BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137839.10 - phase: 0
(502 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia p... 52 3e-06
NOA1_CAEEL (Q9TYK1) Putative nucleolar protein family A member 1... 50 1e-05
LRP1_HHV1F (P17588) Latency-related protein 1 50 1e-05
FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein) 47 2e-04
FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein) 47 2e-04
RB56_HUMAN (Q92804) TATA-binding protein associated factor 2N (R... 46 3e-04
FBRL_SCHPO (P35551) Fibrillarin 46 3e-04
TRIO_HUMAN (O75962) Triple functional domain protein (PTPRF inte... 45 3e-04
MBD2_HUMAN (Q9UBB5) Methyl-CpG binding protein 2 (Methyl-CpG bin... 45 4e-04
ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0 (V... 44 7e-04
GR2B_ARATH (Q38896) Glycine-rich protein 2b (AtGRP2b) 44 7e-04
EBN1_EBV (P03211) EBNA-1 nuclear protein 44 7e-04
MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL) 44 0.001
GDF7_MOUSE (P43029) Growth/differentiation factor 7 precursor (G... 44 0.001
FBRL_DROER (Q8I1F4) Fibrillarin 44 0.001
WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp) 44 0.001
FBRL_DROME (Q9W1V3) Fibrillarin 44 0.001
MBD2_MOUSE (Q9Z2E1) Methyl-CpG binding protein 2 (Methyl-CpG bin... 43 0.002
IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2 43 0.002
CSS1_PIG (P04574) Calpain small subunit 1 (CSS1) (Calcium-depend... 43 0.002
>MLL4_HUMAN (Q9UMN6) Myeloid/lymphoid or mixed-lineage leukemia
protein 4 (Trithorax homolog 2)
Length = 2715
Score = 52.4 bits (124), Expect = 3e-06
Identities = 82/306 (26%), Positives = 103/306 (32%), Gaps = 77/306 (25%)
Query: 32 GGGGGDGRGG-GRGRGGSGTVTFNFGEKAAPGNPNPTPN------------VNESKPDAT 78
G GGG GRGG G G G PG P + + +
Sbjct: 26 GAGGGGGRGGRGNGAERVRVALRRGGGATGPGGAEPGEDTALLRLLGLRRGLRRLRRLWA 85
Query: 79 DSPIPPGAGRGHGRG-----GTVPD------------FPSFSF------SSFMSSI--QQ 113
+ G GRG GRG G VP+ F F SS S++ Q+
Sbjct: 86 GPRVQRGRGRGRGRGWGPSRGCVPEEESSDGESDEEEFQGFHSDEDVAPSSLRSALRSQR 145
Query: 114 PGTGRGRGRGRGFDPLPPQFENDSVPKKPVFIKREDNVSQTDANDFSPPKNPVFTRSED- 172
RGRGR PLPP D P +PPK P R E+
Sbjct: 146 GRAPRGRGRKHKTTPLPPPRLADVAP--------------------TPPKTPARKRGEEG 185
Query: 173 ----VRPVEPIDLSGDSESDNRFVMTVPKVLPGGGRGR--GKPLEEAAQEAPQAPVVNRH 226
V+ + + + R P P RGR G+P ++ Q VV
Sbjct: 186 TERMVQALTELLRRAQAPQAPRSRACEPST-PRRSRGRPPGRPAGPCRRK--QQAVVVAE 242
Query: 227 IRVRQTPADAESDNVPRRQPMNRFVRDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGR 286
V + VP + + +G G G G R RG G RGGRGGR
Sbjct: 243 AAVTIPKPEPPPPVVPVKHQTGSWKCKEGPGPGPGTPR--------RG-GQSSRGGRGGR 293
Query: 287 GDGRGG 292
G GRGG
Sbjct: 294 GRGRGG 299
Score = 35.4 bits (80), Expect = 0.35
Identities = 20/35 (57%), Positives = 21/35 (59%), Gaps = 1/35 (2%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDG 289
G GS G G RGR R RG G GGRGGRG+G
Sbjct: 6 GGGSCPGPGSARGR-FPGRPRGAGGGGGRGGRGNG 39
>NOA1_CAEEL (Q9TYK1) Putative nucleolar protein family A member 1
(snoRNP protein GAR1) (H/ACA ribonucleoprotein GAR1)
Length = 244
Score = 50.4 bits (119), Expect = 1e-05
Identities = 79/284 (27%), Positives = 106/284 (36%), Gaps = 99/284 (34%)
Query: 32 GGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRGHG 91
G GGG G GGRG GG G G + G G G G
Sbjct: 6 GRGGGGGFRGGRGGGGGG------GFRGGRGGDR-------------------GGGFRGG 40
Query: 92 RGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRGFDPLPPQFENDSVPKKPVFIKR-EDN 150
RGG G GRG G+D PP+ V VF + +D+
Sbjct: 41 RGGF----------------------GGGGRG-GYDQGPPE----EVVLVGVFSHQCQDD 73
Query: 151 VSQTDANDFSPPKN-PVFTRSEDVRPVEPIDLSGDSESDNRFVMTVPKVLPGGGRGRGKP 209
+ + + P N P++ ++++ V ID S +N F +T
Sbjct: 74 IVCNNTSGKIPYFNAPIYFKNKE--QVGKIDEIFGSPGENGFSVT--------------- 116
Query: 210 LEEAAQEAPQAPVVNRHIRVRQTPADAESDNVPRRQPMNRFVRDDGDGSGRGRGRGRGRD 269
L + + + P +I + + P++RF+ G G GRG GRGRG D
Sbjct: 117 LSQGVKASSFEPESQLYI------------DPGKLLPVDRFLPQAGGGRGRG-GRGRGGD 163
Query: 270 VYARG-----RGDRGRGG--------RGGRGDGRGGFKRYGDDR 300
RG RG GRGG RGG G GRGGF+ G DR
Sbjct: 164 RGGRGSDRGGRGGFGRGGGGGFRGGDRGGFGGGRGGFR--GGDR 205
Score = 37.4 bits (85), Expect = 0.091
Identities = 24/55 (43%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 252 RDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYGDDRTSHQDI 306
R G G GRG G G GDRG G RGGRG G GG R G D+ +++
Sbjct: 7 RGGGGGFRGGRGGGGGGGFRGGRGGDRGGGFRGGRG-GFGGGGRGGYDQGPPEEV 60
Score = 30.8 bits (68), Expect = 8.6
Identities = 16/30 (53%), Positives = 18/30 (59%), Gaps = 1/30 (3%)
Query: 30 GFGGGGGDG-RGGGRGRGGSGTVTFNFGEK 58
GFG GGG G RGG RG G G F G++
Sbjct: 176 GFGRGGGGGFRGGDRGGFGGGRGGFRGGDR 205
>LRP1_HHV1F (P17588) Latency-related protein 1
Length = 340
Score = 50.1 bits (118), Expect = 1e-05
Identities = 25/41 (60%), Positives = 26/41 (62%)
Query: 252 RDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
R G G GRG G GRG +RGRG RGRGGRGG GR G
Sbjct: 288 RGGGSGGGRGPGGGRGGPRGSRGRGGRGRGGRGGGRRGRQG 328
Score = 35.8 bits (81), Expect = 0.27
Identities = 20/42 (47%), Positives = 21/42 (49%), Gaps = 3/42 (7%)
Query: 29 SGFGGGGGDGRG---GGRGRGGSGTVTFNFGEKAAPGNPNPT 67
SG G G G GRG G RGRGG G G + G P PT
Sbjct: 292 SGGGRGPGGGRGGPRGSRGRGGRGRGGRGGGRRGRQGGPGPT 333
>FUS_MOUSE (P56959) RNA-binding protein FUS (Pigpen protein)
Length = 518
Score = 46.6 bits (109), Expect = 2e-04
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 256 DGSGRGRGRGRGRDVYARGRGDRGR-GGRGGR----GDGRGGFKRYGD--DRTSHQDIAR 308
D GRGRG G G + + G RGR GGRGGR G RGGF ++G D+ S D +
Sbjct: 213 DRGGRGRGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDSEQ 272
Query: 309 SNADGLYV-----GDNADGEKLA 326
N+D + G+N E +A
