BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148758.1 - phase: 0 /pseudo
(143 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB79339.1| putative protein [Arabidopsis thaliana] gi|50517... 182 2e-45
ref|XP_476725.1| unknown protein [Oryza sativa (japonica cultiva... 155 3e-37
dbj|BAD87114.1| unknown protein [Oryza sativa (japonica cultivar... 147 5e-35
gb|AAM20282.1| unknown protein [Arabidopsis thaliana] gi|1660459... 142 2e-33
ref|XP_475900.1| unknown protein [Oryza sativa (japonica cultiva... 124 4e-28
gb|AAL75908.1| At1g29690/F15D2_24 [Arabidopsis thaliana] gi|1839... 109 1e-23
ref|NP_916103.1| P0481E12.26 [Oryza sativa (japonica cultivar-gr... 106 1e-22
ref|XP_465614.1| unknown protein [Oryza sativa (japonica cultiva... 105 3e-22
dbj|BAD73817.1| unknown protein [Oryza sativa (japonica cultivar... 105 3e-22
ref|XP_467671.1| unknown protein [Oryza sativa (japonica cultiva... 97 1e-19
gb|AAM20539.1| unknown protein [Arabidopsis thaliana] gi|2731198... 93 1e-18
gb|AAF79223.1| F10B6.18 [Arabidopsis thaliana] gi|25333973|pir||... 93 1e-18
ref|NP_914227.1| P0401G10.6 [Oryza sativa (japonica cultivar-gro... 84 7e-16
dbj|BAD45980.1| hypothetical protein [Oryza sativa (japonica cul... 80 1e-14
gb|AAL06838.1| At1g29690/F15D2_24 [Arabidopsis thaliana] 70 1e-11
ref|XP_465615.1| unknown protein [Oryza sativa (japonica cultiva... 54 8e-07
gb|AAP75718.1| envelope glycoprotein [Human immunodeficiency vir... 35 0.50
gb|EAA62275.1| hypothetical protein AN5570.2 [Aspergillus nidula... 35 0.50
gb|AAS59001.1| envelope glycoprotein [Human immunodeficiency vir... 32 4.2
ref|ZP_00417850.1| Oxidoreductase FAD/NAD(P)-binding:Uncharacter... 31 5.5
>emb|CAB79339.1| putative protein [Arabidopsis thaliana] gi|5051771|emb|CAB45064.1|
putative protein [Arabidopsis thaliana]
gi|30686484|ref|NP_849433.1| expressed protein
[Arabidopsis thaliana] gi|7452465|pir||T09892
hypothetical protein T22A6.120 - Arabidopsis thaliana
Length = 606
Score = 182 bits (461), Expect = 2e-45
Identities = 89/142 (62%), Positives = 108/142 (75%)
Query: 1 MEDLHRFLEFQLPRQWAPVLGEIHLGSYRKHQVNTWLRFSILGPKLYINTTPVDVGNRPV 60
+E+LH+FLEFQLPRQWAPV E+ LG RK Q L+FS GPKLY+NTTPVDVG RP+
Sbjct: 325 IEELHQFLEFQLPRQWAPVFSELPLGPQRKQQSCASLQFSFFGPKLYVNTTPVDVGKRPI 384
Query: 61 TGLRLQLEGSRSNRLAIHLQHLASLPKSLPLADNANAYLSCDSYSCTFHKKVKRNCFSYV 120
TG+RL LEG RSNRLAIHLQHL+SLPK L D+ N + +S+ +++KV +S+V
