BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139344.2 - phase: 0
(1591 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from tran... 433 e-120
COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contain... 419 e-116
YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein 150 4e-35
M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810... 131 1e-29
M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820... 109 5e-23
YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B) 107 3e-22
YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein 103 3e-21
YMU0_YEAST (Q04670) Transposon Ty1 protein B 97 5e-19
YME4_YEAST (Q04711) Transposon Ty1 protein B 97 5e-19
YJZ7_YEAST (P47098) Transposon Ty1 protein B 96 8e-19
YMT5_YEAST (Q04214) Transposon Ty1 protein B 95 1e-18
YMD9_YEAST (Q03434) Transposon Ty1 protein B 95 2e-18
YJZ9_YEAST (P47100) Transposon Ty1 protein B 95 2e-18
ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog (X-li... 69 1e-10
USO1_YEAST (P25386) Intracellular protein transport protein USO1 64 4e-09
M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240... 63 6e-09
POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse transcript... 60 5e-08
MST2_DROHY (Q08696) Axoneme-associated protein mst101(2) 57 4e-07
GOA4_HUMAN (Q13439) Golgi autoantigen, golgin subfamily A member... 57 4e-07
POL_SFV1 (P23074) Pol polyprotein [Contains: Protease (EC 3.4.23... 54 3e-06
>POLX_TOBAC (P10978) Retrovirus-related Pol polyprotein from
transposon TNT 1-94 [Contains: Protease (EC 3.4.23.-);
Reverse transcriptase (EC 2.7.7.49); Endonuclease]
Length = 1328
Score = 433 bits (1114), Expect = e-120
Identities = 302/982 (30%), Positives = 485/982 (48%), Gaps = 62/982 (6%)
Query: 626 QKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKV-CLRAREKQRSWYLDSGCSRHMTGEK 684
+K K T+ +K ND L I+ + C+ + W +D+ S H T +
Sbjct: 249 RKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAASHHATPVR 308
Query: 685 ALFLTLTMKDGGEVKFGGNQTGKIIGTGTIG-----NSSISINNVWLVDGLKHNLLSISQ 739
LF D G VK G KI G G I ++ + +V V L+ NL+S
Sbjct: 309 DLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLRMNLISGIA 368
Query: 740 FCDNEYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCLLSMNDKKW- 798
+ Y+ F+ L + KG +Y+ N +C +N +
Sbjct: 369 LDRDGYESYFANQKWRLTK--GSLVIAKGVARGTLYRTNAE-------ICQGELNAAQDE 419
Query: 799 ----VWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIV 854
+WHKR+GH + + + ++K L+ C C GK + SF++
Sbjct: 420 ISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKP---CDYCLFGKQHRVSFQT---- 472
Query: 855 STSRPLELLHI---DLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSF 911
S+ R L +L + D+ GP+ S+ G+KY + +DD SR WV +K+KD +VF F
Sbjct: 473 SSERKLNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKF 532
Query: 912 CTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTL 971
++ E K+ ++RSD+GGE+ + FE +C HGI HE + P TPQ NGV ER NRT+
Sbjct: 533 HALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTI 592
Query: 972 QEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQFG 1031
E R+M+ L K FW EAV T+CY+ NR P+ + ++ + + S+ FG
Sbjct: 593 VEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFG 652
Query: 1032 CTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVKFDDREPGSK 1091
C + K+ K D K+ IF+GY + YR+++ + V S V F + E +
Sbjct: 653 CRAFAHVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTA 712
Query: 1092 TSEQSESNAGTTDSEDASESDQPSDSEKYTKVESSPEAEITPEAESNSEAESSPIVQNES 1151
+ G + PS S T ES+ T E E I Q E
Sbjct: 713 ADMSEKVKNGIIPNFVTI----PSTSNNPTSAEST-----TDEVSEQGEQPGEVIEQGEQ 763
Query: 1152 ASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTV 1211
E ++V P + P + + PR + E ++ + EP+++
Sbjct: 764 LDE----GVEEVEHPTQGEEQHQP----LRRSERPRVESRRYPSTEYVL-ISDDREPESL 814
Query: 1212 EEALS---DDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIETKWVFRNKLNEQGEVTRN 1268
+E LS + + AMQEE+ Q+N + LV P K ++ KWVF+ K + ++ R
Sbjct: 815 KEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRY 874
Query: 1269 KARLVAQGYSQQEGINYTETFAPVARLETIRLLLSYAINHGIILYQMDVKSVFLNGVIEE 1328
KARLV +G+ Q++GI++ E F+PV ++ +IR +LS A + + + Q+DVK+ FL+G +EE
Sbjct: 875 KARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEE 934
Query: 1329 EVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTL-F 1387
E+Y++QP GFE V KL KSLYGLKQAPR WY + +F+ + + D + F
Sbjct: 935 EIYMEQPEGFEVAGKKHMVCKLNKSLYGLKQAPRQWYMKFDSFMKSQTYLKTYSDPCVYF 994
Query: 1388 RRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQI--NQS 1445
+R + + +I+ +YVDD++ + L + + F+M +G + LG++I ++
Sbjct: 995 KRFSENNFIILLLYVDDMLIVGKDKGLIAKLKGDLSKSFDMKDLGPAQQILGMKIVRERT 1054
Query: 1446 KEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQK------LYRGM 1499
+++ Q KY + +L++F +++ K ++TP+ LSK+ T V++K Y
Sbjct: 1055 SRKLWLSQEKYIERVLERFNMKNAKPVSTPLAGHLKLSKKMCPTTVEEKGNMAKVPYSSA 1114
Query: 1500 IGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDY 1558
+GSL+Y + +RPDI +V + +RF +P + H AVK I RYL+GTT L + S D
Sbjct: 1115 VGSLMYAMVCTRPDIAHAVGVVSRFLENPGKEHWEAVKWILRYLRGTTGDCLCFGGS-DP 1173
Query: 1559 KLIGFCDADYAGDRIERKSTSG 1580
L G+ DAD AGD RKS++G
Sbjct: 1174 ILKGYTDADMAGDIDNRKSSTG 1195
Score = 57.8 bits (138), Expect = 2e-07
Identities = 74/324 (22%), Positives = 125/324 (37%), Gaps = 77/324 (23%)
Query: 33 KFNGDPEEFSWWKTNMYSF--------IMGLDEELWDILEDGVDDLDLDEEGAAIDRRIH 84
KFNGD FS W+ M ++ +D + D ++ D DLDE A+ R
Sbjct: 10 KFNGD-NGFSTWQRRMRDLLIQQGLHKVLDVDSKKPDTMK-AEDWADLDERAASAIR--- 64
Query: 85 TPAQKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKNVKEAKALM 144
L+ + II D+ TA+ ++ L + + SK + L
Sbjct: 65 ------LHLSDDVVNNII-------------DEDTARGIWTRLESLYM-SKTL--TNKLY 102
Query: 145 LVHQYELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVASDHVSKILRSLPSRWRPKVTA 204
L Q M + + + F L++ L L D +L SLPS + T
Sbjct: 103 LKKQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSYDNLATT 162
Query: 205 IEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKT-SKSSKAYKASESE 263
I K T+ ++D+ S+L ++E + E + +++ +G++ +SS Y S +
Sbjct: 163 ILHGK--TTIELKDVTSALLLNEKMRKKPEN--QGQALITEGRGRSYQRSSNNYGRSGA- 217
Query: 264 EESPDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHF 323
RG KN K + C+NC +PGHF
Sbjct: 218 ------------------------------------RGKSKNRSKSRVRNCYNCNQPGHF 241
Query: 324 IADCPDLQKEKFKGKSKKSSFNSS 347
DCP+ +K K + +K+ N++
Sbjct: 242 KRDCPNPRKGKGETSGQKNDDNTA 265
>COPI_DROME (P04146) Copia protein (Gag-int-pol protein) [Contains:
Copia VLP protein; Copia protease (EC 3.4.23.-)]
Length = 1409
Score = 419 bits (1076), Expect = e-116
Identities = 293/1000 (29%), Positives = 497/1000 (49%), Gaps = 113/1000 (11%)
Query: 672 LDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIG------NSSISINNVW 725
LDSG S H+ +++L+ T +++ +K + G+ I G + I++ +V
Sbjct: 291 LDSGASDHLINDESLY-TDSVEVVPPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVL 349
Query: 726 LVDGLKHNLLSISQFCDNEYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQ 785
NL+S+ + + + F K+ T ++K+ + + NV INF
Sbjct: 350 FCKEAAGNLMSVKRLQEAGMSIEFDKSGVT-ISKNGLMVVKNSGMLNNVPVINFQ----- 403
Query: 786 KVVCLLSMNDKKW----VWHKRLGHANWRLISKISKLQLVKG---LPNIDYHSDALCGAC 838
S+N K +WH+R GH + + +I + + L N++ + +C C
Sbjct: 404 ----AYSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCE-ICEPC 458
Query: 839 QKGKIVKSSFKS-KDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKF 897
GK + FK KD RPL ++H D+ GP+ +L Y ++ VD ++ +
Sbjct: 459 LNGKQARLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYL 518
Query: 898 IKSKDYACEVFSSFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRT 957
IK K +F F + ++ LK++ + D+G E+ + FC K GI + + P T
Sbjct: 519 IKYKSDVFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHT 578
Query: 958 PQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLE--KTAYE 1015
PQ NGV ER RT+ E ARTM+ L K FW EAV T+ Y+ NRI R +++ KT YE
Sbjct: 579 PQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYE 638
Query: 1016 LFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERS------------K 1063
++ ++P + + FG T Y+ + K+ KFD K+ + IF+GY
Sbjct: 639 MWHNKKPYLKHLRVFGATVYV-HIKNKQGKFDDKSFKSIFVGYEPNGFKLWDAVNEKFIV 697
Query: 1064 AYRVYNSETQCVEESMHVKF------DDREPGSKT----------------SEQSESNAG 1101
A V ET V S VKF D +E +K S++ ++
Sbjct: 698 ARDVVVDETNMVN-SRAVKFETVFLKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQF 756
Query: 1102 TTDSEDASESDQPSDSEKYTKVESSPEAEITPEAESNSEA-ESSPIVQNESAS---EDFQ 1157
DS+++ + P+DS K + E E++ + ++ ES+ NES +D
Sbjct: 757 LKDSKESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHL 816
Query: 1158 DNTQQVIQPKFKHKSSHPEEL---------------IIGSKDSPRRTRSHFRQEESLIGL 1202
+ ++ P +S E L II + +T+ E L
Sbjct: 817 NESKGSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSL 876
Query: 1203 LSII---------EPKTVEEALSDD---GWILAMQEELNQFQRNDVWDLVPKPFQKNIIE 1250
++ P + +E D W A+ ELN + N+ W + +P KNI++
Sbjct: 877 NKVVLNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVD 936
Query: 1251 TKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGINYTETFAPVARLETIRLLLSYAINHGI 1310
++WVF K NE G R KARLVA+G++Q+ I+Y ETFAPVAR+ + R +LS I + +
Sbjct: 937 SRWVFSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNL 996
Query: 1311 ILYQMDVKSVFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSN 1370
