BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC126784.4 - phase: 0 /pseudo
(525 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ORP3_MOUSE (Q9DBS9) Oxysterol binding protein-related protein 3 ... 36 0.28
P3K3_DICDI (P54675) Phosphatidylinositol 3-kinase 3 (EC 2.7.1.13... 35 0.62
CYAA_DICDI (Q03100) Adenylate cyclase, aggregation specific (EC ... 33 1.8
POL_SIVA1 (P27973) Pol polyprotein [Contains: Protease (Retropep... 32 3.1
MYBH_DICDI (P34127) Myb-like protein (Fragment) 32 3.1
GUNB_CALSA (P10474) Endoglucanase/exoglucanase B precursor [Incl... 32 3.1
NRG1_HUMAN (Q02297) Pro-neuregulin-1 precursor (Pro-NRG1) [Conta... 32 5.3
BUD8_YEAST (P41698) Bud site selection protein BUD8 32 5.3
PI4K_DICDI (P54677) Phosphatidylinositol 4-kinase (EC 2.7.1.67) ... 31 6.9
FBW8_HUMAN (Q8N3Y1) F-box/WD-repeat protein 8 (F-box and WD-40 d... 31 6.9
YCDR_ECOLI (P75906) Hypothetical lipoprotein ycdR precursor 31 9.0
INGR_HUMAN (P15260) Interferon-gamma receptor alpha chain precur... 31 9.0
AK_AQUAE (O67221) Aspartokinase (EC 2.7.2.4) (Aspartate kinase) 31 9.0
>ORP3_MOUSE (Q9DBS9) Oxysterol binding protein-related protein 3
(OSBP-related protein 3) (ORP-3)
Length = 855
Score = 35.8 bits (81), Expect = 0.28
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 31/116 (26%)
Query: 383 MSDFLGHIEHHISKEMASGDPSFSAERLEYQQMMDGIT-----------QHLLNDNQVTT 431
M + L H+ H + + S S S ER + +Q+M+ T +H L+ + +
Sbjct: 300 MQEDLCHVAHKVYFALRSAFNSISVEREKLKQLMELDTSPSPSAQVVGLKHALS-SALAQ 358
Query: 432 DSDEKSLMSRVNSLRCLLQMDPPAVPNSHDNTGFIEGPNDAKVNIDIKATEENSRD 487
++D K + R+++ LL DPPAVP DN EENSRD
Sbjct: 359 NTDLKERLRRIHAESLLL--DPPAVPKPGDN-----------------LAEENSRD 395
>P3K3_DICDI (P54675) Phosphatidylinositol 3-kinase 3 (EC 2.7.1.137)
(PI3-kinase) (PtdIns-3-kinase) (PI3K) (Fragment)
Length = 1585
Score = 34.7 bits (78), Expect = 0.62
Identities = 40/157 (25%), Positives = 59/157 (37%), Gaps = 7/157 (4%)
Query: 9 NPRSQWESSSATSSISPKFEIEDSIQDQHAPLNKRHKATNDILNEPSPLGLSLRKSPSLL 68
N W SS TSS S Q+ PLN ++ + L KSPS
Sbjct: 282 NKFKSWTSSKPTSS---SIGFASSPQNNGKPLNI--SGSSRFFTSRQDSKIDLLKSPSSS 336
Query: 69 DLIQMTLCQENSVNANTANDNLNSKANKNGRASVEKLKASNFPATHLKIGSWEYKSKYEG 128
Q + EN+ N N N+N N+ N N + +N + Y+
Sbjct: 337 PPTQSDIFNENNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNEELINNNNNNNNDENYKI 396
Query: 129 DLVAKCYFAKQKLVWEVLEGELKSKIEIQWSDISQLK 165
+ + K+ L E LE E + KI + ++I LK
Sbjct: 397 EETEES--LKELLEKEKLENEEREKILKERNEIDNLK 431
>CYAA_DICDI (Q03100) Adenylate cyclase, aggregation specific (EC
4.6.1.1) (ATP pyrophosphate-lyase) (Adenylyl cyclase)
Length = 1407
Score = 33.1 bits (74), Expect = 1.8
Identities = 30/106 (28%), Positives = 48/106 (44%), Gaps = 6/106 (5%)
Query: 7 SKNPRSQWESSSATSSISPKFEIED-SIQDQHAPLNKRHKATNDIL--NEPSPLGLSLRK 63
S N +++ SSS++SS+ + E + + PL +HK + IL NE + SL
Sbjct: 780 SNNNNNEYGSSSSSSSVLGEAVTEQIDCNNTNPPL--QHKKSQSILTNNENDIVSPSLTS 837
Query: 64 SPSLLDLIQMTLCQENSVNANTANDNLNSKANKNGRASVEKLKASN 109
+ +LD N+ N N N N N N N K+K+ +
Sbjct: 838 NSPILDTTVNNNNNNNNTNNNNKNQN-NIYGNNNNNEEDFKIKSKS 882
>POL_SIVA1 (P27973) Pol polyprotein [Contains: Protease
