BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148341.11 - phase: 0
(164 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD34458.1| Skp1 [Medicago sativa] 253 1e-66
gb|AAT99735.1| SKP1 [Nicotiana tabacum] 239 2e-62
gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii] 228 3e-59
emb|CAA75117.1| fimbriata-associated protein [Antirrhinum majus]... 228 6e-59
gb|AAO85510.1| SKP1 [Nicotiana benthamiana] 226 1e-58
dbj|BAB85607.1| kinetochore protein [Brassica juncea] 226 1e-58
gb|AAT12490.1| Skp1/Ask1-like protein [Zantedeschia hybrid culti... 226 1e-58
dbj|BAB85608.1| kinetochore protein [Brassica juncea] 225 4e-58
dbj|BAB85605.1| kinetochore protein [Brassica juncea] 225 4e-58
emb|CAA75118.1| fimbriata-associated protein [Antirrhinum majus]... 224 5e-58
dbj|BAB08452.1| UIP2 [Arabidopsis thaliana] gi|28466911|gb|AAO44... 224 7e-58
gb|AAC63110.1| UIP2 [Arabidopsis thaliana] 224 7e-58
dbj|BAB85603.1| kinetochore protein [Brassica juncea] 222 3e-57
gb|AAM45019.1| putative SKP1/ASK1 protein At1 [Arabidopsis thali... 221 4e-57
dbj|BAB85606.1| kinetochore protein [Brassica juncea] 220 9e-57
emb|CAB85491.1| putative kinetochore protein [Hordeum vulgare su... 219 2e-56
emb|CAE53885.1| putative SKP1 protein [Triticum aestivum] 218 4e-56
gb|AAT09201.1| skp1 protein [Oryza sativa (japonica cultivar-gro... 217 8e-56
gb|AAP79890.1| SKP1/ASK1-like protein [Triticum aestivum] 215 3e-55
gb|AAM19990.1| At1g20140/T20H2_8 [Arabidopsis thaliana] gi|87789... 209 3e-53
>gb|AAD34458.1| Skp1 [Medicago sativa]
Length = 153
Score = 253 bits (646), Expect = 1e-66
Identities = 122/153 (79%), Positives = 142/153 (92%), Gaps = 1/153 (0%)
Query: 11 TKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCKK 70
T+KITLKSSD ETFE+++AVALESQTIKH+I+D+CAD SGIPLPNVT KILA VIE+CKK
Sbjct: 2 TRKITLKSSDGETFEVDEAVALESQTIKHMIEDDCAD-SGIPLPNVTSKILAKVIEYCKK 60
Query: 71 HVDATSSDEKPSEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLTCKTVADMIKG 130
HVDA ++++KP+EDE+ WD+EFVKVDQ TLFDLILAANYLNIKSLLDLTC+TVADMIKG
Sbjct: 61 HVDAAAAEDKPNEDELKSWDSEFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMIKG 120
Query: 131 RTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
+TPEEIRKTFNI ND++PEEEEEVR E QWAF+
Sbjct: 121 KTPEEIRKTFNIKNDFSPEEEEEVRRENQWAFE 153
>gb|AAT99735.1| SKP1 [Nicotiana tabacum]
Length = 155
Score = 239 bits (611), Expect = 2e-62
Identities = 118/155 (76%), Positives = 139/155 (89%), Gaps = 1/155 (0%)
Query: 9 TATKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHC 68
+++K I LKSSD ETFE+E+AVALESQTIKH+I+D+CAD S IPLPNVT KILA VIE+C
Sbjct: 2 SSSKMIVLKSSDGETFEVEEAVALESQTIKHMIEDDCADTS-IPLPNVTSKILAKVIEYC 60
Query: 69 KKHVDATSSDEKPSEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLTCKTVADMI 128
K+HVDAT +++K SEDE+ +D++FVKVDQ TLFDLILAANYLNIKSLLDLTC+TVADMI
