BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC149206.8 - phase: 0
(127 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB10175.1| hypothetical protein [Arabidopsis thaliana] gi|7... 61 5e-09
emb|CAB80774.1| hypothetical protein [Arabidopsis thaliana] gi|3... 58 5e-08
gb|AAM61661.1| unknown [Arabidopsis thaliana] 58 5e-08
ref|NP_567152.1| F-box family protein [Arabidopsis thaliana] 58 5e-08
emb|CAB86926.1| putative protein [Arabidopsis thaliana] gi|11282... 57 8e-08
dbj|BAB10659.1| unnamed protein product [Arabidopsis thaliana] g... 57 8e-08
gb|AAP51965.1| unknown protein [Oryza sativa (japonica cultivar-... 57 1e-07
emb|CAB88310.1| putative protein [Arabidopsis thaliana] gi|11358... 57 1e-07
dbj|BAC42633.1| unknown protein [Arabidopsis thaliana] gi|289510... 57 1e-07
dbj|BAD46472.1| hypothetical protein [Oryza sativa (japonica cul... 57 1e-07
gb|AAF34431.1| hypothetical protein [Oryza sativa] 57 1e-07
emb|CAB80790.1| AT4g00320 [Arabidopsis thaliana] gi|6049880|gb|A... 57 1e-07
gb|AAF79290.1| F14D16.22 [Arabidopsis thaliana] 57 1e-07
ref|NP_173341.1| F-box family protein [Arabidopsis thaliana] 57 1e-07
ref|NP_567169.2| F-box family protein [Arabidopsis thaliana] 57 1e-07
gb|AAF34419.1| hypothetical protein [Oryza sativa] 57 1e-07
dbj|BAB11272.1| unnamed protein product [Arabidopsis thaliana] g... 56 2e-07
gb|AAP51971.1| putative copia-type polyprotein [Oryza sativa (ja... 56 2e-07
emb|CAE04218.2| OSJNBa0064D20.2 [Oryza sativa (japonica cultivar... 56 2e-07
emb|CAE03138.1| OJ000114_01.19 [Oryza sativa (japonica cultivar-... 56 2e-07
>emb|CAB10175.1| hypothetical protein [Arabidopsis thaliana]
gi|7268100|emb|CAB78438.1| hypothetical protein
[Arabidopsis thaliana] gi|18414110|ref|NP_567414.1|
F-box family protein [Arabidopsis thaliana]
gi|7485113|pir||E71400 hypothetical protein -
Arabidopsis thaliana
Length = 434
Score = 61.2 bits (147), Expect = 5e-09
Identities = 26/44 (59%), Positives = 35/44 (79%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNAD 52
D +S LPDE++YHILS+L K+ ALTS+LSKRW+ L+ +PN D
Sbjct: 2 DHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFVPNLD 45
Score = 38.9 bits (89), Expect = 0.028
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKILETNHIHYDDDSDSDMEEEE 111
D +S+LP EVL IL L TK+ +T+ILS RWR + + + D D + +E
Sbjct: 2 DHVSSLPDEVLYHILSFLTTKEAALTSILSKRWRNLFTFV-----PNLDIDDSVFLHPQE 56
Query: 112 EEEEEEEEEEEQQEYV 127
+E+ E ++ ++V
Sbjct: 57 GKEDRYEIQKSFMKFV 72
>emb|CAB80774.1| hypothetical protein [Arabidopsis thaliana]
gi|3193321|gb|AAC19303.1| F6N15.5 gene product
[Arabidopsis thaliana] gi|7486547|pir||T01344
hypothetical protein F6N15.5 - Arabidopsis thaliana
Length = 509
Score = 58.2 bits (139), Expect = 5e-08
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNAD 52
DRIS+LPD ++ ILS+LP K + TS+ SK+W+PLW+ +PN +
Sbjct: 62 DRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLE 105
Score = 36.2 bits (82), Expect = 0.18
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 46 RAMPNADRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKI--LETNHIHYDDDS 103
R + DRIS LP +L IL LPTK T++ S +WR + + LE + YDD
Sbjct: 56 RVVMGKDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKE 115
Query: 104 DSDMEE 109
E
Sbjct: 116 QYTFSE 121
>gb|AAM61661.1| unknown [Arabidopsis thaliana]
Length = 441
Score = 58.2 bits (139), Expect = 5e-08
