BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139344.5 + phase: 0
(250 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7 pre... 105 8e-23
FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1 pre... 95 2e-19
FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8 pre... 81 2e-15
FA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10 pr... 78 2e-14
YE83_SYNY3 (P74615) Hypothetical protein sll1483 precursor 42 0.002
BGH3_RABIT (Q95215) Transforming growth factor-beta induced prot... 41 0.003
YH35_SYNP2 (O33752) Hypothetical protein sll1735 homolog 40 0.005
MP70_MYCTU (Q50769) Immunogenic protein MPT70 precursor 40 0.005
POSN_MOUSE (Q62009) Periostin precursor (PN) (Osteoblast specifi... 40 0.007
YH35_SYNY3 (P73392) Hypothetical protein sll1735 35 0.17
N188_YEAST (P52593) Nucleoporin NUP188 (Nuclear pore protein NUP... 34 0.29
AR3A_HUMAN (Q99856) AT-rich interactive domain-containing protei... 34 0.29
KBF1_DROME (Q94527) Nuclear factor NF-kappa-B p110 subunit (Reli... 34 0.38
MP83_MYCTU (Q10790) Cell surface lipoprotein MPT83 precursor (Li... 33 0.49
SAN1_YEAST (P22470) SAN1 protein 33 0.84
SBN2_HUMAN (Q8WWQ8) Stabilin 2 precursor (FEEL-2 protein) (Fasci... 32 1.1
SBN1_MOUSE (Q8R4Y4) Stabilin 1 precursor (FEEL-1 protein) 32 1.1
BGH3_PIG (O11780) Transforming growth factor-beta induced protei... 32 1.4
BGH3_HUMAN (Q15582) Transforming growth factor-beta induced prot... 32 1.9
SCD1_SCHPO (P40995) Protein scd1 31 2.5
>FLA7_ARATH (Q9SJ81) Fasciclin-like arabinogalactan protein 7
precursor
Length = 254
Score = 105 bits (263), Expect = 8e-23
Identities = 83/259 (32%), Positives = 129/259 (49%), Gaps = 17/259 (6%)
Query: 1 MVMMKHPFLSFTLLLIVFFSSTTTLAQKSPA----PAPSTDTAPTDIIRILKKAGGFTTL 56
M M+ + LIV +S T + +P PAP+ ++ +L AG F T
Sbjct: 1 MAKMQLSIFIAVVALIVCSASAKTASPPAPVLPPTPAPAPAPENVNLTELLSVAGPFHTF 60
Query: 57 IRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLP 116
+ L +T V +Q N+ G+T+F P D++F + K L++L+ +Q +L+ FH LP
Sbjct: 61 LDYLLSTGVIETFQNQANNTEEGITIFVPKDDAFKAQKNPPLSNLTKDQLKQLVLFHALP 120
Query: 117 TFVSMSNFDTL--SNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQL 174
+ S+S F L S PV T AG + L T V + + V +V++ +
Sbjct: 121 HYYSLSEFKNLSQSGPVSTFAGG---QYSLKFTDVSGTVRIDSLWTRTKVSSSVFSTDPV 177
Query: 175 AVYQVDKVLLPRDFF-VAKPPAPAPAPEKTKSSKKKS---SDSDGGVAGDDDSGAVNVKQ 230
AVYQV++VLLP F PP PAPAP S+ S +DS+G A S N Q
Sbjct: 178 AVYQVNRVLLPEAIFGTDVPPMPAPAPAPIVSAPSDSPSVADSEG--ASSPKSSHKNSGQ 235
Query: 231 RRLMLVPVA-VATIIVAIY 248
+L+L P++ V + +VA++
Sbjct: 236 -KLLLAPISMVISGLVALF 253
>FLA1_ARATH (Q9FM65) Fasciclin-like arabinogalactan protein 1
precursor
Length = 424
