BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC135565.4 - phase: 0
(137 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
RS24_ARATH (Q9SS17) 40S ribosomal protein S24 245 2e-65
RS24_SPOFR (Q962Q6) 40S ribosomal protein S24 172 1e-43
RS24_XENLA (P02377) 40S ribosomal protein S24 (S19) 171 4e-43
RS24_RAT (P62850) 40S ribosomal protein S24 170 7e-43
RS24_MOUSE (P62849) 40S ribosomal protein S24 170 7e-43
RS24_MESAU (P62848) 40S ribosomal protein S24 (Ribosomal protein... 170 7e-43
RS24_HUMAN (P62847) 40S ribosomal protein S24 170 7e-43
RS24_ICTPU (Q90YQ0) 40S ribosomal protein S24 167 5e-42
RS24_FUGRU (O42387) 40S ribosomal protein S24 166 1e-41
RS24_ORYLA (Q9W6X9) 40S ribosomal protein S24 160 8e-40
RS24_RHIRA (P14249) 40S ribosomal protein S24 159 2e-39
RS24_YEAST (P26782) 40S ribosomal protein S24 (RP50) 153 9e-38
R24B_SCHPO (O59865) 40S ribosomal protein S24-B 150 6e-37
R24A_SCHPO (O13784) 40S ribosomal protein S24-A 146 1e-35
RS24_PYRFU (Q8U442) 30S ribosomal protein S24e 67 2e-11
RS24_PYRHO (P58746) 30S ribosomal protein S24e 61 6e-10
RS24_PYRAB (Q9UY20) 30S ribosomal protein S24e 60 1e-09
RS24_PYRAE (Q8ZV65) 30S ribosomal protein S24e 56 3e-08
RS24_AERPE (Q9YCY0) 30S ribosomal protein S24e 48 6e-06
RS24_METTH (O26367) 30S ribosomal protein S24e 48 7e-06
>RS24_ARATH (Q9SS17) 40S ribosomal protein S24
Length = 133
Score = 245 bits (626), Expect = 2e-65
Identities = 119/132 (90%), Positives = 130/132 (98%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVF 60
MA+KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLAR+Y+VKDPN +FVF
Sbjct: 1 MAEKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARMYEVKDPNAIFVF 60
Query: 61 KFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEKSRKQMKERKNRAKKIR 120
KFRTHFGGGKS+GFGLIYD+VE+AKK+EPKYRL+RNGLDTK+EKSRKQ+KERKNRAKKIR
Sbjct: 61 KFRTHFGGGKSSGFGLIYDTVESAKKFEPKYRLIRNGLDTKIEKSRKQIKERKNRAKKIR 120
Query: 121 GVKKTKAGDAAK 132
GVKKTKAGDA K
Sbjct: 121 GVKKTKAGDAKK 132
>RS24_SPOFR (Q962Q6) 40S ribosomal protein S24
Length = 132
Score = 172 bits (437), Expect = 1e-43
Identities = 86/132 (65%), Positives = 105/132 (79%), Gaps = 1/132 (0%)
Query: 1 MADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVF 60
M + TIRTRKFMTNRLL+RKQ V DVLHPG+ VSK E++EKLA++Y V P+ VFVF
Sbjct: 1 MTEGTATIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVT-PDVVFVF 59
Query: 61 KFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEKSRKQMKERKNRAKKIR 120
F+T+FGGGKSTGF LIYD+++ AKK+EPK+RL R+GL K +RKQ KERKNR KK+R
Sbjct: 60 GFKTNFGGGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKKVR 119
Query: 121 GVKKTKAGDAAK 132
G KK+K G AAK
Sbjct: 120 GTKKSKVGAAAK 131
>RS24_XENLA (P02377) 40S ribosomal protein S24 (S19)
Length = 132
Score = 171 bits (433), Expect = 4e-43
Identities = 87/132 (65%), Positives = 103/132 (77%), Gaps = 5/132 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEKSRKQMKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDS++ AKK EPK+RL ++GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLAKHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAGDAAKAGKKK 137
G AGKKK
Sbjct: 124 NVG----AGKKK 131
>RS24_RAT (P62850) 40S ribosomal protein S24
Length = 133
Score = 170 bits (431), Expect = 7e-43