Sbjct: 61 KRHVDATKTEDKASEDELKGFDSDFVKVDQATLFDLILAANYLNIKSLLDLTCQTVADMI 120
Query: 129 KGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
KG+TPEEIRKTFNI ND+TPEEEEEVR E WAF+
Sbjct: 121 KGKTPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 155
>gb|AAC63273.1| SKP1-like protein [Nicotiana clevelandii]
Length = 153
Score = 228 bits (582), Expect = 3e-59
Identities = 114/153 (74%), Positives = 134/153 (87%), Gaps = 2/153 (1%)
Query: 12 KKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCKKH 71
K I L+SSD ETFE+E++VALESQTIKH+I+D+CAD S IPLPNVT KILA VIE+CK+H
Sbjct: 2 KMIVLRSSDGETFEVEESVALESQTIKHMIEDDCADTS-IPLPNVTSKILAKVIEYCKRH 60
Query: 72 VDATS-SDEKPSEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLTCKTVADMIKG 130
VDA S +++K ED++ +D +FVKVDQ TLFDLILAANYLNIKSLLDLTC+TVADMIKG
Sbjct: 61 VDAASKTEDKAVEDDLKAFDADFVKVDQSTLFDLILAANYLNIKSLLDLTCQTVADMIKG 120
Query: 131 RTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
+TPEEIRKTFNI ND+TPEEEEEVR E WAF+
Sbjct: 121 KTPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 153
>emb|CAA75117.1| fimbriata-associated protein [Antirrhinum majus]
gi|7489299|pir||T17030 fimbriata-associated protein -
garden snapdragon (fragment)
Length = 161
Score = 228 bits (580), Expect = 6e-59
Identities = 115/160 (71%), Positives = 139/160 (86%), Gaps = 8/160 (5%)
Query: 11 TKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCKK 70
TKKITL+SSD E FE+E+++ALESQTIKH+I+D+CAD+ IPLPNVTGKIL+ VIE+CK+
Sbjct: 3 TKKITLRSSDGEVFEVEESLALESQTIKHMIEDDCADNV-IPLPNVTGKILSKVIEYCKR 61
Query: 71 HVDATSS--DEK-----PSEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLTCKT 123
HVDA ++ D+K S+DE+ +D +FVKVDQ TLFDLILAANYLNIK+LLDLTC+T
Sbjct: 62 HVDAAAAKADDKLASTGTSDDELKAFDADFVKVDQATLFDLILAANYLNIKTLLDLTCQT 121
Query: 124 VADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
VADMIKG+TPEEIRKTFNI ND+TPEEEEEVR E QWAF+
Sbjct: 122 VADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 161
>gb|AAO85510.1| SKP1 [Nicotiana benthamiana]
Length = 153
Score = 226 bits (577), Expect = 1e-58
Identities = 113/153 (73%), Positives = 133/153 (86%), Gaps = 2/153 (1%)
Query: 12 KKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCKKH 71
K I L+SSD ETFE+E++VALESQTIKH+I+D+CAD S IPLPNVT KILA VIE+CK+H
Sbjct: 2 KMIVLRSSDGETFEVEESVALESQTIKHMIEDDCADTS-IPLPNVTSKILAKVIEYCKRH 60
Query: 72 VDATS-SDEKPSEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLTCKTVADMIKG 130
VDA S +++K ED++ +D +FVKVDQ TLFDLILAANYLNIK LLDLTC+TVADMIKG
Sbjct: 61 VDAASKTEDKAVEDDLKAFDADFVKVDQSTLFDLILAANYLNIKRLLDLTCQTVADMIKG 120
Query: 131 RTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
+TPEEIRKTFNI ND+TPEEEEEVR E WAF+
Sbjct: 121 KTPEEIRKTFNIKNDFTPEEEEEVRRENAWAFE 153
>dbj|BAB85607.1| kinetochore protein [Brassica juncea]
Length = 160