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNAD 52
DRIS+LPD ++ ILS+LP K + TS+ SK+W+PLW+ +PN +
Sbjct: 4 DRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLE 47
Score = 35.0 bits (79), Expect = 0.41
Identities = 23/60 (38%), Positives = 30/60 (49%), Gaps = 2/60 (3%)
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKI--LETNHIHYDDDSDSDMEE 109
DRIS LP +L IL LPTK T++ S +WR + + LE + YDD E
Sbjct: 4 DRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKEQYTFSE 63
>ref|NP_567152.1| F-box family protein [Arabidopsis thaliana]
Length = 453
Score = 58.2 bits (139), Expect = 5e-08
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNAD 52
DRIS+LPD ++ ILS+LP K + TS+ SK+W+PLW+ +PN +
Sbjct: 16 DRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLE 59
Score = 36.2 bits (82), Expect = 0.18
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Query: 46 RAMPNADRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKI--LETNHIHYDDDS 103
R + DRIS LP +L IL LPTK T++ S +WR + + LE + YDD
Sbjct: 10 RVVMGKDRISELPDALLIKILSFLPTKIVVATSVFSKQWRPLWKLVPNLEFDSEDYDDKE 69
Query: 104 DSDMEE 109
E
Sbjct: 70 QYTFSE 75
>emb|CAB86926.1| putative protein [Arabidopsis thaliana] gi|11282357|pir||T47780
hypothetical protein F17J16.30 - Arabidopsis thaliana
Length = 977
Score = 57.4 bits (137), Expect = 8e-08
Identities = 25/44 (56%), Positives = 33/44 (74%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNAD 52
D +S+LP+E+ HILS+LP K ALTS+LSK W LW+ +PN D
Sbjct: 608 DLVSNLPEEVRCHILSFLPTKHAALTSVLSKSWLNLWKLVPNLD 651
Score = 48.9 bits (115), Expect = 3e-05
Identities = 22/37 (59%), Positives = 30/37 (80%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLW 45
DRIS+LP+EII HI+S+L K+ A S+LSKRW+ L+
Sbjct: 2 DRISNLPNEIICHIVSFLSAKEAAFASILSKRWRNLF 38
Score = 33.1 bits (74), Expect = 1.6
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKILETNHIHYDD 101
DRIS LP E++ I+ L K+ +ILS RWR + +++ + +DD
Sbjct: 2 DRISNLPNEIICHIVSFLSAKEAAFASILSKRWRNLFTIVIK---LQFDD 48
Score = 32.7 bits (73), Expect = 2.0
Identities = 26/63 (41%), Positives = 34/63 (53%), Gaps = 4/63 (6%)
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKILETNHIHYDDDSDSDMEEEE 111
D +S LP EV IL LPTK +T++LS W L K++ I DDS+ + EEE
Sbjct: 608 DLVSNLPEEVRCHILSFLPTKHAALTSVLSKSWLN-LWKLVPNLDI---DDSEFLLPEEE 663
Query: 112 EEE 114
E
Sbjct: 664 IPE 666
>dbj|BAB10659.1| unnamed protein product [Arabidopsis thaliana]
gi|15238204|ref|NP_198999.1| F-box family protein
[Arabidopsis thaliana]
Length = 540
Score = 57.4 bits (137), Expect = 8e-08
Identities = 26/42 (61%), Positives = 33/42 (77%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPN 50
DRIS LPD +I HILS+LP K+ A T++L+KRWKPL +PN
Sbjct: 14 DRISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFVPN 55
Score = 34.7 bits (78), Expect = 0.53
Identities = 19/52 (36%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 50 NADRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKILETNHIHYDD 101
+ DRIS LP ++ IL LPTK+ T +L+ RW+ +L + ++++DD
Sbjct: 12 SGDRISGLPDALICHILSFLPTKEAASTTVLAKRWKPLLAFV---PNLNFDD 60
>gb|AAP51965.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|37530752|ref|NP_919678.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|20042917|gb|AAM08745.1| Unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 949
Score = 57.0 bits (136), Expect = 1e-07
Identities = 26/46 (56%), Positives = 35/46 (75%), Gaps = 2/46 (4%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMP--NAD 52