Identities = 87/131 (66%), Positives = 102/131 (77%), Gaps = 5/131 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEKSRKQMKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDS++ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAGDAAKAGKK 136
G AGKK
Sbjct: 124 NVG----AGKK 130
>RS24_MOUSE (P62849) 40S ribosomal protein S24
Length = 133
Score = 170 bits (431), Expect = 7e-43
Identities = 87/131 (66%), Positives = 102/131 (77%), Gaps = 5/131 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEKSRKQMKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDS++ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAGDAAKAGKK 136
G AGKK
Sbjct: 124 NVG----AGKK 130
>RS24_MESAU (P62848) 40S ribosomal protein S24 (Ribosomal protein
S19)
Length = 133
Score = 170 bits (431), Expect = 7e-43
Identities = 87/131 (66%), Positives = 102/131 (77%), Gaps = 5/131 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEKSRKQMKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDS++ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAGDAAKAGKK 136
G AGKK
Sbjct: 124 NVG----AGKK 130
>RS24_HUMAN (P62847) 40S ribosomal protein S24
Length = 133
Score = 170 bits (431), Expect = 7e-43
Identities = 87/131 (66%), Positives = 102/131 (77%), Gaps = 5/131 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ VIDVLHPG+A V K E++EKLA++Y P+ +FVF FRTH
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVIDVLHPGKATVPKTEIREKLAKMYKTT-PDVIFVFGFRTH 63
Query: 66 FGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEKSRKQMKERKNRAKKIRGVKKT 125
FGGGK+TGFG+IYDS++ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG K
Sbjct: 64 FGGGKTTGFGMIYDSLDYAKKNEPKHRLARHGLYEKKKTSRKQRKERKNRMKKVRGTAKA 123
Query: 126 KAGDAAKAGKK 136
G AGKK
Sbjct: 124 NVG----AGKK 130
>RS24_ICTPU (Q90YQ0) 40S ribosomal protein S24
Length = 131
Score = 167 bits (424), Expect = 5e-42
Identities = 82/128 (64%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Query: 5 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRT 64
+VT+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA++Y P+ VFVF F+T
Sbjct: 4 SVTLRTRKFMTNRLLQRKQMVLDVLHPGKATVPKTEIREKLAKMYKTT-PDVVFVFGFKT 62
Query: 65 HFGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEKSRKQMKERKNRAKKIRGVKK 124
FGGGK+TGF ++YDS++ AKK EPKYRL R+GL K + SRKQ KERKNR KK+RG KK
Sbjct: 63 QFGGGKTTGFAMVYDSLDYAKKNEPKYRLARHGLYEKKKTSRKQRKERKNRMKKVRGTKK 122
Query: 125 TKAGDAAK 132
G A K
Sbjct: 123 ASVGAAGK 130
>RS24_FUGRU (O42387) 40S ribosomal protein S24
Length = 132
Score = 166 bits (420), Expect = 1e-41
Identities = 84/132 (63%), Positives = 101/132 (75%), Gaps = 5/132 (3%)
Query: 6 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTH 65
VT+RTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA++Y P+ VFVF FRT
Sbjct: 5 VTVRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKTT-PDVVFVFGFRTQ 63
Query: 66 FGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEKSRKQMKERKNRAKKIRGVKKT 125
FGGGK+TGF ++YDS++ AKK EPK+RL R+GL K + SRKQ KERKNR KK+RG KK
Sbjct: 64 FGGGKTTGFAMVYDSLDYAKKNEPKHRLARHGLFEKKKTSRKQRKERKNRMKKVRGTKKA 123
Query: 126 KAGDAAKAGKKK 137
G A KKK
Sbjct: 124 SVG----ASKKK 131
>RS24_ORYLA (Q9W6X9) 40S ribosomal protein S24
Length = 132
Score = 160 bits (405), Expect = 8e-40
Identities = 79/127 (62%), Positives = 97/127 (76%), Gaps = 1/127 (0%)
Query: 6 VTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTH 65