(Retropepsin) (EC 3.4.23.-); Reverse
transcriptase/ribonuclease H (EC 2.7.7.49) (EC 3.1.26.4)
(RT); Integrase (IN)]
Length = 1047
Score = 32.3 bits (72), Expect = 3.1
Identities = 26/85 (30%), Positives = 37/85 (42%), Gaps = 15/85 (17%)
Query: 61 LRKSPSLLDLIQMTL-----CQENSVNANTANDNLNSKANKNGRASVEKLKASNFPATHL 115
LR +LLD+++ T +EN T + K RA+V+KL
Sbjct: 474 LRGKKNLLDVVEWTPEAEAEYEENKEILKTEQEGTYYAPEKPLRAAVQKLGD-------- 525
Query: 116 KIGSWEYKSKYEGDLVAKCYFAKQK 140
G W Y+ K EG ++ FAKQK
Sbjct: 526 --GQWSYQFKQEGKILKVGKFAKQK 548
>MYBH_DICDI (P34127) Myb-like protein (Fragment)
Length = 451
Score = 32.3 bits (72), Expect = 3.1
Identities = 27/131 (20%), Positives = 58/131 (43%), Gaps = 10/131 (7%)
Query: 28 EIEDSIQDQHAPLNKRHKATNDILNEPSPLGLSLRKSPSLLDLIQMTLCQ-ENSVNANTA 86
E ED D + N+ + + +N+ S + + +L++ I + N++N N
Sbjct: 65 EEEDDDDDDDSQQNRHNISIPFTINKNS-----INNNNNLINNINNNINNMNNNMNNNNN 119
Query: 87 NDNLNSKANKNGRASVEKLKASNFPATHLKIGSWEYKSKYEGDLVAKCYFAKQKLVWEVL 146
N+N+N+ N NG +++ +N P K ++ S+ + L+ QK W+ +
Sbjct: 120 NNNMNNNINNNGNSNISN---NNTPKVEKKKTKGKWTSEEDQILIKAVNLHNQK-NWKKI 175
Query: 147 EGELKSKIEIQ 157
+ ++Q
Sbjct: 176 AEHFPDRTDVQ 186
>GUNB_CALSA (P10474) Endoglucanase/exoglucanase B precursor
[Includes: Endoglucanase (EC 3.2.1.4)
(Endo-1,4-beta-glucanase) (Cellulase)
(Cellobiohydrolase); Exoglucanase (EC 3.2.1.91)
(Exocellobiohydrolase) (1,4-beta-cellobiohydrolase)]
Length = 1039
Score = 32.3 bits (72), Expect = 3.1
Identities = 21/98 (21%), Positives = 44/98 (44%), Gaps = 3/98 (3%)
Query: 429 VTTDSDEKSLMSRVNSLRCLLQMDPPAVPNSHDNTGFIEGPNDAKVNIDIKATEE---NS 485
++ D+D++ ++ NS+ +M P ++ +TG + A +D +T +
Sbjct: 64 LSNDTDKRMVLKHFNSITAENEMKPESLLAGQTSTGLSYRFSTADAFVDFASTNKIGIRG 123
Query: 486 RDVYGGNPAPGMSRKDSFGDLLLSLPRIASLPKFLFDI 523
+ N P KDS G L +A L ++++D+
Sbjct: 124 HTLVWHNQTPDWFFKDSNGQRLSKDALLARLKQYIYDV 161
>NRG1_HUMAN (Q02297) Pro-neuregulin-1 precursor (Pro-NRG1)
[Contains: Neuregulin-1 (Neu differentiation factor)
(Heregulin) (HRG) (Breast cancer cell differentiation
factor p45) (Acetylcholine receptor inducing activity)
(ARIA) (Sensory and motor neuron-d
Length = 639
Score = 31.6 bits (70), Expect = 5.3
Identities = 20/72 (27%), Positives = 32/72 (43%), Gaps = 1/72 (1%)
Query: 235 QCNDRLKFLSQQPEIMVDSPHFDPRSAAIENPHNLKDCDLHQGNGSAVSCFQNMGSPHSS 294
+CN L+ + P+ DSPH + +A+ P + D H + S S M P SS
Sbjct: 399 ECNSFLRHARETPDSYRDSPHSERYVSAMTTPARMSPVDFHTPS-SPKSPPSEMSPPVSS 457
Query: 295 LSPSFTTEHSDP 306
++ S + P
Sbjct: 458 MTVSMPSMAVSP 469
>BUD8_YEAST (P41698) Bud site selection protein BUD8
Length = 603
Score = 31.6 bits (70), Expect = 5.3
Identities = 37/133 (27%), Positives = 59/133 (43%), Gaps = 31/133 (23%)
Query: 7 SKNPRSQWESSSATSSISPKFEIEDSIQDQHAPLNKR----HK------------ATNDI 50
+KN S S+T S + E ED + DQ+ P+N+ HK +T+D
Sbjct: 238 TKNKTSNVNFISSTGS-KGEGETEDEVIDQYEPVNESKFIPHKLKIPEKAGSIKSSTSDD 296
Query: 51 LNEPSPLGLSLRK-----SPSLLDLIQMTLCQENSVNANTANDNLNSKANKNGRASVEKL 105
+ P G S RK SPSL+ I + +S N ++ D++ G + EK
Sbjct: 297 SHSPGAPGTSARKIKIPQSPSLIGNILIPSHNSDSSNESSPKDHI-------GHNNEEKF 349
Query: 106 --KASNFPATHLK 116
