BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146854.1 + phase: 0 /pseudo
(1390 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_508076.1| putative protein, with at least 16 transmembran... 62 1e-07
gb|AAA29909.1| ORF 3 51 2e-04
ref|NP_572233.1| CG15780-PA [Drosophila melanogaster] gi|7290595... 50 5e-04
gb|EAK89294.1| hypothetical protein with signal peptide [Cryptos... 47 0.006
pir||E22845 hypothetical protein 4 - Trypanosoma brucei mitochon... 46 0.010
gb|EAL01937.1| hypothetical protein CaO19.11807 [Candida albican... 45 0.013
gb|AAK77584.1| heme maturase [Tetrahymena thermophila] gi|150276... 45 0.017
ref|NP_035065.1| neuropeptide Y receptor Y6 [Mus musculus] gi|24... 45 0.023
ref|NP_852645.1| RNA polymerase beta'' chain [Eimeria tenella] g... 44 0.029
ref|XP_524016.1| PREDICTED: hypothetical protein XP_524016 [Pan ... 44 0.038
ref|NP_764829.1| ComEC late competence protein 3 [Staphylococcus... 44 0.050
ref|YP_188731.1| competence protein ComEC/Rec2, putative [Staphy... 44 0.050
gb|EAL01803.1| hypothetical protein CaO19.4331 [Candida albicans... 44 0.050
ref|XP_499191.1| PREDICTED: hypothetical protein XP_499191 [Homo... 44 0.050
emb|CAE64507.1| Hypothetical protein CBG09235 [Caenorhabditis br... 44 0.050
ref|YP_241650.1| hypothetical protein XC_0549 [Xanthomonas campe... 43 0.086
ref|NP_059365.1| haem lyase [Cyanidioschyzon merolae] gi|7432719... 42 0.19
gb|AAD28358.1| MURF1 [Phytomonas serpens] 42 0.19
emb|CAH83762.1| hypothetical protein PC401526.00.0 [Plasmodium c... 42 0.19
gb|AAM62295.1| putative CPS repeating unit transporter Cps9vK [S... 42 0.19
>ref|NP_508076.1| putative protein, with at least 16 transmembrane domains (XA707)
[Caenorhabditis elegans]
Length = 748
Score = 62.4 bits (150), Expect = 1e-07
Identities = 101/401 (25%), Positives = 182/401 (45%), Gaps = 59/401 (14%)
Query: 253 NLLRDHLNLRTIQDIALFAIGIITQWIFVTRCMVIPMQIN---LMLLQMLLLMKAFLILR 309
+++R H+N+R + +++ + + T IF + ++++ L+LL +LL ++ +
Sbjct: 3 HIMRSHMNMRLLDLLSILILHLSTI-IFSSSSFQSILELSSLPLLLLSLLLPLRLPSLFN 61
Query: 310 KMVKD---------LPLSLKLVLLK--------SNMVILLLYFSNHLWFLKHLPQILLAP 352
+ + + L L +L+LL +++ L F H F+ L ++L
Sbjct: 62 RSLSNHLSIGNLCILHLLSRLILLSISHFSLFHRSIICCELSFPLHFLFVILLLFLILF- 120
Query: 353 IILLLLFHPFP------QVSILLSLVLYILKIIIGLLIQVLMSIFAPLCICFIPFIKLNL 406
++ LLF F ++ + LS L IL ++I LL+ + + + + I + +
Sbjct: 121 LLFSLLFRGFSLTAISIRIRLALSFSLLILILLIFLLLLLSQATISDILIIILIILLTTR 180
