BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC137602.4 - phase: 0
(130 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
YNM4_YEAST (P53919) Hypothetical 54.9 kDa protein in SPC98-TOM70... 35 0.038
YB4F_SCHPO (O14360) Hypothetical protein C30D10.15 in chromosome II 33 0.084
TBA_TETTH (P41351) Tubulin alpha chain 31 0.55
TBA_TETPY (P10872) Tubulin alpha chain 31 0.55
CLA4_ASHGO (Q9HFW2) Serine/threonine-protein kinase CLA4 (EC 2.7... 31 0.55
TBA1_CHLRE (P09204) Tubulin alpha-1 chain 30 0.71
YAE7_YEAST (P39723) Hypothetical 72.1 kDa protein in ACS1-GCV3 i... 30 0.93
TBA_TOXGO (P10873) Tubulin alpha chain (Alpha tubulin) 30 0.93
TBA_OXYGR (P28287) Tubulin alpha chain 30 0.93
TBA_NEOCA (Q71G51) Tubulin alpha chain (Alpha tubulin) 30 0.93
TBA_EUGGR (P33625) Tubulin alpha chain 30 0.93
TBA1_ANEPH (P33623) Tubulin alpha-1 chain 30 0.93
TBA_EUPOC (Q08114) Tubulin alpha chain 30 1.2
TBA1_VOLCA (P11481) Tubulin alpha-1/alpha-2 chain 30 1.2
TBA_PRUDU (P33629) Tubulin alpha chain 29 1.6
TBA6_ARATH (P29511) Tubulin alpha-6 chain 29 1.6
TBA4_GOSHI (Q6VAF9) Tubulin alpha-4 chain (Alpha-4 tubulin) 29 1.6
TBA2_ARATH (P29510) Tubulin alpha-2/alpha-4 chain 29 1.6
TBA1_PEA (P46259) Tubulin alpha-1 chain 29 1.6
MUTY_BUCAI (P57617) A/G-specific adenine glycosylase (EC 3.2.2.-) 29 1.6
>YNM4_YEAST (P53919) Hypothetical 54.9 kDa protein in SPC98-TOM70
intergenic region
Length = 492
Score = 34.7 bits (78), Expect = 0.038
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Query: 6 LIEGSILWITERQTSLGLIDEIFGQVKNPYYAVRYNSEK 44
L EGSI + +R T +G++ E+FG ++NP+Y ++ K
Sbjct: 164 LKEGSIFCLEDR-TLIGMLTEVFGPLQNPFYRIKLPDSK 201
>YB4F_SCHPO (O14360) Hypothetical protein C30D10.15 in chromosome II
Length = 516
Score = 33.5 bits (75), Expect = 0.084
Identities = 17/43 (39%), Positives = 26/43 (59%), Gaps = 1/43 (2%)
Query: 2 EMIPLIEGSILWITERQTSLGLIDEIFGQVKNPYYAVRYNSEK 44
E I E ++L +R +G I E FG V +PYY VR+++E+
Sbjct: 273 EKIVFDEKTVLCFEDRSI-IGYIHETFGPVSSPYYIVRFSTEE 314
>TBA_TETTH (P41351) Tubulin alpha chain
Length = 449
Score = 30.8 bits (68), Expect = 0.55
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
ITE QT+L I + + YA ++EK E VAE N P +MM +C
Sbjct: 252 ITEFQTNLVPYPRIHFMLSS--YAPIISAEKAYHEQLS---VAEITNSAFEPANMMAKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ + TIKT
Sbjct: 307 PRHGKYMACSMMYRGDVVPKDVNASIATIKT 337
>TBA_TETPY (P10872) Tubulin alpha chain
Length = 449
Score = 30.8 bits (68), Expect = 0.55
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
ITE QT+L I + + YA ++EK E VAE N P +MM +C
Sbjct: 252 ITEFQTNLVPYPRIHFMLSS--YAPIISAEKAYHEQLS---VAEITNSAFEPANMMAKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ + TIKT
Sbjct: 307 PRHGKYMACSMMYRGDVVPKDVNASIATIKT 337
>CLA4_ASHGO (Q9HFW2) Serine/threonine-protein kinase CLA4 (EC
2.7.1.37)
Length = 793
Score = 30.8 bits (68), Expect = 0.55
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 92 NIIKEVVTIKTPIERMENNIKQIPLKDGSIPTMPVA 127
N + V T ++P ER+ NN+ + L +P PVA
Sbjct: 357 NSVSSVATKESPTERLLNNLSETSLMQKQLPAKPVA 392
>TBA1_CHLRE (P09204) Tubulin alpha-1 chain
Length = 451
Score = 30.4 bits (67), Expect = 0.71
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
ITE QT+L I + + YA ++EK E VAE N P SMM +C
