BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124964.9 - phase: 0
(108 letters)
Database: sprot
164,201 sequences; 59,974,054 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
HXB2_HUMAN (P14652) Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8) 44 5e-05
ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger prote... 42 2e-04
ATX7_MOUSE (Q8R4I1) Ataxin-7 (Spinocerebellar ataxia type 7 prot... 37 0.008
POL2_TORVR (P25247) RNA2 polyprotein (P2) [Contains: X3 protein;... 37 0.011
MAZ_MOUSE (P56671) Myc-associated zinc finger protein (MAZI) (Pu... 36 0.018
MAZ_MESAU (P56670) Myc-associated zinc finger protein (MAZI) (Pu... 36 0.018
MAZ_HUMAN (P56270) Myc-associated zinc finger protein (MAZI) (Pu... 35 0.031
BNI1_YEAST (P41832) BNI1 protein (Synthetic lethal 39) 35 0.031
PCL_DROME (Q24459) Polycomb protein Pcl (Polycomblike protein) 34 0.054
MYS3_HUMAN (Q92794) MYST histone acetyltransferase 3 (Runt-relat... 34 0.054
EXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precur... 34 0.054
FUTS_DROME (Q9W596) Microtubule-associated protein futsch 34 0.070
ERF_HUMAN (P50548) ETS-domain transcription factor ERF (Ets2 rep... 34 0.070
PCLO_RAT (Q9JKS6) Piccolo protein (Multidomain presynaptic cytom... 33 0.091
IF2_SYNY3 (P72689) Translation initiation factor IF-2 33 0.091
HXB4_HUMAN (P17483) Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6) 33 0.091
VINC_CAEEL (P19826) Vinculin (P107B) 33 0.12
TUL4_MOUSE (Q9JIL5) Tubby-like protein 4 (Tubby superfamily prot... 33 0.12
TRDN_HUMAN (Q13061) Triadin 33 0.12
TONB_PSEPU (Q05613) TonB protein 33 0.12
>HXB2_HUMAN (P14652) Homeobox protein Hox-B2 (Hox-2H) (Hox-2.8) (K8)
Length = 356
Score = 44.3 bits (103), Expect = 5e-05
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 13/64 (20%)
Query: 45 PPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVVAAP 104
PPPPP E+ P+L + + + +K A E G A+ PPPPPP+ AAP
Sbjct: 44 PPPPPFEQTFPSLQPGASTLQRPRSQKRA---------EDGPAL----PPPPPPPLPAAP 90
Query: 105 PASE 108
PA E
Sbjct: 91 PAPE 94
>ZIC5_HUMAN (Q96T25) Zinc finger protein ZIC 5 (Zinc finger protein
of the cerebellum 5)
Length = 639
Score = 42.4 bits (98), Expect = 2e-04
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 19/119 (15%)
Query: 4 DALVGVVINLARRALMGFSGAVVLGLSWSDEQSARAAARRP----------PPPPPK--- 50
DA G V A AL G+ GAV L L+ + +A AA P PPPPP
Sbjct: 286 DAHYGAVAAAAAAALHGY-GAVNLNLNLAAAAAAAAAGPGPHLQHHAPPPAPPPPPAPAQ 344
Query: 51 --EKKDPNLSAAQAKVLASKKRKEAMKAE-VARLREQGKAVNINKEPPPPPPVVAAPPA 106
+ P+L A L + ++ +K E + + + + + PPPPPP PPA
Sbjct: 345 HPHQHHPHLPGAAGAFL--RYMRQPIKQELICKWIDPDELAGLPPPPPPPPPPPPPPPA 401
>ATX7_MOUSE (Q8R4I1) Ataxin-7 (Spinocerebellar ataxia type 7 protein
homolog)
Length = 867
Score = 37.0 bits (84), Expect = 0.008
Identities = 25/80 (31%), Positives = 36/80 (44%), Gaps = 5/80 (6%)