Sbjct: 273 DNSDNNTIFVQGLGENVTIESVA 295
Score = 45.4 bits (106), Expect = 3e-04
Identities = 76/276 (27%), Positives = 105/276 (37%), Gaps = 68/276 (24%)
Query: 32 GGGGGDGRG----GGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAG 87
GGGGG G G GGRGRGG G G + G P G G
Sbjct: 202 GGGGGYGGGQQDRGGRGRGGGG------GYNRSSGGYEPRGR---------------GGG 240
Query: 88 RGHGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRGFDPLPPQFENDSVPKKPVFIKR 147
RG GRGG + F+ F G R +G D E D+ +F++
Sbjct: 241 RG-GRGG-MGGSDRGGFNKF---------GGPRDQGSRHDS-----EQDNSDNNTIFVQG 284
Query: 148 -EDNVSQTDANDFSPPKNPVFTRSEDVRPVEPIDLSGDSESDNRFVMTVPKVLPGGGRGR 206
+NV+ D+ + T + +P+ I+L D E+ G+ +
Sbjct: 285 LGENVTIESVADYFKQIGIIKTNKKTGQPM--INLYTDRET---------------GKLK 327
Query: 207 GKPLEEAAQEAPQAPVVNRHIRVRQTPADAESDNVPRRQPMNRFVRDDGDG-SGRGRGRG 265
G+ + + P A ++ + + R+ F R G+G GRGRG
Sbjct: 328 GEATV-SFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRA--DFNRGGGNGRGGRGRGGP 384
Query: 266 RGRDVYARGRGDRGRGGRGG---RGDGRGGFKRYGD 298
GR Y G G G GGRGG G G GG +R GD
Sbjct: 385 MGRGGY--GGGGSGGGGRGGFPSGGGGGGGQQRAGD 418
Score = 38.5 bits (88), Expect = 0.041
Identities = 28/69 (40%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 237 ESDNVPRRQPMNRFVRDDGDGSGRGRGRGRGRDVYA---RGRGDRGRGGRGGRGDGRGGF 293
E+ N R N+ DG G G G Y RGRG RGG GRG RGGF
Sbjct: 427 ENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGRGGYDRGGYRGRGGDRGGF 486
Query: 294 K--RYGDDR 300
+ R G DR
Sbjct: 487 RGGRGGGDR 495
Score = 36.2 bits (82), Expect = 0.20
Identities = 74/319 (23%), Positives = 99/319 (30%), Gaps = 68/319 (21%)
Query: 20 QTLVPFSTSSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATD 79
Q P STS +GG G GG G + G++ + G + N +
Sbjct: 103 QQPAPSSTSGSYGGSSQSSSYGQPQSGGYGQQSGYGGQQQSYGQQQSSYNPPQGYGQQNQ 162
Query: 80 SPIPPGAGRGHGRGGTVPDFPSFSFSSFMSSI----------------QQPGTGRGRGRG 123
G G G G G D S S QQ GRGRG G
Sbjct: 163 YNSSSGGGGGGGGGNYGQDQSSMSGGGGGGGYGNQDQSGGGGGGYGGGQQDRGGRGRGGG 222
Query: 124 RGFDPLPPQFENDSVPKKPVFIKREDNVSQTDANDFSPPKNPVFTRSEDVRPVEPIDLSG 183
G++ +E + + +D F+ P R + R
Sbjct: 223 GGYNRSSGGYEPRG---RGGGRGGRGGMGGSDRGGFNKFGGP---RDQGSR--------H 268
Query: 184 DSESDNRFVMTVPKVLPGGGRGRGKPLEEAAQEAPQAPVVNRHIRVRQTPADAESDNVPR 243
DSE DN T+ G G +E A Q ++ + + Q + +D
Sbjct: 269 DSEQDNSDNNTIFV----QGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETG 324
Query: 244 R-----------QPMNRFVRDDGDGS------------------GRGRGRGRGRDVYARG 274
+ P + D DG RG G GRG RG
Sbjct: 325 KLKGEATVSFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRG----GRG 380
Query: 275 R-GDRGRGGRGGRGDGRGG 292
R G GRGG GG G G GG
Sbjct: 381 RGGPMGRGGYGGGGSGGGG 399
Score = 34.3 bits (77), Expect = 0.77
Identities = 44/137 (32%), Positives = 53/137 (38%), Gaps = 36/137 (26%)
Query: 14 ISNATRQTLVPFSTSSGFGGGGGDGRG--------GGRGRGGSGTVTFNFGEKAAPGN-- 63
+S ATR+ F+ G G GG GRG GG G GG G F G G
Sbjct: 359 VSFATRRA--DFNRGGG-NGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQR 415
Query: 64 ------PNPT-PNVN---ESKPDATDSPIPPGAGRGHG---RGGTVPDFPSFSFSSFMSS 110
PNPT N+N ++ + +P P G G G G GG D
Sbjct: 416 AGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGD----------DR 465
Query: 111 IQQPGTGRGRGRGRGFD 127
+ G RG RGRG D
Sbjct: 466 RGRGGYDRGGYRGRGGD 482
>FUS_BOVIN (Q28009) RNA-binding protein FUS (Pigpen protein)
Length = 512
Score = 46.6 bits (109), Expect = 2e-04
Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 12/83 (14%)
Query: 256 DGSGRGRGRGRGRDVYARGRGDRGR-GGRGGR----GDGRGGFKRYGD--DRTSHQDIAR 308
D GRGRG G G + + G RGR GGRGGR G RGGF ++G D+ S D +
Sbjct: 206 DRGGRGRGGGGGYNRSSGGYEPRGRGGGRGGRGGMGGSDRGGFNKFGGPRDQGSRHDSEQ 265
Query: 309 SNADGLYV-----GDNADGEKLA 326
N+D + G+N E +A
Sbjct: 266 DNSDNNTIFVQGLGENVTIESVA 288
Score = 43.9 bits (102), Expect = 0.001
Identities = 75/276 (27%), Positives = 105/276 (37%), Gaps = 66/276 (23%)
Query: 28 SSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAG 87
S G+GGG D GGRGRGG G G + G P G G
Sbjct: 197 SGGYGGGQQDR--GGRGRGGGG------GYNRSSGGYEPRGR---------------GGG 233
Query: 88 RGHGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRGFDPLPPQFENDSVPKKPVFIKR 147
RG GRGG + F+ F G R +G D E D+ +F++
Sbjct: 234 RG-GRGG-MGGSDRGGFNKF---------GGPRDQGSRHDS-----EQDNSDNNTIFVQG 277
Query: 148 -EDNVSQTDANDFSPPKNPVFTRSEDVRPVEPIDLSGDSESDNRFVMTVPKVLPGGGRGR 206
+NV+ D+ + T + +P+ I+L D E+ G+ +
Sbjct: 278 LGENVTIESVADYFKQIGIIKTNKKTGQPM--INLYTDRET---------------GKLK 320
Query: 207 GKPLEEAAQEAPQAPVVNRHIRVRQTPADAESDNVPRRQPMNRFVRDDGDG-SGRGRGRG 265
G+ + + P A ++ + + R+ F R G+G GRGRG
Sbjct: 321 GEATV-SFDDPPSAKAAIDWFDGKEFSGNPIKVSFATRRA--DFNRGGGNGRGGRGRGGP 377
Query: 266 RGRDVYARGRGDRGRGGRGG---RGDGRGGFKRYGD 298
GR Y G G G GGRGG G G GG +R GD
Sbjct: 378 MGRGGY--GGGGSGGGGRGGFPSGGGGGGGQQRAGD 411
Score = 36.6 bits (83), Expect = 0.16
Identities = 24/53 (45%), Positives = 26/53 (48%), Gaps = 4/53 (7%)
Query: 252 RDDGDGSGRGRGRGRGR--DVYARGRGDRGRGGRGGRGDGRGGFK--RYGDDR 300
+ DG G G G G D GRG RGG GRG RGGF+ R G DR
Sbjct: 437 KPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRGGYRGRGGDRGGFRGGRGGGDR 489
Score = 36.6 bits (83), Expect = 0.16
Identities = 75/309 (24%), Positives = 101/309 (32%), Gaps = 75/309 (24%)
Query: 26 STSSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPG 85
S SSG+G G G G G GG ++G++ + P ++ G
Sbjct: 117 SQSSGYGQPQGGGYGQQSGYGGQQQ---SYGQQQSYNPPQGYGQQSQYNSS--------G 165
Query: 86 AGRGHGRGGTVPDFPSFSF------------SSFMSSIQQPGTGRGRGRGRGFDPLPPQF 133
G G G G D PS S S QQ GRGRG G G++ +
Sbjct: 166 GGGGGGGGSYGQDQPSMSSGGGGGGYGNQDQSGGYGGGQQDRGGRGRGGGGGYNRSSGGY 225
Query: 134 ENDSVPKKPVFIKREDNVSQTDANDFSPPKNPVFTRSEDVRPVEPIDLSGDSESDNRFVM 193
