BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148528.1 + phase: 0
(131 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_175399.2| basic helix-loop-helix (bHLH) family protein [A... 67 1e-10
pir||D96534 Hypothetical protein [imported] - Arabidopsis thalia... 67 1e-10
emb|CAD41011.2| OSJNBa0042L16.10 [Oryza sativa (japonica cultiva... 60 2e-08
ref|XP_466126.1| hypothetical protein [Oryza sativa (japonica cu... 40 0.016
ref|NP_989464.1| transcription factor BMAL2 [Gallus gallus] gi|1... 37 0.081
ref|XP_394429.2| PREDICTED: similar to GA14905-PA [Apis mellifera] 37 0.081
ref|XP_553677.1| ENSANGP00000027226 [Anopheles gambiae str. PEST... 37 0.11
sp|P13903|TWIST_XENLA Twist related protein (T18) (X-twist) gi|2... 36 0.18
gb|EAL33151.1| GA14905-PA [Drosophila pseudoobscura] 36 0.18
gb|AAB48302.1| pinin [Bos taurus] gi|27807293|ref|NP_777143.1| p... 36 0.24
ref|XP_636485.1| hypothetical protein DDB0188170 [Dictyostelium ... 36 0.24
gb|AAN11113.1| CG18362-PD, isoform D [Drosophila melanogaster] g... 35 0.31
gb|AAN11112.1| CG18362-PE, isoform E [Drosophila melanogaster] g... 35 0.31
gb|AAF53989.2| CG18362-PB, isoform B [Drosophila melanogaster] g... 35 0.31
gb|AAN11111.1| CG18362-PC, isoform C [Drosophila melanogaster] g... 35 0.31
gb|AAK20947.1| Mlx interactor beta [Drosophila melanogaster] 35 0.31
gb|AAH74558.1| Twist transcription factor [Xenopus tropicalis] g... 35 0.40
emb|CAH25640.1| twist bHLH transcription factor [Tribolium casta... 35 0.40
ref|ZP_00046654.1| COG1164: Oligoendopeptidase F [Lactobacillus ... 35 0.53
ref|XP_654516.1| hypothetical protein 51.t00024 [Entamoeba histo... 35 0.53
>ref|NP_175399.2| basic helix-loop-helix (bHLH) family protein [Arabidopsis thaliana]
Length = 308
Score = 67.0 bits (162), Expect = 1e-10
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 18 ENHLWGDLPNSDHNLGESSKKRVDTKPLNQNEGINEAEAPVSKKRNWGGVVIRSENNITT 77
E +WG + NSD + G KR++ +PL + E + ++ T
Sbjct: 10 EGFMWG-ISNSDDSGGGC--KRIEKEPLPSHPSHPSPEIQTT--------TVKKGKKRTK 58
Query: 78 GEEKDKKYRDFDHEMHILTERERRKKMRNMFDSLHALLPELPSKVN 123
+K+ + DHE+HI TERERRKKMR+MF LHALLP+LP K +
Sbjct: 59 RNDKNHEEESPDHEIHIWTERERRKKMRDMFSKLHALLPQLPPKAD 104
>pir||D96534 Hypothetical protein [imported] - Arabidopsis thaliana
gi|10120433|gb|AAG13058.1| Hypothetical protein
[Arabidopsis thaliana]
Length = 300
Score = 67.0 bits (162), Expect = 1e-10
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 11/106 (10%)
Query: 18 ENHLWGDLPNSDHNLGESSKKRVDTKPLNQNEGINEAEAPVSKKRNWGGVVIRSENNITT 77
E +WG + NSD + G KR++ +PL + E + ++ T
Sbjct: 10 EGFMWG-ISNSDDSGGGC--KRIEKEPLPSHPSHPSPEIQTT--------TVKKGKKRTK 58
Query: 78 GEEKDKKYRDFDHEMHILTERERRKKMRNMFDSLHALLPELPSKVN 123
+K+ + DHE+HI TERERRKKMR+MF LHALLP+LP K +
Sbjct: 59 RNDKNHEEESPDHEIHIWTERERRKKMRDMFSKLHALLPQLPPKAD 104
>emb|CAD41011.2| OSJNBa0042L16.10 [Oryza sativa (japonica cultivar-group)]
gi|50882044|ref|NP_910118.2| OSJNBa0042L16.10 [Oryza
sativa (japonica cultivar-group)]
Length = 333
Score = 59.7 bits (143), Expect = 2e-08