Query: 33 DEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKE--AMKAEVARLREQGKAVNI 90
D Q R P P PP+ ++P L A LASK + + ++ +QG + I
Sbjct: 388 DSQQVPHPLRDPHPTPPRTPQEPQLPAESKPFLASKPKPQTPSLPRPPGCPAQQGGSTPI 447
Query: 91 NKEP---PPPPPVVAAPPAS 107
+ P P PP+ A PAS
Sbjct: 448 DPPPGQESPHPPLPATEPAS 467
>POL2_TORVR (P25247) RNA2 polyprotein (P2) [Contains: X3 protein; X4
protein; Movement protein (MP); Coat protein (CP)]
Length = 1882
Score = 36.6 bits (83), Expect = 0.011
Identities = 23/64 (35%), Positives = 34/64 (52%), Gaps = 9/64 (14%)
Query: 38 RAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKA--EVARLREQGKAVNINKEPP 95
R A PPPPPP + AA+A++ + + +KA +R+R A+N + PP
Sbjct: 223 RDVAALPPPPPPSAAR----LAAEAELASKAESLRRLKAFKTFSRVRP---ALNTSFPPP 275
Query: 96 PPPP 99
PPPP
Sbjct: 276 PPPP 279
>MAZ_MOUSE (P56671) Myc-associated zinc finger protein (MAZI)
(Purine-binding transcription factor) (Pur-1)
Length = 477
Score = 35.8 bits (81), Expect = 0.018
Identities = 28/86 (32%), Positives = 34/86 (38%), Gaps = 14/86 (16%)
Query: 35 QSARAAARRPPPPPPKEKKDPN-------LSAAQAKVLASKKRKEAMKAEVARLREQGKA 87
QS AA PPP P +P L+AAQ A+ A A V A
Sbjct: 60 QSPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVVTAPPAPAAA 119
Query: 88 VNINKE-------PPPPPPVVAAPPA 106
++ PPPPPP V+AP A
Sbjct: 120 STVDTAALKQPPAPPPPPPAVSAPAA 145
>MAZ_MESAU (P56670) Myc-associated zinc finger protein (MAZI)
(Purine-binding transcription factor) (Pur-1) (Fragment)
Length = 331
Score = 35.8 bits (81), Expect = 0.018
Identities = 28/86 (32%), Positives = 34/86 (38%), Gaps = 14/86 (16%)
Query: 35 QSARAAARRPPPPPPKEKKDPN-------LSAAQAKVLASKKRKEAMKAEVARLREQGKA 87
QS AA PPP P +P L+AAQ A+ A A V A
Sbjct: 47 QSPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVVTAPPAPAAA 106
Query: 88 VNINKE-------PPPPPPVVAAPPA 106
++ PPPPPP V+AP A
Sbjct: 107 STVDTAALKQPPAPPPPPPAVSAPAA 132
>MAZ_HUMAN (P56270) Myc-associated zinc finger protein (MAZI)
(Purine-binding transcription factor) (Pur-1) (ZF87)
(ZIF87)
Length = 477
Score = 35.0 bits (79), Expect = 0.031
Identities = 28/86 (32%), Positives = 34/86 (38%), Gaps = 14/86 (16%)
Query: 35 QSARAAARRPPPPPPKEKKDPN-------LSAAQAKVLASKKRKEAMKAEVARLREQGKA 87
QS AA PPP P +P L+AAQ A+ A A A A
Sbjct: 60 QSPFQAAPAPPPTPQAPAAEPLQVDLLPVLAAAQESAAAAAAAAAAAAAVAAAPPAPAAA 119
Query: 88 VNINKE-------PPPPPPVVAAPPA 106
++ PPPPPP V+AP A
Sbjct: 120 STVDTAALKQPPAPPPPPPPVSAPAA 145
>BNI1_YEAST (P41832) BNI1 protein (Synthetic lethal 39)
Length = 1953
Score = 35.0 bits (79), Expect = 0.031
Identities = 30/108 (27%), Positives = 44/108 (39%), Gaps = 14/108 (12%)
Query: 2 VDDALVGVVINLARRALMGFSGAVVL----GLSWSDEQSARAAARRPPPPPPKEKKDPNL 57
V++ G V+N FS L G QS+ +++ PPPPPP
Sbjct: 1194 VENGKQGRVVNHEEDKTADFSAVSKLNNTDGAEDLSTQSSVLSSQPPPPPPPPPP----- 1248
Query: 58 SAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVVAAPP 105