Sbjct: 252 ITEFQTNLVPYPRIHFMLSS--YAPIISAEKAYHEQLS---VAEITNAAFEPASMMVKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ V TIKT
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNASVATIKT 337
>YAE7_YEAST (P39723) Hypothetical 72.1 kDa protein in ACS1-GCV3
intergenic region
Length = 622
Score = 30.0 bits (66), Expect = 0.93
Identities = 13/34 (38%), Positives = 22/34 (64%)
Query: 91 KNIIKEVVTIKTPIERMENNIKQIPLKDGSIPTM 124
KN+ KE+ K I+ + I++IP KDG+ P++
Sbjct: 65 KNLEKELTNAKIKIQVLYEYIRRIPNKDGNAPSL 98
>TBA_TOXGO (P10873) Tubulin alpha chain (Alpha tubulin)
Length = 453
Score = 30.0 bits (66), Expect = 0.93
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
+TE QT+L I + + YA ++EK E VAE N P SMM +C
Sbjct: 252 VTEFQTNLVPYPRIHFMLSS--YAPIISAEKAYHEQLS---VAEITNSAFEPASMMAKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ V TIKT
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKT 337
>TBA_OXYGR (P28287) Tubulin alpha chain
Length = 450
Score = 30.0 bits (66), Expect = 0.93
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
+TE QT+L I + + YA ++EK E VAE N P SMM +C
Sbjct: 252 VTEFQTNLVPYPRIHFMLSS--YAPVISAEKAYHEQLS---VAEITNSAFEPASMMAKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ V TIKT
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKT 337
>TBA_NEOCA (Q71G51) Tubulin alpha chain (Alpha tubulin)
Length = 453
Score = 30.0 bits (66), Expect = 0.93
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
+TE QT+L I + + YA ++EK E VAE N P SMM +C
Sbjct: 252 VTEFQTNLVPYPRIHFMLSS--YAPIISAEKAYHEQLS---VAEITNSAFEPASMMAKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ V TIKT
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKT 337
>TBA_EUGGR (P33625) Tubulin alpha chain
Length = 451
Score = 30.0 bits (66), Expect = 0.93
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
ITE QT+L I + + YA ++EK E VAE N P SMM +C
Sbjct: 252 ITEFQTNLVPYPRIHFVLSS--YAPIISAEKAYHEQLS---VAEITNAAFEPASMMAKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ V TIKT
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNASVATIKT 337
>TBA1_ANEPH (P33623) Tubulin alpha-1 chain
Length = 451
Score = 30.0 bits (66), Expect = 0.93
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
+TE QT+L I + + YA ++EK E VAE N P SMM +C
Sbjct: 252 VTEFQTNLVPYPRIHFMLSS--YAPVISAEKAYHEQLS---VAEITNSAFEPASMMAKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ V TIKT
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKT 337
>TBA_EUPOC (Q08114) Tubulin alpha chain
Length = 450
Score = 29.6 bits (65), Expect = 1.2
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
+TE QT+L I + + YA ++EK E VAE N P SMM +C
Sbjct: 252 VTEFQTNLVPYPRIHFMLSS--YAPVISAEKAYHEQLS---VAEITNSSFEPASMMAKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ V TIKT
Sbjct: 307 PRHGKYMACCMMYRGDVVPKDVNAAVATIKT 337
>TBA1_VOLCA (P11481) Tubulin alpha-1/alpha-2 chain
Length = 451
Score = 29.6 bits (65), Expect = 1.2
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
+TE QT+L I + + YA ++EK E VAE N P SMM +C
Sbjct: 252 VTEFQTNLVPYPRIHFMLSS--YAPIISAEKAYHEQLS---VAEITNAAFEPASMMVKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ V TIKT
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKT 337