Score = 226 bits (577), Expect = 1e-58
Identities = 111/160 (69%), Positives = 135/160 (84%), Gaps = 7/160 (4%)
Query: 10 ATKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCK 69
+TKKI LKSSD E+FE+++AVALESQTI H+++D+C D+ GIPLPNVT KILA VIE+CK
Sbjct: 2 STKKIVLKSSDGESFEVDEAVALESQTIAHMVEDDCVDN-GIPLPNVTSKILAKVIEYCK 60
Query: 70 KHVDATSSDEKP------SEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLTCKT 123
KHVDA +S + S+D++ WD EF+K+DQ TLF+LILAANYLNIK+LLDLTC+T
Sbjct: 61 KHVDAAASKTEAVDGGASSDDDLKAWDAEFMKIDQATLFELILAANYLNIKNLLDLTCQT 120
Query: 124 VADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
VADMIKG+TPEEIR TFNI ND+TPEEEEEVR E QWAF+
Sbjct: 121 VADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
>gb|AAT12490.1| Skp1/Ask1-like protein [Zantedeschia hybrid cultivar]
Length = 167
Score = 226 bits (577), Expect = 1e-58
Identities = 114/168 (67%), Positives = 140/168 (82%), Gaps = 6/168 (3%)
Query: 1 MSDGVESSTATKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKI 60
M+ ++ A+KK+TLKSSD E FE+E+ VA+ESQTI++LI+D+C D G+PLPNVTG+I
Sbjct: 1 MAADAAAAGASKKLTLKSSDGEVFEVEETVAMESQTIRNLIEDDCTAD-GVPLPNVTGRI 59
Query: 61 LAMVIEHCKKHVD--ATSSDE---KPSEDEINKWDTEFVKVDQDTLFDLILAANYLNIKS 115
LA VIE CKKHV+ A +DE + +++E+ WD +FVKVDQ TLFDLILAANYLNIKS
Sbjct: 60 LAKVIEFCKKHVEIAALKADEGVDRAADEELKVWDADFVKVDQTTLFDLILAANYLNIKS 119
Query: 116 LLDLTCKTVADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
LLDLTC+TVADMIKG+TPEEIRKTFNI ND+TPEEEEEVR E QWAF+
Sbjct: 120 LLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 167
>dbj|BAB85608.1| kinetochore protein [Brassica juncea]
Length = 160
Score = 225 bits (573), Expect = 4e-58
Identities = 109/160 (68%), Positives = 135/160 (84%), Gaps = 7/160 (4%)
Query: 10 ATKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCK 69
+TKKI LKSSD E+FE+++AVALESQTI H+++D+C D+ G+PLPNVT KILA VIE+CK
Sbjct: 2 STKKIVLKSSDGESFEVDEAVALESQTIAHMVEDDCVDN-GVPLPNVTSKILAKVIEYCK 60
Query: 70 KHVDATSSDEKP------SEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLTCKT 123
KHVDA +S + S+D++ WD EF+K+DQ TLF+LILAANYLNIK+LLDLTC+T
Sbjct: 61 KHVDAAASKSEAVDGGGSSDDDLKAWDAEFMKIDQATLFELILAANYLNIKNLLDLTCQT 120
Query: 124 VADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
VADMIKG+TPEEIR TFNI ND++PEEEEEVR E QWAF+
Sbjct: 121 VADMIKGKTPEEIRTTFNIKNDFSPEEEEEVRRENQWAFE 160
>dbj|BAB85605.1| kinetochore protein [Brassica juncea]
Length = 160
Score = 225 bits (573), Expect = 4e-58
Identities = 109/160 (68%), Positives = 135/160 (84%), Gaps = 7/160 (4%)
Query: 10 ATKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCK 69
+TKKI LKSSD E+FE+++AVALESQTI H+++D+C D+ G+PLPNVT KILA VIE+CK
Sbjct: 2 STKKIVLKSSDGESFEVDEAVALESQTIAHMVEDDCVDN-GVPLPNVTSKILAKVIEYCK 60
Query: 70 KHVDATSSDEKP------SEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLTCKT 123