Sbjct: 385 TGMRLYLEGRRSNRLAIHLQHLSSLPKIYQLEDDLNRSIRQESHDRRYYEKVNWKNYSHV 444
Query: 121 CTAPVESDDSLSIVTGAQLQVE 142
CT PVESDD LS+VTGAQL VE
Sbjct: 445 CTEPVESDDDLSVVTGAQLHVE 466
>ref|XP_476725.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|50509956|dbj|BAD30366.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
gi|33146806|dbj|BAC79754.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 608
Score = 155 bits (391), Expect = 3e-37
Identities = 84/144 (58%), Positives = 106/144 (73%), Gaps = 6/144 (4%)
Query: 1 MEDLHRFLEFQLPRQWAPVLGEIHLGSYRKHQVNTWLRFSILGPKLYINTTPVDVGNRPV 60
+E+LH+FLEFQLPRQWAPV ++ LG RK Q L +++GPKLY+ T VDVG RPV
Sbjct: 325 IEELHQFLEFQLPRQWAPVYSDLPLGPQRKRQSTVSLPVNLIGPKLYVCTNMVDVGKRPV 384
Query: 61 TGLRLQLEGSRSNRLAIHLQHLASLPKSLPLADNANAYLSCDSYSCTFHKKV---KRNCF 117
TG+RL LEG RSN+LAIHLQHL SLP+ L L D+ + ++Y +++ + KR F
Sbjct: 385 TGIRLFLEGKRSNKLAIHLQHLCSLPQILQLEDDPYNDQTPEAYDRKYYEPIGSWKR--F 442
Query: 118 SYVCTAPVESDDSLSIVTGAQLQV 141
S+VCTAPVESDDS SIVTGAQL+V
Sbjct: 443 SHVCTAPVESDDS-SIVTGAQLEV 465
>dbj|BAD87114.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 608
Score = 147 bits (371), Expect = 5e-35
Identities = 80/144 (55%), Positives = 105/144 (72%), Gaps = 6/144 (4%)
Query: 1 MEDLHRFLEFQLPRQWAPVLGEIHLGSYRKHQVNTWLRFSILGPKLYINTTPVDVGNRPV 60
+E+LH+FLEFQLPRQWAPV ++ LG RK Q + L +++GPKLY+ T VDVG RPV
Sbjct: 326 VEELHQFLEFQLPRQWAPVYSDLPLGPQRKRQSSASLPVNLIGPKLYVCTNMVDVGKRPV 385
Query: 61 TGLRLQLEGSRSNRLAIHLQHLASLPKSLPLADNANAYLSCDSYSCTFHKKV---KRNCF 117
TGLRL LEG +SN+LAIHLQHL SLP+ + L D+ + ++ +++ + KR F
Sbjct: 386 TGLRLFLEGQKSNKLAIHLQHLCSLPQIIQLEDDTYNPQTPEAEIRKYYEPIGSWKR--F 443
Query: 118 SYVCTAPVESDDSLSIVTGAQLQV 141
S+VCTAPV+SDDS SIVTGA L+V
Sbjct: 444 SHVCTAPVDSDDS-SIVTGAHLEV 466
>gb|AAM20282.1| unknown protein [Arabidopsis thaliana] gi|16604599|gb|AAL24092.1|
unknown protein [Arabidopsis thaliana]
gi|18396768|ref|NP_564307.1| expressed protein
[Arabidopsis thaliana] gi|6560762|gb|AAF16762.1|
F3M18.18 [Arabidopsis thaliana] gi|25333976|pir||C86410
protein F3M18.18 [imported] - Arabidopsis thaliana
Length = 612
Score = 142 bits (358), Expect = 2e-33
Identities = 76/147 (51%), Positives = 100/147 (67%), Gaps = 5/147 (3%)
Query: 1 MEDLHRFLEFQLPRQWAPVLGEIHLGSYRKHQVNTWLRFSILGPKLYINTTPVDVGNRPV 60
+E+LH+FLEFQLPRQWAPV G++ LG R Q + L+FS++GPKLY+NT+ VD G RPV
Sbjct: 331 IEELHQFLEFQLPRQWAPVYGDLPLGLRRSKQSSPSLQFSLMGPKLYVNTSKVDSGERPV 390