++QMDVK+ FLNG ++EE+Y++ P G + D+V KL K++YGLKQA R W++
Sbjct: 997 KVHQMDVKTAFLNGTLKEEIYMRLPQGIS--CNSDNVCKLNKAIYGLKQAARCWFEVFEQ 1054
Query: 1371 FLIKNDFERGQVDTTLF---RRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFE 1427
L + +F VD ++ + + ++I ++ +YVDD++ + + + F + + ++F
Sbjct: 1055 ALKECEFVNSSVDRCIYILDKGNINENIYVL-LYVDDVVIATGDMTRMNNFKRYLMEKFR 1113
Query: 1428 MSMMGELKFFLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTL----S 1483
M+ + E+K F+GI+I ++ +Y+ Q+ Y K++L KF +E+C ++TP+ S
Sbjct: 1114 MTDLNEIKHFIGIRIEMQEDKIYLSQSAYVKKILSKFNMENCNAVSTPLPSKINYELLNS 1173
Query: 1484 KEDTGTVVDQKLYRGMIGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYL 1542
ED T R +IG L+Y + +RPD+ +V + +R+ S +KR+ RYL
Sbjct: 1174 DEDCNTPC-----RSLIGCLMYIMLCTRPDLTTAVNILSRYSSKNNSELWQNLKRVLRYL 1228
Query: 1543 KGTTNLGLLYRKSLDY--KLIGFCDADYAGDRIERKSTSG 1580
KGT ++ L+++K+L + K+IG+ D+D+AG I+RKST+G
Sbjct: 1229 KGTIDMKLIFKKNLAFENKIIGYVDSDWAGSEIDRKSTTG 1268
Score = 34.3 bits (77), Expect = 2.8
Identities = 47/211 (22%), Positives = 79/211 (37%), Gaps = 43/211 (20%)
Query: 119 TAKAMFASLCANFEGSKNVKEAKALMLVHQYELFRMKDDESIEEMYSRFQTLVSGLQILK 178
TA+ + +L A +E A L L + ++ + S+ + F L+S L
Sbjct: 76 TARQILENLDAVYERKSL---ASQLALRKRLLSLKLSSEMSLLSHFHIFDELISELLAAG 132
Query: 179 KSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSL-NEH-ETS 236
D +S +L +LPS + +TAIE + N L++ + + L E+ + N+H +TS
Sbjct: 133 AKIEEMDKISHLLITLPSCYDGIITAIETLSEEN-LTLAFVKNRLLDQEIKIKNDHNDTS 191
Query: 237 KKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQKKF 296
KK + + + T K +N + K KK
Sbjct: 192 KKVMNAIVHNNNNTYK------------------------------NNLFKNRVTKPKKI 221
Query: 297 LSKRGSYKNSKKEDQKGCFNCKKPGHFIADC 327
YK C +C + GH DC
Sbjct: 222 FKGNSKYKVK-------CHHCGREGHIKKDC 245
>YCH4_YEAST (P25600) Transposon Ty5-1 34.5 kDa hypothetical protein
Length = 308
Score = 150 bits (378), Expect = 4e-35
Identities = 84/268 (31%), Positives = 144/268 (53%), Gaps = 2/268 (0%)
Query: 1315 MDVKSVFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIK 1374
MDV + FLN ++E +YVKQPPGF + ++PD+V++L +YGLKQAP W + ++N L K
Sbjct: 1 MDVDTAFLNSTMDEPIYVKQPPGFVNERNPDYVWELYGGMYGLKQAPLLWNEHINNTLKK 60
Query: 1375 NDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGEL 1434
F R + + L+ R+ + + +YVDD++ + + + + + + M +G++
Sbjct: 61 IGFCRHEGEHGLYFRSTSDGPIYIGVYVDDLLVAAPSPKIYDRVKQELTKLYSMKDLGKV 120
Query: 1435 KFFLGIQINQSKEG-VYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQ 1493
FLG+ I+QS G + + Y + + ++ K+ TP+ + L + + + D
Sbjct: 121 DKFLGLNIHQSTNGDITLSLQDYIAKAASESEINTFKLTQTPLCNSKPLFETTSPHLKDI 180
Query: 1494 KLYRGMIGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLY 1552
Y+ ++G LL+ RPDI + V L +RF +PR HL + +R+ RYL T ++ L Y
Sbjct: 181 TPYQSIVGQLLFCANTGRPDISYPVSLLSRFLREPRAIHLESARRVLRYLYTTRSMCLKY 240
Query: 1553 RKSLDYKLIGFCDADYAGDRIERKSTSG 1580
R L +CDA + ST G
Sbjct: 241 RSGSQVALTVYCDASHGAIHDLPHSTGG 268
>M810_ARATH (P92519) Hypothetical mitochondrial protein AtMg00810
(ORF240b)
Length = 240
Score = 131 bits (330), Expect = 1e-29
Identities = 70/192 (36%), Positives = 109/192 (56%), Gaps = 1/192 (0%)
Query: 1400 IYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGELKFFLGIQINQSKEGVYVHQTKYTKE 1459
+YVDDI+ ++ +L + F M +G + +FLGIQI G+++ QTKY ++
Sbjct: 5 LYVDDILLTGSSNTLLNMLIFQLSSTFSMKDLGPVHYFLGIQIKTHPSGLFLSQTKYAEQ 64
Query: 1460 LLKKFKLEDCKVMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCL 1519
+L + DCK M+TP+ P S T D +R ++G+L YLT +RPDI ++V +
Sbjct: 65 ILNNAGMLDCKPMSTPL-PLKLNSSVSTAKYPDPSDFRSIVGALQYLTLTRPDISYAVNI 123
Query: 1520 CARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTS 1579
+ +P + +KR+ RY+KGT GL K+ + FCD+D+AG R+ST+
Sbjct: 124 VCQRMHEPTLADFDLLKRVLRYVKGTIFHGLYIHKNSKLNVQAFCDSDWAGCTSTRRSTT 183
Query: 1580 GNCQFLGENLIS 1591
G C FLG N+IS
Sbjct: 184 GFCTFLGCNIIS 195
>M820_ARATH (P92520) Hypothetical mitochondrial protein AtMg00820
(ORF170)
Length = 170
Score = 109 bits (273), Expect = 5e-23
Identities = 53/99 (53%), Positives = 68/99 (68%)
Query: 1207 EPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIETKWVFRNKLNEQGEVT 1266
EPK+V AL D GW AMQEEL+ RN W LVP P +NI+ KWVF+ KL+ G +
Sbjct: 27 EPKSVIFALKDPGWCQAMQEELDALSRNKTWILVPPPVNQNILGCKWVFKTKLHSDGTLD 86
Query: 1267 RNKARLVAQGYSQQEGINYTETFAPVARLETIRLLLSYA 1305
R KARLVA+G+ Q+EGI + ET++PV R TIR +L+ A
Sbjct: 87 RLKARLVAKGFHQEEGIYFVETYSPVVRTATIRTILNVA 125
>YCB9_YEAST (P25384) Transposon Ty2 protein B (Ty1-17 protein B)
Length = 1770
Score = 107 bits (266), Expect = 3e-22
Identities = 97/368 (26%), Positives = 158/368 (42%), Gaps = 25/368 (6%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPNIDYH---------SDALCGACQKGKIVKSSFKSK 851
H+ LGHAN+R I K K V L D D L G K + VK S
Sbjct: 595 HRMLGHANFRSIQKSLKKNAVTYLKESDIEWSNASTYQCPDCLIGKSTKHRHVKGSRLKY 654
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
+ P + LH D+FGPV+ Y + D+ +R+ WV + + ++ VF+
Sbjct: 655 Q--ESYEPFQYLHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFT 712
Query: 910 SFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNR 969
S I+++ ++L ++ D G E+ N+ F GI +++ + +GV ER NR
Sbjct: 713 SILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNR 772
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL RT++H + L H W AV S I+N + + P +K+A + +I+
Sbjct: 773 TLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSL-VSPKNDKSARQHAGLAGLDITTILP 831
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V D
Sbjct: 832 FG-QPVIVNNHNPDSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQD--- 887
Query: 1089 GSKTSEQSESNAGTTDSED----ASESDQPSDSEKYTKVESSPEAEITPEAESNSEAESS 1144
K S+ + N T +D + +Q + T+ E + +S E S
Sbjct: 888 --KQSKLDQFNYDTLTFDDDLNRLTAHNQSFIEQNETEQSYDQNTESDHDYQSEIEINSD 945
Query: 1145 PIVQNESA 1152
P+V + S+
Sbjct: 946 PLVNDFSS 953
Score = 99.4 bits (246), Expect = 7e-20
Identities = 124/546 (22%), Positives = 245/546 (44%), Gaps = 77/546 (14%)
Query: 1105 SEDASESDQPSDSEKYTKVESSPEAEITPEAESNSEAESSPIVQN--------ESASEDF 1156
S+ A+ + P S K +S + P+ S ++S + ++ ++S
Sbjct: 1121 SDHATPNIMPDKSSKNVTADSILDDLPLPDLTHQSPTDTSDVSKDIPHIHSRQTNSSLGG 1180
Query: 1157 QDNTQQVIQPKFKHKSSHPEELIIG-SKDS----------PRRTRSHFRQEESLIGLLSI 1205
D++ + K K +S E I S+D+ P R++ ++ G+ SI
Sbjct: 1181 MDDSNVLTTTKSKKRSLEDNETEIEVSRDTWNNKNMRSLEPPRSKKRINLIAAIKGVKSI 1240
Query: 1206 IEPKTV---EEALS-------DDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIETKWVF 1255
+T +EA++ D ++ A +E++Q + + WD K + +N I+ K V
Sbjct: 1241 KPVRTTLRYDEAITYNKDNKEKDRYVEAYHKEISQLLKMNTWD-TNKYYDRNDIDPKKVI 1299
Query: 1256 RNKL--NEQGEVTRNKARLVAQGYSQQEGINYTETFAPVARLETIRLLLSYAINHGIILY 1313
+ N++ + T +KAR VA+G Q ++ + + LS A+++ +
Sbjct: 1300 NSMFIFNKKRDGT-HKARFVARGDIQHPDTYDSDMQSNTVHHYALMTSLSIALDNDYYIT 1358
Query: 1314 QMDVKSVFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLI 1373
Q+D+ S +L I+EE+Y++ PP L D + +L+KSLYGLKQ+ WY+ + ++LI
Sbjct: 1359 QLDISSAYLYADIKEELYIRPPP---HLGLNDKLLRLRKSLYGLKQSGANWYETIKSYLI 1415
Query: 1374 K-NDFERGQVDTTLFRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMM- 1431
D + + + +F K + + ++VDD+I S + + K+ ++ +++ ++
Sbjct: 1416 NCCDMQEVRGWSCVF----KNSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIIN 1471
Query: 1432 -----GELKF-FLGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHPTCTLSKE 1485
E+++ LG++I + +KY K ++K E +N P++P +
Sbjct: 1472 LGESDNEIQYDILGLEIKYQR-------SKYMKLGMEKSLTEKLPKLNVPLNPKGKKLRA 1524
Query: 1486 --DTGTVVDQ------------KLY--RGMIGSLLYLTAS-RPDILFSVCLCARFQSDPR 1528
G +DQ K++ + +IG Y+ R D+L+ + A+ P
Sbjct: 1525 PGQPGHYIDQDELEIDEDEYKEKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPS 1584
Query: 1529 ESHLTAVKRIFRYLKGTTNLGLLYRKSL----DYKLIGFCDADYAGDRIERKSTSGNCQF 1584
L + +++ T + L++ K+ D KL+ DA Y G++ KS GN
Sbjct: 1585 RQVLDMTYELIQFMWDTRDKQLIWHKNKPTKPDNKLVAISDASY-GNQPYYKSQIGNIFL 1643
Query: 1585 LGENLI 1590
L +I
Sbjct: 1644 LNGKVI 1649
>YJL3_YEAST (P47024) Transposon Ty4 207.7 kDa hypothetical protein
Length = 1803
Score = 103 bits (258), Expect = 3e-21
Identities = 120/525 (22%), Positives = 224/525 (41%), Gaps = 47/525 (8%)
Query: 1103 TDSEDASESDQPSDSEKYTKVE-----SSPEAEITPEAESNSEAESSPI-VQNESASEDF 1156
+D D + Q ++ K KV + ++P E N EA SP+ N+SA +
Sbjct: 1157 SDQTDMESNCQDGNNLKELKVTDKNVPTDNGTNVSPRLEQNIEASGSPVQTVNKSAFLNK 1216
Query: 1157 QDNTQQVIQPKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTV--EEA 1214
+ ++ + + + +H ++ +D R ++ + + +S + + + EA
Sbjct: 1217 EFSSLNMKRKRKRHDKNNSLTSYELERDKKRSKKNRVKLIPDNMETVSAPKIRAIYYNEA 1276
Query: 1215 LSDDG-------WILAMQEELNQFQRNDVWDLVPKPFQKNIIETKWVFRNKLNEQGEVTR 1267
+S + + A +EL + V+D+ K + I + V N + +
Sbjct: 1277 ISKNPDLKEKHEYKQAYHKELQNLKDMKVFDVDVKYSRSEIPDNLIVPTNTIFTKKRNGI 1336
Query: 1268 NKARLVAQGYSQQEGINYTETFAPVARLETIRLLLSYAINHGIILYQMDVKSVFLNGVIE 1327
KAR+V +G +Q Y+ I++ L A N + + +D+ FL +E
Sbjct: 1337 YKARIVCRGDTQSPD-TYSVITTESLNHNHIKIFLMIANNRNMFMKTLDINHAFLYAKLE 1395
Query: 1328 EEVYVKQPPGFEDLKHPDH-VYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTL 1386
EE+Y+ P H V KL K+LYGLKQ+P+ W D L +L + L
Sbjct: 1396 EEIYIPHP-------HDRRCVVKLNKALYGLKQSPKEWNDHLRQYLNGIGLKDNSYTPGL 1448
Query: 1387 FRRTLKKDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMGEL------KFFLGI 1440
++ K L++ +YVDD + ++N EF ++ FE+ + G L LG+
Sbjct: 1449 YQTEDKN--LMIAVYVDDCVIAASNEQRLDEFINKLKSNFELKITGTLIDDVLDTDILGM 1506