Identities = 26/46 (56%), Positives = 33/46 (71%)
Query: 81 KDKKYRDFDHEMHILTERERRKKMRNMFDSLHALLPELPSKVNSFS 126
K K D +H +HI TERERRKKM+NMF +LH LLP++P K + S
Sbjct: 100 KGKNAMDMEHALHIWTERERRKKMKNMFSTLHGLLPKIPGKTDKAS 145
>ref|XP_466126.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|46390751|dbj|BAD16259.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 327
Score = 39.7 bits (91), Expect = 0.016
Identities = 17/30 (56%), Positives = 22/30 (72%)
Query: 92 MHILTERERRKKMRNMFDSLHALLPELPSK 121
MHI ERERR+K++NMF L L+P L +K
Sbjct: 94 MHIFAERERRRKIKNMFTDLRDLVPSLTNK 123
>ref|NP_989464.1| transcription factor BMAL2 [Gallus gallus]
gi|19773560|gb|AAL98707.1| BMAL2 [Gallus gallus]
Length = 622
Score = 37.4 bits (85), Expect = 0.081
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 42 TKPLNQNEGINEAEAPVSKKR----NWGGVVIRSENNITTGEEKDKKYRDFDHEMHILTE 97
TKP + + E P +K N V + + +E+ K +DF E H TE
Sbjct: 43 TKPATTSFNNSVVEIPRKRKGSDSDNQDTVEVDGDPQKRNEDEEHLKIKDF-REAHSQTE 101
Query: 98 RERRKKMRNMFDSLHALLPE 117
+ RR KM N+ + L A++P+
Sbjct: 102 KRRRDKMNNLIEELSAMIPQ 121
>ref|XP_394429.2| PREDICTED: similar to GA14905-PA [Apis mellifera]
Length = 1022
Score = 37.4 bits (85), Expect = 0.081
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 78 GEEKDKKYRDFDHEMHILTERERRKKMRNMFDSLHALLPELPSKVNS 124
GE + +Y++ HI E++RR ++N FD LH+L+P+L N+
Sbjct: 808 GETERGQYKEQRRVGHIHAEQKRRYNIKNGFDMLHSLIPQLNQNPNT 854
>ref|XP_553677.1| ENSANGP00000027226 [Anopheles gambiae str. PEST]
gi|55236022|gb|EAL39207.1| ENSANGP00000027226 [Anopheles
gambiae str. PEST]
Length = 102
Score = 37.0 bits (84), Expect = 0.11
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 93 HILTERERRKKMRNMFDSLHALLPELPSKVNSFSSSI 129
HI E++RR ++N FD+LH+L+P+L N+ S S+
Sbjct: 64 HIHAEQKRRYNIKNGFDTLHSLIPQLQQNPNAKSRSM 100
>sp|P13903|TWIST_XENLA Twist related protein (T18) (X-twist) gi|214946|gb|AAA50008.1| Xtwi
protein
Length = 166
Score = 36.2 bits (82), Expect = 0.18
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 7/96 (7%)
Query: 25 LPNSDHNLGESSKKRVDTKPLNQNEGINEAEAPVSKKRNWGGVVIRSENNITTGEEKDKK 84
L NS+ L + KR K + + + ++P+S KRN + + T + +
Sbjct: 16 LSNSEEELDKQQSKRGCRKRRSARKSPEDPDSPISVKRN-------KKASSTGSSPQSFE 68
Query: 85 YRDFDHEMHILTERERRKKMRNMFDSLHALLPELPS 120
M + ER+R + + F SL ++P LPS
Sbjct: 69 ELQSQRVMANVRERQRTQSLNEAFSSLRKIIPTLPS 104
>gb|EAL33151.1| GA14905-PA [Drosophila pseudoobscura]
Length = 992
Score = 36.2 bits (82), Expect = 0.18
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 93 HILTERERRKKMRNMFDSLHALLPELPSKVNS 124
HI E++RR ++N FD+LHAL+P+L N+
Sbjct: 790 HIHAEQKRRYNIKNGFDTLHALIPQLQQNPNA 821
>gb|AAB48302.1| pinin [Bos taurus] gi|27807293|ref|NP_777143.1| pinin, desmosome
associated protein [Bos taurus]
Length = 703
Score = 35.8 bits (81), Expect = 0.24
Identities = 22/90 (24%), Positives = 45/90 (49%), Gaps = 6/90 (6%)
Query: 35 SSKKRVDTKPLNQNEGINEAEAPVSKKRNWG---GVVIRSENNITTGEEKDKKYRDFDHE 91
+SK+R +PL Q++ +E E P +G G + + + T E+ K+ ++ + +
