Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC125476.12 - phase: 0 /pseudo
         (320 letters)

Database: sprot 
           164,201 sequences; 59,974,054 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

YKI3_YEAST (P36079) Hypothetical 23.7 kDa protein in MDH1-VMA5 i...    35  0.33
YIK0_YEAST (P40490) Hypothetical 13.5 kDa protein in MOB1-SGA1 i...    33  0.95
KC1_EIMTE (Q6QNL9) Casein kinase I (EC 2.7.1.-)                        31  3.6

>YKI3_YEAST (P36079) Hypothetical 23.7 kDa protein in MDH1-VMA5
          intergenic region
          Length = 204

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 12/21 (57%), Positives = 18/21 (85%)

Query: 75 LLKMIYIYIYIYIYIYIYIYI 95
          + + IYIY+Y+YIY++ YIYI
Sbjct: 5  IYRYIYIYMYLYIYVHTYIYI 25



 Score = 33.5 bits (75), Expect = 0.73
 Identities = 12/16 (75%), Positives = 15/16 (93%)

Query: 80 YIYIYIYIYIYIYIYI 95
          YIY YIYIY+Y+YIY+
Sbjct: 4  YIYRYIYIYMYLYIYV 19



 Score = 32.3 bits (72), Expect = 1.6
 Identities = 11/16 (68%), Positives = 15/16 (93%)

Query: 79 IYIYIYIYIYIYIYIY 94
          IY+Y+YIY++ YIYIY
Sbjct: 11 IYMYLYIYVHTYIYIY 26


>YIK0_YEAST (P40490) Hypothetical 13.5 kDa protein in MOB1-SGA1
           intergenic region
          Length = 117

 Score = 33.1 bits (74), Expect = 0.95
 Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 4/38 (10%)

Query: 79  IYIYIYIYIYIYIYIYIERERERER----GREGESKGR 112
           IYIYIY+Y+ +YI + I R    E+     ++ E KGR
Sbjct: 33  IYIYIYVYVNVYIQLVISRAEWAEKHSIVEKKREEKGR 70



 Score = 32.7 bits (73), Expect = 1.2
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 79  IYIYIYIYIYIYIYIYIERERERERGREGES 109
           IY +IYIYIY+Y+ +YI+    R    E  S
Sbjct: 29  IYAHIYIYIYVYVNVYIQLVISRAEWAEKHS 59



 Score = 30.0 bits (66), Expect = 8.0
 Identities = 10/16 (62%), Positives = 14/16 (87%)

Query: 80 YIYIYIYIYIYIYIYI 95
          YIY +IYIYIY+Y+ +
Sbjct: 28 YIYAHIYIYIYVYVNV 43



 Score = 30.0 bits (66), Expect = 8.0
 Identities = 11/17 (64%), Positives = 14/17 (81%)

Query: 79 IYIYIYIYIYIYIYIYI 95
          I  YIY +IYIYIY+Y+
Sbjct: 25 ICTYIYAHIYIYIYVYV 41


>KC1_EIMTE (Q6QNL9) Casein kinase I (EC 2.7.1.-)
          Length = 335

 Score = 31.2 bits (69), Expect = 3.6
 Identities = 14/37 (37%), Positives = 23/37 (61%), Gaps = 1/37 (2%)

Query: 82  YIYIYIYIYIYIYIERERERERGREGESKGRMQGQMW 118
           Y Y +I+ + +++ ERERER+R R   ++G   G  W
Sbjct: 282 YQYDFIFDWTFLHAERERERQR-RSMVNQGAESGNQW 317


  Database: sprot
    Posted date:  Nov 25, 2004 10:54 AM
  Number of letters in database: 59,974,054
  Number of sequences in database:  164,201
  
Lambda     K      H
   0.361    0.162    0.622 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,519,958
Number of Sequences: 164201
Number of extensions: 1050051
Number of successful extensions: 4328
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 4300
Number of HSP's gapped (non-prelim): 13
length of query: 320
length of database: 59,974,054
effective HSP length: 110
effective length of query: 210
effective length of database: 41,911,944
effective search space: 8801508240
effective search space used: 8801508240
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.9 bits)
S2: 66 (30.0 bits)


Medicago: description of AC125476.12