K++ P+T L+
Sbjct: 350 SSKSTRKPSTSLE 362
>PI4K_DICDI (P54677) Phosphatidylinositol 4-kinase (EC 2.7.1.67)
(PI4-kinase) (PtdIns-4-kinase) (PI4K-alpha)
Length = 1093
Score = 31.2 bits (69), Expect = 6.9
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 15/103 (14%)
Query: 21 SSISPKFEIEDSIQDQHAPLNKRHKATNDILNEPSPLGLSLR---KSPSLLDLIQMTLCQ 77
+ I P ++SI D++ + N+I E + + + + KS S ++ + TLC+
Sbjct: 206 NEILPNENSDNSINDENNQYGNSNN-NNNISGENNNIKIDINSQNKSDSNIETLNSTLCE 264
Query: 78 E-----------NSVNANTANDNLNSKANKNGRASVEKLKASN 109
E N+ N N N+N N+ N N + + +N
Sbjct: 265 ETKTSPIKDDMENNNNNNNNNNNNNNNNNNNNNINNNNINNNN 307
>FBW8_HUMAN (Q8N3Y1) F-box/WD-repeat protein 8 (F-box and WD-40
domain protein 8) (F-box only protein 29)
Length = 598
Score = 31.2 bits (69), Expect = 6.9
Identities = 24/98 (24%), Positives = 41/98 (41%), Gaps = 11/98 (11%)
Query: 81 VNANTANDNLNSKANKNGRASVEKLKASNFP---------ATHLKIGSWEYKSKYEGDLV 131
VN + + NL N +GR + L++ N + +++ W+ S E LV
Sbjct: 438 VNLSDSPPNLMVSGNMDGRVRIHDLRSGNIALSLSAHQLRVSAVQMDDWKIVSGGEEGLV 497
Query: 132 AKCYFAKQKLVWEVLEGELKSKIEIQWSDISQLKANCP 169
+ + + +WEV G I +S S + AN P
Sbjct: 498 SVWDYRMNQKLWEVYSGHPVQ--HISFSSHSLITANVP 533
>YCDR_ECOLI (P75906) Hypothetical lipoprotein ycdR precursor
Length = 672
Score = 30.8 bits (68), Expect = 9.0
Identities = 20/68 (29%), Positives = 32/68 (46%), Gaps = 5/68 (7%)
Query: 105 LKASNFPATHLKIGSW-----EYKSKYEGDLVAKCYFAKQKLVWEVLEGELKSKIEIQWS 159
L+A +PA +GSW + + K+ +LV + YFA + V EV L W+
Sbjct: 128 LQAFQWPAVWAPVGSWVDTPADKQVKFGDELVDREYFATWQQVREVARSRLVELASHTWN 187
Query: 160 DISQLKAN 167
++AN
Sbjct: 188 SHYGIQAN 195
>INGR_HUMAN (P15260) Interferon-gamma receptor alpha chain precursor
(IFN-gamma-R1) (CD119 antigen) (CDw119)
Length = 489
Score = 30.8 bits (68), Expect = 9.0
Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 447 CLLQMDPPAVPNSH--DNTGFIEGPNDAKVNIDIKATEENSRDVYGGNPAPGMSRKDS 502
C + P VP H DN G +E + ++ TEEN DV G+ + R+ S
Sbjct: 322 CEEPLSPATVPGMHTEDNPGKVEHTEELSSITEVVTTEENIPDVVPGSHLTPIERESS 379
>AK_AQUAE (O67221) Aspartokinase (EC 2.7.2.4) (Aspartate kinase)
Length = 415
Score = 30.8 bits (68), Expect = 9.0
Identities = 19/74 (25%), Positives = 40/74 (53%), Gaps = 1/74 (1%)
Query: 85 TANDNLNSKANKNGRASVEK-LKASNFPATHLKIGSWEYKSKYEGDLVAKCYFAKQKLVW 143
TA+ + A K + S E+ L+ ++ A ++I S E+ +KY + + F++++ W
Sbjct: 179 TADPRIVPNAKKIKKISYEEMLELASLGAKVMQIRSVEFAAKYNVRIHVRSTFSEEEGTW 238
Query: 144 EVLEGELKSKIEIQ 157
V E E+ K+ ++
Sbjct: 239 IVPEDEVMEKVAVR 252
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.322 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,146,990
Number of Sequences: 164201
Number of extensions: 2629947
Number of successful extensions: 6291
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 6262
Number of HSP's gapped (non-prelim): 24
length of query: 525
length of database: 59,974,054
effective HSP length: 115
effective length of query: 410
effective length of database: 41,090,939
effective search space: 16847284990
effective search space used: 16847284990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC126784.4