E + + +D F+ P R + R DSE DN
Sbjct: 226 EPRG---RGGGRGGRGGMGGSDRGGFNKFGGP---RDQGSR--------HDSEQDNSDNN 271
Query: 194 TVPKVLPGGGRGRGKPLEEAAQEAPQAPVVNRHIRVRQTPADAESDNVPRR--------- 244
T+ G G +E A Q ++ + + Q + +D +
Sbjct: 272 TIFV----QGLGENVTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSF 327
Query: 245 --QPMNRFVRDDGDGS------------------GRGRGRGRGRDVYARGR-GDRGRGGR 283
P + D DG RG G GRG RGR G GRGG
Sbjct: 328 DDPPSAKAAIDWFDGKEFSGNPIKVSFATRRADFNRGGGNGRG----GRGRGGPMGRGGY 383
Query: 284 GGRGDGRGG 292
GG G G GG
Sbjct: 384 GGGGSGGGG 392
Score = 35.0 bits (79), Expect = 0.45
Identities = 34/90 (37%), Positives = 37/90 (40%), Gaps = 19/90 (21%)
Query: 237 ESDNVPRRQPMNRFVRDDGDGSGRGRG-----------RGRGRDVYARGRGDRGRGG-RG 284
E+ N R N+ DG G G G R GR Y RG G RGRGG RG
Sbjct: 420 ENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGYDRG-GYRGRGGDRG 478
Query: 285 GRGDGRGGFKRYG------DDRTSHQDIAR 308
G GRGG R G D R H+ R
Sbjct: 479 GFRGGRGGGDRGGFGPGKMDSRGEHRQDRR 508
Score = 33.5 bits (75), Expect = 1.3
Identities = 43/135 (31%), Positives = 52/135 (37%), Gaps = 31/135 (22%)
Query: 14 ISNATRQTLVPFSTSSGFGGGGGDGRG--------GGRGRGGSGTVTFNFGEKAAPGN-- 63
+S ATR+ F+ G G GG GRG GG G GG G F G G
Sbjct: 352 VSFATRRA--DFNRGGG-NGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGGGGGGQQR 408
Query: 64 ------PNPT-PNVN---ESKPDATDSPIPPGAGRGHG---RGGTVPDFPSFSFSSFMSS 110
PNPT N+N ++ + +P P G G G G GG D +
Sbjct: 409 AGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMGGNYGDDRRGGRGGY--- 465
Query: 111 IQQPGTGRGRGRGRG 125
G RGRG RG
Sbjct: 466 --DRGGYRGRGGDRG 478
>RB56_HUMAN (Q92804) TATA-binding protein associated factor 2N
(RNA-binding protein 56) (TAFII68) (TAF(II)68)
Length = 592
Score = 45.8 bits (107), Expect = 3e-04
Identities = 42/123 (34%), Positives = 52/123 (42%), Gaps = 14/123 (11%)
Query: 201 GGGRGRGKPLEEAAQEAPQAPVVNRHIRVRQTPADAESDNVPRRQPMNRFVRDDGDGSGR 260
GG +GRG + P N + R + N PR + D G
Sbjct: 344 GGFQGRGGDPKSGDWVCPNPSCGNMNFARRNS---CNQCNEPRPE-------DSRPSGGD 393
Query: 261 GRGRGRGRDVYARGRGDRGRGG-RGGRGDGRGGFKRYGDDRTSHQDIARSNADGLYVGDN 319
RGRG G + RGRG GRGG RGG G R G YG DR+S + + G Y GD
Sbjct: 394 FRGRGYGGERGYRGRG--GRGGDRGGYGGDRSG-GGYGGDRSSGGGYSGDRSGGGYGGDR 450
Query: 320 ADG 322
+ G
Sbjct: 451 SGG 453
Score = 41.6 bits (96), Expect = 0.005
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 15/105 (14%)
Query: 244 RQPMNRFVRDDGDGSGRGRGRGRGRDVYAR-GRGDRGRGGRGGRGDGRGGFKRYGDDRTS 302
R+ ++R+ +D G G +G GRGR Y + GRG G G RGGFK +G
Sbjct: 164 RRDVSRY-GEDNRGYGGSQGGGRGRGGYDKDGRGPM----TGSSGGDRGGFKNFG----G 214
Query: 303 HQDIA-RSNADGLYVGDNADGEKL-AKKLGPEI-MDQITEAYEEI 344
H+D R++AD DN+D + + LG + DQ+ E +++I
Sbjct: 215 HRDYGPRTDADS--ESDNSDNNTIFVQGLGEGVSTDQVGEFFKQI 257
Score = 39.3 bits (90), Expect = 0.024
Identities = 34/83 (40%), Positives = 35/83 (41%), Gaps = 17/83 (20%)
Query: 255 GDGSGRGRGRGRGRDVYARGRG----DRG-----RGG------RGGRGDGRGGFKRYGDD 299
G G RG G G R Y RG DRG RGG RGG G RGG YG D
Sbjct: 485 GYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGYGGDRSRGGYGGDRGGGSGYGGD 544
Query: 300 RTSHQDIARSNADGLYVGDNADG 322
R+ RS G Y GD G
Sbjct: 545 RSGGYGGDRSG--GGYGGDRGGG 565
Score = 38.9 bits (89), Expect = 0.031
Identities = 28/75 (37%), Positives = 31/75 (41%), Gaps = 7/75 (9%)
Query: 252 RDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGF----KRYGDDRTSHQDIA 307
R G G RG G G R Y RG G RGG G RGG+ YG DR +
Sbjct: 467 RGGGYGGDRGGGYGGDRGGYGGDRGGGYGGDRGGYGGDRGGYGGDRGGYGGDRGGY---G 523
Query: 308 RSNADGLYVGDNADG 322
+ G Y GD G
Sbjct: 524 GDRSRGGYGGDRGGG 538
Score = 34.7 bits (78), Expect = 0.59
Identities = 24/52 (46%), Positives = 25/52 (47%), Gaps = 6/52 (11%)
Query: 255 GDGSGRGRGRGRGRDVYARGRG-----DRGRGGRGGRGDGRGGFK-RYGDDR 300
GD SG G G R Y RG DRG G G RG G GG + YG DR
Sbjct: 439 GDRSGGGYGGDRSGGGYGGDRGGGYGGDRGGGYGGDRGGGYGGDRGGYGGDR 490
Score = 33.5 bits (75), Expect = 1.3
Identities = 20/39 (51%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGG-RGDGRGG 292
G G RG G G G D GDR GG GG RG G GG
Sbjct: 530 GYGGDRGGGSGYGGDRSGGYGGDRSGGGYGGDRGGGYGG 568
Score = 33.1 bits (74), Expect = 1.7
Identities = 34/96 (35%), Positives = 41/96 (42%), Gaps = 24/96 (25%)
Query: 14 ISNATRQTLVPFSTSSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGN-----PNPT- 67
+S ATR+ P G GGG GRGG RGRGG G P + PNP+
Sbjct: 315 VSFATRR---PEFMRGGGSGGGRRGRGGYRGRGGFQ------GRGGDPKSGDWVCPNPSC 365
Query: 68 PNVNESK---------PDATDSPIPPGAGRGHGRGG 94
N+N ++ P DS G RG G GG
Sbjct: 366 GNMNFARRNSCNQCNEPRPEDSRPSGGDFRGRGYGG 401
Score = 30.8 bits (68), Expect = 8.6
Identities = 20/41 (48%), Positives = 21/41 (50%), Gaps = 11/41 (26%)
Query: 260 RGRGRGRGRDVYARGRGDRGRGGRGGRG--DGRGGFKRYGD 298
RG G G GR RGRGG GRG GRGG + GD
Sbjct: 326 RGGGSGGGR---------RGRGGYRGRGGFQGRGGDPKSGD 357
>FBRL_SCHPO (P35551) Fibrillarin
Length = 305
Score = 45.8 bits (107), Expect = 3e-04
Identities = 25/42 (59%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRG--RGGRGGRGDGRGGFK 294
G G GRG RG GR GRG RG RGGRGG GRGG K
Sbjct: 27 GFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Score = 34.7 bits (78), Expect = 0.59
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 6/44 (13%)
Query: 255 GDGSGRGRGRGR------GRDVYARGRGDRGRGGRGGRGDGRGG 292
G GRG RG GR + GRG GGRGG GRGG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG 49
Score = 33.9 bits (76), Expect = 1.0
Identities = 16/22 (72%), Positives = 16/22 (72%), Gaps = 2/22 (9%)
Query: 30 GFGGGGGDGRGGGRG--RGGSG 49
GFGGG G RGGGRG RGG G
Sbjct: 27 GFGGGRGGARGGGRGGARGGRG 48
Score = 32.0 bits (71), Expect = 3.8