Score = 94.7 bits (234), Expect = 2e-19
Identities = 70/219 (31%), Positives = 103/219 (46%), Gaps = 27/219 (12%)
Query: 24 TLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLF 83
T A +PAPA T + A G L T +++ + L GG+T+F
Sbjct: 174 TAAAPTPAPAEMNLTG-------IMSAHGCKVFAETLLTNPGASKTYQESLE--GGMTVF 224
Query: 84 APNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLG 143
P D++ P + N L+ +K + F +PT+ SM+ + + P+ T A D +
Sbjct: 225 CPGDDAMKGFLPKYKN-LTAPKKEAFLDFLAVPTYYSMAMLKSNNGPMNTLATDGANKFE 283
Query: 144 LNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVA---KPPAPAPAP 200
L V + G +V + T I V + T+ + LA+Y DKVLLP++ F A + PAPAPAP
Sbjct: 284 LTVQNDGEKVTLKTRINTVKIVDTLIDEQPLAIYATDKVLLPKELFKASAVEAPAPAPAP 343
Query: 201 E-------------KTKSSKKKSSDS-DGGVAGDDDSGA 225
E K K KKK++ S D GD DS A
Sbjct: 344 EDGDVADSPKAAKGKAKGKKKKAAPSPDNDPFGDSDSPA 382
>FLA8_ARATH (O22126) Fasciclin-like arabinogalactan protein 8
precursor (AtAGP8)
Length = 420
Score = 81.3 bits (199), Expect = 2e-15
Identities = 57/189 (30%), Positives = 94/189 (49%), Gaps = 7/189 (3%)
Query: 31 APAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSF 90
APAPS + +I +L+KAG T LL ++ V S + GLT+FAP+D +F
Sbjct: 180 APAPSASLS--NITGLLEKAG-CKTFANLLVSSGVLKTYESAV---EKGLTVFAPSDEAF 233
Query: 91 SSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSG 150
+ L L+ + L+++H L + + T N + T A + + L ++SG
Sbjct: 234 KAEGVPDLTKLTQAEVVSLLEYHALAEYKPKGSLKTNKNNISTLATNGAGKFDLTTSTSG 293
Query: 151 NQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFF-VAKPPAPAPAPEKTKSSKKK 209
++V + TG+ + TV + ++ VD VLLP + F +K P+PAPAPE +
Sbjct: 294 DEVILHTGVAPSRLADTVLDATPVVIFTVDNVLLPAELFGKSKSPSPAPAPEPVTAPTPS 353
Query: 210 SSDSDGGVA 218
+D+ A
Sbjct: 354 PADAPSPTA 362
>FA10_ARATH (Q9LZX4) Fasciclin-like arabinogalactan protein 10
precursor
Length = 422
Score = 77.8 bits (190), Expect = 2e-14
Identities = 56/195 (28%), Positives = 96/195 (48%), Gaps = 6/195 (3%)
Query: 31 APAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSF 90
APAPS+ ++I +L+KAG T LL ++ V S + GLT+FAP+D +F
Sbjct: 180 APAPSS-AGVSNITGLLEKAG-CKTFANLLVSSGVIKTFESTV---EKGLTVFAPSDEAF 234
Query: 91 SSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSG 150
+ L +L+ + L+++H L + + T + + T A + + L ++SG
Sbjct: 235 KARGVPDLTNLTQAEVVSLLEYHALAEYKPKGSLKTNKDAISTLATNGAGKYDLTTSTSG 294
Query: 151 NQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKTKSSKKKS 210
++V + TG+ + TV + + ++ VD VLLP + F K +PAPAPE +
Sbjct: 295 DEVILHTGVGPSRLADTVVDETPVVIFTVDNVLLPAELF-GKSSSPAPAPEPVSAPTPTP 353
Query: 211 SDSDGGVAGDDDSGA 225
+ S V + A
Sbjct: 354 AKSPSPVEAPSPTAA 368
>YE83_SYNY3 (P74615) Hypothetical protein sll1483 precursor
Length = 180
