
Sbjct: 1 MAKQIRKIGVRKT--------KRKIPKGVVHVQATFNNTIVTITDVRGEVLSWSSAGACG 52
Query: 61 FKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIR 120
FKGT++GTPFAAQTAA NA+R V+DQGM++A ++I GPG GR+ A+RAI +G+ + IR
Sbjct: 53 FKGTKKGTPFAAQTAAENAVRQVIDQGMKQAEIMISGPGSGRETAIRAIQAAGLGITLIR 112
Query: 121 DVTPIPHNGCRAPKKRRV 138
DVTPIPHNGCR PKKRRV
Sbjct: 113 DVTPIPHNGCRPPKKRRV 130
>RR11_CHAGL (Q8M9V6) Chloroplast 30S ribosomal protein S11
Length = 130
Score = 187 bits (474), Expect = 8e-48
Identities = 87/124 (70%), Positives = 105/124 (84%)
Query: 15 RIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCGFKGTRRGTPFAAQT 74
+I RK +K+PKGVI++QASFNNTIVT+TDVRG+VISWSSAG+CGFKG ++ TPFAAQT
Sbjct: 7 KINLRKIKKKVPKGVIHIQASFNNTIVTITDVRGQVISWSSAGACGFKGAKKSTPFAAQT 66
Query: 75 AAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIRDVTPIPHNGCRAPK 134
AA A+R ++DQGM++A V+I GPG GRD ALR I +SGI L F+RDVTPIPHNGCR P
Sbjct: 67 AAEKALRPLIDQGMRQAEVMISGPGRGRDTALRIIRKSGITLNFVRDVTPIPHNGCRPPS 126
Query: 135 KRRV 138
KRRV
Sbjct: 127 KRRV 130
>RR11_WHEAT (Q95H53) Chloroplast 30S ribosomal protein S11
Length = 143
Score = 183 bits (465), Expect = 8e-47
Identities = 95/146 (65%), Positives = 114/146 (78%), Gaps = 11/146 (7%)
Query: 1 MAKSIPKIGSRKNGRIGSR--------KHPRKIPKGVIYVQASFNNTIVTVTDVRGRVIS 52
MAK+IPKIGSRK RIG R K R+I KGVI+VQASFNNTI+TVTD +GRV+
Sbjct: 1 MAKAIPKIGSRKKVRIGLRRNARFSLRKSARRITKGVIHVQASFNNTIITVTDPQGRVVF 60
Query: 53 WSSAGSCGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARS 112
WSSAG+CGFK +R+ +P+A Q A +AIRTV G+QRA V++KG G GRDAALRAIA+S
Sbjct: 61 WSSAGTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDAALRAIAKS 117
Query: 113 GILLRFIRDVTPIPHNGCRAPKKRRV 138
G+ L IRDVTP+PHNGCR PKKRR+
Sbjct: 118 GVRLSCIRDVTPMPHNGCRPPKKRRL 143
>RR11_MAIZE (P09561) Chloroplast 30S ribosomal protein S11
Length = 143
Score = 181 bits (460), Expect = 3e-46
Identities = 93/146 (63%), Positives = 113/146 (76%), Gaps = 11/146 (7%)
Query: 1 MAKSIPKIGSRKNGRIGSR--------KHPRKIPKGVIYVQASFNNTIVTVTDVRGRVIS 52
M K+IPKIGSRK RIG R K R+I KG+I+VQASFNNTI+TVTD +GRV+
Sbjct: 1 MTKAIPKIGSRKKVRIGLRRNARFSLRKSARRITKGIIHVQASFNNTIITVTDPQGRVVF 60
Query: 53 WSSAGSCGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARS 112
WSSAG+CGFK +R+ +P+A Q A +AIRTV G+QRA V++KG G GRDAALRAIA+S
Sbjct: 61 WSSAGTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDAALRAIAKS 117
Query: 113 GILLRFIRDVTPIPHNGCRAPKKRRV 138
G+ L IRDVTP+PHNGCR PKKRR+
Sbjct: 118 GVRLSCIRDVTPMPHNGCRPPKKRRL 143
>RR11_ORYSA (P12096) Chloroplast 30S ribosomal protein S11
Length = 143
Score = 181 bits (458), Expect = 5e-46
Identities = 93/146 (63%), Positives = 113/146 (76%), Gaps = 11/146 (7%)
Query: 1 MAKSIPKIGSRKNGRIGSR--------KHPRKIPKGVIYVQASFNNTIVTVTDVRGRVIS 52
M K+IPKIGSR+ RIG R K R+I KGVI+VQASFNNTI+TVTD +GRV+
Sbjct: 1 MTKAIPKIGSRRKVRIGLRRNARFSLRKSARRITKGVIHVQASFNNTIITVTDPQGRVVF 60
Query: 53 WSSAGSCGFKGTRRGTPFAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARS 112
WSSAG+CGFK +R+ +P+A Q A +AIRTV G+QRA V++KG G GRDAALRAIA+S
Sbjct: 61 WSSAGTCGFKSSRKASPYAGQRTAVDAIRTV---GLQRAEVMVKGAGSGRDAALRAIAKS 117
Query: 113 GILLRFIRDVTPIPHNGCRAPKKRRV 138
G+ L IRDVTP+PHNGCR PKKRR+
Sbjct: 118 GVRLSCIRDVTPMPHNGCRPPKKRRL 143
>RR11_MARQU (Q9BBN1) Chloroplast 30S ribosomal protein S11