Sbjct: 119 TSKERSTERPLFQDQNTDEKETPERPGPIFGLLMGTLQKFKQESTVATERQKRRQEIEQK 178
Query: 92 MHILTERERRK---KMRNMFDSLHALLPEL 118
+ + E ER++ + R +F+ A EL
Sbjct: 179 LEVQAEEERKQVENERRELFEERRAKQTEL 208
>ref|XP_636485.1| hypothetical protein DDB0188170 [Dictyostelium discoideum]
gi|60464865|gb|EAL62981.1| hypothetical protein
DDB0188170 [Dictyostelium discoideum]
Length = 1186
Score = 35.8 bits (81), Expect = 0.24
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 38 KRVDTKPLNQNEGINEAEAPVSKKRNWGGVVIRSENNITTGEEKDKKYRDFD---HEMHI 94
++ D K + + E E+E +K N VVI+ E N+ EEK +K + + E+
Sbjct: 469 EKKDNKEI-EKEKEKESEKEFVEKVNQEKVVIKREKNVEKEEEKLEKEIETEKEKEEIET 527
Query: 95 LTERERRKKMRNMFDSLHALL--PELPSKVNSFSSSISS 131
+ E+E K+ + + L+ PEL V++ SSS SS
Sbjct: 528 VKEKETEKEKEKEKEKVKELIVSPELSQPVSTSSSSSSS 566
>gb|AAN11113.1| CG18362-PD, isoform D [Drosophila melanogaster]
gi|24585639|ref|NP_724328.1| CG18362-PD, isoform D
[Drosophila melanogaster] gi|13383370|gb|AAK20948.1| Mlx
interactor gamma [Drosophila melanogaster]
Length = 836
Score = 35.4 bits (80), Expect = 0.31
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 93 HILTERERRKKMRNMFDSLHALLPELPSKVNS 124
HI E++RR ++N FD+LHAL+P+L N+
Sbjct: 633 HIHAEQKRRYNIKNGFDTLHALIPQLQLNPNA 664
>gb|AAN11112.1| CG18362-PE, isoform E [Drosophila melanogaster]
gi|24585637|ref|NP_724327.1| CG18362-PE, isoform E
[Drosophila melanogaster]
Length = 925
Score = 35.4 bits (80), Expect = 0.31
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 93 HILTERERRKKMRNMFDSLHALLPELPSKVNS 124
HI E++RR ++N FD+LHAL+P+L N+
Sbjct: 722 HIHAEQKRRYNIKNGFDTLHALIPQLQLNPNA 753
>gb|AAF53989.2| CG18362-PB, isoform B [Drosophila melanogaster]
gi|22947000|gb|AAF53988.2| CG18362-PA, isoform A
[Drosophila melanogaster] gi|24585633|ref|NP_724326.1|
CG18362-PA, isoform A [Drosophila melanogaster]
gi|24585635|ref|NP_610105.2| CG18362-PB, isoform B
[Drosophila melanogaster] gi|13383366|gb|AAK20946.1| Mlx
interactor alpha [Drosophila melanogaster]
Length = 1119
Score = 35.4 bits (80), Expect = 0.31
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 93 HILTERERRKKMRNMFDSLHALLPELPSKVNS 124
HI E++RR ++N FD+LHAL+P+L N+
Sbjct: 916 HIHAEQKRRYNIKNGFDTLHALIPQLQLNPNA 947
>gb|AAN11111.1| CG18362-PC, isoform C [Drosophila melanogaster]
gi|24585631|ref|NP_724325.1| CG18362-PC, isoform C
[Drosophila melanogaster]
Length = 1070
Score = 35.4 bits (80), Expect = 0.31
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 93 HILTERERRKKMRNMFDSLHALLPELPSKVNS 124
HI E++RR ++N FD+LHAL+P+L N+
Sbjct: 867 HIHAEQKRRYNIKNGFDTLHALIPQLQLNPNA 898
>gb|AAK20947.1| Mlx interactor beta [Drosophila melanogaster]
Length = 1062
Score = 35.4 bits (80), Expect = 0.31
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 93 HILTERERRKKMRNMFDSLHALLPELPSKVNS 124
HI E++RR ++N FD+LHAL+P+L N+
Sbjct: 859 HIHAEQKRRYNIKNGFDTLHALIPQLQLNPNA 890
>gb|AAH74558.1| Twist transcription factor [Xenopus tropicalis]
gi|5825551|gb|AAD53290.1| twist transcription factor
[Xenopus tropicalis] gi|45361683|ref|NP_989415.1| twist