Score = 41.6 bits (96), Expect = 0.002
Identities = 42/173 (24%), Positives = 84/173 (48%), Gaps = 21/173 (12%)
Query: 17 VFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNS 76
V + T + + +TD+A T I++ A G T L+ + + + + L++
Sbjct: 23 VAMAEMETTEKSAVVSQAATDSAMT----IVEVAAGNETFSTLVAAVKAADLVEA--LSA 76
Query: 77 NGGLTLFAPNDNSFSSLKPGFLNS-LSDEQKNKLIQ---FHLLPTFVSMSNFDTLSNPVR 132
G T+FAP +++F++L G + S L E K+KL++ +H++P ++ + S V
Sbjct: 77 EGPFTVFAPTNDAFAALPAGTVESLLLPENKDKLVKILTYHVVPGKITAAQVQ--SGEVA 134
Query: 133 TQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLP 185
+ AG+ L V +VN T +++ V + ++ +D+V+LP
Sbjct: 135 SLAGE---ALTFKVKDGKVKVNKAT-VISADVDAS-----NGVIHVIDQVILP 178
>BGH3_RABIT (Q95215) Transforming growth factor-beta induced protein
IG-H3 precursor (Beta IG-H3) (Kerato-epithelin)
(RGD-containing collagen associated protein) (RGD-CAP)
Length = 683
Score = 40.8 bits (94), Expect = 0.003
Identities = 30/115 (26%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 43 IIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLS 102
++ +LK F+ L+ +Q +++ + LN G T+FAP + +F +L PG LN L
Sbjct: 505 VMDVLKGDNRFSMLVAAIQFRRLT-----ETLNREGAYTVFAPTNEAFQALPPGELNKLL 559
Query: 103 DEQKN--KLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVNM 155
K ++++H+ + TL +++ GD L V+S N V++
Sbjct: 560 GNAKELADILKYHVGEEILVSGGIGTLVR-LKSLQGDK-----LEVSSKNNAVSV 608
>YH35_SYNP2 (O33752) Hypothetical protein sll1735 homolog
Length = 133
Score = 40.0 bits (92), Expect = 0.005
Identities = 30/128 (23%), Positives = 58/128 (44%), Gaps = 14/128 (10%)
Query: 43 IIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSL- 101
I+ I GF+TL+ +Q + + L G T+FAPND++F+ L PG + +L
Sbjct: 4 IVDIAVNNEGFSTLVAAVQAAGLV-----ETLAGEGDFTVFAPNDDAFAKLPPGTIQTLV 58
Query: 102 -SDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQA------GDDPYRLGLNVTSSGNQVN 154
+ Q +++ +H+ ++ + L + G+D + + N T +
Sbjct: 59 QNPPQLARILTYHVAAGRLTKDDLIKLGEVTSIEGSPIPINGEDDFEV-KNATVLAADIE 117
Query: 155 MTTGIVNV 162
GI++V
Sbjct: 118 ADNGIIHV 125
>MP70_MYCTU (Q50769) Immunogenic protein MPT70 precursor
Length = 193
Score = 40.0 bits (92), Expect = 0.005
Identities = 35/162 (21%), Positives = 64/162 (38%), Gaps = 14/162 (8%)
Query: 26 AQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAP 85
A +P S D + + T + + Q++ Q+N ++G T+FAP
Sbjct: 42 AAANPTGPASVQGMSQDPVAVAASNNPELTTLTAALSGQLNPQVNLVDTLNSGQYTVFAP 101
Query: 86 NDNSFSSLKPGFLNSLSDEQK--NKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLG 143
+ +FS L ++ L ++ +H++ S +N G G
Sbjct: 102 TNAAFSKLPASTIDELKTNSSLLTSILTYHVVAGQTSPANV----------VGTRQTLQG 151
Query: 144 LNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLP 185