Query: 1441 QINQSKEGVYVHQT--KYTKELLKKFKLEDCKVMNTPMHPTCTLS---KEDTGTVVDQKL 1495
+ +K + T + + KK+ E K+ + + T K+D + +++
Sbjct: 1507 DLVYNKRLGTIDLTLKSFINRMDKKYNEELKKIRKSSIPHMSTYKIDPKKDVLQMSEEEF 1566
Query: 1496 YRG------MIGSLLYLT-ASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNL 1548
+G ++G L Y+ R DI F+V AR + P E + +I +YL ++
Sbjct: 1567 RQGVLKLQQLLGELNYVRHKCRYDIEFAVKKVARLVNYPHERVFYMIYKIIQYLVRYKDI 1626
Query: 1549 GLLYRK--SLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLIS 1591
G+ Y + + D K+I DA G + +S G + G N+ +
Sbjct: 1627 GIHYDRDCNKDKKVIAITDAS-VGSEYDAQSRIGVILWYGMNIFN 1670
Score = 81.6 bits (200), Expect = 2e-14
Identities = 91/392 (23%), Positives = 166/392 (42%), Gaps = 47/392 (11%)
Query: 646 VLNDQKPLSIHPKVCLRAREKQRSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQT 705
V N+QK + K + ++ +D+G ++T +K L N++
Sbjct: 388 VQNEQKSWNKTQKRSNKVYNSKKLVIIDTGSGVNITNDKTLLHNYE---------DSNRS 438
Query: 706 GKIIGTGTIGNSSISINN---VWLVDGLKH--NLLSISQFCDNEYDVTFS------KTNC 754
+ G G NSS+S+ + + +G + N ++ + E S KT
Sbjct: 439 TRFFGIGK--NSSVSVKGYGYIKIKNGHNNTDNKCLLTYYVPEEESTIISCYDLAKKTKM 496
Query: 755 TLVNK----DDKSITFKGKRVENVYKINFSDLA-----DQKVVCL-------LSMNDKKW 798
L K +K I K K V V + ++L D K+ + +N +
Sbjct: 497 VLSRKYTRLGNKIIKIKTKIVNGVIHVKMNELIERPSDDSKINAIKPTSSPGFKLNKRSI 556
Query: 799 VW---HKRLGHANWRLI-SKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIV 854
HKR+GH + I + I + L I ++ C C+ K K + + +
Sbjct: 557 TLEDAHKRMGHTGIQQIENSIKHNHYEESLDLIKEPNEFWCQTCKISKATKRNHYTGSMN 616
Query: 855 STS---RPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRW--TWVKFIKSKDYACEVFS 909
+ S P +D+FGPV++++ +Y L++VD+ +R+ T F K+ +
Sbjct: 617 NHSTDHEPGSSWCMDIFGPVSSSNADTKRYMLIMVDNNTRYCMTSTHFNKNAETILAQVR 676
Query: 910 SFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNR 969
++++ + K+ ++ SD G EF N+ E + GI H +S + NG ER R
Sbjct: 677 KNIQYVETQFDRKVREINSDRGTEFTNDQIEEYFISKGIHHILTSTQDHAANGRAERYIR 736
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQN 1001
T+ A T++ ++NL FW AV ++ I+N
Sbjct: 737 TIITDATTLLRQSNLRVKFWEYAVTSATNIRN 768
>YMU0_YEAST (Q04670) Transposon Ty1 protein B
Length = 1328
Score = 96.7 bits (239), Expect = 5e-19
Identities = 99/406 (24%), Positives = 186/406 (45%), Gaps = 56/406 (13%)
Query: 1220 WILAMQEELNQFQRNDVWDLVPKPFQKNIIETKWVFRNKL--NEQGEVTRNKARLVAQGY 1277
+I A +E+NQ + WD + + + I+ K V + N + + T +KAR VA+G
Sbjct: 823 YIQAYHKEVNQLLKMKTWD-TDRYYDRKEIDPKRVINSMFIFNRKRDGT-HKARFVARG- 879
Query: 1278 SQQEGINYTETFAPVARLETIR-----LLLSYAINHGIILYQMDVKSVFLNGVIEEEVYV 1332
I + +T+ P + T+ LS A+++ + Q+D+ S +L I+EE+Y+
Sbjct: 880 ----DIQHPDTYDPGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYI 935
Query: 1333 KQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLK 1392
+ PP L D + +LKKSLYGLKQ+ WY+ + ++LIK + G + + K
Sbjct: 936 RPPP---HLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFK 989
Query: 1393 KDILIVQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMM------GELKF-FLGIQINQS 1445
+ + ++VDD+I S + + K+ ++ +++ ++ E+++ LG++I
Sbjct: 990 NSQVTICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQ 1049
Query: 1446 KEGVYVHQTKYTKELLKKFKLEDCKVMNTPMHP--TCTLSKEDTGTVVDQK--------- 1494
+ KY K ++ E +N P++P + G +DQ+
Sbjct: 1050 R-------GKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDY 1102
Query: 1495 -----LYRGMIGSLLYLTAS-RPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNL 1548
+ +IG Y+ R D+L+ + A+ P + L + +++ T +
Sbjct: 1103 KMKVHEMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDK 1162
Query: 1549 GLLYRKSLDY----KLIGFCDADYAGDRIERKSTSGNCQFLGENLI 1590
L++ KS KL+ DA Y G++ KS GN L +I
Sbjct: 1163 QLIWHKSKPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVI 1207
Score = 94.7 bits (234), Expect = 2e-18
Identities = 87/372 (23%), Positives = 160/372 (42%), Gaps = 31/372 (8%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPN--------IDYHS-DALCGACQKGKIVKSSFKSK 851
H+ L HAN + I K + IDY D L G K + +K S
Sbjct: 172 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 231
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
++ P + LH D+FGPV+ Y + D+ +++ WV + + +D +VF+
Sbjct: 232 Q--NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFT 289
Query: 910 SFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNR 969
+ I+++ + +L ++ D G E+ N F EK+GI +++ + +GV ER NR
Sbjct: 290 TILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNR 349
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL + RT + + L H W A+ S ++N + P +K+A + +IS
Sbjct: 350 TLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-ASPKSKKSARQHAGLAGLDISTLLP 408
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V +E
Sbjct: 409 FG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKES 467
Query: 1089 G---------------SKTSEQSESNAGTTDSEDASESDQPSDSEKYTKVESSPEAEITP 1133
++ + +S + + + + + + SD + + +E PE
Sbjct: 468 RLDQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNV 527
Query: 1134 EAESNSEAESSP 1145
+++ S +S+P
Sbjct: 528 LSKAVSPTDSTP 539
>YME4_YEAST (Q04711) Transposon Ty1 protein B
Length = 1328
Score = 96.7 bits (239), Expect = 5e-19
Identities = 98/401 (24%), Positives = 184/401 (45%), Gaps = 46/401 (11%)
Query: 1220 WILAMQEELNQFQRNDVWDLVPKPFQKNIIETKWVFRNKL--NEQGEVTRNKARLVAQGY 1277
+I A +E+NQ + + WD K + + I+ K V + N + + T +KAR VA+G
Sbjct: 823 YIEAYHKEVNQLLKMNTWD-TDKYYDRKEIDPKRVINSMFIFNRKRDGT-HKARFVARGD 880
Query: 1278 SQQEGINYTETFAPVARLETIRLLLSYAINHGIILYQMDVKSVFLNGVIEEEVYVKQPPG 1337
Q + + + LS A+++ + Q+D+ S +L I+EE+Y++ PP
Sbjct: 881 IQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPP- 939
Query: 1338 FEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILI 1397
L D + +LKKSLYGLKQ+ WY+ + ++LIK + G + + K +
Sbjct: 940 --HLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVT 994
Query: 1398 VQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMM------GELKF-FLGIQINQSKEGVY 1450
+ ++VDD+I S + + K+ ++ +++ ++ E+++ LG++I +
Sbjct: 995 ICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQR---- 1050
Query: 1451 VHQTKYTKELLKKFKLEDCKVMNTPMHP--TCTLSKEDTGTVVDQ------------KLY 1496
KY K ++ E +N P++P + G +DQ K++
Sbjct: 1051 ---GKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVH 1107
Query: 1497 --RGMIGSLLYLTAS-RPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYR 1553
+ +IG Y+ R D+L+ + A+ P L + +++ T + L++
Sbjct: 1108 EMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWH 1167
Query: 1554 KSL----DYKLIGFCDADYAGDRIERKSTSGNCQFLGENLI 1590
K+ D KL+ DA Y G++ KS GN L +I
Sbjct: 1168 KNKPTEPDNKLVAISDASY-GNQPYYKSQIGNIYLLNGKVI 1207
Score = 94.7 bits (234), Expect = 2e-18
Identities = 87/372 (23%), Positives = 160/372 (42%), Gaps = 31/372 (8%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPN--------IDYHS-DALCGACQKGKIVKSSFKSK 851
H+ L HAN + I K + IDY D L G K + +K S
Sbjct: 172 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 231
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
++ P + LH D+FGPV+ Y + D+ +++ WV + + +D +VF+
Sbjct: 232 Q--NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFT 289
Query: 910 SFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNR 969
+ I+++ + +L ++ D G E+ N F EK+GI +++ + +GV ER NR
Sbjct: 290 TILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNR 349
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL + RT + + L H W A+ S ++N + P +K+A + +IS
Sbjct: 350 TLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-ASPKSKKSARQHAGLAGLDISTLLP 408
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V +E
Sbjct: 409 FG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKES 467
Query: 1089 G---------------SKTSEQSESNAGTTDSEDASESDQPSDSEKYTKVESSPEAEITP 1133
++ + +S + + + + + + SD + + +E PE
Sbjct: 468 RLDQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNV 527
Query: 1134 EAESNSEAESSP 1145
+++ S +S+P
Sbjct: 528 LSKAVSPTDSTP 539
>YJZ7_YEAST (P47098) Transposon Ty1 protein B
Length = 1755
Score = 95.9 bits (237), Expect = 8e-19
Identities = 87/372 (23%), Positives = 162/372 (43%), Gaps = 31/372 (8%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPN--------IDYHS-DALCGACQKGKIVKSSFKSK 851
H+ L HAN + I K + IDY D L G K + +K S
Sbjct: 599 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 658
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
++ P + LH D+FGPV+ Y + D+ +++ WV + + +D +VF+
Sbjct: 659 Q--NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFT 716
Query: 910 SFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNR 969
+ I+++ + +L ++ D G E+ N F EK+GI +++ + +GV ER NR
Sbjct: 717 TILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNR 776
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL + RT + + L H W A+ S ++N + P +K+A + +IS
Sbjct: 777 TLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-ASPKSKKSARQHAGLAGLDISTLLP 835
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V +E
Sbjct: 836 FG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKES 894
Query: 1089 G---------------SKTSEQSESNAGTTDSEDASESDQPSDSEKYTKVESSPEAEITP 1133
++ + +S + + +++++ + SD + + +E PE
Sbjct: 895 RLDQFNYDALTFDEDLNRLTASYQSFIASNEIQESNDLNIESDHDFQSDIELHPEQPRNV 954
Query: 1134 EAESNSEAESSP 1145
+++ S +S+P
Sbjct: 955 LSKAVSPTDSTP 966
Score = 92.8 bits (229), Expect = 7e-18
Identities = 97/401 (24%), Positives = 183/401 (45%), Gaps = 46/401 (11%)