AK+ KE K+E ++++ + PPPPPP PP
Sbjct: 1249 --VPAKLFGESLEKEK-KSEDDTVKQE--TTGDSPAPPPPPPPPPPPP 1291
>PCL_DROME (Q24459) Polycomb protein Pcl (Polycomblike protein)
Length = 1043
Score = 34.3 bits (77), Expect = 0.054
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 22 SGAVVLGLSWSDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARL 81
S AVV+ DE + + PP P+ P S+ +LA++ + + +
Sbjct: 262 SAAVVI----VDEPDSTTTTPQTPPTTPEAMSSPGKSSPSPPLLATQSLLKGVNSMKPSF 317
Query: 82 REQGKAVNINKEPPPPPPVVAAPPAS 107
+ A PP PPP APP +
Sbjct: 318 KTVEAAPPTPPTPPSPPPPPPAPPVA 343
>MYS3_HUMAN (Q92794) MYST histone acetyltransferase 3 (Runt-related
transcription factor binding protein 2) (Monocytic
leukemia zinc finger protein) (Zinc finger protein 220)
Length = 2004
Score = 34.3 bits (77), Expect = 0.054
Identities = 18/67 (26%), Positives = 32/67 (46%), Gaps = 11/67 (16%)
Query: 42 RRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVV 101
++PPPPPP++ + P + + A + + + Q + ++PPPPPP
Sbjct: 1649 QQPPPPPPQQPQPP-----------PPQPQPAPQPPPPQQQPQQQPQPQPQQPPPPPPPQ 1697
Query: 102 AAPPASE 108
PP S+
Sbjct: 1698 QQPPLSQ 1704
>EXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor
(PELP)
Length = 426
Score = 34.3 bits (77), Expect = 0.054
Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 5/67 (7%)
Query: 43 RPPPPPPKEKKD--PNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPV 100
+PPPPPP K P+ SA Q K+ + + + K+PPPPPP
Sbjct: 147 KPPPPPPSPCKPSPPDQSAKQPPQPPPAKQPSPPPPPPP---VKAPSPSPAKQPPPPPPP 203
Query: 101 VAAPPAS 107
V AP S
Sbjct: 204 VKAPSPS 210
Score = 30.8 bits (68), Expect = 0.59
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 16/65 (24%)
Query: 41 ARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPV 100
A++PPPPPP K A Q A K+ + PPPP
Sbjct: 194 AKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLL----------------PPPPP 237
Query: 101 VAAPP 105
VA PP
Sbjct: 238 VAYPP 242
Score = 27.3 bits (59), Expect = 6.5
Identities = 19/67 (28%), Positives = 24/67 (35%), Gaps = 4/67 (5%)
Query: 43 RPPPPPPKEKKDPNL----SAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPP 98
+ PPPPP+ KK P L A V+ A +A + P PP
Sbjct: 218 KQPPPPPRAKKSPLLPPPPPVAYPPVMTPSPSPAAEPPIIAPFPSPPANPPLIPRRPAPP 277
Query: 99 PVVAAPP 105
V PP
Sbjct: 278 VVKPLPP 284
>FUTS_DROME (Q9W596) Microtubule-associated protein futsch
Length = 5412
Score = 33.9 bits (76), Expect = 0.070
Identities = 22/65 (33%), Positives = 31/65 (46%), Gaps = 3/65 (4%)
Query: 32 SDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNIN 91
S E+S R +A P P KE P A K A K ++E+ + +A E GKA +I
Sbjct: 2262 SKEESRRESAAEKSPLPSKEASRPASVAESVKDEADKSKEESRRESMA---ESGKAQSIK 2318
Query: 92 KEPPP 96
+ P
Sbjct: 2319 GDQSP 2323
Score = 28.9 bits (63), Expect = 2.3
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 13/76 (17%)
Query: 32 SDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNIN 91
