BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148483.5 + phase: 0 /pseudo
         (281 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAF79683.1| F9C16.17 [Arabidopsis thaliana] gi|25405863|pir||...    37  0.63
gb|AAF79665.1| F9C16.13 [Arabidopsis thaliana] gi|25405860|pir||...    34  5.3
emb|CAB75932.1| putative protein [Arabidopsis thaliana] gi|11278...    33  6.9
ref|NP_765943.1| ABC transporter (ATP-binding protein) [Staphylo...    33  6.9

>gb|AAF79683.1| F9C16.17 [Arabidopsis thaliana] gi|25405863|pir||H96503 protein
           F9C16.17 [imported] - Arabidopsis thaliana
          Length = 873

 Score = 37.0 bits (84), Expect = 0.63
 Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 1/52 (1%)

Query: 224 IEVVSILLQSSLNFVDQTKSEGNLLHLTHLNKMVLRTERKNRTLKNMVRSML 275
           I VV+  + SS  F    +   N+LH  HLN   +  ERKNRTL+ M R+ML
Sbjct: 259 IMVVNFRMSSSTRFAMIRELFINILHQEHLNNNGV-VERKNRTLQEMARAML 309


>gb|AAF79665.1| F9C16.13 [Arabidopsis thaliana] gi|25405860|pir||F96503 protein
           F9C16.13 [imported] - Arabidopsis thaliana
          Length = 1172

 Score = 33.9 bits (76), Expect = 5.3
 Identities = 20/45 (44%), Positives = 27/45 (59%), Gaps = 1/45 (2%)

Query: 231 LQSSLNFVDQTKSEGNLLHLTHLNKMVLRTERKNRTLKNMVRSML 275
           + SS +F    +   N+LH  HLN   +  ERKNRTL+ M R+ML
Sbjct: 613 MSSSTSFAMIRELFINILHQEHLNNNGV-VERKNRTLQEMARAML 656


>emb|CAB75932.1| putative protein [Arabidopsis thaliana] gi|11278365|pir||T47841
           hypothetical protein T2O9.150 - Arabidopsis thaliana
          Length = 1339

 Score = 33.5 bits (75), Expect = 6.9
 Identities = 21/67 (31%), Positives = 31/67 (45%)

Query: 27  DLETVYLVLDNFSRRIEQLCLRKILENVYHDERGIVMSTQMSTNRMFMISAPIIVPESLK 86
           +L    L L     R   + +R     VYH  +G +M T MS NRMF + A      SL 
Sbjct: 363 ELRNNLLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASKPQKNSLC 422

Query: 87  LKNVKML 93
           L+  +++
Sbjct: 423 LQTEEVM 429


>ref|NP_765943.1| ABC transporter (ATP-binding protein) [Staphylococcus epidermidis
           ATCC 12228] gi|27316856|gb|AAO06031.1| ABC transporter
           (ATP-binding protein) [Staphylococcus epidermidis ATCC
           12228]
          Length = 280

 Score = 33.5 bits (75), Expect = 6.9
 Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 10/61 (16%)

Query: 49  KILENVYHDERGIVMST-------QMSTNRMFMISAPIIVPESLKLKNVKMLRYGIIDMA 101
           +ILE+   D+R I++S+       Q++T  +FM    II+ ES   K V + +YGIID  
Sbjct: 172 EILEDYLGDDRAILISSHISEDIEQLATQLVFMRDGRIILKES---KEVLLSQYGIIDQP 228

Query: 102 I 102
           +
Sbjct: 229 V 229


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.355    0.157    0.501 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 345,470,427
Number of Sequences: 2540612
Number of extensions: 11297462
Number of successful extensions: 64601
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 64598
Number of HSP's gapped (non-prelim): 5
length of query: 281
length of database: 863,360,394
effective HSP length: 126
effective length of query: 155
effective length of database: 543,243,282
effective search space: 84202708710
effective search space used: 84202708710
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.6 bits)
S2: 74 (33.1 bits)