+VT +G ++ G +V GG + VY +D VL+P
Sbjct: 152 ASVTVTGQGNSLKVGNADVVCGGV--STANATVYMIDSVLMP 191
>POSN_MOUSE (Q62009) Periostin precursor (PN) (Osteoblast specific
factor 2) (OSF-2)
Length = 838
Score = 39.7 bits (91), Expect = 0.007
Identities = 35/144 (24%), Positives = 61/144 (42%), Gaps = 17/144 (11%)
Query: 47 LKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQK 106
L++ F+ + LL+ + LL G TLFAP +++F + L ++
Sbjct: 505 LRQDKRFSIFLSLLEAADLK-----DLLTQPGDWTLFAPTNDAFKGMTSEERELLIGDKN 559
Query: 107 --NKLIQFHLLPTFVSMSNFDT-LSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVT 163
+I +HL P F+ ++N ++T G Y G+N T N++ + T
Sbjct: 560 ALQNIILYHLTPGVYIGKGFEPGVTNILKTTQGSKIYLKGVNETLLVNELKSKESDIMTT 619
Query: 164 VGGTVYTDHQLAVYQVDKVLLPRD 187
G ++ VDK+L P D
Sbjct: 620 NG---------VIHVVDKLLYPAD 634
Score = 31.6 bits (70), Expect = 1.9
Identities = 35/123 (28%), Positives = 54/123 (43%), Gaps = 16/123 (13%)
Query: 69 INSQLLNS---NGGLTLFAPNDNSFSSLKPGFLNSLSDEQ--KNKLIQFHLLPTFVSMSN 123
I S LL S +G TLFAP + +F L G L + ++ L+++H+L T + S
Sbjct: 257 ITSDLLESLGRDGHFTLFAPTNEAFEKLPRGVLERIMGDKVASEALMKYHILNT-LQCSE 315
Query: 124 FDTLSNPVRTQAGDDPYRLGLNVTS-SGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKV 182
T T G + +G S S N + M VT G ++ +D+V
Sbjct: 316 AITGGAVFETMEG-NTIEIGCEGDSISINGIKMVNKKDIVTKNGVIHL--------IDEV 366
Query: 183 LLP 185
L+P
Sbjct: 367 LIP 369
>YH35_SYNY3 (P73392) Hypothetical protein sll1735
Length = 133
Score = 35.0 bits (79), Expect = 0.17
Identities = 22/76 (28%), Positives = 39/76 (50%), Gaps = 7/76 (9%)
Query: 42 DIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSL 101
+I+ I F+TL+ T V+ +L S G T+FAP D +F+ L PG + +L
Sbjct: 3 NIVEIAVSDERFSTLV-----TAVTAANLVDVLQSPGPFTVFAPTDTAFAKLPPGTITTL 57
Query: 102 SDE--QKNKLIQFHLL 115
Q +++ +H++
Sbjct: 58 VQNIPQLARILTYHVV 73
>N188_YEAST (P52593) Nucleoporin NUP188 (Nuclear pore protein
NUP188)
Length = 1655
Score = 34.3 bits (77), Expect = 0.29
Identities = 35/126 (27%), Positives = 53/126 (41%), Gaps = 6/126 (4%)
Query: 16 IVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLN 75
++ SS L Q P S D AP + IL TT I ++ + S+++N
Sbjct: 793 LIISSSANKLLQLFLTPMDSIDLAPNTLTNILISPLNTTTKIL---GDKILGNLYSKVMN 849
Query: 76 SNGGL-TLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFV--SMSNFDTLSNPVR 132
++ L TL S LKP L L +KL+ + LP++V + + LS V
Sbjct: 850 NSFKLCTLLIAIRGSNRDLKPSNLEKLLFINSSKLVDVYTLPSYVHFKVQIIELLSYLVE 909
Query: 133 TQAGDD 138
DD
Sbjct: 910 APWNDD 915
>AR3A_HUMAN (Q99856) AT-rich interactive domain-containing protein
3A (ARID domain-containing protein 3A) (B-cell regulator
of IgH transcription) (Bright) (E2F binding protein 1)
Length = 593