S E+S R + P P KE P A K A K ++E+ + VA
Sbjct: 2114 SKEESRRESVAEKSPLPSKEASRPASVAESIKDEAEKSKEESRRESVA------------ 2161
Query: 92 KEPPPPPPVVAAPPAS 107
E P P A+ PAS
Sbjct: 2162 -EKSPLPSKEASRPAS 2176
Score = 28.9 bits (63), Expect = 2.3
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 32 SDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVA 79
S E+S R + P P KE P A K A K ++E+ + VA
Sbjct: 3890 SKEESRRESVTEKSPLPSKEASRPTSVAESVKDEAEKSKEESRRESVA 3937
Score = 28.9 bits (63), Expect = 2.3
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 13/76 (17%)
Query: 32 SDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNIN 91
S E+S R + P P KE P A K A K ++E+ + VA
Sbjct: 2040 SKEESRRESVAEKSPLPSKEASRPASVAESIKDEAEKSKEESRRESVA------------ 2087
Query: 92 KEPPPPPPVVAAPPAS 107
E P P A+ PAS
Sbjct: 2088 -EKSPLPSKEASRPAS 2102
Score = 28.9 bits (63), Expect = 2.3
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 32 SDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVA 79
S E+S R + P P KE P A K A K ++E+ + VA
Sbjct: 3705 SKEESRRESVAEKSPLPSKEASRPTSVAESVKDEAEKSKEESRRESVA 3752
Score = 28.9 bits (63), Expect = 2.3
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 13/76 (17%)
Query: 32 SDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNIN 91
S E+S R + P P KE P A K A K ++E+ + VA
Sbjct: 2077 SKEESRRESVAEKSPLPSKEASRPASVAESIKDEAEKSKEESRRESVA------------ 2124
Query: 92 KEPPPPPPVVAAPPAS 107
E P P A+ PAS
Sbjct: 2125 -EKSPLPSKEASRPAS 2139
Score = 28.9 bits (63), Expect = 2.3
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 13/76 (17%)
Query: 32 SDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNIN 91
S E+S R + P P KE P A K A K ++E+ + VA
Sbjct: 2003 SKEESRRESVAEKSPLPSKEASRPASVAESIKDEAEKSKEESRRESVA------------ 2050
Query: 92 KEPPPPPPVVAAPPAS 107
E P P A+ PAS
Sbjct: 2051 -EKSPLPSKEASRPAS 2065
Score = 28.9 bits (63), Expect = 2.3
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 13/76 (17%)
Query: 32 SDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNIN 91
S E+S R + P P KE P A K A K ++E+ + VA
Sbjct: 1966 SKEESRRESVAEKSPLPSKEASRPASVAESIKDEAEKSKEESRRESVA------------ 2013
Query: 92 KEPPPPPPVVAAPPAS 107
E P P A+ PAS
Sbjct: 2014 -EKSPLPSKEASRPAS 2028
Score = 28.9 bits (63), Expect = 2.3
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 13/76 (17%)
Query: 32 SDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNIN 91
S E+S R + P P KE P A K A K ++E+ + VA
Sbjct: 2151 SKEESRRESVAEKSPLPSKEASRPASVAESIKDEAEKSKEESRRESVA------------ 2198
Query: 92 KEPPPPPPVVAAPPAS 107
E P P A+ PAS
Sbjct: 2199 -EKSPLPSKEASRPAS 2213
Score = 28.5 bits (62), Expect = 2.9
Identities = 16/48 (33%), Positives = 22/48 (45%)
Query: 32 SDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVA 79
S E+S R + P P KE P A K A K ++E+ + VA