Length = 130
Score = 180 bits (457), Expect = 7e-46
Identities = 84/120 (70%), Positives = 101/120 (84%)
Query: 19 RKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCGFKGTRRGTPFAAQTAAAN 78
RK R + KG+I++QA FNNTI+TVTDVRG+VI WSSAG+CGFKGTRR TPFAAQ AA N
Sbjct: 11 RKGKRGVQKGIIHIQAGFNNTIITVTDVRGQVILWSSAGACGFKGTRRSTPFAAQAAAEN 70
Query: 79 AIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIRDVTPIPHNGCRAPKKRRV 138
A+R +D+G+++A V+I GPG GRD ALRAI RSG+ L F+RDVTP+PHNGCR PKKRRV
Sbjct: 71 AVRASMDRGLKQAEVMISGPGPGRDTALRAIRRSGVTLSFVRDVTPMPHNGCRPPKKRRV 130
>RR11_PSINU (Q8WHZ0) Chloroplast 30S ribosomal protein S11
Length = 130
Score = 176 bits (445), Expect = 2e-44
Identities = 82/124 (66%), Positives = 103/124 (82%)
Query: 15 RIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCGFKGTRRGTPFAAQT 74
R+ S K R I KG+I ++ASFNNTIVTVT+ +G+VI+WSSAG+CGFKGT+R TPFAAQ
Sbjct: 7 RLSSHKKKRVIFKGIIQIKASFNNTIVTVTNSQGQVITWSSAGACGFKGTKRSTPFAAQI 66
Query: 75 AAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIRDVTPIPHNGCRAPK 134
A NAIRT++ QGM++A V+I GPG GRD ALR I +SG++L F+RDVTP+PHNGCR PK
Sbjct: 67 ATENAIRTLISQGMKQAEVMISGPGPGRDTALRTIRKSGLVLHFVRDVTPLPHNGCRPPK 126
Query: 135 KRRV 138
+RRV
Sbjct: 127 RRRV 130
>RR11_SPIMX (O98461) Chloroplast 30S ribosomal protein S11
Length = 130
Score = 175 bits (443), Expect = 3e-44
Identities = 85/124 (68%), Positives = 101/124 (80%)
Query: 15 RIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCGFKGTRRGTPFAAQT 74
+I RK RK PK +I+VQASFNNTIVTVTDV+G+VIS SAG+CGFKG ++ TPFAAQT
Sbjct: 7 KINIRKVKRKTPKAIIHVQASFNNTIVTVTDVQGQVISSCSAGACGFKGAKKNTPFAAQT 66
Query: 75 AAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIRDVTPIPHNGCRAPK 134
AA NAIR ++DQG+++A V+I GPG GRD ALRAI SGI L +RDVTP+PHNGCR PK
Sbjct: 67 AAENAIRLLIDQGLKQAEVMISGPGRGRDTALRAIRNSGITLSLVRDVTPLPHNGCRRPK 126
Query: 135 KRRV 138
RRV
Sbjct: 127 TRRV 130
>RR11_NEPOL (Q9TL27) Chloroplast 30S ribosomal protein S11
Length = 130
Score = 167 bits (423), Expect = 6e-42
Identities = 73/129 (56%), Positives = 105/129 (80%)
Query: 10 SRKNGRIGSRKHPRKIPKGVIYVQASFNNTIVTVTDVRGRVISWSSAGSCGFKGTRRGTP 69
+R++ R+ R+ RK+ KGV+++QASFNNTIVT+TD G V++WSSAG+CGF+G ++GTP
Sbjct: 2 ARQSKRLAPRRLKRKVSKGVVHIQASFNNTIVTITDSSGGVLAWSSAGACGFRGAKKGTP 61
Query: 70 FAAQTAAANAIRTVVDQGMQRAVVIIKGPGLGRDAALRAIARSGILLRFIRDVTPIPHNG 129
FAAQTAA AIR +DQGM++A +I++GPG GR+ A+RA+ +G+ + IRD+T +PHNG
Sbjct: 62 FAAQTAAETAIRQCIDQGMRQADIIVQGPGNGRETAIRALQLAGVGVSLIRDITSVPHNG 121
Query: 130 CRAPKKRRV 138
CR PK+RR+
Sbjct: 122 CRPPKQRRI 130
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.323 0.138 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,378,921
Number of Sequences: 164201
Number of extensions: 556986
Number of successful extensions: 1486
Number of sequences better than 10.0: 187
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1228
Number of HSP's gapped (non-prelim): 188
length of query: 138
length of database: 59,974,054
effective HSP length: 99
effective length of query: 39
effective length of database: 43,718,155
effective search space: 1705008045
effective search space used: 1705008045
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)
Medicago: description of AC139709.6