Score = 34.3 bits (77), Expect = 0.29
Identities = 31/122 (25%), Positives = 56/122 (45%), Gaps = 22/122 (18%)
Query: 101 LSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIV 160
++DEQ+ +L+Q L F++M+ +S + +QA + +N+T + +++ +
Sbjct: 466 VADEQQ-RLMQRALQQNFLAMAAQLPMSIRINSQASESRQDSAVNLTGTNGSNSIS---M 521
Query: 161 NVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAP--APEKTKSSKKKSSDSDGGVA 218
+V + G +YT A+PPAP P AP K SS + GG
Sbjct: 522 SVEINGIMYTG----------------VLFAQPPAPTPTSAPNKGGGGGGGSSSNAGGRG 565
Query: 219 GD 220
G+
Sbjct: 566 GN 567
>KBF1_DROME (Q94527) Nuclear factor NF-kappa-B p110 subunit (Relish
protein) (Rel-p110) [Contains: Nuclear factor NF-kappa-B
p68 subunit (Rel-p68); Nuclear factor NF-kappa-B p49
subunit (Rel-p49)]
Length = 971
Score = 33.9 bits (76), Expect = 0.38
Identities = 45/183 (24%), Positives = 72/183 (38%), Gaps = 42/183 (22%)
Query: 71 SQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQ-FHLLPTFVSMSNFDTLS- 128
+Q + + G + ND S +S G+ +S S N+ H T ++F L+
Sbjct: 4 NQYYDLDNGKNVMFMNDASSTS---GYSSSTSPNSTNRSFSPAHSPKTMELQTDFANLNL 60
Query: 129 ----NPVRTQAGDDPYR---------LGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLA 175
+P + + PY+ L T+ N ++ G+ NVT G +Y DHQ
Sbjct: 61 PGGNSPHQPPMANSPYQNQLLNNGGICQLGATNLINSTGVSFGVANVTSFGNMYMDHQ-- 118
Query: 176 VYQVDKVLLPRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAVNVKQRRLML 235
+FV PAPA P ++ G+A D D +V Q R++
Sbjct: 119 ------------YFV---PAPATVPPSQNFGYHQN-----GLASDGD--IKHVPQLRIVE 156
Query: 236 VPV 238
PV
Sbjct: 157 QPV 159
>MP83_MYCTU (Q10790) Cell surface lipoprotein MPT83 precursor
(Lipoprotein P23)
Length = 220
Score = 33.5 bits (75), Expect = 0.49
Identities = 29/112 (25%), Positives = 51/112 (44%), Gaps = 15/112 (13%)
Query: 77 NGG-LTLFAPNDNSFSSLKPGFLNSLSDEQK--NKLIQFHLLPTFVSMSNFDTLSNPVRT 133
NGG T+FAP + +F L ++ L + K + ++ +H++ S S D
Sbjct: 118 NGGEYTVFAPTNAAFDKLPAATIDQLKTDAKLLSSILTYHVIAGQASPSRID-------- 169
Query: 134 QAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLP 185
G G ++T G + ++ + GG V+T + VY +D VL+P
Sbjct: 170 --GTHQTLQGADLTVIGARDDLMVNNAGLVCGG-VHTAN-ATVYMIDTVLMP 217
>SAN1_YEAST (P22470) SAN1 protein
Length = 610
Score = 32.7 bits (73), Expect = 0.84
Identities = 47/170 (27%), Positives = 70/170 (40%), Gaps = 27/170 (15%)
Query: 67 TQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDT 126
T +NS NS+ AP++N+ ++ P N+ S EQ F L+P N
Sbjct: 318 TAVNSTNENSS------APSENTSNTTVPTIGNASSGEQMLSRTGFFLVP-----QNGQP 366
Query: 127 LSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPR 186
L NPVR D R G+N SS TT GG+ ++Q + V +P
Sbjct: 367 LHNPVRLPPNDSD-RNGVNGPSS------TTQNPPSNSGGS--NNNQSPRW----VPIPL 413