KHVDA +S + S+D++ WD EF+K+DQ TLF+LILAANYLNIK+LLDLTC+T
Sbjct: 61 KHVDAVASKSEAVDGGGSSDDDLKAWDAEFMKIDQATLFELILAANYLNIKNLLDLTCQT 120
Query: 124 VADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
VADMIKG+TPEEIR TFNI ND++PEEEEEVR E QWAF+
Sbjct: 121 VADMIKGKTPEEIRTTFNIKNDFSPEEEEEVRRENQWAFE 160
>emb|CAA75118.1| fimbriata-associated protein [Antirrhinum majus]
gi|7489300|pir||T17031 fimbriata-associated protein 2 -
garden snapdragon (fragment)
Length = 165
Score = 224 bits (572), Expect = 5e-58
Identities = 114/164 (69%), Positives = 140/164 (84%), Gaps = 8/164 (4%)
Query: 7 SSTATKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIE 66
S A+KKITL+SSD E FE+++A+AL SQTIKH+I+D+CAD+ IPLPNVTGKIL+ VIE
Sbjct: 3 SDNASKKITLRSSDGEVFEVDEAIALLSQTIKHMIEDDCADNV-IPLPNVTGKILSKVIE 61
Query: 67 HCKKHVDATS--SDEKPS-----EDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDL 119
+CK+HVDA + S+EK + +D++ +D +FVKVDQ TLFDLILAANYLNIK+LLDL
Sbjct: 62 YCKRHVDADAAKSEEKVAAAAAGDDDLKAFDADFVKVDQATLFDLILAANYLNIKTLLDL 121
Query: 120 TCKTVADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
TC+TVADMIKG+TPEEIRKTFNI ND+TPEEEEEVR E QWAF+
Sbjct: 122 TCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 165
>dbj|BAB08452.1| UIP2 [Arabidopsis thaliana] gi|28466911|gb|AAO44064.1| At5g42190
[Arabidopsis thaliana] gi|3068809|gb|AAC14445.1| Skp1
homolog [Arabidopsis thaliana]
gi|18422184|ref|NP_568603.1| E3 ubiquitin ligase SCF
complex subunit SKP1/ASK1 (At2) / UFO-binding protein
(UIP2) [Arabidopsis thaliana]
Length = 171
Score = 224 bits (571), Expect = 7e-58
Identities = 112/171 (65%), Positives = 134/171 (77%), Gaps = 17/171 (9%)
Query: 9 TATKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHC 68
+ +KITLKSSD E FEI++AVALESQTIKH+I+D+C D+ GIPLPNVT KIL+ VIE+C
Sbjct: 2 STVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDN-GIPLPNVTSKILSKVIEYC 60
Query: 69 KKHVDATSSDEKP----------------SEDEINKWDTEFVKVDQDTLFDLILAANYLN 112
K+HV+A E S++++ WD+EF+KVDQ TLFDLILAANYLN
Sbjct: 61 KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 120
Query: 113 IKSLLDLTCKTVADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
IK LLDLTC+TVADMIKG+TPEEIRKTFNI ND+TPEEEEEVR E QWAF+
Sbjct: 121 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 171
>gb|AAC63110.1| UIP2 [Arabidopsis thaliana]
Length = 172
Score = 224 bits (571), Expect = 7e-58
Identities = 112/171 (65%), Positives = 134/171 (77%), Gaps = 17/171 (9%)
Query: 9 TATKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHC 68
+ +KITLKSSD E FEI++AVALESQTIKH+I+D+C D+ GIPLPNVT KIL+ VIE+C
Sbjct: 3 STVRKITLKSSDGENFEIDEAVALESQTIKHMIEDDCTDN-GIPLPNVTSKILSKVIEYC 61
Query: 69 KKHVDATSSDEKP----------------SEDEINKWDTEFVKVDQDTLFDLILAANYLN 112
K+HV+A E S++++ WD+EF+KVDQ TLFDLILAANYLN