Query: 61 TGLRLQLEGSRSNRLAIHLQHLASLPKSLPLADNANAYLSCDSYSCTFHKKVKRNCFSYV 120
TGLR LEG + N LAIHLQHL++ P SL L+ + + ++ VK FS+V
Sbjct: 391 TGLRFFLEGKKGNHLAIHLQHLSACPPSLHLSHDDTYEPIEEPVEKGYYVPVKWGIFSHV 450
Query: 121 CTAPVE-----SDDSLSIVTGAQLQVE 142
CT PV+ SDD+ SIVT A L+V+
Sbjct: 451 CTYPVQYNGARSDDTASIVTKAWLEVK 477
>ref|XP_475900.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|49328015|gb|AAT58716.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 628
Score = 124 bits (312), Expect = 4e-28
Identities = 65/150 (43%), Positives = 96/150 (63%), Gaps = 7/150 (4%)
Query: 1 MEDLHRFLEFQLPRQWAPVLGEIHL--GSYRKHQVNTWLRFSILGPKLYINTTPVDVGNR 58
+E+LH+FLEFQ+PRQWAP GE+ L G +K L+F+++GPKL++ T D GNR
Sbjct: 338 IEELHQFLEFQVPRQWAPEFGELPLALGPRKKKNSLPSLQFTLMGPKLHVTTAKADSGNR 397
Query: 59 PVTGLRLQLEGSRSNRLAIHLQHLASLPKSLPLADNANAYLSCDSYSCTFHKKVKRNCFS 118
PVTG+RL LEG ++NRL +HLQHL++ P ++ +A + + + +K S
Sbjct: 398 PVTGIRLFLEGKKNNRLGVHLQHLSATPGTITIAGEVASAEDATVRERDYIEPIKSPLLS 457
Query: 119 YVCTAPVE-----SDDSLSIVTGAQLQVEK 143
+VCTAPV+ DD +IVT A L+V++
Sbjct: 458 HVCTAPVQYNGARIDDCAAIVTRAWLEVQE 487
>gb|AAL75908.1| At1g29690/F15D2_24 [Arabidopsis thaliana]
gi|18397204|ref|NP_564333.1| expressed protein
[Arabidopsis thaliana] gi|12323548|gb|AAG51760.1|
unknown protein; 124288-121737 [Arabidopsis thaliana]
gi|25333974|pir||C86420 unknown protein, 124288-121737
[imported] - Arabidopsis thaliana
Length = 561
Score = 109 bits (273), Expect = 1e-23
Identities = 67/154 (43%), Positives = 93/154 (59%), Gaps = 17/154 (11%)
Query: 1 MEDLHRFLEFQLPRQWAPVLGEIHLGSYRKHQVNTWLRFSILGPKLYINTTPVDVGNRPV 60
+EDL FL++Q+ R WAP + RK V + L+FS++GPKL+I+ V VG +PV
Sbjct: 307 IEDLQYFLDYQIARAWAPEQSNLQ----RKEPVCSSLQFSLMGPKLFISADQVTVGRKPV 362
Query: 61 TGLRLQLEGSRSNRLAIHLQHLASLPKSL-PLADN-----ANAYLSCDSYSCTFHKKVKR 114
TGLRL LEGS+ NRL+IHLQHL SLPK L P D+ A + + + + +K
Sbjct: 363 TGLRLSLEGSKQNRLSIHLQHLVSLPKILQPHWDSHVPIGAPKWQGPEEQDSRWFEPIKW 422
Query: 115 NCFSYVCTAPVESDDS-------LSIVTGAQLQV 141
FS+V T+P+E ++ + IVTGAQL V
Sbjct: 423 KNFSHVSTSPIEHTETHIGDLSGVHIVTGAQLGV 456
>ref|NP_916103.1| P0481E12.26 [Oryza sativa (japonica cultivar-group)]
gi|14209545|dbj|BAB56041.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 553
Score = 106 bits (265), Expect = 1e-22
Identities = 66/154 (42%), Positives = 94/154 (60%), Gaps = 14/154 (9%)