Sbjct: 3446 SKEESRRESVAEKSPLPSKEASRPTSVAESVKDEAEKSKEESRRDSVA 3493
Score = 28.5 bits (62), Expect = 2.9
Identities = 23/76 (30%), Positives = 29/76 (37%), Gaps = 13/76 (17%)
Query: 32 SDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNIN 91
S E+S R + P P KE P A K A K ++E + VA
Sbjct: 2188 SKEESRRESVAEKSPLPSKEASRPASVAESIKDEAEKSKEETRRESVA------------ 2235
Query: 92 KEPPPPPPVVAAPPAS 107
E P P A+ PAS
Sbjct: 2236 -EKSPLPSKEASRPAS 2250
>ERF_HUMAN (P50548) ETS-domain transcription factor ERF (Ets2
repressor factor)
Length = 548
Score = 33.9 bits (76), Expect = 0.070
Identities = 28/108 (25%), Positives = 42/108 (37%), Gaps = 11/108 (10%)
Query: 12 NLARRALMGFSGAVVLGLSWSDEQSARAAARRPPPPPPKEKKDPNLSAAQAKV------L 65
+L+ RA + + G VV D+ A PP P + S++ K L
Sbjct: 325 HLSPRAFLHYPGLVVPQPQRPDKCPLPPMAPETPPVPSSASSSSSSSSSPFKFKLQPPPL 384
Query: 66 ASKKRKEAMKAEVARLREQGKAVNINK-----EPPPPPPVVAAPPASE 108
++R KA + G A + + PPPPPP + P SE
Sbjct: 385 GRRQRAAGEKAVAGADKSGGSAGGLAEGAGALAPPPPPPQIKVEPISE 432
Score = 30.4 bits (67), Expect = 0.77
Identities = 18/60 (30%), Positives = 24/60 (40%), Gaps = 8/60 (13%)
Query: 39 AAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPP 98
A A PPPPPP+ K +P +V + E E G+ + PP PP
Sbjct: 413 AGALAPPPPPPQIKVEPISEGESEEVEVTDISDED--------EEDGEVFKTPRAPPAPP 464
>PCLO_RAT (Q9JKS6) Piccolo protein (Multidomain presynaptic
cytomatrix protein)
Length = 5085
Score = 33.5 bits (75), Expect = 0.091
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Query: 35 QSARAAARRPPPPPPKE-------KKDPNLSAAQAKVLASKKRKEAMKAE--VARLREQG 85
Q+ AA + P P + K L A AK A KK +A AE ++ +
Sbjct: 908 QTGPAAPSKQAPTPSQSPAAQGPAKSTGQLPPAPAKATAVKKEAKAAAAENLESKPEQAP 967
Query: 86 KAVNINKEPPPPPPVVAAPPASE 108
A K+ PPP V PP SE
Sbjct: 968 TAKKTEKDKKPPPAKVGKPPPSE 990
>IF2_SYNY3 (P72689) Translation initiation factor IF-2
Length = 1001
Score = 33.5 bits (75), Expect = 0.091
Identities = 25/89 (28%), Positives = 39/89 (43%), Gaps = 15/89 (16%)
Query: 26 VLGLSWSDEQSARAAARRPPPPP------PKEKKDPNLSAAQAKVLASKKRKEAMKAEVA 79
+L + E+S + RP PPP PK P A+A +K++E +
Sbjct: 83 ILAIHHKQEKSGGPSPARPTPPPRPKLQAPKAPTPPQPPVAKASAPKIQKQEEPAQ---- 138
Query: 80 RLREQGKAVNINKEP--PPPPPVVAAPPA 106
E K+V +P PPP P + +PP+
Sbjct: 139 ---EAPKSVAPPTQPLAPPPVPSLQSPPS 164
Score = 28.5 bits (62), Expect = 2.9
Identities = 23/86 (26%), Positives = 35/86 (39%), Gaps = 19/86 (22%)
Query: 29 LSWSDEQSARAAARRPPPPPPK--------EKKDPNLSAAQAKVLASKKRKEAMKAEVAR 80
+S SD + +AAA + P PK E K+ Q K+LA +
Sbjct: 40 ISESDAERIKAAAEKFTPQQPKKPRVASRPESKEDKSDPKQQKILA-----------IHH 88
Query: 81 LREQGKAVNINKEPPPPPPVVAAPPA 106
+E+ + + PPP P + AP A
Sbjct: 89 KQEKSGGPSPARPTPPPRPKLQAPKA 114
>HXB4_HUMAN (P17483) Homeobox protein Hox-B4 (Hox-2F) (Hox-2.6)
Length = 251
Score = 33.5 bits (75), Expect = 0.091
Identities = 21/61 (34%), Positives = 22/61 (35%), Gaps = 10/61 (16%)