VTIRTRKFMTNRLL RKQ V+DVLHPG+A V K E++EKLA++Y P+ VFVF FRT
Sbjct: 5 VTIRTRKFMTNRLLQRKQMVVDVLHPGKATVPKTEIREKLAKMYKTT-PDVVFVFGFRTQ 63
Query: 66 FGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEKSRKQMKERKNRAKKIRGVKKT 125
FGGGK+TGF ++YDS++ AKK EPK+RL +GL K + SRKQ ER+NR KK+R +KK
Sbjct: 64 FGGGKTTGFAMVYDSLDYAKKNEPKHRLATHGLYEKKKTSRKQRTERQNRMKKVRSIKKA 123
Query: 126 KAGDAAK 132
G A K
Sbjct: 124 SVGAAGK 130
>RS24_RHIRA (P14249) 40S ribosomal protein S24
Length = 148
Score = 159 bits (402), Expect = 2e-39
Identities = 80/125 (64%), Positives = 96/125 (76%), Gaps = 1/125 (0%)
Query: 2 ADKAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFK 61
AD AVTIRTRKF+TNRLL RKQ V+DV+HPG ANVSK EL+ K+ ++Y D V VF
Sbjct: 20 ADAAVTIRTRKFLTNRLLQRKQMVVDVIHPGLANVSKDELRSKIGKMYKA-DKEVVSVFG 78
Query: 62 FRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEKSRKQMKERKNRAKKIRG 121
F+THFGGGK+TGF LIYD+VE K +EPK+RLVR GL + RKQ KE+KNR KK RG
Sbjct: 79 FKTHFGGGKTTGFALIYDNVEALKNFEPKHRLVRIGLAEAPKGGRKQRKEKKNREKKFRG 138
Query: 122 VKKTK 126
V+K+K
Sbjct: 139 VRKSK 143
>RS24_YEAST (P26782) 40S ribosomal protein S24 (RP50)
Length = 134
Score = 153 bits (387), Expect = 9e-38
Identities = 83/129 (64%), Positives = 98/129 (75%), Gaps = 2/129 (1%)
Query: 5 AVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRT 64
AVTIRTRK ++N LL+RKQFV+DVLHP RANVSK EL+EKLA +Y + + V VF FRT
Sbjct: 3 AVTIRTRKVISNPLLARKQFVVDVLHPNRANVSKDELREKLAEVYKA-EKDAVSVFGFRT 61
Query: 65 HFGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEK-SRKQMKERKNRAKKIRGVK 123
FGGGKS GFGL+Y+SV AKK+EP YRLVR GL KVEK SR+Q K++KNR KKI G
Sbjct: 62 QFGGGKSVGFGLVYNSVAEAKKFEPTYRLVRYGLAEKVEKASRQQRKQKKNRDKKIFGTG 121
Query: 124 KTKAGDAAK 132
K A A+
Sbjct: 122 KRLAKKVAR 130
>R24B_SCHPO (O59865) 40S ribosomal protein S24-B
Length = 133
Score = 150 bits (380), Expect = 6e-37
Identities = 78/130 (60%), Positives = 97/130 (74%), Gaps = 2/130 (1%)
Query: 4 KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFR 63
+AVTIRTRKFMTNRLL RKQ V+D+LHPG+AN+SK E++EKLA++Y D V F R
Sbjct: 2 EAVTIRTRKFMTNRLLQRKQMVVDILHPGKANLSKNEIREKLAQMYKT-DSECVQAFGLR 60
Query: 64 THFGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEK-SRKQMKERKNRAKKIRGV 122
THFGGG+STGF LIYDS E+ KK+EP YRLVR G ++K +R+Q K+RKNR KK+ G
Sbjct: 61 THFGGGRSTGFALIYDSTESMKKFEPHYRLVRVGQAEPIQKVARQQRKQRKNRGKKVFGT 120
Query: 123 KKTKAGDAAK 132
K A +K
Sbjct: 121 GKRLAKRKSK 130
>R24A_SCHPO (O13784) 40S ribosomal protein S24-A
Length = 133
Score = 146 bits (369), Expect = 1e-35
Identities = 75/130 (57%), Positives = 96/130 (73%), Gaps = 2/130 (1%)
Query: 4 KAVTIRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFR 63
+AVTIRTRKFMTNRLL RKQ V+D+LHPG+AN+SK +L+EKL ++Y D + V F R
Sbjct: 2 EAVTIRTRKFMTNRLLQRKQMVVDILHPGKANISKNDLREKLGQMYKT-DASAVQAFGLR 60
Query: 64 THFGGGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVEK-SRKQMKERKNRAKKIRGV 122
TH+GGG++TGF LIYD VE KK+EP YRLVR G ++K +R+Q K+RKNR KK+ G
Sbjct: 61 THYGGGRTTGFALIYDDVEAMKKFEPHYRLVRVGHAEPIQKVARQQRKQRKNRGKKVFGT 120
Query: 123 KKTKAGDAAK 132
K A +K
Sbjct: 121 GKRLAKRKSK 130
>RS24_PYRFU (Q8U442) 30S ribosomal protein S24e
Length = 99
Score = 66.6 bits (161), Expect = 2e-11
Identities = 34/96 (35%), Positives = 54/96 (55%), Gaps = 1/96 (1%)
Query: 8 IRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTHFG 67