Identities = 21/41 (51%), Positives = 22/41 (53%), Gaps = 7/41 (17%)
Query: 257 GSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYG 297
GS GRG RG GRG GGRGG G GRGG + G
Sbjct: 6 GSRGGRGGSRG------GRGGFN-GGRGGFGGGRGGARGGG 39
>TRIO_HUMAN (O75962) Triple functional domain protein (PTPRF
interacting protein)
Length = 3038
Score = 45.4 bits (106), Expect = 3e-04
Identities = 20/55 (36%), Positives = 26/55 (46%)
Query: 28 SSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPI 82
S G GGGG G GGG G GG G + G P + P+ + S+P P+
Sbjct: 2232 SGGGGGGGSGGSGGGGGSGGGGAPSGGSGHSGGPSSCGGAPSTSRSRPSRIPQPV 2286
>MBD2_HUMAN (Q9UBB5) Methyl-CpG binding protein 2 (Methyl-CpG
binding domain protein 2) (Demethylase) (DMTase)
Length = 411
Score = 45.1 bits (105), Expect = 4e-04
Identities = 27/50 (54%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Query: 246 PMNRFVRDDGDGSGRGRGR----GRGRDVYARGRGDRGRGGRGGRGDGRG 291
P++ R+ G GRGRGR GRG V RGRG RGRG GRG GRG
Sbjct: 45 PVSGVRREGARGGGRGRGRWKQAGRGGGVCGRGRG-RGRGRGRGRGRGRG 93
Score = 43.9 bits (102), Expect = 0.001
Identities = 24/41 (58%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 252 RDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
R G G GRGRGRGRGR RGR G G GG G G GG
Sbjct: 76 RGRGRGRGRGRGRGRGR---GRGRPPSGGSGLGGDGGGCGG 113
Score = 33.9 bits (76), Expect = 1.0
Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 6/65 (9%)
Query: 24 PFSTSSGFGGGGGDGRGGGRGRGGS---GTVTFNFGEKAAPGNPNPTPNVNESKPDATDS 80
P S SG GG GG GGG G GG+ V F G A PG P + + D
Sbjct: 97 PPSGGSGLGGDGGGCGGGGSGGGGAPRREPVPFPSG-SAGPGPRGPRATESGKRMDC--P 153
Query: 81 PIPPG 85
+PPG
Sbjct: 154 ALPPG 158
Score = 32.7 bits (73), Expect = 2.3
Identities = 30/97 (30%), Positives = 37/97 (37%), Gaps = 19/97 (19%)
Query: 36 GDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRGH----G 91
G+ GG G GG + G + + P+P V + G GRG G
Sbjct: 17 GESAAGGSGAGGDSAI--EQGGQGSALAPSPVSGVRR------EGARGGGRGRGRWKQAG 68
Query: 92 RGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRGFDP 128
RGG V + G GRGRGRGRG P
Sbjct: 69 RGGGV-------CGRGRGRGRGRGRGRGRGRGRGRPP 98
>ICP0_HHV2H (P28284) Trans-acting transcriptional protein ICP0
(VMW118 protein)
Length = 825
Score = 44.3 bits (103), Expect = 7e-04
Identities = 67/270 (24%), Positives = 88/270 (31%), Gaps = 53/270 (19%)
Query: 39 RGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRGHGRGGTVPD 98
R RG GG+G + P P P + +P+ G G G G G
Sbjct: 261 RAPRRGGGGAGATR----GTSQPAATRPAPPGAPRSSSSGGAPLRAGVGSGSGGG----- 311
Query: 99 FPSFSFSSFMSSIQQPGTGRGRGRGRGFDPLPPQFENDSVPKKPVFIKREDNVSQTDAND 158
P+ + + P G GR + R E + P + +E + +D
Sbjct: 312 -PAVAAVVPRVASLPPAAGGGRAQARRVGEDAAAAEGRTPPARQPRAAQEPPIVISD--- 367
Query: 159 FSPPKNPVFTRSEDVRPVEPIDLSGDSESDNRFVMTVPKVLPGGGRGRGKPLEEAAQEAP 218
SPP +P RP P LS FV + + G G G P P
Sbjct: 368 -SPPPSP-------RRPAGPGPLS--------FVSSSSAQVSSGPGGGGLPQSSGRAARP 411
Query: 219 QAPVVNRHIRVRQTP-----------ADAESDNVP------RRQPMNRFVRDDGDGSGRG 261
+A V RVR P ADA P R P +R + D +
Sbjct: 412 RAAVAP---RVRSPPRAAAAPVVSASADAAGPAPPAVPVDAHRAPRSRMTQAQTDTQAQS 468
Query: 262 RGRGRGRDVYARGRGDRGRGGRGGRGDGRG 291
GR D RG G G GG G RG
Sbjct: 469 LGRAGATD----ARGSGGPGAEGGPGVPRG 494
>GR2B_ARATH (Q38896) Glycine-rich protein 2b (AtGRP2b)
Length = 201
Score = 44.3 bits (103), Expect = 7e-04
Identities = 22/40 (55%), Positives = 22/40 (55%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFK 294
G G G GRG GRG Y G G RG GGRGG G FK
Sbjct: 101 GFGGGGGRGGGRGGGSYGGGYGGRGSGGRGGGGGDNSCFK 140
Score = 34.7 bits (78), Expect = 0.59
Identities = 16/29 (55%), Positives = 18/29 (61%)
Query: 29 SGFGGGGGDGRGGGRGRGGSGTVTFNFGE 57
SG GGGG G GGG G GG G ++ GE
Sbjct: 159 SGGGGGGRYGSGGGGGGGGGGLSCYSCGE 187
Score = 34.3 bits (77), Expect = 0.77
Identities = 23/65 (35%), Positives = 25/65 (38%)
Query: 30 GFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRG 89
GFGGGGG G G G G G G G + G N E A + G G
Sbjct: 101 GFGGGGGRGGGRGGGSYGGGYGGRGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSG 160
Query: 90 HGRGG 94
G GG
Sbjct: 161 GGGGG 165
Score = 31.6 bits (70), Expect = 5.0
Identities = 23/58 (39%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 235 DAESDNVPRRQPMNRFVRDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
D E DN R + + D G G G + GRG G GG GGRG GRGG
Sbjct: 64 DVEVDNSGRPKAIEVSGPDGAPVQGNSGGGGS-----SGGRG--GFGGGGGRGGGRGG 114
>EBN1_EBV (P03211) EBNA-1 nuclear protein
Length = 641
Score = 44.3 bits (103), Expect = 7e-04
Identities = 32/89 (35%), Positives = 35/89 (38%), Gaps = 2/89 (2%)
Query: 30 GFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRG 89
G G GG GGGRGRGGSG G G + A GRG
Sbjct: 316 GAGAGGAGAGGGGRGRGGSG--GRGRGGSGGRGRGGSGGRRGRGRERARGGSRERARGRG 373
Query: 90 HGRGGTVPDFPSFSFSSFMSSIQQPGTGR 118
GRG P PS SS S ++P GR
Sbjct: 374 RGRGEKRPRSPSSQSSSSGSPPRRPPPGR 402
Score = 40.8 bits (94), Expect = 0.008
Identities = 28/59 (47%), Positives = 32/59 (53%), Gaps = 8/59 (13%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYGDDRTSHQDIARSNADG 313
G G+G G GRGRG G G RGRGG GGRG G G +R G R + +R A G
Sbjct: 321 GAGAGGG-GRGRG------GSGGRGRGGSGGRGRGGSGGRR-GRGRERARGGSRERARG 371
Score = 40.4 bits (93), Expect = 0.011
Identities = 34/114 (29%), Positives = 41/114 (35%), Gaps = 18/114 (15%)
Query: 29 SGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGR 88
+G GG GG G GGG G GG+G G + G S G GR
Sbjct: 303 AGAGGAGGAGAGGGAGAGGAGAGGGGRGRGGSGGRGRG----GSGGRGRGGSGGRRGRGR 358
Query: 89 GHGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRGFDPLPPQFENDSVPKKP 142
RGG S + G GRGRG R P + S P++P
Sbjct: 359 ERARGG--------------SRERARGRGRGRGEKRPRSPSSQSSSSGSPPRRP 398