Query: 187 DFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAVNVKQRRLMLV 236
F P P P+ + +S S ++G + + S A + RL V
Sbjct: 414 TLFQFHSPNPNPSASDSSAS---PSAANGPNSNNTSSDATDPHHNRLRAV 460
>SBN2_HUMAN (Q8WWQ8) Stabilin 2 precursor (FEEL-2 protein)
(Fasciclin EGF-like laminin-type EGF-like and link
domain-containing scavenger receptor-1) (FAS1 EGF-like
and X-link domain containing adhesion molecule-2)
(Hyaluronan receptor for endocytosis) [C
Length = 2551
Score = 32.3 bits (72), Expect = 1.1
Identities = 23/101 (22%), Positives = 49/101 (47%), Gaps = 12/101 (11%)
Query: 78 GGLTLFAPNDNSFSSLKPGFLNSLSDEQKNK----LIQFHLLPTFVSMSNFDTLSNP-VR 132
G T+F PN+ + +++K G L+ L + ++ L+++H++P F + +S P +R
Sbjct: 551 GPYTIFVPNNEALNNMKDGTLDYLLSPEGSRKLLELVRYHIVP-FTQLEVATLISTPHIR 609
Query: 133 TQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTV---GGTVYT 170
+ A + N T +G + + + + G +YT
Sbjct: 610 SMANQ---LIQFNTTDNGQILANDVAMEEIEITAKNGRIYT 647
>SBN1_MOUSE (Q8R4Y4) Stabilin 1 precursor (FEEL-1 protein)
Length = 2571
Score = 32.3 bits (72), Expect = 1.1
Identities = 30/125 (24%), Positives = 58/125 (46%), Gaps = 17/125 (13%)
Query: 19 FSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNG 78
F + T L + P P P D+ T + +IL FT +L+ + + +L+ G
Sbjct: 488 FHTVTALRWQLPPPLPG-DSKKT-VGQILASTEVFTRFETILENCGLPS-----ILDGPG 540
Query: 79 GLTLFAPNDNSFSSLKPG---FLNSLSDEQKNKLIQFHL-------LPTFVSMSNFDTLS 128
T+FAP++ + SL+ G +L + + +L+++H+ + +S T++
Sbjct: 541 PFTVFAPSNEAVDSLRDGRLIYLFTAGLSKLQELVRYHIYNHGQLTVEKLISKGRVLTMA 600
Query: 129 NPVRT 133
N V T
Sbjct: 601 NQVLT 605
>BGH3_PIG (O11780) Transforming growth factor-beta induced protein
IG-H3 precursor (Beta IG-H3) (Kerato-epithelin)
(RGD-containing collagen associated protein) (RGD-CAP)
Length = 683
Score = 32.0 bits (71), Expect = 1.4
Identities = 19/74 (25%), Positives = 38/74 (50%), Gaps = 7/74 (9%)
Query: 43 IIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLS 102
++ +LK F+ L+ +Q+ ++ + LN G T+FAP + +F +L G N L
Sbjct: 505 VMDVLKGDNRFSMLVAAIQSAGLT-----ETLNREGVYTVFAPTNEAFQALPLGERNKLL 559
Query: 103 DEQKN--KLIQFHL 114
K ++++H+
Sbjct: 560 GNAKELANILKYHV 573
Score = 30.4 bits (67), Expect = 4.2
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 30/136 (22%)
Query: 62 TTQVSTQINSQL---LNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKL---IQFHLL 115
TTQ+ T +L + G T+FAP++ +++SL L+SL +L +++H+
Sbjct: 117 TTQLYTDRTEKLRPEMEGPGSFTIFAPSNEAWASLPAEVLDSLVSNVNIELLNALRYHM- 175
Query: 116 PTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVNM-----TTGIVNVTVGGTVYT 170
V + D + G+ +TS N+ GIV V +
Sbjct: 176 ---------------VDRRVLTDELKHGMALTSMYQNSNIQIHHYPNGIVTVNCARLLKA 220
Query: 171 DHQL---AVYQVDKVL 183