Sbjct: 62 KRHVEAAEKSETTADAAAATTTTTVASGSSDEDLKTWDSEFIKVDQGTLFDLILAANYLN 121
Query: 113 IKSLLDLTCKTVADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
IK LLDLTC+TVADMIKG+TPEEIRKTFNI ND+TPEEEEEVR E QWAF+
Sbjct: 122 IKGLLDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEVRRENQWAFE 172
>dbj|BAB85603.1| kinetochore protein [Brassica juncea]
Length = 161
Score = 222 bits (565), Expect = 3e-57
Identities = 107/161 (66%), Positives = 135/161 (83%), Gaps = 8/161 (4%)
Query: 10 ATKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCK 69
+TKKI LKSSD+E+FE+++AVA ESQT+ H+++D+C D+ GIPLPNVTGKILA VIE+CK
Sbjct: 2 STKKIVLKSSDDESFEVDEAVARESQTLAHMVEDDCTDN-GIPLPNVTGKILAKVIEYCK 60
Query: 70 KHVDA-------TSSDEKPSEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLTCK 122
KHVDA T+ PS++++ WD EF+ +DQ TLF+LILAANYLNIK+LLDLTC+
Sbjct: 61 KHVDAAAAKTEATADGGAPSDEDLKAWDAEFMNIDQATLFELILAANYLNIKNLLDLTCQ 120
Query: 123 TVADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
TVADMIKG+TP+EIR TFNI ND++PEEEEEVR E QWAF+
Sbjct: 121 TVADMIKGKTPDEIRTTFNIKNDFSPEEEEEVRRENQWAFE 161
>gb|AAM45019.1| putative SKP1/ASK1 protein At1 [Arabidopsis thaliana]
gi|19424110|gb|AAL87354.1| putative SKP1/ASK1 protein
At1 [Arabidopsis thaliana] gi|6721107|gb|AAF26761.1|
T4O12.17 [Arabidopsis thaliana]
gi|3068807|gb|AAC14444.1| Skp1 homolog [Arabidopsis
thaliana] gi|18410982|ref|NP_565123.1| E3 ubiquitin
ligase SCF complex subunit SKP1/ASK1 (At1) [Arabidopsis
thaliana] gi|3719209|gb|AAC63109.1| UIP1 [Arabidopsis
thaliana] gi|11291720|pir||T51309 Skp1 homolog
[imported] - Arabidopsis thaliana
gi|1432083|gb|AAB17535.1| homolog to Skp1p, an
evolutionarily conserved kinetochore protein in budding
yeast [Arabidopsis thaliana]
Length = 160
Score = 221 bits (564), Expect = 4e-57
Identities = 107/160 (66%), Positives = 134/160 (82%), Gaps = 7/160 (4%)
Query: 10 ATKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCK 69
+ KKI LKSSD E+FE+E+AVALESQTI H+++D+C D+ G+PLPNVT KILA VIE+CK
Sbjct: 2 SAKKIVLKSSDGESFEVEEAVALESQTIAHMVEDDCVDN-GVPLPNVTSKILAKVIEYCK 60
Query: 70 KHVDATSSDEKP------SEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLTCKT 123
+HV+A +S + S+D++ WD +F+K+DQ TLF+LILAANYLNIK+LLDLTC+T
Sbjct: 61 RHVEAAASKAEAVEGAATSDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQT 120
Query: 124 VADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
VADMIKG+TPEEIR TFNI ND+TPEEEEEVR E QWAF+
Sbjct: 121 VADMIKGKTPEEIRTTFNIKNDFTPEEEEEVRRENQWAFE 160
>dbj|BAB85606.1| kinetochore protein [Brassica juncea]
Length = 161
Score = 220 bits (561), Expect = 9e-57
Identities = 107/161 (66%), Positives = 135/161 (83%), Gaps = 8/161 (4%)
Query: 10 ATKKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCK 69
+TKKI LKSSD E+FE+++AVA ESQT+ H+++D+C ++ GIPLPNVT KILA VIE+CK