Score = 39.3 bits (90), Expect = 0.024
Identities = 20/43 (46%), Positives = 21/43 (48%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYG 297
G G G G G G G G RGRGG GGRG G G + G
Sbjct: 306 GGAGGAGAGGGAGAGGAGAGGGGRGRGGSGGRGRGGSGGRGRG 348
Score = 36.2 bits (82), Expect = 0.20
Identities = 23/45 (51%), Positives = 24/45 (53%), Gaps = 5/45 (11%)
Query: 252 RDDGDGSGRGRG----RGRGRDVYARGRG-DRGRGGRGGRGDGRG 291
R G GRGRG RGRG RGRG +R RGG R GRG
Sbjct: 329 RGRGGSGGRGRGGSGGRGRGGSGGRRGRGRERARGGSRERARGRG 373
Score = 35.4 bits (80), Expect = 0.35
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 11/47 (23%)
Query: 252 RDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYGD 298
R GD GRGRGRGRGR GGR G G G R+ D
Sbjct: 33 RRGGDNHGRGRGRGRGRG-----------GGRPGAPGGSGSGPRHRD 68
Score = 34.3 bits (77), Expect = 0.77
Identities = 20/44 (45%), Positives = 23/44 (51%), Gaps = 5/44 (11%)
Query: 252 RDDGDGSGRGRG-----RGRGRDVYARGRGDRGRGGRGGRGDGR 290
R G GRGRG RGRGR+ G +R RG GRG+ R
Sbjct: 337 RGRGGSGGRGRGGSGGRRGRGRERARGGSRERARGRGRGRGEKR 380
Score = 34.3 bits (77), Expect = 0.77
Identities = 65/265 (24%), Positives = 85/265 (31%), Gaps = 53/265 (20%)
Query: 29 SGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGR 88
+G GG GG G GGG G G+G G A G + GAG
Sbjct: 261 AGAGGAGGAGAGGGAGGAGAGGGAGGAGAGGAGG-----AGAGGAGGAGAGGAGGAGAGG 315
Query: 89 GHGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRGFDPLPPQFENDSVPKKPVFIKRE 148
G G GG + G GRG GRG + S ++ +R
Sbjct: 316 GAGAGG--------------AGAGGGGRGRGGSGGRGRGGSGGRGRGGSGGRRGRGRERA 361
Query: 149 DNVSQTDANDFSPPKNPVFTRSEDVRPVEPIDLSGDSESDNRFVMTVPKVLPGGGRGRGK 208
S+ A + + RP P S S S P+ P G R
Sbjct: 362 RGGSRERARGRGRGRG-------EKRPRSPSSQSSSSGSP-------PRRPPPGRRPFFH 407
Query: 209 PLEEAAQEAPQAPVVNRHIRVRQTPADAESDNVPRRQPMNRFVRDDGDGSGRG-RGRGRG 267
P+ EA + Q +VP D G+G G RG+G G
Sbjct: 408 PVGEA-----------DYFEYHQEGGPDGEPDVPPGAIEQGPADDPGEGPSTGPRGQGDG 456
Query: 268 RDVYARGRGDRGRGGRGGRGDGRGG 292
G R +GG G+ G+GG
Sbjct: 457 --------GRRKKGGWFGKHRGQGG 473
Score = 34.3 bits (77), Expect = 0.77
Identities = 24/69 (34%), Positives = 26/69 (36%), Gaps = 2/69 (2%)
Query: 28 SSGFGGGGGDGRGGGRGRGG--SGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPG 85
+ G GG GG G GGG G GG G G A G A + G
Sbjct: 115 AGGAGGAGGAGAGGGAGAGGGAGGAGGAGAGGGAGAGGGAGGAGAGGGAGGAGGAGAGGG 174
Query: 86 AGRGHGRGG 94
AG G G GG
Sbjct: 175 AGAGGGAGG 183
Score = 33.5 bits (75), Expect = 1.3
Identities = 17/38 (44%), Positives = 17/38 (44%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
G G G G G G A G G G GG G G G GG
Sbjct: 119 GGAGGAGAGGGAGAGGGAGGAGGAGAGGGAGAGGGAGG 156
Score = 33.1 bits (74), Expect = 1.7
Identities = 25/69 (36%), Positives = 27/69 (38%), Gaps = 13/69 (18%)
Query: 33 GGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNES--KPDATDSPI-----PPG 85
GG GRG GRGRG G G APG P + +P S I G
Sbjct: 35 GGDNHGRGRGRGRGRGG------GRPGAPGGSGSGPRHRDGVRRPQKRPSCIGCKGTHGG 88
Query: 86 AGRGHGRGG 94
G G G GG
Sbjct: 89 TGAGAGAGG 97
Score = 33.1 bits (74), Expect = 1.7
Identities = 30/92 (32%), Positives = 32/92 (34%), Gaps = 18/92 (19%)
Query: 201 GGGRGRGKPLEEAAQEAPQAPVVNRHIRVRQTPADAESDNVPRRQPMNRFVRDDGDGSGR 260
G GRGRG A + P RH D V R Q + G G
Sbjct: 44 GRGRGRGGGRPGAPGGSGSGP---RH-----------RDGVRRPQKRPSCIGCKGTHGGT 89
Query: 261 GRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
G G G G G G G GG G G G GG
Sbjct: 90 GAGAGAG----GAGAGGAGAGGGAGAGGGAGG 117
Score = 32.7 bits (73), Expect = 2.3
Identities = 21/67 (31%), Positives = 23/67 (33%), Gaps = 6/67 (8%)
Query: 28 SSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAG 87
+ G G GGG G GGG G G+G G G GAG
Sbjct: 166 AGGAGAGGGAGAGGGAGGAGAG------GGAGGAGGAGAGGGAGAGGAGGAGGAGAGGAG 219
Query: 88 RGHGRGG 94
G G GG
Sbjct: 220 AGGGAGG 226
Score = 32.7 bits (73), Expect = 2.3
Identities = 22/67 (32%), Positives = 24/67 (34%), Gaps = 13/67 (19%)
Query: 28 SSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAG 87
+ G G GGG G GGG G G+G G A G GAG
Sbjct: 139 AGGAGAGGGAGAGGGAGGAGAGGGAGGAGGAGAGGGAGAGGGAG-------------GAG 185
Query: 88 RGHGRGG 94
G G GG
Sbjct: 186 AGGGAGG 192
Score = 32.7 bits (73), Expect = 2.3
Identities = 22/67 (32%), Positives = 25/67 (36%), Gaps = 4/67 (5%)
Query: 28 SSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAG 87
+ G G GGG G GG G GG+G G A G + GAG
Sbjct: 215 AGGAGAGGGAGGAGGAGAGGAGAGGAGAGGAGAGG----AGGAGAGGAGGAGAGGAGGAG 270
Query: 88 RGHGRGG 94
G G GG
Sbjct: 271 AGGGAGG 277
Score = 32.3 bits (72), Expect = 2.9
Identities = 18/38 (47%), Positives = 18/38 (47%), Gaps = 3/38 (7%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
G G G G G G G A G G G GG G G G GG
Sbjct: 104 GAGGGAGAGGGAGG---AGGAGGAGAGGGAGAGGGAGG 138
Score = 32.0 bits (71), Expect = 3.8
Identities = 25/69 (36%), Positives = 29/69 (41%), Gaps = 13/69 (18%)
Query: 253 DDGDGSGRGRGRGRGRDVYA-----------RGRGDRGRG-GRG-GRGDGRGGFKRYGDD 299
D+G G+G G G G D RG + GRG GRG GRG GR G
Sbjct: 3 DEGPGTGPGNGLGEKGDTSGPEGSGGSGPQRRGGDNHGRGRGRGRGRGGGRPGAPGGSGS 62
Query: 300 RTSHQDIAR 308
H+D R
Sbjct: 63 GPRHRDGVR 71
Score = 31.2 bits (69), Expect = 6.5
Identities = 22/66 (33%), Positives = 24/66 (36%), Gaps = 4/66 (6%)
Query: 29 SGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGR 88
+G G GG G GGG G GG G A G A + GAG
Sbjct: 95 AGGAGAGGAGAGGGAGAGGGAGGAGGAGGAGAGGG----AGAGGGAGGAGGAGAGGGAGA 150
Query: 89 GHGRGG 94
G G GG
Sbjct: 151 GGGAGG 156
Score = 31.2 bits (69), Expect = 6.5
Identities = 16/37 (43%), Positives = 17/37 (45%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRG 291
G G+G G G G A G G G G GG G G G
Sbjct: 187 GGGAGGAGGAGAGGGAGAGGAGGAGGAGAGGAGAGGG 223