Query: 1 MEDLHRFLEFQLPRQWAPVLGEIHLGSYRKHQVNTWLRFSILGPKLYINTTPVDVGNRPV 60
+E+L FL+FQ+ WAPV I G +RK V L+FS++GPKL+++T + VG RPV
Sbjct: 303 IEELQYFLDFQVQLVWAPVPPGI-AGQHRKEPVCPSLQFSLMGPKLFVSTEQISVGRRPV 361
Query: 61 TGLRLQLEGSRSNRLAIHLQHLASLPK-SLPLADN-----ANAYLSCDSYSCTFHKKVKR 114
TGL+L LEG++ NRLAIHLQHL SLPK +P D+ + + + + +K
Sbjct: 362 TGLKLCLEGAKQNRLAIHLQHLGSLPKIFVPHWDSHITIGPPKWQGPEEQDSRWFEPIKW 421
Query: 115 NCFSYVCTAPVESDDS-------LSIVTGAQLQV 141
F++V TAP+E ++ + IVTGAQL V
Sbjct: 422 RNFAHVSTAPIEYTETSITDLSGVYIVTGAQLGV 455
>ref|XP_465614.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|47848124|dbj|BAD21906.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 634
Score = 105 bits (261), Expect = 3e-22
Identities = 58/150 (38%), Positives = 87/150 (57%), Gaps = 12/150 (8%)
Query: 2 EDLHRFLEFQLPRQWAPVLGEIHLGSYRKHQVNTWLRFSILGPKLYINTTPVDVGNRPVT 61
EDL FLEFQ+P QWAP+ E+ LG ++ L+F LGPKL ++T+ V ++PV
Sbjct: 324 EDLQHFLEFQVPLQWAPLFNELILGPQKRKGSYPSLQFRFLGPKLQVSTSQVSSSHKPVV 383
Query: 62 GLRLQLEGSRSNRLAIHLQHLASLPKSL--PLADNANAYLSCDSYSCTFHKKVKRNCFSY 119
GLRL LEG + NRLAIH+QHL+S P L L+ + + + + + + ++ +S
Sbjct: 384 GLRLYLEGRKCNRLAIHVQHLSSAPSMLGDSLSSSMSEWRESEEVGAGYIEPIQWKSYSC 443
Query: 120 VCTAPVESDD----------SLSIVTGAQL 139
VCT+ V+ + + +VTGAQL
Sbjct: 444 VCTSKVDYNPEWLKRVPGGRGVFVVTGAQL 473
>dbj|BAD73817.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 551
Score = 105 bits (261), Expect = 3e-22
Identities = 58/150 (38%), Positives = 87/150 (57%), Gaps = 12/150 (8%)
Query: 2 EDLHRFLEFQLPRQWAPVLGEIHLGSYRKHQVNTWLRFSILGPKLYINTTPVDVGNRPVT 61
EDL FLEFQ+P QWAP+ E+ LG ++ L+F LGPKL ++T+ V ++PV
Sbjct: 241 EDLQHFLEFQVPLQWAPLFNELILGPQKRKGSYPSLQFRFLGPKLQVSTSQVSSSHKPVV 300
Query: 62 GLRLQLEGSRSNRLAIHLQHLASLPKSL--PLADNANAYLSCDSYSCTFHKKVKRNCFSY 119
GLRL LEG + NRLAIH+QHL+S P L L+ + + + + + + ++ +S
Sbjct: 301 GLRLYLEGRKCNRLAIHVQHLSSAPSMLGDSLSSSMSEWRESEEVGAGYIEPIQWKSYSC 360
Query: 120 VCTAPVESDD----------SLSIVTGAQL 139
VCT+ V+ + + +VTGAQL
Sbjct: 361 VCTSKVDYNPEWLKRVPGGRGVFVVTGAQL 390
>ref|XP_467671.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|46390438|dbj|BAD15900.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 620
Score = 96.7 bits (239), Expect = 1e-19
Identities = 62/154 (40%), Positives = 88/154 (56%), Gaps = 15/154 (9%)
Query: 3 DLHRFLEFQLPRQWAPVLGEIHLGSYRKHQVNT-WLRFSILGPKLYINTTPVDVGNRPVT 61
DL FL+FQ WAPVLGE+ LG Q ++ L FS+LG KLY+++T V V PVT