Query: 1220 WILAMQEELNQFQRNDVWDLVPKPFQKNIIETKWVFRNKL--NEQGEVTRNKARLVAQGY 1277
+I A +E+NQ + WD + + + I+ K V + N++ + T +KAR VA+G
Sbjct: 1250 YIEAYHKEVNQLLKMKTWD-TDEYYDRKEIDPKRVINSMFIFNKKRDGT-HKARFVARGD 1307
Query: 1278 SQQEGINYTETFAPVARLETIRLLLSYAINHGIILYQMDVKSVFLNGVIEEEVYVKQPPG 1337
Q T + + LS A+++ + Q+D+ S +L I+EE+Y++ PP
Sbjct: 1308 IQHPDTYDTGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPP- 1366
Query: 1338 FEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILI 1397
L D + +LKKS YGLKQ+ WY+ + ++LIK + G + + K +
Sbjct: 1367 --HLGMNDKLIRLKKSHYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVT 1421
Query: 1398 VQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMM------GELKF-FLGIQINQSKEGVY 1450
+ ++VDD+I S + + K+ ++ +++ ++ E+++ LG++I +
Sbjct: 1422 ICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQR---- 1477
Query: 1451 VHQTKYTKELLKKFKLEDCKVMNTPMHP--TCTLSKEDTGTVVDQ------------KLY 1496
KY K ++ E +N P++P + G +DQ K++
Sbjct: 1478 ---GKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVH 1534
Query: 1497 --RGMIGSLLYLTAS-RPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYR 1553
+ +IG Y+ R D+L+ + A+ P L + +++ T + L++
Sbjct: 1535 EMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWH 1594
Query: 1554 KSL----DYKLIGFCDADYAGDRIERKSTSGNCQFLGENLI 1590
K+ D KL+ DA Y G++ KS GN L +I
Sbjct: 1595 KNKPTEPDNKLVAISDASY-GNQPYYKSQIGNIFLLNGKVI 1634
>YMT5_YEAST (Q04214) Transposon Ty1 protein B
Length = 1328
Score = 95.1 bits (235), Expect = 1e-18
Identities = 130/574 (22%), Positives = 242/574 (41%), Gaps = 74/574 (12%)
Query: 1073 QCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTKVESSPEAEIT 1132
Q E+ + R P TS SESN+ + P ++ + + + P ++
Sbjct: 652 QTSEQETEKRIIHRSPSIDTSS-SESNSLHHVVPIKTSDTCPKENTEESIIADLPLPDLP 710
Query: 1133 PEAE---SNSEAESSPIVQ---NESASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKDS- 1185
PE S+S E PI N S N I K + + E+ + S+D+
Sbjct: 711 PEPPTELSDSFKELPPINSRQTNSSLGGIGDSNAYTTINSKKRSLEDNETEIKV-SRDTW 769
Query: 1186 ---------PRRTRSHFRQEESLIGLLSIIEPKTV---EEALS-------DDGWILAMQE 1226
P R++ ++ + SI +T +EA++ + +I A +
Sbjct: 770 NTKNMRSLEPPRSKKRIHLIAAVKAVKSIKPIRTTLRYDEAITYNKDIKEKEKYIEAYHK 829
Query: 1227 ELNQFQRNDVWDLVPKPFQKNIIETKWVFRNKL--NEQGEVTRNKARLVAQGYSQQEGIN 1284
E+NQ + WD K + + I+ K V + N + + T +KAR VA+G Q
Sbjct: 830 EVNQLLKMKTWD-TDKYYDRKEIDPKRVINSMFIFNRKRDGT-HKARFVARGDIQHPDTY 887
Query: 1285 YTETFAPVARLETIRLLLSYAINHGIILYQMDVKSVFLNGVIEEEVYVKQPPGFEDLKHP 1344
+ + + LS A+++ + Q+D+ S +L I+EE+Y++ PP L
Sbjct: 888 DSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPP---HLGMN 944
Query: 1345 DHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILIVQIYVDD 1404
D + +LKKSLYGLKQ+ WY+ + ++LIK + G + + + + + ++VDD
Sbjct: 945 DKLIRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFENSQVTICLFVDD 1001
Query: 1405 IIFGSTNASLCKEFSKLMQDEFEMSMMG------ELKF-FLGIQINQSKEGVYVHQTKYT 1457
++ S N + K ++ +++ ++ E+++ LG++I + KY
Sbjct: 1002 MVLFSKNLNSNKRIIDKLKMQYDTKIINLGESDEEIQYDILGLEIKYQR-------GKYM 1054
Query: 1458 KELLKKFKLEDCKVMNTPMHP--TCTLSKEDTGTVVDQK--------------LYRGMIG 1501
K ++ E +N P++P + G +DQ+ + +IG
Sbjct: 1055 KLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVHEMQKLIG 1114
Query: 1502 SLLYLTAS-RPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDY-- 1558
Y+ R D+L+ + A+ P + L + +++ T + L++ KS
Sbjct: 1115 LASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWHKSKPVKP 1174
Query: 1559 --KLIGFCDADYAGDRIERKSTSGNCQFLGENLI 1590
KL+ DA Y G++ KS GN L +I
Sbjct: 1175 TNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVI 1207
Score = 93.6 bits (231), Expect = 4e-18
Identities = 87/372 (23%), Positives = 160/372 (42%), Gaps = 31/372 (8%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPN--------IDYHS-DALCGACQKGKIVKSSFKSK 851
H+ L HAN + I K + IDY D L G K + +K S
Sbjct: 172 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 231
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
++ P + LH D+FGPV+ Y + D+ +++ WV + + +D +VF+
Sbjct: 232 Q--NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFT 289
Query: 910 SFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNR 969
+ I+++ + +L ++ D G E+ N F EK+GI +++ + +GV ER NR
Sbjct: 290 TILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNR 349
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL + RT + + L H W A+ S ++N + P +K+A + +IS
Sbjct: 350 TLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-ASPKSKKSARQHAGLAGLDISTLLP 408
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V +E
Sbjct: 409 FG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKES 467
Query: 1089 G---------------SKTSEQSESNAGTTDSEDASESDQPSDSEKYTKVESSPEAEITP 1133
++ + S + + + +++ + SD + + +E PE
Sbjct: 468 RLDQFNYDALTFDEDLNRLTASYHSFIASNEIQQSNDLNIESDHDFQSDIELHPEQLRNV 527
Query: 1134 EAESNSEAESSP 1145
+++ S +S+P
Sbjct: 528 LSKAVSPTDSTP 539
>YMD9_YEAST (Q03434) Transposon Ty1 protein B
Length = 1328
Score = 94.7 bits (234), Expect = 2e-18
Identities = 97/401 (24%), Positives = 184/401 (45%), Gaps = 46/401 (11%)
Query: 1220 WILAMQEELNQFQRNDVWDLVPKPFQKNIIETKWVFRNKL--NEQGEVTRNKARLVAQGY 1277
+I A +E+NQ + WD + + + I+ K V + N++ + T +KAR VA+G
Sbjct: 823 YIEAYHKEVNQLLKMKTWD-TDEYYDRKEIDPKRVINSMFIFNKKRDGT-HKARFVARGD 880
Query: 1278 SQQEGINYTETFAPVARLETIRLLLSYAINHGIILYQMDVKSVFLNGVIEEEVYVKQPPG 1337
Q + + + LS A+++ + Q+D+ S +L I+EE+Y++ PP
Sbjct: 881 IQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPP- 939
Query: 1338 FEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILI 1397
L D + +LKKSLYGLKQ+ WY+ + ++LIK + G + + K +
Sbjct: 940 --HLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIK---QCGMEEVRGWSCVFKNSQVT 994
Query: 1398 VQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMM------GELKF-FLGIQINQSKEGVY 1450
+ ++VDD+I S + + K+ ++ +++ ++ E+++ LG++I +
Sbjct: 995 ICLFVDDMILFSKDLNANKKIITTLKKQYDTKIINLGESDNEIQYDILGLEIKYQR---- 1050
Query: 1451 VHQTKYTKELLKKFKLEDCKVMNTPMHP--TCTLSKEDTGTVVDQ------------KLY 1496
KY K ++ E +N P++P + G +DQ K++
Sbjct: 1051 ---GKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQDELEIDEDEYKEKVH 1107
Query: 1497 --RGMIGSLLYLTAS-RPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYR 1553
+ +IG Y+ R D+L+ + A+ P L + +++ T + L++
Sbjct: 1108 EMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSRQVLDMTYELIQFMWDTRDKQLIWH 1167
Query: 1554 KSL----DYKLIGFCDADYAGDRIERKSTSGNCQFLGENLI 1590
K+ D KL+ DA Y G++ KS GN L +I
Sbjct: 1168 KNKPTEPDNKLVAISDASY-GNQPYYKSQIGNIYLLNGKVI 1207
Score = 94.7 bits (234), Expect = 2e-18
Identities = 87/372 (23%), Positives = 160/372 (42%), Gaps = 31/372 (8%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPN--------IDYHS-DALCGACQKGKIVKSSFKSK 851
H+ L HAN + I K + IDY D L G K + +K S
Sbjct: 172 HRMLAHANAQTIRYSLKNNTITYFNESDVDRSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 231
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
++ P + LH D+FGPV+ Y + D+ +++ WV + + +D +VF+
Sbjct: 232 Q--NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFT 289
Query: 910 SFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNR 969
+ I+++ + +L ++ D G E+ N F EK+GI +++ + +GV ER NR
Sbjct: 290 TILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNR 349
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL + RT + + L H W A+ S ++N + P +K+A + +IS
Sbjct: 350 TLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-ASPKSKKSARQHAGLAGLDISTLLP 408
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V +E
Sbjct: 409 FG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKES 467
Query: 1089 G---------------SKTSEQSESNAGTTDSEDASESDQPSDSEKYTKVESSPEAEITP 1133
++ + +S + + + + + + SD + + +E PE
Sbjct: 468 RLDQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNV 527
Query: 1134 EAESNSEAESSP 1145
+++ S +S+P
Sbjct: 528 LSKAVSPTDSTP 539
>YJZ9_YEAST (P47100) Transposon Ty1 protein B
Length = 1755
Score = 94.7 bits (234), Expect = 2e-18
Identities = 87/372 (23%), Positives = 160/372 (42%), Gaps = 31/372 (8%)
Query: 801 HKRLGHANWRLISKISKLQLVKGLPN--------IDYHS-DALCGACQKGKIVKSSFKSK 851
H+ L HAN + I K + IDY D L G K + +K S
Sbjct: 599 HRMLAHANAQTIRYSLKNNTITYFNESDVDWSSAIDYQCPDCLIGKSTKHRHIKGSRLKY 658
Query: 852 DIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI--KSKDYACEVFS 909
++ P + LH D+FGPV+ Y + D+ +++ WV + + +D +VF+
Sbjct: 659 Q--NSYEPFQYLHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFT 716
Query: 910 SFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNR 969
+ I+++ + +L ++ D G E+ N F EK+GI +++ + +GV ER NR
Sbjct: 717 TILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNR 776
Query: 970 TLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQ 1029
TL + RT + + L H W A+ S ++N + P +K+A + +IS
Sbjct: 777 TLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSL-ASPKSKKSARQHAGLAGLDISTLLP 835
Query: 1030 FGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVY-NSETQCVEESMHVKFDDREP 1088
FG I+N + K + G L S S Y +Y S + V+ + +V +E
Sbjct: 836 FG-QPVIVNDHNPNSKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKES 894
Query: 1089 G---------------SKTSEQSESNAGTTDSEDASESDQPSDSEKYTKVESSPEAEITP 1133
++ + +S + + + + + + SD + + +E PE
Sbjct: 895 RLDQFNYDALTFDEDLNRLTASYQSFIASNEIQQSDDLNIESDHDFQSDIELHPEQPRNV 954
Query: 1134 EAESNSEAESSP 1145
+++ S +S+P