Score = 30.8 bits (68), Expect = 8.6
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRG-GRGDGRGG 292
G G+G G G G G G G G GG G G G G GG
Sbjct: 141 GAGAGGGAGAGGGAGGAGAGGGAGGAGGAGAGGGAGAGG 179
Score = 30.8 bits (68), Expect = 8.6
Identities = 29/102 (28%), Positives = 32/102 (30%), Gaps = 23/102 (22%)
Query: 28 SSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAG 87
+ G G GG G G G G GG+G G A + GAG
Sbjct: 258 AGGAGAGGAGGAGAGGGAGGAGA-----GGGAGGAGAGGAGGAGAGGAGGAGAGGAGGAG 312
Query: 88 RGHGRGGTVPDFPSFSFSSFMSSIQQPGTGRGR----GRGRG 125
G G G G GRGR GRGRG
Sbjct: 313 AGGGAGA--------------GGAGAGGGGRGRGGSGGRGRG 340
Score = 30.8 bits (68), Expect = 8.6
Identities = 18/39 (46%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRG-GRGDGRGG 292
G G+G G G G G G G G GG G G G G GG
Sbjct: 168 GAGAGGGAGAGGGAGGAGAGGGAGGAGGAGAGGGAGAGG 206
>MYSB_ACACA (P19706) Myosin heavy chain IB (Myosin heavy chain IL)
Length = 1147
Score = 43.9 bits (102), Expect = 0.001
Identities = 40/104 (38%), Positives = 45/104 (42%), Gaps = 20/104 (19%)
Query: 24 PFSTSSGFGGGGGDGRGGGRG-RGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPI 82
P T SG GGG G GRGGG G RG +G FG G P V +++P A P
Sbjct: 911 PNWTPSGGGGGYGGGRGGGGGGRGAAGGGRGGFGGGGGGGYSQP---VAQAQPVA-QVPQ 966
Query: 83 PPGAGRGHGRGGTVPDFPSFSFSSFMSSIQQPGTGR-GRGRGRG 125
P A GRGG + PG GR G G GRG
Sbjct: 967 PVAAVPSAGRGG--------------PGMGGPGAGRGGPGMGRG 996
Score = 43.1 bits (100), Expect = 0.002
Identities = 49/147 (33%), Positives = 56/147 (37%), Gaps = 27/147 (18%)
Query: 23 VPFSTSSGFG-GGGGDGRGG-GRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDS 80
VP + G G GG G GRGG G GRGG G PG P +
Sbjct: 971 VPSAGRGGPGMGGPGAGRGGPGMGRGGPG--------MGGPGAGRGGPGMGGPGGPGRGG 1022
Query: 81 PIPPGAGR------GHGRGGTVPDFPSFSFSSFMSS------IQQPGTGR-GRGRGRGFD 127
P PGAGR G GRGG P + + + PG GR G G GRG
Sbjct: 1023 PGGPGAGRGGPGGPGAGRGGPGMGGPGGAGRGGPGAGRGGPGMGGPGAGRGGPGAGRGAA 1082
Query: 128 PLPPQFENDSVPKKPVFIKREDNVSQT 154
P P + P KP D +QT
Sbjct: 1083 PAPA----PAAPAKPQVKALYDYDAQT 1105
Score = 36.6 bits (83), Expect = 0.16
Identities = 19/38 (50%), Positives = 20/38 (52%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
G G+GRG G G G G G GRGG G GRGG
Sbjct: 1025 GPGAGRGGPGGPGAGRGGPGMGGPGGAGRGGPGAGRGG 1062
Score = 35.4 bits (80), Expect = 0.35
Identities = 21/38 (55%), Positives = 22/38 (57%), Gaps = 7/38 (18%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
G G+GRG G G G G G GRGG GG G GRGG
Sbjct: 1002 GPGAGRG-GPGMG------GPGGPGRGGPGGPGAGRGG 1032
Score = 34.7 bits (78), Expect = 0.59
Identities = 21/38 (55%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
G G G G GRG G GRG G GGRGG G G GG
Sbjct: 917 GGGGGYGGGRGGG----GGGRGAAG-GGRGGFGGGGGG 949
Score = 32.3 bits (72), Expect = 2.9
Identities = 18/37 (48%), Positives = 18/37 (48%), Gaps = 10/37 (27%)
Query: 257 GSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGF 293
G G G G GRG G GGRG G GRGGF
Sbjct: 917 GGGGGYGGGRGG----------GGGGRGAAGGGRGGF 943
Score = 32.3 bits (72), Expect = 2.9
Identities = 19/38 (50%), Positives = 19/38 (50%), Gaps = 4/38 (10%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
G G G G GRG G GRGG GG G GRGG
Sbjct: 1009 GPGMGGPGGPGRG----GPGGPGAGRGGPGGPGAGRGG 1042
Score = 32.0 bits (71), Expect = 3.8
Identities = 29/84 (34%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRG--GRGDGRG--GFKRYGDDRTSHQDIARSN 310
G G+GRG G RG GRGG G G G GRG G R + A+
Sbjct: 1035 GPGAGRGGPGMGGPGGAGRGGPGAGRGGPGMGGPGAGRGGPGAGRGAAPAPAPAAPAKPQ 1094
Query: 311 ADGLYVGDNADGEKLAKKLGPEIM 334
LY D G++L K G I+
Sbjct: 1095 VKALYDYDAQTGDELTFKEGDTII 1118
>GDF7_MOUSE (P43029) Growth/differentiation factor 7 precursor
(GDF-7)
Length = 461
Score = 43.9 bits (102), Expect = 0.001
Identities = 33/97 (34%), Positives = 40/97 (41%), Gaps = 9/97 (9%)
Query: 200 PGGGRGRGKPLEEAAQEAPQAPVVNRHIRVRQTPADAESDNVPRRQPMNRFVRDDGDGSG 259
PGGG G G EE A + + R+ A A + P D G G+G
Sbjct: 248 PGGGDGGGTAAEERALLVISSRTQRKESLFREIRAQARALRAAAEPPP-----DPGPGAG 302
Query: 260 RGR----GRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
+ GR R R A RG +G GG GG G G GG
Sbjct: 303 SRKANLGGRRRRRTALAGTRGAQGSGGGGGGGGGGGG 339
Score = 35.8 bits (81), Expect = 0.27
Identities = 28/89 (31%), Positives = 29/89 (32%), Gaps = 34/89 (38%)
Query: 6 GVRLQNSTISNATRQTLVPFSTSSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPN 65
G R N R L + G GGGGG G GGG G GG G
Sbjct: 302 GSRKANLGGRRRRRTALAGTRGAQGSGGGGGGGGGGGGGGGGGG---------------- 345
Query: 66 PTPNVNESKPDATDSPIPPGAGRGHGRGG 94
GAGRGHGR G
Sbjct: 346 ------------------GGAGRGHGRRG 356
Score = 35.4 bits (80), Expect = 0.35
Identities = 20/48 (41%), Positives = 24/48 (49%), Gaps = 5/48 (10%)
Query: 2 RGTIGVRLQNSTISNATRQTLVPFSTSSGFGGGGGDGRGGGRGRGGSG 49
+ +G R + T TR + SG GGGGG G GGG G GG G
Sbjct: 305 KANLGGRRRRRTALAGTRG-----AQGSGGGGGGGGGGGGGGGGGGGG 347
>FBRL_DROER (Q8I1F4) Fibrillarin
Length = 345
Score = 43.9 bits (102), Expect = 0.001
Identities = 26/42 (61%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 255 GDGSGRGRGRGRGRDVYARG--RGDRGRGGR-GGRGDGRGGF 293
G G G GRGRG G D RG G RG GGR GG G GRGGF
Sbjct: 34 GGGFGGGRGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGGF 75
Score = 43.5 bits (101), Expect = 0.001
Identities = 34/84 (40%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 252 RDDGDGSGRG----RGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYGDDRTSHQD-- 305
R G G GRG RG G GR RG G RG GGRGG G G K + H+
Sbjct: 64 RGGGGGGGRGGFGGRGGGGGRGGGGRGGGGRGGGGRGGGAGGFKGGKTVTIEPHRHEGVF 123
Query: 306 IARSNADGLYV-----GDNADGEK 324
IAR D L G GEK