Sbjct: 324 DLRYFLDFQHHCVWAPVLGELPLGPCSHRQGSSPALHFSLLGSKLYVSSTEVVVPKLPVT 383
Query: 62 GLRLQLEGSRSNRLAIHLQHLASLPK--SLPLADNANAYLSCDSYS-CTFHKKVKRNCFS 118
G+RL LEG ++NRL IHLQHL++ P + AD + ++ + +++ V+ +
Sbjct: 384 GMRLHLEGKKNNRLGIHLQHLSTTPTFVAAARADKPPVWRGTEAVTDDRYYEPVQWRMLA 443
Query: 119 YVCTAPVESD-----------DSLSIVTGAQLQV 141
VCTAPV+ D + +V GAQL V
Sbjct: 444 RVCTAPVKYDPRWCAGDRRRRPAACVVAGAQLHV 477
>gb|AAM20539.1| unknown protein [Arabidopsis thaliana] gi|27311987|gb|AAO00959.1|
unknown protein [Arabidopsis thaliana]
gi|15223887|ref|NP_172931.1| expressed protein
[Arabidopsis thaliana]
Length = 627
Score = 93.2 bits (230), Expect = 1e-18
Identities = 60/159 (37%), Positives = 83/159 (51%), Gaps = 18/159 (11%)
Query: 3 DLHRFLEFQLPRQWAPVLGEIHLGSY-RKHQVNTWLRFSILGPKLYINTTPVDVGNRPVT 61
DL FL+F PR WAPV ++ G+ L + +GPKLY+NTTPV PVT
Sbjct: 334 DLQYFLDFSGPRAWAPVHNDLPFGAAPNMASAYPALHINFMGPKLYVNTTPVTSEKNPVT 393
Query: 62 GLRLQLEGSRSNRLAIHLQHLASLPKSL-PLADNANAYLSCDSYSCT--FHKKVKRNCFS 118
G+R LEG + NRLAIHLQHL + ++ + + + D + + + + FS
Sbjct: 394 GMRFFLEGKKCNRLAIHLQHLDNTRTTVGEKITDEHIWRGSDQITDNDRYFEPLNGKKFS 453
Query: 119 YVCTAPVESD--------------DSLSIVTGAQLQVEK 143
+VCT PV+ D D IVTGAQL+V+K
Sbjct: 454 HVCTVPVKYDPNWIKTTSNHKSQNDVAFIVTGAQLEVKK 492
>gb|AAF79223.1| F10B6.18 [Arabidopsis thaliana] gi|25333973|pir||H86281 protein
F10B6.18 [imported] - Arabidopsis thaliana
Length = 645
Score = 93.2 bits (230), Expect = 1e-18
Identities = 60/159 (37%), Positives = 83/159 (51%), Gaps = 18/159 (11%)
Query: 3 DLHRFLEFQLPRQWAPVLGEIHLGSY-RKHQVNTWLRFSILGPKLYINTTPVDVGNRPVT 61
DL FL+F PR WAPV ++ G+ L + +GPKLY+NTTPV PVT
Sbjct: 352 DLQYFLDFSGPRAWAPVHNDLPFGAAPNMASAYPALHINFMGPKLYVNTTPVTSEKNPVT 411
Query: 62 GLRLQLEGSRSNRLAIHLQHLASLPKSL-PLADNANAYLSCDSYSCT--FHKKVKRNCFS 118
G+R LEG + NRLAIHLQHL + ++ + + + D + + + + FS
Sbjct: 412 GMRFFLEGKKCNRLAIHLQHLDNTRTTVGEKITDEHIWRGSDQITDNDRYFEPLNGKKFS 471
Query: 119 YVCTAPVESD--------------DSLSIVTGAQLQVEK 143
+VCT PV+ D D IVTGAQL+V+K
Sbjct: 472 HVCTVPVKYDPNWIKTTSNHKSQNDVAFIVTGAQLEVKK 510
>ref|NP_914227.1| P0401G10.6 [Oryza sativa (japonica cultivar-group)]
Length = 573
Score = 84.0 bits (206), Expect = 7e-16
Identities = 58/141 (41%), Positives = 75/141 (53%), Gaps = 35/141 (24%)
Query: 1 MEDLHRFLEFQLPRQWAPVLGEIHLGSYRKHQVNTWLRFSILGPKLYINTTPVDVGNRPV 60
+E+LH+FLEFQLPRQWAPV ++ LG RK Q + L +++GPKLY+ T +
Sbjct: 326 VEELHQFLEFQLPRQWAPVYSDLPLGPQRKRQSSASLPVNLIGPKLYVCTNMI------- 378