DH V+ +DKV+
Sbjct: 221 DHHATNGVVHLIDKVI 236
>BGH3_HUMAN (Q15582) Transforming growth factor-beta induced protein
IG-H3 precursor (Beta IG-H3) (Kerato-epithelin)
(RGD-containing collagen associated protein) (RGD-CAP)
Length = 683
Score = 31.6 bits (70), Expect = 1.9
Identities = 28/128 (21%), Positives = 54/128 (41%), Gaps = 13/128 (10%)
Query: 43 IIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLS 102
++ +LK F+ L+ +Q+ ++ + LN G T+FAP + +F +L P + L
Sbjct: 505 VMDVLKGDNRFSMLVAAIQSAGLT-----ETLNREGVYTVFAPTNEAFRALPPRERSRLL 559
Query: 103 DEQKN--KLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQ------VN 154
+ K ++++H+ + L Q L NV S + +
Sbjct: 560 GDAKELANILKYHIGDEILVSGGIGALVRLKSLQGDKLEVSLKNNVVSVNKEPVAEPDIM 619
Query: 155 MTTGIVNV 162
T G+V+V
Sbjct: 620 ATNGVVHV 627
Score = 31.2 bits (69), Expect = 2.5
Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 30/136 (22%)
Query: 62 TTQVSTQINSQL---LNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKL---IQFHLL 115
TTQ+ T +L + G T+FAP++ +++SL L+SL +L +++H+
Sbjct: 117 TTQLYTDRTEKLRPEMEGPGSFTIFAPSNEAWASLPAEVLDSLVSNVNIELLNALRYHM- 175
Query: 116 PTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVNM-----TTGIVNVTVGGTVYT 170
V + D + G+ +TS N+ GIV V +
Sbjct: 176 ---------------VGRRVLTDELKHGMTLTSMYQNSNIQIHHYPNGIVTVNCARLLKA 220
Query: 171 DHQL---AVYQVDKVL 183
DH V+ +DKV+
Sbjct: 221 DHHATNGVVHLIDKVI 236
>SCD1_SCHPO (P40995) Protein scd1
Length = 872
Score = 31.2 bits (69), Expect = 2.5
Identities = 30/122 (24%), Positives = 56/122 (45%), Gaps = 11/122 (9%)
Query: 19 FSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNG 78
F+ TT+ KS A +TD P+D IR+ + T+ +R QTT S +++++
Sbjct: 613 FTKTTSKDTKS---ATTTDERPSDFIRLNSEESVGTSSLRTSQTT-------STIVSNDS 662
Query: 79 GLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHL-LPTFVSMSNFDTLSNPVRTQAGD 137
T P+ S S LN + +++ + + + S+S F+ S+ + + D
Sbjct: 663 SSTASIPSQISRISQVNSLLNDYNYNRQSHITRVYSGTDDGSSVSIFEDTSSSTKQKIFD 722
Query: 138 DP 139
P
Sbjct: 723 QP 724
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.316 0.132 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,178,480
Number of Sequences: 164201
Number of extensions: 1190580
Number of successful extensions: 5486
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 5440
Number of HSP's gapped (non-prelim): 59
length of query: 250
length of database: 59,974,054
effective HSP length: 108
effective length of query: 142
effective length of database: 42,240,346
effective search space: 5998129132
effective search space used: 5998129132
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 64 (29.3 bits)
Medicago: description of AC139344.5