Sbjct: 2 STKKIVLKSSDGESFEVDEAVARESQTLAHMVEDDCIEN-GIPLPNVTSKILAKVIEYCK 60
Query: 70 KHVDATSSDEK-------PSEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLTCK 122
KHVDA ++ + S+D++ WDTEF+K+DQ TLF+LILAANYLNIK+LLDLTC+
Sbjct: 61 KHVDAAAAKTEGAVDGAASSDDDLKAWDTEFMKIDQATLFELILAANYLNIKNLLDLTCQ 120
Query: 123 TVADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
TVADMIKG+TPEEIR TFNI ND++PEEEEEVR E QWAF+
Sbjct: 121 TVADMIKGKTPEEIRTTFNIKNDFSPEEEEEVRRENQWAFE 161
>emb|CAB85491.1| putative kinetochore protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 219 bits (559), Expect = 2e-56
Identities = 111/166 (66%), Positives = 129/166 (76%), Gaps = 15/166 (9%)
Query: 12 KKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCKKH 71
K ITLKSSD E FE+E+AVA+ESQTI+H+I+D+CAD+ GIPLPNV KIL+ VIE+C KH
Sbjct: 11 KMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADN-GIPLPNVNSKILSKVIEYCNKH 69
Query: 72 VDATSSDEKPSED--------------EINKWDTEFVKVDQDTLFDLILAANYLNIKSLL 117
V A +D S D ++ WD EFVKVDQ TLFDLILAANYLNIK LL
Sbjct: 70 VQAKPADAGASSDTASAAXGAPAAPAEDLKNWDAEFVKVDQATLFDLILAANYLNIKGLL 129
Query: 118 DLTCKTVADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
DLTC+TVADMIKG+TPEEIRKTFNI ND+TPEEEEE+R E QWAF+
Sbjct: 130 DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 175
>emb|CAE53885.1| putative SKP1 protein [Triticum aestivum]
Length = 174
Score = 218 bits (556), Expect = 4e-56
Identities = 112/166 (67%), Positives = 130/166 (77%), Gaps = 16/166 (9%)
Query: 12 KKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCKKH 71
K ITLKSSD E FE+E+AVA+ESQTI+H+I+D+CAD+ GIPLPNV KIL+ VIE+C KH
Sbjct: 11 KMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADN-GIPLPNVNSKILSKVIEYCNKH 69
Query: 72 VDATSSD--------------EKPSEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSLL 117
V A +D P+ED + WD EFVKVDQ TLFDLILAANYLNIK LL
Sbjct: 70 VQAKPADGAAAAAGASDAAAPTAPAED-LKNWDAEFVKVDQATLFDLILAANYLNIKGLL 128
Query: 118 DLTCKTVADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
DLTC+TVADMIKG+TPEEIRKTFNI ND+TPEEEEE+R E QWAF+
Sbjct: 129 DLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 174
>gb|AAT09201.1| skp1 protein [Oryza sativa (japonica cultivar-group)]
Length = 173
Score = 217 bits (553), Expect = 8e-56
Identities = 109/167 (65%), Positives = 130/167 (77%), Gaps = 16/167 (9%)
Query: 12 KKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCKKH 71
K ITLKSSD E FE+E+AVA+ESQTI+H+I+D+CAD+ GIPLPNV KIL+ VIE+C KH
Sbjct: 8 KMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADN-GIPLPNVNSKILSKVIEYCNKH 66
Query: 72 VDATSSDEK---------------PSEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSL 116
V A ++ PS +++ WD +FVKVDQ TLFDLILAANYLNIK L
Sbjct: 67 VHAAAAAASKAADDAASAAAAVPPPSGEDLKNWDADFVKVDQATLFDLILAANYLNIKGL 126
Query: 117 LDLTCKTVADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