Query: 61 TGLRLQLEGSRSNRLAIHLQHLASLPKSLPLADNANAYLSCDSYSCTFHKKVKRNCFSYV 120
+QLE N P A+ Y S+ KR FS+V
Sbjct: 379 ----IQLEDDTYN-------------PQTPEAEIRKYYEPIGSW--------KR--FSHV 411
Query: 121 CTAPVESDDSLSIVTGAQLQV 141
CTAPV+SDDS SIVTGA L+V
Sbjct: 412 CTAPVDSDDS-SIVTGAHLEV 431
>dbj|BAD45980.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 614
Score = 80.1 bits (196), Expect = 1e-14
Identities = 57/162 (35%), Positives = 84/162 (51%), Gaps = 38/162 (23%)
Query: 3 DLHRFLEFQLPRQWAPVLGEIHLGSYRKHQ-VNTWLRFS-ILGPKLYINTTPVDVGNRPV 60
+L FL+FQ R WAPVL ++ LG Q N L FS ++ PKL P+
Sbjct: 331 ELRYFLDFQHHRLWAPVLSDLPLGLCSNRQGTNPALHFSLVIVPKL------------PI 378
Query: 61 TGLRLQLEGSRSNRLAIHLQHLASLPKSL-------PLADNANAYLSCDSYSCTFHKKVK 113
TG+RL LEG ++NRL IHLQHL++ P + P A + ++ + Y ++ V+
Sbjct: 379 TGMRLHLEGKKNNRLGIHLQHLSTTPTFIAGGWSGRPPAWRGSEAIADERY----YEPVQ 434
Query: 114 RNCFSYVCTAPVESD-------------DSLSIVTGAQLQVE 142
R F++VCT PV+ D + +V+GAQL V+
Sbjct: 435 RRMFAHVCTVPVKHDPRWLAAGDGGGGRPAAYVVSGAQLHVK 476
>gb|AAL06838.1| At1g29690/F15D2_24 [Arabidopsis thaliana]
Length = 383
Score = 70.1 bits (170), Expect = 1e-11
Identities = 35/71 (49%), Positives = 48/71 (67%), Gaps = 4/71 (5%)
Query: 1 MEDLHRFLEFQLPRQWAPVLGEIHLGSYRKHQVNTWLRFSILGPKLYINTTPVDVGNRPV 60
+EDL FL++Q+ R WAP + RK V + L+FS++GPKL+I+ V VG +PV
Sbjct: 307 IEDLQYFLDYQIARAWAPEQSNLQ----RKEPVCSSLQFSLMGPKLFISADQVTVGRKPV 362
Query: 61 TGLRLQLEGSR 71
TGLRL LEGS+
Sbjct: 363 TGLRLSLEGSK 373
>ref|XP_465615.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|47848125|dbj|BAD21907.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 406
Score = 53.9 bits (128), Expect = 8e-07
Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 2 EDLHRFLEFQLPRQWAPVLGEIHLGSYRKHQVNTWLRFSILGPKLYINTTPV 53
EDL FLEFQ+P QWAP+ E+ LG ++ L+F LGPKL ++T+ V
Sbjct: 324 EDLQHFLEFQVPLQWAPLFNELILGPQKRKGSYPSLQFRFLGPKLQVSTSQV 375
>gb|AAP75718.1| envelope glycoprotein [Human immunodeficiency virus 1]
Length = 843
Score = 34.7 bits (78), Expect = 0.50
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 38 RFSILGPKLYINTTPVDVGNRPVTGLRLQLEGS-RSNRLAIHLQHLASLPKSLPLADNAN 96
+F+ GP ++T GN+PV +L L GS +R+ I Q+++S K++ + N +
Sbjct: 232 KFNGTGPCTNVSTVQCTHGNKPVVSTQLLLNGSLAEDRIVIRSQNISSNTKNIIVHLNES 291
Query: 97 AYLSC 101
++C
Sbjct: 292 VQINC 296
>gb|EAA62275.1| hypothetical protein AN5570.2 [Aspergillus nidulans FGSC A4]