Sbjct: 124 IARGKEDALVTRNFVPGSEVYGEK 147
Score = 42.4 bits (98), Expect = 0.003
Identities = 25/47 (53%), Positives = 26/47 (55%), Gaps = 9/47 (19%)
Query: 257 GSGRGRGRGRGRDVY-------ARGRGDRGRGGR--GGRGDGRGGFK 294
G GRG G G GR + RG G RG GGR GGRG G GGFK
Sbjct: 61 GGGRGGGGGGGRGGFGGRGGGGGRGGGGRGGGGRGGGGRGGGAGGFK 107
Score = 40.8 bits (94), Expect = 0.008
Identities = 25/43 (58%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYG 297
G G G G GRGRG G GD RGGRGG G GRGG R G
Sbjct: 32 GGGGGFGGGRGRG------GGGD--RGGRGGFGGGRGGGGRGG 66
Score = 40.4 bits (93), Expect = 0.011
Identities = 34/96 (35%), Positives = 35/96 (36%), Gaps = 23/96 (23%)
Query: 30 GFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRG 89
G GGGGG G GGGRGRGG G G G G GRG
Sbjct: 28 GGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGRG----------------------GGGRG 65
Query: 90 HGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRG 125
G GG F + G GRG G GRG
Sbjct: 66 GGGGGGRGGFGGRGGGGGRGGGGRGGGGRG-GGGRG 100
Score = 39.7 bits (91), Expect = 0.018
Identities = 27/59 (45%), Positives = 28/59 (46%), Gaps = 13/59 (22%)
Query: 255 GDGSGRGRGRGR---GRDVYARGRGDRGRGGRGGRG----------DGRGGFKRYGDDR 300
G G GRGRG G GR + GRG GRGG GG G GRGG R G R
Sbjct: 36 GFGGGRGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGGFGGRGGGGGRGGGGRGGGGR 94
Score = 35.0 bits (79), Expect = 0.45
Identities = 23/51 (45%), Positives = 24/51 (46%), Gaps = 2/51 (3%)
Query: 252 RDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDG--RGGFKRYGDDR 300
R G G G G G RGR G G G GG GRG G RGG +G R
Sbjct: 9 RGGGGGGGGGGGGFRGRGGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGR 59
>WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)
Length = 520
Score = 43.5 bits (101), Expect = 0.001
Identities = 49/176 (27%), Positives = 54/176 (29%), Gaps = 49/176 (27%)
Query: 30 GFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRG 89
G GGGGG G GGG G GG G P P + + P T PP
Sbjct: 324 GGGGGGGGGGGGGGGGGGQPLRPPVVGSNKGRSGPLPPVPMGGAPPPPTPRGPPP----- 378
Query: 90 HGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRGFDPLPPQFENDSVPKKPVFIKRED 149
GRGG P P P TGR P PP P P
Sbjct: 379 PGRGGPPPPPP-------------PATGRS-------GPPPPPLPGAGGPPAP------- 411
Query: 150 NVSQTDANDFSPPKNPVFTRSEDVRPVEPIDLSGDSESDNRFVMTVPKVLPGGGRG 205
PP P P+ P +SG S + PGGGRG
Sbjct: 412 -----PPPPPPPPPPPCPGSGPAPPPLPPTPVSGGSPA------------PGGGRG 450
>FBRL_DROME (Q9W1V3) Fibrillarin
Length = 344
Score = 43.5 bits (101), Expect = 0.001
Identities = 34/84 (40%), Positives = 36/84 (42%), Gaps = 11/84 (13%)
Query: 252 RDDGDGSGRG----RGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYGDDRTSHQD-- 305
R G G GRG RG G GR RG G RG GGRGG G G K + H+
Sbjct: 63 RGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRGGGAGGFKGGKTVTIEPHRHEGVF 122
Query: 306 IARSNADGLYV-----GDNADGEK 324
IAR D L G GEK
Sbjct: 123 IARGKEDALVTRNFVPGSEVYGEK 146
Score = 43.5 bits (101), Expect = 0.001
Identities = 25/47 (53%), Positives = 26/47 (55%), Gaps = 9/47 (19%)
Query: 257 GSGRGRGRGRGRDVY-------ARGRGDRGRGGR--GGRGDGRGGFK 294
G GRG G G GR + RG G RG GGR GGRG G GGFK
Sbjct: 60 GGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRGGGGRGGGAGGFK 106
Score = 41.6 bits (96), Expect = 0.005
Identities = 25/42 (59%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 255 GDGSGRGRGRGRGRDVYARG--RGDRGRGGR-GGRGDGRGGF 293
G G G GRGRG G D RG G RG GGR GG G GRG F
Sbjct: 33 GGGFGGGRGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGAF 74
Score = 40.8 bits (94), Expect = 0.008
Identities = 35/101 (34%), Positives = 36/101 (34%), Gaps = 23/101 (22%)
Query: 25 FSTSSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPP 84
F G GGGGG G GGGRGRGG G G G
Sbjct: 22 FRGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGRG---------------------- 59
Query: 85 GAGRGHGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRG 125
G GRG G GG F + G GRG G GRG
Sbjct: 60 GGGRGGGGGGGRGAFGGRGGGGGRGGGGRGGGGRG-GGGRG 99
Score = 40.8 bits (94), Expect = 0.008
Identities = 25/43 (58%), Positives = 25/43 (58%), Gaps = 8/43 (18%)
Query: 255 GDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYG 297
G G G G GRGRG G GD RGGRGG G GRGG R G
Sbjct: 31 GGGGGFGGGRGRG------GGGD--RGGRGGFGGGRGGGGRGG 65
Score = 40.4 bits (93), Expect = 0.011
Identities = 24/49 (48%), Positives = 26/49 (52%), Gaps = 3/49 (6%)
Query: 255 GDGSGRGRGRGR---GRDVYARGRGDRGRGGRGGRGDGRGGFKRYGDDR 300
G G GRGRG G GR + GRG GRGG GG G G G + G R
Sbjct: 35 GFGGGRGRGGGGDRGGRGGFGGGRGGGGRGGGGGGGRGAFGGRGGGGGR 83
Score = 33.5 bits (75), Expect = 1.3
Identities = 19/35 (54%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 257 GSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRG 291
G G G G G G RGRG G GG GG G GRG
Sbjct: 11 GGGGGGGGGGG----FRGRGGGGGGGGGGFGGGRG 41
Score = 32.7 bits (73), Expect = 2.3
Identities = 23/49 (46%), Positives = 23/49 (46%), Gaps = 9/49 (18%)
Query: 252 RDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYGDDR 300
R G G G G G RGR G G G GG G G GRGG G DR
Sbjct: 9 RGGGGGGGGGGGGFRGR-----GGGGGGGGGGFGGGRGRGG----GGDR 48
Score = 32.3 bits (72), Expect = 2.9
Identities = 23/65 (35%), Positives = 25/65 (38%), Gaps = 13/65 (20%)
Query: 30 GFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRG 89
GFGGG G G GG G GG G FG + G + G GRG
Sbjct: 53 GFGGGRGGGGRGGGGGGGRGA----FGGRGGGGGRGGGGRGGGGR---------GGGGRG 99
Query: 90 HGRGG 94
G GG
Sbjct: 100 GGAGG 104
>MBD2_MOUSE (Q9Z2E1) Methyl-CpG binding protein 2 (Methyl-CpG
binding domain protein 2)
Length = 414
Score = 43.1 bits (100), Expect = 0.002
Identities = 33/94 (35%), Positives = 39/94 (41%), Gaps = 7/94 (7%)