IR ++ N+L+ RK+ ++ HPG S+ ++K KL + D+ +P T + R++FG
Sbjct: 3 IRIKEIKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSYFG 61
Query: 68 GGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVE 103
S G+ YDS E EP+Y L+R+GL K E
Sbjct: 62 SYISKGYAKAYDSKERMLYIEPEYILIRDGLIEKKE 97
>RS24_PYRHO (P58746) 30S ribosomal protein S24e
Length = 99
Score = 61.2 bits (147), Expect = 6e-10
Identities = 31/96 (32%), Positives = 52/96 (53%), Gaps = 1/96 (1%)
Query: 8 IRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTHFG 67
I+ + N+L+ RK+ ++ HPG S+ ++K KL + D+ +P T + R++FG
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSYFG 61
Query: 68 GGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVE 103
KS G+ Y E EP+Y L+R+G+ K E
Sbjct: 62 SYKSKGYAKYYYDKERMLYIEPEYILIRDGIIEKKE 97
>RS24_PYRAB (Q9UY20) 30S ribosomal protein S24e
Length = 99
Score = 60.1 bits (144), Expect = 1e-09
Identities = 30/96 (31%), Positives = 52/96 (53%), Gaps = 1/96 (1%)
Query: 8 IRTRKFMTNRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTHFG 67
I+ + N+L+ RK+ ++ HPG S+ ++K KL + D+ +P T + R++FG
Sbjct: 3 IKITEVKENKLIGRKEIYFEIYHPGEPTPSRKDVKGKLVAMLDL-NPETTVIQYIRSYFG 61
Query: 68 GGKSTGFGLIYDSVENAKKYEPKYRLVRNGLDTKVE 103
KS G+ Y + EP+Y L+R+G+ K E
Sbjct: 62 SYKSKGYAKYYYDKDRMLYIEPEYILIRDGIIEKKE 97
>RS24_PYRAE (Q8ZV65) 30S ribosomal protein S24e
Length = 121
Score = 55.8 bits (133), Expect = 3e-08
Identities = 32/109 (29%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTHFGGGKSTGFG 75
N+LL+R++ +++ +H + ++ ++E +A+ + D + VFV + +T FG G+S
Sbjct: 14 NKLLARRELLVEAVHQNASTPTRQSVREWVAKQLGI-DISNVFVRRIKTEFGRGRSLAEV 72
Query: 76 LIYDSVENAKKYEPKYRLVRN------GLDTKVEKSRKQMKERKNRAKK 118
+Y+ + A+ EP Y L RN L + +K R + +E+K R KK
Sbjct: 73 HVYNDSKIARVIEPLYILARNLGEEGKKLLEEAKKRRNERREKKKRKKK 121
>RS24_AERPE (Q9YCY0) 30S ribosomal protein S24e
Length = 102
Score = 48.1 bits (113), Expect = 6e-06
Identities = 27/82 (32%), Positives = 45/82 (53%), Gaps = 1/82 (1%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTHFGGGKSTGFG 75
N L+ R++ V+ + H + + L++KLA + V D +++ +T +G G S
Sbjct: 12 NPLVKRREIVMILHHELKPTPMRIMLRQKLAEVLGV-DIKRIYIRYIKTGYGAGLSKVRV 70
Query: 76 LIYDSVENAKKYEPKYRLVRNG 97
+YDS E A +EPKY + RNG
Sbjct: 71 HVYDSPERALSFEPKYIIERNG 92
>RS24_METTH (O26367) 30S ribosomal protein S24e
Length = 100
Score = 47.8 bits (112), Expect = 7e-06
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 16 NRLLSRKQFVIDVLHPGRANVSKAELKEKLARIYDVKDPNTVFVFKFRTHFGGGKSTGFG 75
N LL+RK+ + L+ G + E+K KL + D D + + V K FG ++TG+
Sbjct: 11 NPLLNRKEIRFECLYEGESTPKVLEVKNKLVAMLDA-DKDLLVVDKIDQGFGEPRATGYA 69
Query: 76 LIYDSVENAKKYEPKYRLVRN 96
IY+S E + EP++ + +N
Sbjct: 70 KIYESAEKLTEIEPEHVIKKN 90
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.317 0.134 0.367
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,842,819
Number of Sequences: 164201
Number of extensions: 591433
Number of successful extensions: 2725
Number of sequences better than 10.0: 84
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 2639
Number of HSP's gapped (non-prelim): 95
length of query: 137
length of database: 59,974,054
effective HSP length: 98
effective length of query: 39
effective length of database: 43,882,356
effective search space: 1711411884
effective search space used: 1711411884
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC135565.4