Sbjct: 955 LSKAVSPTDSTP 966
Score = 92.0 bits (227), Expect = 1e-17
Identities = 95/401 (23%), Positives = 182/401 (44%), Gaps = 46/401 (11%)
Query: 1220 WILAMQEELNQFQRNDVWDLVPKPFQKNIIETKWVFRNKL--NEQGEVTRNKARLVAQGY 1277
+I A +E+NQ + WD + + + I+ K V + N++ + T +KAR VA+G
Sbjct: 1250 YIEAYHKEVNQLLKMKTWD-TDEYYDRKEIDPKRVINSMFIFNKKRDGT-HKARFVARGD 1307
Query: 1278 SQQEGINYTETFAPVARLETIRLLLSYAINHGIILYQMDVKSVFLNGVIEEEVYVKQPPG 1337
Q + + + LS A+++ + Q+D+ S +L I+EE+Y++ PP
Sbjct: 1308 IQHPDTYDSGMQSNTVHHYALMTSLSLALDNNYYITQLDISSAYLYADIKEELYIRPPP- 1366
Query: 1338 FEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRRTLKKDILI 1397
L D + +LKKSLYGLKQ+ WY+ + ++LI+ + G + + K +
Sbjct: 1367 --HLGMNDKLIRLKKSLYGLKQSGANWYETIKSYLIQ---QCGMEEVRGWSCVFKNSQVT 1421
Query: 1398 VQIYVDDIIFGSTNASLCKEFSKLMQDEFEMSMMG------ELKF-FLGIQINQSKEGVY 1450
+ ++VDD++ S N + K + ++ +++ ++ E+++ LG++I +
Sbjct: 1422 ICLFVDDMVLFSKNLNSNKRIIEKLKMQYDTKIINLGESDEEIQYDILGLEIKYQR---- 1477
Query: 1451 VHQTKYTKELLKKFKLEDCKVMNTPMHP--TCTLSKEDTGTVVDQK-------------- 1494
KY K ++ E +N P++P + G +DQ+
Sbjct: 1478 ---GKYMKLGMENSLTEKIPKLNVPLNPKGRKLSAPGQPGLYIDQQELELEEDDYKMKVH 1534
Query: 1495 LYRGMIGSLLYLTAS-RPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYR 1553
+ +IG Y+ R D+L+ + A+ P + L + +++ T + L++
Sbjct: 1535 EMQKLIGLASYVGYKFRFDLLYYINTLAQHILFPSKQVLDMTYELIQFIWNTRDKQLIWH 1594
Query: 1554 KSLDY----KLIGFCDADYAGDRIERKSTSGNCQFLGENLI 1590
KS KL+ DA Y G++ KS GN L +I
Sbjct: 1595 KSKPVKPTNKLVVISDASY-GNQPYYKSQIGNIYLLNGKVI 1634
>ATRX_CAEEL (Q9U7E0) Transcriptional regulator ATRX homolog
(X-linked nuclear protein-1)
Length = 1359
Score = 68.9 bits (167), Expect = 1e-10
Identities = 73/265 (27%), Positives = 121/265 (45%), Gaps = 13/265 (4%)
Query: 231 NEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLA 290
+E E KKSKS + K KS K S SE+E D D + +Q K K + +
Sbjct: 96 DEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDE--DSDEEREQKSKKKSKKTKKQTSS 153
Query: 291 RKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKG---KSKKSSFNSS 347
++ +R K SKK +K + + K+ KG K+K S + S
Sbjct: 154 ESSEESEEER-KVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESES 212
Query: 348 KFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAMGLVATVSSEAVSEAE-SDSEDENE 406
+ K++KKS + + + ES S+ +EA + K + SSE SE+E SD E+E +
Sbjct: 213 EDEKEVKKSKKKSKKVVKKESESE-DEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEK 271
Query: 407 VYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLELKASEEELKGFN 466
S P+++ ++K+L S E +++ L +K K+ TL+ E++ K +
Sbjct: 272 ESSPKPKKKKPLAVKKLSSDEESEESDVEVLPQK----KKRGAVTLISDSEDEKDQKSES 327
Query: 467 LISTTYEDRLKSLCQKLQEKCDKGS 491
S E+++ K QE + GS
Sbjct: 328 EASDV-EEKVSKKKAKKQESSESGS 351
Score = 57.4 bits (137), Expect = 3e-07
Identities = 69/268 (25%), Positives = 115/268 (42%), Gaps = 16/268 (5%)
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEES 266
E D + + EDL + ++ + K K + +K KAS SEE+
Sbjct: 9 EDSDGHVIEDEDLEMARQIENERKEKRAQKLKEKREREGKPPPKKRPAKKRKASSSEEDD 68
Query: 267 PDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIA- 325
D + +S K + K E + + + ++ S K+ KK DQK KK +
Sbjct: 69 DDEEESPRKSSKKSRKRAKSESESDESDEEEDRKKS-KSKKKVDQKKKEKSKKKRTTSSS 127
Query: 326 ---DCPDLQKEKFKGKSKKS-------SFNSSKFRKQIKKSLMATWEDLDSESGSDKEEA 375
D + +++K K KSKK+ S S+ +++KKS E + EE+
Sbjct: 128 EDEDSDEEREQKSKKKSKKTKKQTSSESSEESEEERKVKKS-KKNKEKSVKKRAETSEES 186
Query: 376 DDDAKAAMGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNELT 435
D+D K + + +A SE+ES+SEDE EV + + V KE S E + T
Sbjct: 187 DEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVK-KESESEDEAPEKKKT 245
Query: 436 DLKEKYVDLMKQQKSTLLELKASEEELK 463
+ +++ ++S+ E EEE K
Sbjct: 246 EKRKR--SKTSSEESSESEKSDEEEEEK 271
Score = 44.7 bits (104), Expect = 0.002
Identities = 84/419 (20%), Positives = 158/419 (37%), Gaps = 54/419 (12%)
Query: 262 SEEESPDGDSDEDQSVKMA--MLSNKLEYLARK------------QKKFLSKRGSYKNSK 307
SE E DG ED+ ++MA + + + E A+K KK +K+ +S+
Sbjct: 6 SESEDSDGHVIEDEDLEMARQIENERKEKRAQKLKEKREREGKPPPKKRPAKKRKASSSE 65
Query: 308 KED-------QKGCFNCKKPGHFIADCPDLQKEKFKGKSK-KSSFNSSKFRKQIKKSLMA 359
++D +K +K ++ + +E+ + KSK K + K K KK +
Sbjct: 66 EDDDDEEESPRKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTS 125
Query: 360 TWEDLDSESGSDKEEADDDAKAAMGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDS 419
+ ED DS+ +++ K + SE+ +SE+E +V K ++ S
Sbjct: 126 SSEDEDSDEEREQKSKKKSKK--------TKKQTSSESSEESEEERKV--KKSKKNKEKS 175
Query: 420 LKELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSL 479
+K+ E + K+ L K+ KS E+E+K S +
Sbjct: 176 VKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKESES 235
Query: 480 CQKLQEKCDKGSGNKHEIALDDFIMAGIDRSKVASMIYSTYKNKGKGIGYSEEKSKEYSL 539
+ EK + + + ++ + + S K K + + S E S
Sbjct: 236 EDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESE 295
Query: 540 KSYCDCIKDGLKSTFVPEGTNAVTVV---------QSKPEASGSQAKITSKPENLKIKVM 590
+S + + K AVT++ +S+ EAS + K++ K +
Sbjct: 296 ESDVEVLPQKKK-------RGAVTLISDSEDEKDQKSESEASDVEEKVSKKKAKKQESSE 348
Query: 591 TKSDPKSQKIKILKRS------EPVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVK 643
+ SD I + ++S E + +I SK+ K+ +A K + K K
Sbjct: 349 SGSDSSEGSITVNRKSKKKEKPEKKKKGIIMDSSKLQKETIDAERAEKERRKRLEKKQK 407
Score = 40.4 bits (93), Expect = 0.039
Identities = 64/344 (18%), Positives = 135/344 (38%), Gaps = 21/344 (6%)
Query: 333 EKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAMGLVATVSSE 392
+K K K ++ K R K+ ++ ED D E S ++ + K A
Sbjct: 37 QKLKEKREREGKPPPKKRPAKKRKASSSEEDDDDEEESPRKSSKKSRKRAK--------- 87
Query: 393 AVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRT----NELTDLKEKYVDLMKQQ 448
SE+ESD DE E K ++ VD K+ S + T +E +D + + K +
Sbjct: 88 --SESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSK 145
Query: 449 KSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQ--EKCDKGS--GNKHEIALDDFIM 504
K+ S EE + + + +++ KS+ ++ + E+ D+ K + L
Sbjct: 146 KTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAK 205
Query: 505 AGIDRSKVASMIYSTYKNKGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTFVPEGTNAVTV 564
+ + K K K + E +S++ + + K T E + +
Sbjct: 206 SESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEKK-KTEKRKRSKTSSEESSESEKS 264
Query: 565 VQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRSEPVHQNLIKPESKIPKQK 624
+ + E S KP +K K+ + + + +++L + + + +S+ K +
Sbjct: 265 DEEEEEKESSPKPKKKKPLAVK-KLSSDEESEESDVEVLPQKKKRGAVTLISDSEDEKDQ 323
Query: 625 DQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQR 668
+++A+ EK K K + ++ S + + + K++
Sbjct: 324 KSESEASDVEEKVSKKKAKKQESSESGSDSSEGSITVNRKSKKK 367
Score = 37.0 bits (84), Expect = 0.43
Identities = 33/170 (19%), Positives = 76/170 (44%), Gaps = 19/170 (11%)
Query: 1061 RSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEK- 1119
+ K+ +V E++ +E+ K ++ SKTS + S + +D E+ + P +K
Sbjct: 222 KKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKK 281
Query: 1120 ---YTKVESSPEA-----EITPEAESN------SEAESSPIVQNESASEDFQDNTQQVIQ 1165
K+ S E+ E+ P+ + S++E ++ES + D ++ + +
Sbjct: 282 PLAVKKLSSDEESEESDVEVLPQKKKRGAVTLISDSEDEKDQKSESEASDVEEKVSKK-K 340
Query: 1166 PKFKHKSSHPEELIIGSKDSPRRTRSHFRQEESLIGLL---SIIEPKTVE 1212
K + S + GS R+++ + E+ G++ S ++ +T++
Sbjct: 341 AKKQESSESGSDSSEGSITVNRKSKKKEKPEKKKKGIIMDSSKLQKETID 390
Score = 34.7 bits (78), Expect = 2.1
Identities = 39/166 (23%), Positives = 70/166 (41%), Gaps = 26/166 (15%)
Query: 1048 AKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSED 1107
+K+++ + E+SK R +S E+S D E K+ ++S+ T SE
Sbjct: 104 SKSKKKVDQKKKEKSKKKRTTSSSED--EDS------DEEREQKSKKKSKKTKKQTSSES 155
Query: 1108 ASESDQPSDSEKYTKVESSPEAEITPEAESNSEAESSPIVQN----------ESASEDFQ 1157
+ ES+ + K K + + E + AE++ E++ +S SE
Sbjct: 156 SEESE---EERKVKKSKKNKEKSVKKRAETSEESDEDEKPSKKSKKGLKKKAKSESESES 212
Query: 1158 DNTQQVIQPKFK-----HKSSHPEELIIGSKDSPRRTRSHFRQEES 1198
++ ++V + K K K S E+ K + +R RS EES
Sbjct: 213 EDEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRSKTSSEES 258
Score = 34.3 bits (77), Expect = 2.8
Identities = 33/145 (22%), Positives = 61/145 (41%), Gaps = 16/145 (11%)
Query: 1060 ERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEK 1119
ER + + + +T+ S + + E K S++++ + +E + ESD+ K
Sbjct: 135 EREQKSKKKSKKTKKQTSSESSEESEEERKVKKSKKNKEKSVKKRAETSEESDEDEKPSK 194
Query: 1120 YTKVESSPEAEITPEAESNSEAE-------SSPIVQNESASEDFQDNTQQVIQPKFKHKS 1172
+K +A+ E+ES E E S +V+ ES SED + K K+
Sbjct: 195 KSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKESESED---------EAPEKKKT 245
Query: 1173 SHPEELIIGSKDSPRRTRSHFRQEE 1197
+ S++S +S +EE
Sbjct: 246 EKRKRSKTSSEESSESEKSDEEEEE 270
Score = 34.3 bits (77), Expect = 2.8
Identities = 47/211 (22%), Positives = 83/211 (39%), Gaps = 22/211 (10%)
Query: 1060 ERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASE-SDQPSDSE 1118
E+S R SE +E K + G K +SES + +SED E S+
Sbjct: 173 EKSVKKRAETSEESDEDEKPSKK---SKKGLKKKAKSESES---ESEDEKEVKKSKKKSK 226
Query: 1119 KYTKVESSPEAEITPEAESNSEAESSPIVQNESASEDFQDNTQQVIQPKFKHKSSHPEEL 1178
K K ES E E PE + + + S ES+ + D ++ + K K P +
Sbjct: 227 KVVKKESESEDE-APEKKKTEKRKRSKTSSEESSESEKSDEEEEEKESSPKPKKKKPLAV 285
Query: 1179 IIGSKDSPRRTRSHFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWD 1238
++ S EES + +L + + +SD ++E +Q ++ D
Sbjct: 286 --------KKLSSDEESEESDVEVLPQKKKRGAVTLISDS------EDEKDQKSESEASD 331