>TBA_PRUDU (P33629) Tubulin alpha chain
Length = 450
Score = 29.3 bits (64), Expect = 1.6
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
+TE QT+L I + + YA ++EK E VAE N P SMM +C
Sbjct: 252 VTEFQTNLVPYPRIHFMLSS--YAPVISAEKAYHEQLS---VAEITNSAFEPSSMMAKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ V TIKT
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKT 337
>TBA6_ARATH (P29511) Tubulin alpha-6 chain
Length = 450
Score = 29.3 bits (64), Expect = 1.6
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
+TE QT+L I + + YA ++EK E VAE N P SMM +C
Sbjct: 252 VTEFQTNLVPYPRIHFMLSS--YAPVISAEKAFHEQLS---VAEITNSAFEPASMMAKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ V TIKT
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKT 337
>TBA4_GOSHI (Q6VAF9) Tubulin alpha-4 chain (Alpha-4 tubulin)
Length = 450
Score = 29.3 bits (64), Expect = 1.6
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
+TE QT+L I + + YA ++EK E VAE N P SMM +C
Sbjct: 252 VTEFQTNLVPYPRIHFMLSS--YAPVISAEKAYHEQLS---VAEITNSAFEPSSMMAKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ V TIKT
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKT 337
>TBA2_ARATH (P29510) Tubulin alpha-2/alpha-4 chain
Length = 450
Score = 29.3 bits (64), Expect = 1.6
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
+TE QT+L I + + YA ++EK E VAE N P SMM +C
Sbjct: 252 VTEFQTNLVPYPRIHFMLSS--YAPVISAEKAFHEQLS---VAEITNSAFEPASMMAKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ V TIKT
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVGTIKT 337
>TBA1_PEA (P46259) Tubulin alpha-1 chain
Length = 452
Score = 29.3 bits (64), Expect = 1.6
Identities = 28/91 (30%), Positives = 40/91 (43%), Gaps = 7/91 (7%)
Query: 14 ITERQTSLGLIDEIFGQVKNPYYAVRYNSEKGIREGTLISFVAEFVNYVMHPVSMMKRCP 73
+TE QT+L I + + YA ++EK E VAE N P SMM +C
Sbjct: 252 VTEFQTNLVPYPRIHFMLSS--YAPVISAEKAYHEQLS---VAEITNSAFEPSSMMAKCD 306
Query: 74 MKQNFWMMRKRLSTRDC--KNIIKEVVTIKT 102
+ +M + D K++ V TIKT
Sbjct: 307 PRHGKYMACCLMYRGDVVPKDVNAAVATIKT 337
>MUTY_BUCAI (P57617) A/G-specific adenine glycosylase (EC 3.2.2.-)
Length = 350
Score = 29.3 bits (64), Expect = 1.6
Identities = 21/89 (23%), Positives = 43/89 (47%), Gaps = 5/89 (5%)
Query: 28 FGQVKNPYYAVRYNSEKGIREGT---LISFVAEFVNYVMHPVSMMKRCPMKQNFWMMRKR 84
F + KN A+ + EK I T +ISF +F ++++H ++ R P F+ +
Sbjct: 261 FPKFKNKEEALIWLKEKKININTCENMISFFHKFSHFILHINPILIRLPYISEFFKENHK 320
Query: 85 LSTRDCKNIIKEVVTIKTPIERMENNIKQ 113
+ KN + + + P++++ N K+
Sbjct: 321 KIWYNLKN--PQHIGLPRPVQKILENFKK 347
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.138 0.411
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,943,931
Number of Sequences: 164201
Number of extensions: 532644
Number of successful extensions: 1403
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 45
Number of HSP's that attempted gapping in prelim test: 1392
Number of HSP's gapped (non-prelim): 55
length of query: 130
length of database: 59,974,054
effective HSP length: 106
effective length of query: 24
effective length of database: 42,568,748
effective search space: 1021649952
effective search space used: 1021649952
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC137602.4