Query: 201 GGGRGRGKPLEEAAQEAPQAPVVNRHIRVRQTPADAESDNVPRRQPMNRFV--RDDGDGS 258
G G G +E+ Q + AP +R ++ V R G G
Sbjct: 23 GSGAGGDSAIEQGGQGSALAPSPVSGVRREGARGGGRGRGRWKQAARGGGVCGRGRGRGR 82
Query: 259 GRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGG 292
GRGRGRGRG RGRG GG G GDG GG
Sbjct: 83 GRGRGRGRG-----RGRGRPQSGGSGLGGDGGGG 111
Score = 42.0 bits (97), Expect = 0.004
Identities = 24/44 (54%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Query: 252 RDDGDGSGRGRGRGRGR---DVYARGRGDRGRGGRGGRGDGRGG 292
R G G GRGRGRGRGR G G G GG GG G G GG
Sbjct: 78 RGRGRGRGRGRGRGRGRGRPQSGGSGLGGDGGGGAGGCGVGSGG 121
Score = 37.7 bits (86), Expect = 0.070
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 246 PMNRFVRDDGDGSGRGRGRGRGRDVYARGRGDRGRGGRGGRGDGRGGFKRYGDDR 300
P++ R+ G GRGRGR + ARG G GRG GRG GRG + G R
Sbjct: 45 PVSGVRREGARGGGRGRGRWKQA---ARGGGVCGRGRGRGRGRGRGRGRGRGRGR 96
Score = 32.7 bits (73), Expect = 2.3
Identities = 54/203 (26%), Positives = 74/203 (35%), Gaps = 24/203 (11%)
Query: 33 GGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPTPNVNESKPDATDSPIPPGAGRGHGR 92
GGG GRG GRGRG G G P S G G G G
Sbjct: 70 GGGVCGRGRGRGRGR--------GRGRGRGRGRGRPQSGGSGLGGDGGGGAGGCGVGSG- 120
Query: 93 GGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRGFD--PLPPQFENDSVPKKPVFIKREDN 150
GG P F S SS P R G+ D LPP ++ + V +K +
Sbjct: 121 GGVAPRRDPVPFPS-GSSGPGPRGPRATESGKRMDCPALPPGWKKEEVIRKSGL-----S 174
Query: 151 VSQTDANDFSPPKNPVFTRSEDVRPV-EPIDLSGDSESDNRFVMTVPKVLPGGGRGRGKP 209
++D FSP ++ + R + +DLS + M K+ R R P
Sbjct: 175 AGKSDVYYFSPSGKKFRSKPQLARYLGNAVDLSSFDFRTGK--MMPSKLQKNKQRLRNDP 232
Query: 210 LEEAAQEAPQAPVVNRHIRVRQT 232
L + + P +N + +RQT
Sbjct: 233 LNQNKGK----PDLNTTLPIRQT 251
Score = 31.2 bits (69), Expect = 6.5
Identities = 25/68 (36%), Positives = 29/68 (41%), Gaps = 9/68 (13%)
Query: 24 PFSTSSGFGGGGGDGRGG-GRGRGGS-----GTVTFNFGEKAAPGNPNPTPNVNESKPDA 77
P S SG GG GG G GG G G GG V F G + PG P + + D
Sbjct: 97 PQSGGSGLGGDGGGGAGGCGVGSGGGVAPRRDPVPFPSG-SSGPGPRGPRATESGKRMDC 155
Query: 78 TDSPIPPG 85
+PPG
Sbjct: 156 --PALPPG 161
>IF2_STRCO (Q8CJQ8) Translation initiation factor IF-2
Length = 1033
Score = 42.7 bits (99), Expect = 0.002
Identities = 34/110 (30%), Positives = 40/110 (35%), Gaps = 21/110 (19%)
Query: 24 PFSTSSGFGGGGGDGRGGGRGRGGSGTVTFNFGEKAAP---GNPNPTPNVNESKPDATDS 80
P G GGG + G R G++ G A P G P P P + +P A
Sbjct: 256 PRPQGPGGQGGGPRPQAPGGNRPSPGSMPRPQGGGAGPRPGGGPRPNPGMMPQRPAAGPR 315
Query: 81 PIPPGAGRGHGRGGTVPDFPSFSFSSFMSSIQQPGTGRGRGRGRGFDPLP 130
P P G GRG G G +PG G GR G GF P
Sbjct: 316 PGPGGGGRGPGGAG------------------RPGGGGGRPGGGGFAGRP 347
Score = 42.0 bits (97), Expect = 0.004
Identities = 75/262 (28%), Positives = 83/262 (31%), Gaps = 48/262 (18%)
Query: 56 GEKAAPGNPNPTPNVNESKPDATDSPIPPGAGR-------GHGRGGTVPDFPSFSFSSFM 108
G + PG P P P + P+ T P P A G GG P P +
Sbjct: 124 GPRPTPG-PKPAPRPAPAAPEFTAPPAAPAAPSTPAPAPSGPKPGGARPGAPKPGGARPS 182
Query: 109 SSIQQPGTGRGRGRGRGFDPLPPQFENDSVPKKPVFIKREDNVSQTDANDFSPPKNPVFT 168
Q G G+GR G P P P P R N N F+ N
Sbjct: 183 GPGQDRGQQGGQGRPGGQRPGAPAQRPGGRPGGP----RPGN------NPFTSGGNAGMA 232
Query: 169 RSEDVRPVEPIDLSGDSESDNRFVMTVPKVLPGGGRGRGKPLEEAAQEAPQAPVVNRHI- 227
R RP G P PGGG P + PQAP NR
Sbjct: 233 RPSAPRPQGGPRPGG------------PGGAPGGGPRPQGPGGQGGGPRPQAPGGNRPSP 280
Query: 228 ----RVRQTPADAESDNVPRRQP------MNRFVRDDGDGSGRGRGRGRGRDVYARGR-- 275
R + A PR P R G GRG G G GR GR
Sbjct: 281 GSMPRPQGGGAGPRPGGGPRPNPGMMPQRPAAGPRPGPGGGGRGPG-GAGRPGGGGGRPG 339
Query: 276 --GDRGR--GGRGGRGDGRGGF 293
G GR GG GGR G GGF
Sbjct: 340 GGGFAGRPGGGGGGRPGGGGGF 361
Score = 33.5 bits (75), Expect = 1.3
Identities = 26/85 (30%), Positives = 32/85 (37%), Gaps = 3/85 (3%)
Query: 30 GFGGGGGDGRGGGR--GRGGSGTVTFNFGEKAAPG-NPNPTPNVNESKPDATDSPIPPGA 86
GFGGGGG GGR G GG G FG P + + +A +P G
Sbjct: 370 GFGGGGGRPGFGGRPGGPGGRGGTQGAFGRPGGPARRGRKSKRQRRQEYEAMQAPSVGGV 429
Query: 87 GRGHGRGGTVPDFPSFSFSSFMSSI 111
G G T+ S + F I
Sbjct: 430 MLPRGNGETIRLSRGASLTDFAEKI 454
>CSS1_PIG (P04574) Calpain small subunit 1 (CSS1)
(Calcium-dependent protease small subunit 1)
(Calcium-dependent protease small subunit) (CDPS)
(Calpain regulatory subunit) (Calcium-activated neutral
proteinase small subunit) (CANP small subunit)
Length = 266
Score = 42.7 bits (99), Expect = 0.002
Identities = 24/47 (51%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Query: 29 SGFGGGGGDGRGGGRGRGGSGT-------VTFNFGEKAAPGNPNPTP 68
SG GGGGG G GGG G GG GT V E AA NP P P
Sbjct: 34 SGAGGGGGGGGGGGGGGGGGGTAMRILGGVISAISEAAAQYNPEPPP 80
Score = 33.5 bits (75), Expect = 1.3
Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 4/50 (8%)
Query: 247 MNRFVRDDGDGSGRGRGRGRGRDVYA----RGRGDRGRGGRGGRGDGRGG 292
+N F++ G G G G G G G G G G GG GG G G GG
Sbjct: 4 VNSFLKGGGGGGGGGGGLGGGLGNVLGGLISGAGGGGGGGGGGGGGGGGG 53
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.313 0.137 0.403
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,506,025
Number of Sequences: 164201
Number of extensions: 4039067
Number of successful extensions: 40209
Number of sequences better than 10.0: 694
Number of HSP's better than 10.0 without gapping: 349
Number of HSP's successfully gapped in prelim test: 369
Number of HSP's that attempted gapping in prelim test: 16936
Number of HSP's gapped (non-prelim): 10143
length of query: 502
length of database: 59,974,054
effective HSP length: 114
effective length of query: 388
effective length of database: 41,255,140
effective search space: 16006994320
effective search space used: 16006994320
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC137839.10