LDLTC+TVADMIKG+TPEEIRKTFNI ND+TPEEEEE+R E QWAF+
Sbjct: 127 LDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 173
>gb|AAP79890.1| SKP1/ASK1-like protein [Triticum aestivum]
Length = 175
Score = 215 bits (548), Expect = 3e-55
Identities = 111/167 (66%), Positives = 129/167 (76%), Gaps = 17/167 (10%)
Query: 12 KKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCKKH 71
K ITLKSSD E FE+E+AVA+ESQTI+H+I+D+CAD+ GIPLPNV KIL+ VIE+C KH
Sbjct: 11 KMITLKSSDGEEFEVEEAVAMESQTIRHMIEDDCADN-GIPLPNVNSKILSKVIEYCNKH 69
Query: 72 VDATSSD---------------EKPSEDEINKWDTEFVKVDQDTLFDLILAANYLNIKSL 116
V A +D P+ED + WD EFVKVDQ TLFDLILAANYLNIK L
Sbjct: 70 VQAKPADGAAAGAGAGASDAAPAAPAED-LKNWDAEFVKVDQATLFDLILAANYLNIKGL 128
Query: 117 LDLTCKTVADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
DLTC+TVADMIKG+TPEEIRKTFNI ND+TPEEEEE+R E QWAF+
Sbjct: 129 PDLTCQTVADMIKGKTPEEIRKTFNIKNDFTPEEEEEIRRENQWAFE 175
>gb|AAM19990.1| At1g20140/T20H2_8 [Arabidopsis thaliana] gi|8778984|gb|AAF79899.1|
Contains similarity to Skp1 mRNA from Medicago sativa
gb|AF135596 and is a member of Skp1 family PF|01466.
[Arabidopsis thaliana] gi|18394828|ref|NP_564105.1| E3
ubiquitin ligase SCF complex subunit, putative
[Arabidopsis thaliana] gi|16648855|gb|AAL25617.1|
At1g20140/T20H2_8 [Arabidopsis thaliana]
gi|25366634|pir||B86335 hypothetical protein T20H2.8 -
Arabidopsis thaliana
Length = 163
Score = 209 bits (531), Expect = 3e-53
Identities = 105/159 (66%), Positives = 127/159 (79%), Gaps = 8/159 (5%)
Query: 12 KKITLKSSDNETFEIEKAVALESQTIKHLIDDNCADDSGIPLPNVTGKILAMVIEHCKKH 71
K I LKSSD E+FEIE+AVA++SQTIKH+I+D+CAD+ GIPLPNVTG ILA VIE+CKKH
Sbjct: 6 KMIILKSSDGESFEIEEAVAVKSQTIKHMIEDDCADN-GIPLPNVTGAILAKVIEYCKKH 64
Query: 72 VDATSSDEKPSE-------DEINKWDTEFVKVDQDTLFDLILAANYLNIKSLLDLTCKTV 124
V+A + + DE+ WD+EFVKVDQ TLFDLILAANYLNI LLDLTCK V
Sbjct: 65 VEAAAEAGGDKDFYGSAENDELKNWDSEFVKVDQPTLFDLILAANYLNIGGLLDLTCKAV 124
Query: 125 ADMIKGRTPEEIRKTFNIINDYTPEEEEEVRSETQWAFD 163
AD ++G+TPE++R FNI NDYTPEEE EVR+E +WAF+
Sbjct: 125 ADQMRGKTPEQMRAHFNIKNDYTPEEEAEVRNENKWAFE 163
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.310 0.129 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 268,033,259
Number of Sequences: 2540612
Number of extensions: 10375192
Number of successful extensions: 25331
Number of sequences better than 10.0: 276
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 24774
Number of HSP's gapped (non-prelim): 286
length of query: 164
length of database: 863,360,394
effective HSP length: 118
effective length of query: 46
effective length of database: 563,568,178
effective search space: 25924136188
effective search space used: 25924136188
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 70 (31.6 bits)
Medicago: description of AC148341.11