DRIS LPD+I++HI+S+L +Q T +LS+RW+ LWR MP NAD
Sbjct: 90 DRISGLPDKILHHIMSFLNTRQAVQTCVLSRRWRNLWRTMPCINAD 135
Score = 53.5 bits (127), Expect = 1e-06
Identities = 25/46 (54%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMP--NAD 52
D ISDLPDEI++ I+S+L +Q T +LS+RW+ LWR +P NAD
Sbjct: 549 DWISDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWRTVPCINAD 594
Score = 33.9 bits (76), Expect = 0.91
Identities = 17/36 (47%), Positives = 23/36 (63%)
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRV 87
DRIS LP ++L I+ L T+Q T +LS RWR +
Sbjct: 90 DRISGLPDKILHHIMSFLNTRQAVQTCVLSRRWRNL 125
Score = 31.2 bits (69), Expect = 5.9
Identities = 23/84 (27%), Positives = 34/84 (40%), Gaps = 15/84 (17%)
Query: 18 IIYHILSYLPPKQIALTSLLSKRWKPLWRAM--------------PNADRISALPFEVLS 63
+I+H+ +P + W P WR + D IS LP E+L
Sbjct: 502 VIFHMAIKVPHAHHLFDETPLRAWPP-WRGVLAVARRKVKTPAHAAGMDWISDLPDEILH 560
Query: 64 CILYNLPTKQFFVTAILSWRWRRV 87
I+ L +Q T +LS RWR +
Sbjct: 561 RIMSFLNARQAVQTCVLSRRWRNL 584
>emb|CAB88310.1| putative protein [Arabidopsis thaliana] gi|11358158|pir||T49176
hypothetical protein T20N10.280 - Arabidopsis thaliana
Length = 455
Score = 57.0 bits (136), Expect = 1e-07
Identities = 26/44 (59%), Positives = 33/44 (74%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNAD 52
DR+S+LPD + HILS+LP K IALTS+LSK W LW+ +P D
Sbjct: 2 DRVSNLPDGVRGHILSFLPAKHIALTSVLSKSWLNLWKLIPILD 45
>dbj|BAC42633.1| unknown protein [Arabidopsis thaliana] gi|28951059|gb|AAO63453.1|
At3g58930 [Arabidopsis thaliana]
gi|30694890|ref|NP_191452.2| F-box family protein
[Arabidopsis thaliana]
Length = 482
Score = 57.0 bits (136), Expect = 1e-07
Identities = 26/44 (59%), Positives = 33/44 (74%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNAD 52
DR+S+LPD + HILS+LP K IALTS+LSK W LW+ +P D
Sbjct: 2 DRVSNLPDGVRGHILSFLPAKHIALTSVLSKSWLNLWKLIPILD 45
>dbj|BAD46472.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 591
Score = 57.0 bits (136), Expect = 1e-07
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 11/63 (17%)
Query: 1 MAAPPTTTDRISD-----------LPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMP 49
MA+PPT+ I+ LPD++++H+LS+LP A TSLLS+RW+ LW +MP
Sbjct: 1 MASPPTSESAITSAGSASASGFDCLPDDLVHHVLSFLPAPDAACTSLLSRRWRNLWVSMP 60
Query: 50 NAD 52
D
Sbjct: 61 CLD 63
>gb|AAF34431.1| hypothetical protein [Oryza sativa]
Length = 373
Score = 57.0 bits (136), Expect = 1e-07
Identities = 22/41 (53%), Positives = 32/41 (77%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMP 49
DRISDLPD++I+H+LS LP + T L++RW+ LWR++P
Sbjct: 6 DRISDLPDDVIHHVLSLLPSRDAVRTCALARRWRDLWRSVP 46
Score = 31.6 bits (70), Expect = 4.5
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 51 ADRISALPFEVLSCILYNLPTKQFFVTAILSWRWR 85
ADRIS LP +V+ +L LP++ T L+ RWR
Sbjct: 5 ADRISDLPDDVIHHVLSLLPSRDAVRTCALARRWR 39
>emb|CAB80790.1| AT4g00320 [Arabidopsis thaliana] gi|6049880|gb|AAF02795.1| F5I10.18
gene product [Arabidopsis thaliana]
gi|2252838|gb|AAB62837.1| A_IG005I10.18 gene product
[Arabidopsis thaliana] gi|7485263|pir||T01539
hypothetical protein A_IG005I10.18 - Arabidopsis
thaliana
Length = 773
Score = 56.6 bits (135), Expect = 1e-07
Identities = 28/52 (53%), Positives = 35/52 (66%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNADRISALPFE 60
D IS LPD +I HILS+LP K A T++L+KRWKPL MPN D + F+