gi|67538800|ref|XP_663174.1| hypothetical protein
AN5570_2 [Aspergillus nidulans FGSC A4]
gi|49096494|ref|XP_409707.1| hypothetical protein
AN5570.2 [Aspergillus nidulans FGSC A4]
Length = 870
Score = 34.7 bits (78), Expect = 0.50
Identities = 23/64 (35%), Positives = 31/64 (47%), Gaps = 6/64 (9%)
Query: 44 PKLYINTTPVDVGNRPVT-GLRLQLEGSRSNRLAIHLQHLASLPKSLPLADNANAYLSCD 102
P L NTTP +P T L L +R N A+H + P P+AD + Y +CD
Sbjct: 675 PLLAENTTPSSPTTQPGTLHPELPLPAARGNTSALH-----ATPTIQPIADGRSMYGNCD 729
Query: 103 SYSC 106
+ SC
Sbjct: 730 NESC 733
>gb|AAS59001.1| envelope glycoprotein [Human immunodeficiency virus 1]
Length = 352
Score = 31.6 bits (70), Expect = 4.2
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 38 RFSILGPKLYINTTPVDVGNRPVTGLRLQLEGSRSNRLAIHLQHLASLPKSLPLADNANA 97
+F+ GP ++T G RPV +L L GS + + I ++ + K++ + N +
Sbjct: 113 KFNGTGPCTNVSTVQCTHGIRPVVSTQLLLNGSLAEEIVIRSENFTNNAKTIIVQLNESV 172
Query: 98 YLSC 101
++C
Sbjct: 173 VINC 176
>ref|ZP_00417850.1| Oxidoreductase FAD/NAD(P)-binding:Uncharacterized iron-regulated
membrane protein DUF337:Flavodoxin/nitric oxide synthase
[Azotobacter vinelandii AvOP] gi|67086554|gb|EAM06023.1|
Oxidoreductase FAD/NAD(P)-binding:Uncharacterized
iron-regulated membrane protein DUF337:Flavodoxin/nitric
oxide synthase [Azotobacter vinelandii AvOP]
Length = 783
Score = 31.2 bits (69), Expect = 5.5
Identities = 23/80 (28%), Positives = 33/80 (40%), Gaps = 11/80 (13%)
Query: 6 RFLEFQLPRQWAPVLGEIHLGSYRKHQVNTWLRFSILGPKLYINTTPVDVGNRPVTGLRL 65
R+ + LPR+ L +H G Y H + + LG L+ VTG +L
Sbjct: 312 RYADKSLPRRLLASLYPLHTGEYFGHPGRVLMMLASLGMPLFF-----------VTGWQL 360
Query: 66 QLEGSRSNRLAIHLQHLASL 85
L+ RS R A Q +L
Sbjct: 361 YLDRRRSRRAAREAQRALAL 380
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.321 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 252,453,494
Number of Sequences: 2540612
Number of extensions: 10013873
Number of successful extensions: 23567
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 23519
Number of HSP's gapped (non-prelim): 35
length of query: 143
length of database: 863,360,394
effective HSP length: 119
effective length of query: 24
effective length of database: 561,027,566
effective search space: 13464661584
effective search space used: 13464661584
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 67 (30.4 bits)
Medicago: description of AC148758.1