Query: 1239 LVPKPFQKNIIETKWVFRNKLNEQGEVTRNK 1269
+ K +K + + + +G +T N+
Sbjct: 332 VEEKVSKKKAKKQESSESGSDSSEGSITVNR 362
Score = 33.9 bits (76), Expect = 3.7
Identities = 64/330 (19%), Positives = 126/330 (37%), Gaps = 28/330 (8%)
Query: 108 RTEYMKMSDKSTAKAMFASLCANFEGSKNVKEAKALMLVHQYELFRMKDDESIEEMYSRF 167
R + K K T K + E + VK++K ++ + + + + S E
Sbjct: 136 REQKSKKKSKKTKKQTSSESSEESEEERKVKKSKK----NKEKSVKKRAETSEESDEDEK 191
Query: 168 QTLVSGLQILKKSYVASDHVSKILRSLP-SRWRPKVTAIEEAKDLNTLSVEDLVSSLKVH 226
+ S + KK+ S+ S+ + + S+ + K +E++ + + K
Sbjct: 192 PSKKSKKGLKKKAKSESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEKKKTEKRKRS 251
Query: 227 EMSLNEHETSKKS-------KSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKM 279
+ S E S+KS +S P K K K ESEE + + + +
Sbjct: 252 KTSSEESSESEKSDEEEEEKESSPKPKKKKPLAVKKLSSDEESEESDVEVLPQKKKRGAV 311
Query: 280 AMLSNKLEYLARKQKKFLS---KRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFK 336
++S+ + +K + S ++ S K +KK++ + G + +KEK +
Sbjct: 312 TLISDSEDEKDQKSESEASDVEEKVSKKKAKKQESSESGSDSSEGSITVNRKSKKKEKPE 371
Query: 337 GKSKKSSFNSSKFRKQI----------KKSLMATWEDLDS---ESGSDKEEADDDAKAAM 383
K K +SSK +K+ +K L ++ + E G D E +
Sbjct: 372 KKKKGIIMDSSKLQKETIDAERAEKERRKRLEKKQKEFNGIVLEEGEDLTEMLTGTSSQR 431
Query: 384 GLVATVSSEAVSEAESDSEDENEVYSKIPR 413
L + V S + +S+ EV++ + R
Sbjct: 432 KLKSVVLDPDSSTVDEESKKPVEVHNSLVR 461
>USO1_YEAST (P25386) Intracellular protein transport protein USO1
Length = 1790
Score = 63.5 bits (153), Expect = 4e-09
Identities = 123/651 (18%), Positives = 266/651 (39%), Gaps = 98/651 (15%)
Query: 6 ESVTTKYTSVKHDYDTADKKTDSGKAPKFNGDPEEFSWWKTNMYSFIMGLDE--ELWDIL 63
E++T K ++ +++ D+K + + E FS +T + + LDE +L D+L
Sbjct: 758 ENLTEKLIALTNEHKELDEKYQILNS-SHSSLKENFSILETELKNVRDSLDEMTQLRDVL 816
Query: 64 EDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAM 123
E D + + A ++ + Q+ K K I++ + E A+
Sbjct: 817 ETK----DKENQTALLEYKSTIHKQEDSIKTLEKGLETILSQKKKAEDGINKMGKDLFAL 872
Query: 124 FASLCANFEGSKNVKEAKALMLV-HQYELFRMKDDESIEEMYSRFQTLVSGLQILK---- 178
+ A E KN+++ K V HQ E +K+D I + + + L+ +K
Sbjct: 873 SREMQAVEENCKNLQKEKDKSNVNHQKETKSLKED--IAAKITEIKAINENLEEMKIQCN 930
Query: 179 KSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKK 238
+H+SK L SR++ S ++LV+ L ++K
Sbjct: 931 NLSKEKEHISKELVEYKSRFQ---------------SHDNLVAKL------------TEK 963
Query: 239 SKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQKKFLS 298
KS+A K +++ KA E +S + S++++ L NK++ ++++++ F
Sbjct: 964 LKSLANNYKDMQAENESLIKAVE--------ESKNESSIQLSNLQNKIDSMSQEKENFQI 1015
Query: 299 KRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLM 358
+RGS + + ++ +K + ++ I D K++++ + S +++++ +
Sbjct: 1016 ERGSIEKNIEQLKKTISDLEQTKEEIISKSDSSKDEYESQ-------ISLLKEKLETATT 1068
Query: 359 ATWEDLD--SESGSDKEEADDDAKAAMGLVATVSSEAVSEAESDSEDENEVYSKIPRQEL 416
A E+++ SE +EE + + A L +NE+ +K+ E
Sbjct: 1069 ANDENVNKISELTKTREELEAELAAYKNL------------------KNELETKLETSE- 1109
Query: 417 VDSLKELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRL 476
+LKE+ EH E L+++ + +Q S L++ E+E + YE+++
Sbjct: 1110 -KALKEVKENEEHLKEEKIQLEKEATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQI 1168
Query: 477 KSLCQKLQEKCDKGSGNKHEIALDDFIMAGIDRSKVASMIYSTYKNKGKGIGYSEEKSKE 536
+ ++ E+ + L+D I + ++ + + K + + E+
Sbjct: 1169 ANKERQYNEEISQ---------LNDEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSN 1219
Query: 537 YSLKSYCDCIKDGLKSTFVPEGTNAVTVVQSKPEASGSQAKI----------TSKPENLK 586
KS D + +K TN ++++S KI + L+
Sbjct: 1220 LK-KSEIDALNLQIKELKKKNETNEASLLESIKSVESETVKIKELQDECNFKEKEVSELE 1278
Query: 587 IKVMTKSDPKSQKIKILKRSEPVHQNLIKPESKIPKQKDQKNKAATASEKT 637
K+ D S+ +++ K SE + + L +++ Q ++ + A EK+
Sbjct: 1279 DKLKASEDKNSKYLELQKESEKIKEELDAKTTELKIQLEKITNLSKAKEKS 1329
Score = 44.7 bits (104), Expect = 0.002
Identities = 89/383 (23%), Positives = 156/383 (40%), Gaps = 42/383 (10%)
Query: 117 KSTAKAMFASLCANFEGSKNVKEAKALMLVHQYELFRMKDDESIEEMYSRFQTLVSGLQI 176
K A L E N+ +AK + EL R+K S E + Q L+
Sbjct: 1302 KEELDAKTTELKIQLEKITNLSKAKEKS---ESELSRLKKTSSEERKNAEEQ-----LEK 1353
Query: 177 LKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETS 236
LK + + R L + +T E ++ +NTL ED + L+ NE+E
Sbjct: 1354 LKNEIQIKNQAFEKERKLLNEGSSTITQ-EYSEKINTL--EDELIRLQ------NENE-- 1402
Query: 237 KKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQKKF 296
L +K + S+ K S S +E + + +S++ +LS K + + R +K
Sbjct: 1403 -------LKAKEIDNTRSELEKVSLSNDELLEEKQNTIKSLQDEILSYK-DKITRNDEKL 1454
Query: 297 LSKRGSYKN---SKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQI 353
LS K S KE + K + + K K + +KS K I
Sbjct: 1455 LSIERDNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTI 1514
Query: 354 K------KSLMATWEDLDSESGSDKEEADDDAKAAMGLVATVSSEAVSEAESDSED-ENE 406
+ KS M T D + K+ A++D K + + S ++E+E D E+ +++
Sbjct: 1515 ESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISR-INESEKDIEELKSK 1573
Query: 407 VYSKIPRQELVDSLKELLSLFEHR----TNELTDLKEKYVDLMKQQKSTLLELKASEEEL 462
+ + ++++K+ L+ + + E T LK K D+ ++ K E+K+++EE
Sbjct: 1574 LRIEAKSGSELETVKQELNNAQEKIRINAEENTVLKSKLEDIERELKDKQAEIKSNQEEK 1633
Query: 463 KGFNLISTTYEDRLKSLCQKLQE 485
+ E L S QK Q+
Sbjct: 1634 ELLTSRLKELEQELDSTQQKAQK 1656
Score = 39.3 bits (90), Expect = 0.087
Identities = 72/356 (20%), Positives = 138/356 (38%), Gaps = 25/356 (7%)
Query: 56 DEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQ---KKLYKKHHKIRGIIVASIPRTEYM 112
DE+L I D DL+ +E + + KKL ++ K + + S + +
Sbjct: 1451 DEKLLSIERDNKRDLESLKEQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKL 1510
Query: 113 KMSDKSTAKAMFASLCANFEGSKNVKEAKALMLVHQYELFRMKDD--ESIEEMYSRFQTL 170
+ + +S + +S+ + + ++++K L K D I E + L
Sbjct: 1511 ESTIESNETELKSSMETIRKSDEKLEQSKKSAEEDIKNLQHEKSDLISRINESEKDIEEL 1570
Query: 171 VSGLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSL 230
S L+I KS + V + L + + K+ E + +ED+ LK + +
Sbjct: 1571 KSKLRIEAKSGSELETVKQELNNA----QEKIRINAEENTVLKSKLEDIERELKDKQAEI 1626
Query: 231 NEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLA 290
++ K+ + L + S++ KA +SEEE V+ + L K L
Sbjct: 1627 KSNQEEKELLTSRLKELEQELDSTQQ-KAQKSEEERRA--EVRKFQVEKSQLDEKAMLLE 1683
Query: 291 RKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFR 350
K ++K ++K + +K + ++ + L KE K++ S +
Sbjct: 1684 TKYNDLVNKEQAWKRDEDTVKKTTDSQRQ------EIEKLAKELDNLKAENSKLKEANED 1737
Query: 351 KQIKKSLMATWEDLDSESGSDKEEADDDAKAAMGLVATVSSEAVSEAESDSEDENE 406
+ LM DLD ++ + + D L +SS+ + E D EDE E
Sbjct: 1738 RSEIDDLMLLVTDLDEKNAKYRSKLKD-------LGVEISSDEEDDEEDDEEDEEE 1786
Score = 38.5 bits (88), Expect = 0.15
Identities = 89/446 (19%), Positives = 170/446 (37%), Gaps = 45/446 (10%)
Query: 204 AIEEAKDLNTLSV---------EDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSS 254
A E + LN+L EDL + LK +E + E + S+ +
Sbjct: 1133 ATETKQQLNSLRANLESLEKEHEDLAAQLKKYEEQIANKERQYNEE---------ISQLN 1183
Query: 255 KAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGC 314
+++ E ES +DE + AM S E K+ + + K KK+++
Sbjct: 1184 DEITSTQQENESIKKKNDELEGEVKAMKSTSEEQSNLKKSEIDALNLQIKELKKKNETN- 1242
Query: 315 FNCKKPGHFIADCPDLQKEKFKGKSKKSSFNS-----SKFRKQIKKSLMATWEDLDSESG 369
+ ++ E K K + N S+ ++K S + L+ +
Sbjct: 1243 -----EASLLESIKSVESETVKIKELQDECNFKEKEVSELEDKLKASEDKNSKYLELQKE 1297
Query: 370 SDKEEADDDAKAAMGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEH 429
S+K + + DAK + +S+A+ SE E K +E ++ +E L ++
Sbjct: 1298 SEKIKEELDAKTTELKIQLEKITNLSKAKEKSESELSRLKKTSSEERKNA-EEQLEKLKN 1356
Query: 430 RTNELTDLKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQEKCDK 489
EK L+ + ST+ + + + LI E+ LK+ ++ D
Sbjct: 1357 EIQIKNQAFEKERKLLNEGSSTITQEYSEKINTLEDELIRLQNENELKA------KEIDN 1410
Query: 490 GSGNKHEIALDDFIMAGIDRSKVASMIYSTYKNKGKGIGYSEEK--SKEYSLKSYCDCIK 547
+++L + + ++ + S+ K K I ++EK S E K + +K
Sbjct: 1411 TRSELEKVSLSNDELLEEKQNTIKSLQDEILSYKDK-ITRNDEKLLSIERDNKRDLESLK 1469
Query: 548 DGLKS-----TFVPEGTNAVTVVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKI 602
+ L++ V EG + SK +A ++K K I+ +++ KS I
Sbjct: 1470 EQLRAAQESKAKVEEGLKKLEEESSKEKAELEKSKEMMKKLESTIE-SNETELKSSMETI 1528
Query: 603 LKRSEPVHQNLIKPESKIPKQKDQKN 628
K E + Q+ E I + +K+
Sbjct: 1529 RKSDEKLEQSKKSAEEDIKNLQHEKS 1554
>M240_ARATH (P93290) Hypothetical mitochondrial protein AtMg00240
(ORF111a)
Length = 111
Score = 63.2 bits (152), Expect = 6e-09
Identities = 30/82 (36%), Positives = 48/82 (57%)
Query: 1504 LYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGF 1563
+YLT +RPD+ F+V ++F S R + + AV ++ Y+KGT GL Y + D +L F
Sbjct: 1 MYLTITRPDLTFAVNRLSQFSSASRTAQMQAVYKVLHYVKGTVGQGLFYSATSDLQLKAF 60
Query: 1564 CDADYAGDRIERKSTSGNCQFL 1585
D+D+A R+S +G C +
Sbjct: 61 ADSDWASCPDTRRSVTGFCSLV 82
>POL_FOAMV (P14350) Pol polyprotein [Contains: Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)]
Length = 886
Score = 60.1 bits (144), Expect = 5e-08
Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 16/199 (8%)
Query: 836 GACQKGKIVKSSFKSKDIV----STSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSR 891
G CQ+ I +S K+ + +P + ID GP+ + G Y LV+VD +
Sbjct: 648 GRCQQCLITNASNKASGPILRPDRPQKPFDKFFIDYIGPLPPSQ--GYLYVLVVVDGMTG 705
Query: 892 WTWVKFIKSKDYACEVFS-SFCTQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILH 950
+TW+ K+ + V S + T I K + SD G F + F + ++ GI
Sbjct: 706 FTWLYPTKAPSTSATVKSLNVLTSIAIPKV-----IHSDQGAAFTSSTFAEWAKERGIHL 760
Query: 951 EFSSPRTPQQNGVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLE 1010
EFS+P PQ VERKN ++ + ++ W + + N Y P+L+
Sbjct: 761 EFSTPYHPQSGSKVERKNSDIKRLLTKLLVGRPTK---WYDLLPVVQLALNNTY-SPVLK 816
Query: 1011 KTAYELFKGRRPNISYFHQ 1029
T ++L G N + +Q
Sbjct: 817 YTPHQLLFGIDSNTPFANQ 835
>MST2_DROHY (Q08696) Axoneme-associated protein mst101(2)
Length = 1391
Score = 57.0 bits (136), Expect = 4e-07
Identities = 101/498 (20%), Positives = 177/498 (35%), Gaps = 26/498 (5%)
Query: 185 DHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIAL 244
+ ++K ++ + + K A +E + E+L +K ET+KK K +A
Sbjct: 432 EELAKNIKKAAEKKKCKEAAKKEKEAAERKKCEELAKKIKKAAEKKKCEETAKKGKEVAE 491
Query: 245 PSK--------GKTSKSSKAYKASESEEESPDGDSDEDQSVKM--AMLSNKLEYLARKQK 294
K K K K ++ E+E+ + E + K A K E A+K+K
Sbjct: 492 RKKCEELAKKIKKAEIKKKCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKCEKAAKKRK 551
Query: 295 KFLSKRGSYKNSKKEDQKG-CFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQI 353
+ K+ K++KK + C+K + + +K + K +K K +
Sbjct: 552 EAAEKKKCEKSAKKRKEAAEKKKCEKAAKERKEAAEKKKCEEAAKKEKEVAERKKCEELA 611
Query: 354 KKSLMATWEDLDSESGSDKEEADDDAKAAMGLVATVSSEAVSEAESDSEDENEVYSKIPR 413
KK A + E+ ++EA + K + + + ++ E E K
Sbjct: 612 KKIKKAAEKKKCKEAAKKEKEAAEREKCGELAKKIKKAAEKKKCKKLAKKEKETAEKKKC 671
Query: 414 QELVDSLKELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYE 473
++ KE E + KEK K+ + + K + E K L +
Sbjct: 672 EKAAKKRKEAA---EKKKCAEAAKKEKEAAEKKKCEEAAKKEKEAAERKKCEELAKKIKK 728
Query: 474 DRLKSLCQKLQEKCDKGSGNKHEIALDDFIMAGIDRSKVASMIYSTYKNKGKGIGYSEEK 533
K C+KL +K G NK + G + K A + K ++K
Sbjct: 729 AAEKKKCKKLAKKKKAGEKNK--------LKKGNKKGKKALKEKKKCRELAKKKAAEKKK 780
Query: 534 SKEYSLKSYCDCIKDGLKSTFVPEGTNAVTVVQSKPEASGSQAKITSKPENLKIKVMTKS 593
KE + K K + T A K +A K E K ++
Sbjct: 781 CKEAAKKEKEAAEKKKCEKTAKKRKEEAEKKKCEKTAKKRKEAAEKKKCEKAAKKRKEEA 840
Query: 594 DPKSQKIKILKRSEPVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPK---VLNDQ 650
+ K + KR E + + +K KQ +K K A++K K K +
Sbjct: 841 EKKKCEKTAKKRKETAEKKKCEKAAKKRKQAAEKKKCEKAAKKRKEAAEKKKCAEAAKKE 900
Query: 651 KPLSIHPKVCLRAREKQR 668
K L+ K C A +K++
Sbjct: 901 KELA-EKKKCEEAAKKEK 917
Score = 55.1 bits (131), Expect = 2e-06
Identities = 93/475 (19%), Positives = 185/475 (38%), Gaps = 81/475 (17%)
Query: 224 KVHEMSLNEHETSKKSK-SIALPSKGKTSKSSKAYKASESEEESPDGDSDED--QSVKMA 280
K E + E + ++K K A + + ++ K +A++ E+E+ + E+ +++K A
Sbjct: 382 KCEEAANKEKKAAEKKKCEKAAKERKEAAEKKKCEEAAKKEKEAAERKKCEELAKNIKKA 441
Query: 281 MLSNKLEYLARKQKKFLSKRGSYKNSKK----EDQKGCFNCKKPGHFIAD---CPDLQKE 333
K + A+K+K+ ++ + +KK ++K C K G +A+ C +L K+
Sbjct: 442 AEKKKCKEAAKKEKEAAERKKCEELAKKIKKAAEKKKCEETAKKGKEVAERKKCEELAKK 501
Query: 334 ----------KFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAM 383
K K +K + K K KK A + ++ ++EA + K
Sbjct: 502 IKKAEIKKKCKKLAKKEKETAEKKKCEKAAKKRKEAAEKKKCEKAAKKRKEAAEKKKCEK 561
Query: 384 GLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKYVD 443
+ + E +++ E K +E KE+ + EL +K +
Sbjct: 562 SAKKRKEAAEKKKCEKAAKERKEAAEKKKCEEAAKKEKEVAE--RKKCEELAKKIKKAAE 619
Query: 444 LMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKL---------QEKCDKGSGNK 494
K +++ E +A+E E G L + K C+KL ++KC+K + +
Sbjct: 620 KKKCKEAAKKEKEAAEREKCG-ELAKKIKKAAEKKKCKKLAKKEKETAEKKKCEKAAKKR 678
Query: 495 HEIALDDFIMAGIDRSKVASMIYSTYKNKGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTF 554
E A ++ K A + +K KE + K C+
Sbjct: 679 KEAA---------EKKKCAE---------------AAKKEKEAAEKKKCE---------- 704
Query: 555 VPEGTNAVTVVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIKILKRSEPVHQNLI 614
+K E ++ K K E L K+ ++ K K K+ K+ + +N +
Sbjct: 705 ----------EAAKKEKEAAERK---KCEELAKKIKKAAEKKKCK-KLAKKKKAGEKNKL 750
Query: 615 KPESKIPKQK-DQKNKAATASEKTIPKGVKPKVLNDQKPLSIHPKVCLRAREKQR 668
K +K K+ +K K ++K + K K ++ + K C + +K++
Sbjct: 751 KKGNKKGKKALKEKKKCRELAKKKAAEKKKCKEAAKKEKEAAEKKKCEKTAKKRK 805
Score = 50.1 bits (118), Expect = 5e-05
Identities = 98/475 (20%), Positives = 169/475 (34%), Gaps = 79/475 (16%)
Query: 224 KVHEMSLNEHETSKKSKSIALPSKGKT-SKSSKAYKASESEEESPDGDSDED--QSVKMA 280
K + + E ++K K K K ++ K +A++ E+E + E+ + +K A
Sbjct: 876 KCEKAAKKRKEAAEKKKCAEAAKKEKELAEKKKCEEAAKKEKEVAERKKCEELAKKIKKA 935
Query: 281 MLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSK 340
K + LA+K+KK G KK+ KG CKK G + +K K +
Sbjct: 936 AEKKKCKKLAKKEKK----AGEKNKLKKKAGKGKKKCKKLGKKSKRAAEKKKCAEAAKKE 991
Query: 341 KSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAMGLVATVSSEAVSEAESD 400
K + K ++ KK + ++K++ ++ AK + + E
Sbjct: 992 KEAATKKKCEERAKK----------QKEAAEKKQCEERAKKLK------EAAEQKQCEER 1035
Query: 401 SEDENEVYSKIPRQELVDSLKELL--SLFEHRTNELTDLKE-KYVDLMKQQKSTLLELKA 457
++ E K +E LKE E R +L + E K + +++ E K
Sbjct: 1036 AKKLKEAAEKKQCEERAKKLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKEKEAAEKKQ 1095
Query: 458 SEEELKGFNLISTTYEDRLKSLCQKLQEKCDKGSGNKHEIALDDFIMAGIDRSKVASMIY 517
EE K +LK +K Q C++ + + E A R K A+
Sbjct: 1096 CEERAK-----------KLKEAAEKKQ--CEERAKKEKEAAEKKRCEEAAKREKEAA--- 1139
Query: 518 STYKNKGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTFVPEGTNAVTVVQSKPEASGSQAK 577
+ K + +K KE + K C EA+ + +
Sbjct: 1140 -----EKKKCAEAAKKEKEATEKQKC-------------------------AEAAKKEKE 1169
Query: 578 ITSKPENLKIKVMTKSDPKSQKIKIL--KRSEPVHQNLIKPESKIPKQKDQKNKAATASE 635
K + + K + +K L K EP + +K K+ +K K A A++
Sbjct: 1170 AAEKKKCAEAAKREKEAAQKKKCADLAKKEQEPAEMKKCEEAAKKEKEAAEKQKCAKAAK 1229
Query: 636 KTIPKGVKPKVLNDQK--PLSIHPKVCLRAREKQRSWYLDSGCSRHMTGEKALFL 688
K K K K + K C A +K++ C + EKA L
Sbjct: 1230 KEKEAAEKKKCAEAAKKEQEAAEKKKCAEAAKKEKEAEKKRKCEK---AEKAAAL 1281
Score = 47.4 bits (111), Expect = 3e-04
Identities = 107/508 (21%), Positives = 182/508 (35%), Gaps = 74/508 (14%)
Query: 201 KVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKAS 260
K A EEAK + +V +K E KK K + K + K A A
Sbjct: 306 KEQAEEEAK------IRGVVKEVK---KKCKEKALKKKCKDLGRKMKEEAEKKKCAALAK 356
Query: 261 ESEEESPDGDSDE-DQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKK 319
+ +EE E + K A K E A K+KK K+ K +K ++K KK
Sbjct: 357 KQKEEDEKKACKELAKKKKEADEKKKCEEAANKEKKAAEKKKCEKAAK--ERKEAAEKKK 414
Query: 320 PGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDA 379
C + K++ + +K + K IKK+ E + + KE+ +
Sbjct: 415 -------CEEAAKKEKEAAERK---KCEELAKNIKKAA----EKKKCKEAAKKEKEAAER 460
Query: 380 KAAMGLVATVSSEA-VSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRTNELTDLK 438
K L + A + E ++ EV + +EL +K+ ++K
Sbjct: 461 KKCEELAKKIKKAAEKKKCEETAKKGKEVAERKKCEELAKKIKK------------AEIK 508
Query: 439 EKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKL---------QEKCDK 489
+K L K++K T E K E+ K E K C+K ++KC+K
Sbjct: 509 KKCKKLAKKEKET-AEKKKCEKAAK------KRKEAAEKKKCEKAAKKRKEAAEKKKCEK 561
Query: 490 GSGNKHEIALDDFIMAGIDRSKVASMIYSTYKNKGKGIGYSEEKSKEYSLKSYCD----C 545
+ + E A K A+ + K + +K KE + + C+
Sbjct: 562 SAKKRKEAAEKKKCEKAAKERKEAA--------EKKKCEEAAKKEKEVAERKKCEELAKK 613
Query: 546 IKDGLKSTFVPEGTNAVTVVQSKPEASGSQAKITSKPENLKIKVMTKSDPKSQKIK---- 601
IK + E + + KI E K K + K + ++ + K
Sbjct: 614 IKKAAEKKKCKEAAKKEKEAAEREKCGELAKKIKKAAEKKKCKKLAKKEKETAEKKKCEK 673
Query: 602 -ILKRSEPVHQNLIKPESKIPKQKDQKNKA--ATASEKTIPKGVKPKVLNDQKPLSIHPK 658
KR E + +K K+ +K K A EK + K + L + + K
Sbjct: 674 AAKKRKEAAEKKKCAEAAKKEKEAAEKKKCEEAAKKEKEAAERKKCEELAKKIKKAAEKK 733
Query: 659 VCLRAREKQRSWYLDSGCSRHMTGEKAL 686
C + +K+++ + + G+KAL
Sbjct: 734 KCKKLAKKKKAGEKNKLKKGNKKGKKAL 761
Score = 40.4 bits (93), Expect = 0.039
Identities = 86/482 (17%), Positives = 177/482 (35%), Gaps = 42/482 (8%)
Query: 201 KVTAIEEAKDLNTLS--VEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYK 258
K + E K L+ ++ K +++ E + +K+K KGK K
Sbjct: 915 KEKEVAERKKCEELAKKIKKAAEKKKCKKLAKKEKKAGEKNKLKKKAGKGKKKCKKLGKK 974
Query: 259 ASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNSKK----EDQKGC 314
+ + E+ ++ + + K A K E A+KQK+ K+ + +KK +QK C
Sbjct: 975 SKRAAEKKKCAEAAKKE--KEAATKKKCEERAKKQKEAAEKKQCEERAKKLKEAAEQKQC 1032
Query: 315 FNCKKPGHFIAD---CPDLQKEKFKGKSKKSSFNSSKFRKQIKKSLMATWEDLDSESGSD 371
K A+ C + K+ + +K +K K+ + + ++
Sbjct: 1033 EERAKKLKEAAEKKQCEERAKKLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKEKEAAE 1092
Query: 372 KEEADDDAKAAMGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKELLSLFEHRT 431
K++ ++ AK E ++ E ++ ++ R++ K+ + +
Sbjct: 1093 KKQCEERAKKLKEAAEKKQCEERAKKEKEAAEKKRCEEAAKREKEAAEKKKCAEAAK-KE 1151
Query: 432 NELTDLKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQKLQE-----K 486
E T+ K+K + K++K + K +E + + + L +K QE K
Sbjct: 1152 KEATE-KQKCAEAAKKEKEAAEKKKCAEAAKRE---KEAAQKKKCADLAKKEQEPAEMKK 1207
Query: 487 CDKGSGNKHEIALDDFIMAGIDRSKVASMIYSTYK--------NKGKGIGYSEEKSKEYS 538
C++ + + E A + K A+ + + K + +K KE
Sbjct: 1208 CEEAAKKEKEAAEKQKCAKAAKKEKEAAEKKKCAEAAKKEQEAAEKKKCAEAAKKEKEAE 1267
Query: 539 LKSYCDCIKDGLKSTFVPEGTNAVTVVQSKPEASGSQAKITSKPENL--KIKVMTKSDPK 596
K C + + + A V+++K A + I +K + + K K K
Sbjct: 1268 KKRKC----EKAEKAAALKRQCAKLVIRAKEAALRKKCAIIAKKAKMAAEKKECEKLAKK 1323
Query: 597 SQK-------IKILKRSEPVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLND 649
+++ K+ K+ + +K K+ +K K K KG K K N+
Sbjct: 1324 AKEAIEWKKCAKLAKKKREAEKKKCAKLAKKEKEAAEKKKRCKDLAKNKKKGHKKKGRNE 1383
Query: 650 QK 651
+
Sbjct: 1384 NR 1385
Score = 39.7 bits (91), Expect = 0.067
Identities = 85/451 (18%), Positives = 163/451 (35%), Gaps = 31/451 (6%)