Sbjct: 279 DGISGLPDAMICHILSFLPTKVAASTTVLAKRWKPLLAFMPNLDFDESFRFD 330
Score = 51.6 bits (122), Expect = 4e-06
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNAD 52
D+ S LPDE++ +LS+LP K TSLLS RWK LW +P +
Sbjct: 2 DKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLE 45
Score = 33.1 bits (74), Expect = 1.6
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKI--LETNHIHY 99
D+ S LP E+L +L LPTK T++LS RW+ + + LE + HY
Sbjct: 2 DKTSQLPDELLVKVLSFLPTKDAVRTSLLSMRWKSLWMWLPKLEYDFRHY 51
>gb|AAF79290.1| F14D16.22 [Arabidopsis thaliana]
Length = 269
Score = 56.6 bits (135), Expect = 1e-07
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPN 50
DRI+ L DEII HILS+LP K+ ALTS+LSKRW+ L+ PN
Sbjct: 2 DRINGLSDEIICHILSFLPTKESALTSVLSKRWRNLFALTPN 43
Score = 38.5 bits (88), Expect = 0.037
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKILETNHIHYDDD 102
DRI+ L E++ IL LPTK+ +T++LS RWR N T ++H DD
Sbjct: 2 DRINGLSDEIICHILSFLPTKESALTSVLSKRWR---NLFALTPNLHLVDD 49
>ref|NP_173341.1| F-box family protein [Arabidopsis thaliana]
Length = 83
Score = 56.6 bits (135), Expect = 1e-07
Identities = 27/42 (64%), Positives = 33/42 (78%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPN 50
DRI+ L DEII HILS+LP K+ ALTS+LSKRW+ L+ PN
Sbjct: 2 DRINGLSDEIICHILSFLPTKESALTSVLSKRWRNLFALTPN 43
Score = 38.5 bits (88), Expect = 0.037
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 3/51 (5%)
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKILETNHIHYDDD 102
DRI+ L E++ IL LPTK+ +T++LS RWR N T ++H DD
Sbjct: 2 DRINGLSDEIICHILSFLPTKESALTSVLSKRWR---NLFALTPNLHLVDD 49
>ref|NP_567169.2| F-box family protein [Arabidopsis thaliana]
Length = 507
Score = 56.6 bits (135), Expect = 1e-07
Identities = 28/52 (53%), Positives = 35/52 (66%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNADRISALPFE 60
D IS LPD +I HILS+LP K A T++L+KRWKPL MPN D + F+
Sbjct: 13 DGISGLPDAMICHILSFLPTKVAASTTVLAKRWKPLLAFMPNLDFDESFRFD 64
>gb|AAF34419.1| hypothetical protein [Oryza sativa]
Length = 476
Score = 56.6 bits (135), Expect = 1e-07
Identities = 27/73 (36%), Positives = 42/73 (56%), Gaps = 5/73 (6%)
Query: 2 AAPPTTTDRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRA-----MPNADRISA 56
A PPT DRI LPD ++ HIL +LPP + T +L++RW+ LW++ + N D
Sbjct: 85 APPPTGGDRIGGLPDGVLQHILGFLPPHEAVRTCVLARRWRHLWKSVAALRITNWDWRKV 144
Query: 57 LPFEVLSCILYNL 69
+P E +++L
Sbjct: 145 VPMEEFRYFVHHL 157
Score = 32.0 bits (71), Expect = 3.5
Identities = 20/58 (34%), Positives = 27/58 (46%)
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKILETNHIHYDDDSDSDMEE 109
DRI LP VL IL LP + T +L+ RWR + + ++D MEE
Sbjct: 92 DRIGGLPDGVLQHILGFLPPHEAVRTCVLARRWRHLWKSVAALRITNWDWRKVVPMEE 149
>dbj|BAB11272.1| unnamed protein product [Arabidopsis thaliana]
gi|15241216|ref|NP_200455.1| F-box family protein
[Arabidopsis thaliana]
Length = 430
Score = 56.2 bits (134), Expect = 2e-07
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNAD 52
DRIS LPD++++ ILS++P K + T+LLSKRW+ LW+ +P D
Sbjct: 2 DRISLLPDDVVFKILSFVPTKVVVSTNLLSKRWRYLWKHVPKLD 45
Score = 33.9 bits (76), Expect = 0.91
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 52 DRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKILETNHIHYDDDSDSDME 108
DRIS LP +V+ IL +PTK T +LS RWR + + + + Y D S D E
Sbjct: 2 DRISLLPDDVVFKILSFVPTKVVVSTNLLSKRWRYLWKHVPK---LDYRDPSLVDTE 55
>gb|AAP51971.1| putative copia-type polyprotein [Oryza sativa (japonica