transcription factor [Xenopus tropicalis]
Length = 166
Score = 35.0 bits (79), Expect = 0.40
Identities = 23/96 (23%), Positives = 42/96 (42%), Gaps = 7/96 (7%)
Query: 25 LPNSDHNLGESSKKRVDTKPLNQNEGINEAEAPVSKKRNWGGVVIRSENNITTGEEKDKK 84
L NS+ L KR K + + + ++P+S KRN +++ T + +
Sbjct: 16 LSNSEEELDRQHSKRGCRKKRSTRKSPEDPDSPISVKRN-------KKSSSTGSSPQSFE 68
Query: 85 YRDFDHEMHILTERERRKKMRNMFDSLHALLPELPS 120
M + ER+R + + F +L ++P LPS
Sbjct: 69 ELQSQRVMANVRERQRTQSLNEAFAALRKIIPTLPS 104
>emb|CAH25640.1| twist bHLH transcription factor [Tribolium castaneum]
Length = 193
Score = 35.0 bits (79), Expect = 0.40
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 10/78 (12%)
Query: 53 EAEAPVSKKRNWGGV---VIRSENNITTGEEKDKK-----YRDFDHE--MHILTERERRK 102
+ EAPV K R++G + E N G+ K ++ + D H+ M + ER+R +
Sbjct: 51 DEEAPVLKSRSFGRKRKSISSDEENSFQGKHKSRRKAPQSFEDIQHQRVMANVRERQRTQ 110
Query: 103 KMRNMFDSLHALLPELPS 120
+ F SL +P +PS
Sbjct: 111 SLNEAFASLRKSIPTMPS 128
>ref|ZP_00046654.1| COG1164: Oligoendopeptidase F [Lactobacillus gasseri]
Length = 603
Score = 34.7 bits (78), Expect = 0.53
Identities = 26/107 (24%), Positives = 51/107 (47%), Gaps = 4/107 (3%)
Query: 25 LPNSDHNLGESSKKRVDTKPLNQNEGINEAEAPVSKKRNWGGVVIRSENNITTGEEKDKK 84
L N H L + ++KR T P N+ + I +A + N V+ S+ +++D +
Sbjct: 132 LENYRHRLEQITQKRPHTLPANEEKIIADAGDAMGTSANTFNVLTNSDMEYGYVQDEDGE 191
Query: 85 YRDFDHEMH-ILTERERRKKMRNMFDSLHALLPELPSKVNSFSSSIS 130
++ +L + + RK +N FD ++A + NS +S++S
Sbjct: 192 MVQLSDGLYSLLIQSQDRKVRKNAFDVMYASYGQFE---NSLASTLS 235
>ref|XP_654516.1| hypothetical protein 51.t00024 [Entamoeba histolytica HM-1:IMSS]
gi|67465950|ref|XP_649133.1| hypothetical protein
340.t00004 [Entamoeba histolytica HM-1:IMSS]
gi|56471569|gb|EAL49128.1| hypothetical protein
51.t00024 [Entamoeba histolytica HM-1:IMSS]
gi|56465497|gb|EAL43747.1| hypothetical protein
340.t00004 [Entamoeba histolytica HM-1:IMSS]
Length = 451
Score = 34.7 bits (78), Expect = 0.53
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 8 DQGVQTGFIWENHLWGDLPNSDHNLGESSKKRVDTKPLNQNEGINEAEAPVSKKRNWGGV 67
D G Q+ I + + PN+D+ L +S + + K N I E E+ SKK
Sbjct: 154 DSGDQSNTIEDKMSFNQFPNNDNILQKSQEGSIHHKSDNLLSQIEEYESIESKKEYKSKE 213
Query: 68 VIRSENNITTGEEKDKKYRDFDHEMHILTERERRKK 103
+ SE N T +E+ + ++ IL E+ + KK
Sbjct: 214 IDGSEENDKTEKEEGEWMDKETNKNPILPEQPKEKK 249
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.310 0.129 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 235,160,780
Number of Sequences: 2540612
Number of extensions: 9668172
Number of successful extensions: 21236
Number of sequences better than 10.0: 150
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 21151
Number of HSP's gapped (non-prelim): 162
length of query: 131
length of database: 863,360,394
effective HSP length: 107
effective length of query: 24
effective length of database: 591,514,910
effective search space: 14196357840
effective search space used: 14196357840
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 67 (30.4 bits)
Medicago: description of AC148528.1