Query: 44 PPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVVAA 103
PPPPPP P LS R A A L E G+ PPPPP
Sbjct: 76 PPPPPPPPPPPPGLS----------PRAPAPPPAGALLPEPGQRCEAVSSSPPPPPCAQN 125
Query: 104 P 104
P
Sbjct: 126 P 126
>VINC_CAEEL (P19826) Vinculin (P107B)
Length = 1010
Score = 33.1 bits (74), Expect = 0.12
Identities = 29/104 (27%), Positives = 42/104 (39%), Gaps = 28/104 (26%)
Query: 2 VDDALVGVVINLARRALMGFSGAVVLGLSWSDEQSARAAARRPPPPPPKEKKDPNLSAAQ 61
V DA+ GV ++ R S E +RA+ PPPP + + N S
Sbjct: 725 VGDAITGVPMSNGRH-------------SSYQESISRASPYNPPPPSSQVIRSVNASPPT 771
Query: 62 AKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVVAAPP 105
A ++ +K +RE +I P PPPPV +PP
Sbjct: 772 APIIHNK----------MIIRE-----DIPAPPRPPPPVELSPP 800
>TUL4_MOUSE (Q9JIL5) Tubby-like protein 4 (Tubby superfamily
protein)
Length = 1547
Score = 33.1 bits (74), Expect = 0.12
Identities = 26/80 (32%), Positives = 34/80 (42%), Gaps = 18/80 (22%)
Query: 44 PPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKA--EVARLREQGKA--------VNINKE 93
PPPPPP + LSA + +++ KA V +L +G A V + K
Sbjct: 776 PPPPPPPPQAPMQLSAVDHGDRDHEHLQKSAKALRPVPQLAAEGDAVVFSAPQEVQVAKM 835
Query: 94 PPPPP--------PVVAAPP 105
PPPP P AAPP
Sbjct: 836 NPPPPYPGTIPAAPTTAAPP 855
>TRDN_HUMAN (Q13061) Triadin
Length = 728
Score = 33.1 bits (74), Expect = 0.12
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 40 AARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPP 95
A+R P P E+K+ A+ KV + K+KE K ++ + E+ A+++ K+ P
Sbjct: 298 ASRPTPASPALEEKEGEKKKAEKKVTSETKKKE--KEDIKKKSEKETAIDVEKKEP 351
>TONB_PSEPU (Q05613) TonB protein
Length = 243
Score = 33.1 bits (74), Expect = 0.12
Identities = 33/106 (31%), Positives = 43/106 (40%), Gaps = 25/106 (23%)
Query: 24 AVVLGLSWSDEQSAR----------AAARRP-PPPPPKEKKDPNLSAAQAKVLASKKRKE 72
AV+L L+WS Q+ A P PPPPPK P A + L K E
Sbjct: 25 AVLLTLNWSVPQAIELPPAAMMVELAPLPEPAPPPPPKAAPQP---PAPVEELPLPKLVE 81
Query: 73 AMKAEVARLR-----------EQGKAVNINKEPPPPPPVVAAPPAS 107
A K ++A + + K KE PP VV APP++
Sbjct: 82 APKPKIAIAKPPKPKAKPQPPKPEKKPEPPKEAPPTEEVVDAPPSN 127
Database: sprot
Posted date: Nov 25, 2004 10:54 AM
Number of letters in database: 59,974,054
Number of sequences in database: 164,201
Lambda K H
0.311 0.128 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,638,476
Number of Sequences: 164201
Number of extensions: 563757
Number of successful extensions: 9876
Number of sequences better than 10.0: 405
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 236
Number of HSP's that attempted gapping in prelim test: 7647
Number of HSP's gapped (non-prelim): 1559
length of query: 108
length of database: 59,974,054
effective HSP length: 84
effective length of query: 24
effective length of database: 46,181,170
effective search space: 1108348080
effective search space used: 1108348080
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC124964.9