cultivar-group)] gi|37530764|ref|NP_919684.1| putative
copia-type polyprotein [Oryza sativa (japonica
cultivar-group)] gi|20042923|gb|AAM08751.1| Putative
copia-type polyprotein [Oryza sativa (japonica
cultivar-group)]
Length = 1803
Score = 55.8 bits (133), Expect = 2e-07
Identities = 33/79 (41%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 9 DRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMP--NADRISALPFEVLSCIL 66
DR+SDLPDEI++ I+S+L +Q T +LS+RW+ LW +P NAD F I
Sbjct: 1424 DRLSDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWHTVPCINAD------FVEFDSIG 1477
Query: 67 YNLPTKQF--FVTAILSWR 83
Y P F FV +L +R
Sbjct: 1478 YQGPVVPFKRFVNRLLEFR 1496
Score = 33.5 bits (75), Expect = 1.2
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 40 RWKPLWRAMPNADRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLNKI--LETNHI 97
R +P DR+S LP E+L I+ L +Q T +LS RWR + + + + + +
Sbjct: 1412 RARPPMEDAAGRDRLSDLPDEILHRIMSFLNARQAVQTCVLSRRWRNLWHTVPCINADFV 1471
Query: 98 HYD 100
+D
Sbjct: 1472 EFD 1474
>emb|CAE04218.2| OSJNBa0064D20.2 [Oryza sativa (japonica cultivar-group)]
Length = 388
Score = 55.8 bits (133), Expect = 2e-07
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 5 PTTTDRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNAD 52
P TDR+S LPD +++ ILS L +Q+ TS+LSKRW+ LWR++P D
Sbjct: 35 PPATDRLSALPDALLHTILSSLKGRQMVQTSVLSKRWRHLWRSVPCLD 82
Score = 38.9 bits (89), Expect = 0.028
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 36 LLSKRWKPLWRAM------PNADRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLN 89
L+ W+P R P DR+SALP +L IL +L +Q T++LS RWR +
Sbjct: 17 LILHPWRPRGRGAVQTPSPPATDRLSALPDALLHTILSSLKGRQMVQTSVLSKRWRHLWR 76
Query: 90 KI 91
+
Sbjct: 77 SV 78
>emb|CAE03138.1| OJ000114_01.19 [Oryza sativa (japonica cultivar-group)]
gi|32479668|emb|CAE02503.1| P0076O17.1 [Oryza sativa
(japonica cultivar-group)] gi|50924512|ref|XP_472616.1|
OJ000114_01.19 [Oryza sativa (japonica cultivar-group)]
Length = 384
Score = 55.8 bits (133), Expect = 2e-07
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 5 PTTTDRISDLPDEIIYHILSYLPPKQIALTSLLSKRWKPLWRAMPNAD 52
P TDR+S LPD +++ ILS L +Q+ TS+LSKRW+ LWR++P D
Sbjct: 31 PPATDRLSALPDALLHTILSSLKGRQMVQTSVLSKRWRHLWRSVPCLD 78
Score = 38.9 bits (89), Expect = 0.028
Identities = 22/62 (35%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 36 LLSKRWKPLWRAM------PNADRISALPFEVLSCILYNLPTKQFFVTAILSWRWRRVLN 89
L+ W+P R P DR+SALP +L IL +L +Q T++LS RWR +
Sbjct: 13 LILHPWRPRGRGAVQTPSPPATDRLSALPDALLHTILSSLKGRQMVQTSVLSKRWRHLWR 72
Query: 90 KI 91
+
Sbjct: 73 SV 74
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.315 0.133 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 245,904,257
Number of Sequences: 2540612
Number of extensions: 10693528
Number of successful extensions: 518813
Number of sequences better than 10.0: 6889
Number of HSP's better than 10.0 without gapping: 6566
Number of HSP's successfully gapped in prelim test: 363
Number of HSP's that attempted gapping in prelim test: 333593
Number of HSP's gapped (non-prelim): 77481
length of query: 127
length of database: 863,360,394
effective HSP length: 103
effective length of query: 24
effective length of database: 601,677,358
effective search space: 14440256592
effective search space used: 14440256592
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 68 (30.8 bits)
Medicago: description of AC149206.8