Query: 224 KVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLS 283
K E + E E +++ K L K K + K K ++++ +
Sbjct: 702 KCEEAAKKEKEAAERKKCEELAKKIKKAAEKKKCKKLAKKKKAGE--------------K 747
Query: 284 NKLEYLARKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSS 343
NKL+ +K KK L ++ + K+ CK+ + + +K + K +K
Sbjct: 748 NKLKKGNKKGKKALKEKKKCRELAKKKAAEKKKCKEAAKKEKEAAEKKKCEKTAKKRKEE 807
Query: 344 FNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAMGLVATVSSEAVSEAESDSED 403
K K KK A + ++ ++E + K + + E ++
Sbjct: 808 AEKKKCEKTAKKRKEAAEKKKCEKAAKKRKEEAEKKKCEKTAKKRKETAEKKKCEKAAKK 867
Query: 404 ENEVYSKIPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLELKASEEELK 463
+ K ++ KE E + KEK + K+ + + K E K
Sbjct: 868 RKQAAEKKKCEKAAKKRKEAA---EKKKCAEAAKKEKELAEKKKCEEAAKKEKEVAERKK 924
Query: 464 GFNLISTTYEDRLKSLCQKLQEKCDKGSGNKHEIALDDFIMAGIDRSKVASM-IYSTYKN 522
L + K C+KL +K +K +G K+++ AG + K + S
Sbjct: 925 CEELAKKIKKAAEKKKCKKLAKK-EKKAGEKNKLKK----KAGKGKKKCKKLGKKSKRAA 979
Query: 523 KGKGIGYSEEKSKEYSLKSYCDCIKDGLKSTFVPEGTNAVTVVQSKPEASGSQAKITSKP 582
+ K + +K KE + K C+ + K E + EA+ Q + +
Sbjct: 980 EKKKCAEAAKKEKEAATKKKCE--ERAKKQKEAAEKKQCEERAKKLKEAA-EQKQCEERA 1036
Query: 583 ENLKIKVMTKS-DPKSQKIKILKRSEPVHQNLIK----PESKIPKQKDQKNKAATASEKT 637
+ LK K + +++K+K + + K E K +++ +K K A ++
Sbjct: 1037 KKLKEAAEKKQCEERAKKLKEAAEQKQCEERAKKLKEAAEKKQCEERAKKEKEAAEKKQC 1096
Query: 638 IPKGVKPKVLNDQKPLSIHPKVCLRAREKQR 668
+ K K ++K K A EK+R
Sbjct: 1097 EERAKKLKEAAEKKQCEERAKKEKEAAEKKR 1127
>GOA4_HUMAN (Q13439) Golgi autoantigen, golgin subfamily A member 4
(Trans-Golgi p230) (256 kDa golgin) (Golgin-245) (72.1
protein)
Length = 2230
Score = 57.0 bits (136), Expect = 4e-07
Identities = 105/551 (19%), Positives = 215/551 (38%), Gaps = 62/551 (11%)
Query: 55 LDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIVASIPRTEYMKM 114
L+EEL +L+D D + + E +++ H Q K H++ SI RTE
Sbjct: 703 LEEEL-SVLKDQTDKMKQELEAKMDEQKNHHQQQVDSIIKEHEV------SIQRTEKALK 755
Query: 115 SDKSTAKAMFASLCANFEGSKNVKEAKALMLVHQYELFRMKDDESIEEMYSRFQTLVSGL 174
+ + + E K++KE HQ + ++ D I+ Q + L
Sbjct: 756 DQINQLELLLK------ERDKHLKE-------HQAHVENLEAD--IKRSEGELQQASAKL 800
Query: 175 QILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHE 234
+ + A+ +K ++ + K+ +E + L T V ++ + K L+ H+
Sbjct: 801 DVFQSYQSATHEQTKAYEEQLAQLQQKLLDLETERILLTKQVAEVEAQKKDVCTELDAHK 860
Query: 235 TSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQK 294
+ L + + E + DG+ +++Q+ ++ + + R+ +
Sbjct: 861 IQVQDLMQQLEKQNSEMEQKVKSLTQVYESKLEDGNKEQEQTKQILVEKENMILQMREGQ 920
Query: 295 KFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSKKSSFNSSKFRKQ-- 352
K + + K S KED N + F ++K K K K + + ++
Sbjct: 921 KKEIEILTQKLSAKEDSIHILNEEYETKFKNQEKKMEKVKQKAKEMQETLKKKLLDQEAK 980
Query: 353 IKKSLMATWEDLDSESGSDKEEADDDAKAAMGLVATVSSEAVSEAESDSEDENEVYSKIP 412
+KK L T +L + + + A+A + S+AVS E++ +++ E +++
Sbjct: 981 LKKELENTALELSQKEKQFNAKMLEMAQANSAGI----SDAVSRLETNQKEQIESLTEVH 1036
Query: 413 RQELVDSLKELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTY 472
R+EL D ++S++E + N+ + ++ ++ Q+K
Sbjct: 1037 RRELND----VISIWEKKLNQQAEELQEIHEIQLQEK----------------------- 1069
Query: 473 EDRLKSLCQK-LQEKCDKGSGNKHEIALDDFIMAGIDRSKVASMIYSTYKNKG---KGIG 528
E + L QK L C+K NK L + G+ + + + K K +
Sbjct: 1070 EQEVAELKQKILLFGCEKEEMNKEITWLKE---EGVKQDTTLNELQEQLKQKSAHVNSLA 1126
Query: 529 YSEEKSKEYSLKSYCDCIKDGLKSTFVPEGTNAVTVVQSKPEASGSQAKITSKPENLKIK 588
E K K + K D K ++TF+ E + ++ + + S+ K + + +
Sbjct: 1127 QDETKLKAHLEKLEVDLNKSLKENTFLQEQLVELKMLAEEDKRKVSELTSKLKTTDEEFQ 1186
Query: 589 VMTKSDPKSQK 599
+ S KS K
Sbjct: 1187 SLKSSHEKSNK 1197
Score = 53.9 bits (128), Expect = 3e-06
Identities = 78/364 (21%), Positives = 154/364 (41%), Gaps = 29/364 (7%)
Query: 138 KEAKALMLVHQYELFRMKDDES-IEEMYSRFQTLVSGLQILKKS----YVASDHVSKILR 192
+E L + Q ++++ E+ I+ M + ++LV+ + L+K A+ +
Sbjct: 1283 EEQNTLNISFQQATHQLEEKENQIKSMKADIESLVTEKEALQKEGGNQQQAASEKESCIT 1342
Query: 193 SLPSRWRPKVTAIEEAKD-LNTLSVEDLVSSLKVHEMSLN---EHETSKKSKSIALPSKG 248
L + A+ K+ L VE +SSL LN ++ S K A+ S
Sbjct: 1343 QLKKELSENINAVTLMKEELKEKKVE--ISSLSKQLTDLNVQLQNSISLSEKEAAISSLR 1400
Query: 249 KTSKSSKAYKASESEEESPDGDSDEDQSVK-MAMLSNKLEYLARKQKKFLSKRGSYKNSK 307
K K + ++ S D+ + + + + + + +KK S+ ++N+
Sbjct: 1401 KQYDEEKCELLDQVQDLSFKVDTLSKEKISALEQVDDWSNKFSEWKKKAQSRFTQHQNTV 1460
Query: 308 KEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSK-----KSSFNSSKFRKQIKKSLMATWE 362
KE Q K + + +L KE+ ++K K K + + K+S + T
Sbjct: 1461 KELQIQLELKSKEAYEKDEQINLLKEELDQQNKRFDCLKGEMEDDKSKMEKKESNLET-- 1518
Query: 363 DLDSESGSDKEEADDDAKAAMGLVATVSSEAVSEAESDSEDENEVYSKIPRQELVDSLKE 422
+L S++ E D + T+ E+++E + + ++ K ELV L+
Sbjct: 1519 ELKSQTARIMELEDHITQK------TIEIESLNEVLKNYNQQKDIEHK----ELVQKLQH 1568
Query: 423 LLSLFEHRTNELTDLKEKYVDLMKQQKSTLLELKASEEELKGFNLISTTYEDRLKSLCQK 482
L E + N + + +EK + L Q S EL+ ++EL+ NL + E+ LK+L +
Sbjct: 1569 FQELGEEKDNRVKEAEEKILTLENQVYSMKAELETKKKELEHVNLSVKSKEEELKALEDR 1628
Query: 483 LQEK 486
L+ +
Sbjct: 1629 LESE 1632
Score = 43.5 bits (101), Expect = 0.005
Identities = 82/352 (23%), Positives = 142/352 (40%), Gaps = 60/352 (17%)
Query: 351 KQIKKSLMATWEDLDSESGSDKEEADDDAKAAMGLVATVSSEAVSEAESDSEDENEVYSK 410
K ++ L A + L+SES + E A+ +A + + +S+ E ++ E Y K
Sbjct: 1616 KSKEEELKALEDRLESESAAKLAELKRKAEQK---IAAIKKQLLSQME----EKEEQYKK 1668
Query: 411 IPRQELVDSLKELLSLFEHRTNELTDLKEKYVDLMKQQKSTLLELKAS--------EEEL 462
L EL + + R E+ L+EK + Q TL+ +++ +EE
Sbjct: 1669 GTESHL----SELNTKLQEREREVHILEEKLKSVESSQSETLIVPRSAKNVAAYTEQEEA 1724
Query: 463 KGFNLISTTYEDRLKSLCQKLQEK---CDKGSGNKHEIALDDFIMAGIDRSKVASMIYST 519
+ TYE+++ L + L EK + K E F M + ++ + ++
Sbjct: 1725 DSQGCVQKTYEEKISVLQRNLTEKEKLLQRVGQEKEETVSSHFEMRCQYQERLIKLEHAE 1784
Query: 520 YK--NKGKGIGY----SEEKSKEYSLKSYCDCIKDGLKSTFVPEGTNAVTVVQSKPEASG 573
K IG+ EEK+K+YSL K+G G N + Q+
Sbjct: 1785 AKQHEDQSMIGHLQEELEEKNKKYSLIVAQHVEKEG--------GKNNIQAKQNLENVFD 1836
Query: 574 SQAKITSKPENLKIKVMTKSDPKSQKIK----ILKRSEPVH----QNLIKPESKIP--KQ 623
K T + + L +++ QKIK L R + VH + L K+ +Q
Sbjct: 1837 DVQK-TLQEKELTCQIL------EQKIKELDSCLVRQKEVHRVEMEELTSKYEKLQALQQ 1889
Query: 624 KDQKNKAA-----TASEKTIPKGVKPKVLNDQKPL--SIHPKVCLRAREKQR 668
D +NK EK+ V+PK+L++ + + K+ REKQ+
Sbjct: 1890 MDGRNKPTELLEENTEEKSKSHLVQPKLLSNMEAQHNDLEFKLAGAEREKQK 1941
Score = 38.9 bits (89), Expect = 0.11
Identities = 77/410 (18%), Positives = 161/410 (38%), Gaps = 54/410 (13%)
Query: 126 SLCANFEGSKNVKEAKALMLVHQYELFRMKDDESIEEMYSRFQTLVS------------- 172
+L E K + A+ +H E MK++E I ++ SR + + +
Sbjct: 353 NLIEQLEQDKGMVIAETKRQMH--ETLEMKEEE-IAQLRSRIKQMTTQGEELREQKEKSE 409
Query: 173 --GLQILKKSYVASDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSL 230
+ L+K+ + + R L + ++ IE+ + +S++ +S +K +
Sbjct: 410 RAAFEELEKALSTAQKTEEARRKLKAEMDEQIKTIEKTSEEERISLQQELSRVKQEVV-- 467
Query: 231 NEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLA 290
+ KKS + K + A K E ++ + + + +K+A+ ++ EYL
Sbjct: 468 ---DVMKKSSEEQIAKLQKLHEKELARKEQELTKKLQTREREFQEQMKVALEKSQSEYLK 524
Query: 291 RKQKKFLSKRGSYKNSKKEDQKGCFNCKKPGHFIADCPDLQKE---------KFKGKSKK 341
Q+K ++ S + E QK + DLQ+E + + +K
Sbjct: 525 ISQEK--EQQESLALEELELQKKAILTESENKL----RDLQQEAETYRTRILELESSLEK 578
Query: 342 SSFNSSKFRKQIKKSLMATWEDLDSESGSDKEEADDDAKAAMGLVATVSSEAVSEAESDS 401
S + K + L A + E E+ + ++ + +E + +
Sbjct: 579 SLQENKNQSKDLAVHLEAEKNKHNKEITVMVEKHKTELESLKHQQDALWTEKLQVLKQQY 638
Query: 402 EDENEVYSKIPRQELVDSLKELLSLFE-------HRTNELTDLKEKYVDLMKQQKSTLLE 454
+ E E + QE LK+ +F+ +T E D+K+ ++ + + S +L+
Sbjct: 639 QTEMEKLREKCEQEKETLLKDKEIIFQAHIEEMNEKTLEKLDVKQTELESLSSELSEVLK 698
Query: 455 LKAS-EEELKGFNLISTTYEDRLKSLCQKLQEKCDKGSGNKHEIALDDFI 503
+ EEEL + +D+ + Q+L+ K D+ N H+ +D I
Sbjct: 699 ARHKLEEEL-------SVLKDQTDKMKQELEAKMDE-QKNHHQQQVDSII 740
>POL_SFV1 (P23074) Pol polyprotein [Contains: Protease (EC
3.4.23.-); Reverse transcriptase/ribonuclease H (EC
2.7.7.49) (EC 3.1.26.4) (RT); Integrase (IN)]
Length = 1161
Score = 54.3 bits (129), Expect = 3e-06
Identities = 37/127 (29%), Positives = 63/127 (49%), Gaps = 8/127 (6%)
Query: 854 VSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFS-SFC 912
V +P + +ID GP+ ++ G + LV+VD + + W+ K+ + V + +
Sbjct: 878 VKPLKPFDKFYIDYIGPLPPSN--GYLHVLVVVDSMTGFVWLYPTKAPSTSATVKALNML 935
Query: 913 TQIQSEKELKILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNGVVERKNRTLQ 972
T I K L SD G F + F + ++ GI EFS+P PQ +G VERKN ++
Sbjct: 936 TSIAIPKVL-----HSDQGAAFTSSTFADWAKEKGIQLEFSTPYHPQSSGKVERKNSDIK 990
Query: 973 EMARTMI 979
+ ++
Sbjct: 991 RLLTKLL 997
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.314 0.131 0.371
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,076,447
Number of Sequences: 164201
Number of extensions: 8115954
Number of successful extensions: 28580
Number of sequences better than 10.0: 636
Number of HSP's better than 10.0 without gapping: 148
Number of HSP's successfully gapped in prelim test: 509
Number of HSP's that attempted gapping in prelim test: 25302
Number of HSP's gapped (non-prelim): 2766
length of query: 1591
length of database: 59,974,054
effective HSP length: 124
effective length of query: 1467
effective length of database: 39,613,130
effective search space: 58112461710
effective search space used: 58112461710
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 73 (32.7 bits)
Medicago: description of AC139344.2