Query: 407 CMLLYLMVLL*LFTMLALLF-----FHLLSTLPMSYIHLISELT*FLFTNFALFCLTKSI 461
+ ++LL LFT+L LL F LL L I L L + I
Sbjct: 181 TLFQSFILLLLLFTILILLIRLGGIFELLIVLIFILIFFSISSNSLLILLIRLITIIP-I 239
Query: 462 FCLINA*YRI*NPRR*LVWVIFVMVSIG*ILLHAIRSLLFLLPQVFVLQFL*TLVILFVL 521
CLI+ + + + V+ +G I H I L +L F+ FL ++ILF+L
Sbjct: 240 LCLIDFSF---------LKDLIVLRRVGGI--HLILRPLIILTIPFIHIFL--IIILFLL 286
Query: 522 V*LFHVFLPMLFGTLD*DICLIKDCPKCIICILLFLLIIKLLVTYVTLLSKENYLIIP-- 579
+ L +FL + G+L I L+ + +I FLL+I +L+ + L +L+IP
Sbjct: 287 ITLLSIFLRIFLGSL--SIILLGNHLISLI-FRRFLLLIHILLLILLLF----FLLIPHL 339
Query: 580 -ANLLLILNLNFFTLIFGVL*LKHLFMAISIF*P*LMILVD 619
LLLIL LN LIF + L + I + L++L+D
Sbjct: 340 RIQLLLILLLNVSHLIFNIWLFIRLVLTIILL--PLLVLID 378
Score = 47.4 bits (111), Expect = 0.003
Identities = 106/463 (22%), Positives = 206/463 (43%), Gaps = 75/463 (16%)
Query: 100 NSPLMFGLSFRSVFLKLIEFVSLLF-ALPSIISNKVLNLSLTISQR*-NLFGRS-SIHIV 156
N L+ LS + L I F S F ++ + S +L LSL + R +LF RS S H+
Sbjct: 10 NMRLLDLLSILILHLSTIIFSSSSFQSILELSSLPLLLLSLLLPLRLPSLFNRSLSNHL- 68
Query: 157 LCLCALVHIHAVVNLCVLLENFAWRIK*FSFSLA*MILSQL*RLKFFLWIHFLQSTRFIL 216
++ NLC+L + R+ S S + + + +HFL F++
Sbjct: 69 ----------SIGNLCIL--HLLSRLILLSISHFSLFHRSIICCELSFPLHFL----FVI 112
Query: 217 WLFKKKVIIL*LLLFLVKNLVYL*MHQMLECPMAVVNL-----LRDHLNLRTIQDIALFA 271
L + +L LLF +L + + L +++ L L L+ TI DI +
Sbjct: 113 LLLFLILFLLFSLLFRGFSLTAISIRIRLALSFSLLILILLIFLLLLLSQATISDILIII 172
Query: 272 IGII--TQWIFVTRCMVIPMQINLMLL-------QMLLLMKAFLILRKMVKDLPLSLKLV 322
+ I+ T+ +F + +++ + L+LL ++L+++ LI + + L L +
Sbjct: 173 LIILLTTRTLFQSFILLLLLFTILILLIRLGGIFELLIVLIFILIFFSISSNSLLILLIR 232
Query: 323 LLKSNMVILLLYFSNHLWFLKHLP--------QILLAPIILLLLFHPFPQVSILLSLVLY 374
L+ ++ L+ FS FLK L ++L P+I+L + P + I L ++L+
Sbjct: 233 LITIIPILCLIDFS----FLKDLIVLRRVGGIHLILRPLIILTI----PFIHIFLIIILF 284
Query: 375 ILKIIIGLLIQVLMSIFAPLCI----CFIPFIKLNLCMLLYLMVLL*LFTMLALLFFHLL 430
+L ++ + +++ + + + + + F + L + + L++LL F ++ L LL
Sbjct: 285 LLITLLSIFLRIFLGSLSIILLGNHLISLIFRRFLLLIHILLLILLLFFLLIPHLRIQLL 344
Query: 431 STLPMSYIHLISELT*FLFTNFALFCLTKSIFCLINA*YRI*NPRR*LVWVIFVMVSIG* 490
L ++ HLI + +LF L + + LI+ ++
Sbjct: 345 LILLLNVSHLIFNI--WLFIRLVLTIILLPLLVLID-----------------ILQIFSK 385
Query: 491 ILLHAIRSLLFLLPQVFVLQFL*TLVI-LFVLV*LFHVFLPML 532
++LH I LL ++ + +L+F L++ F L L H+F +L
Sbjct: 386 VILH-INRLLVIILSLMLLRFHRLLILKTFNLSSLLHLFSDIL 427
Score = 36.6 bits (83), Expect = 6.1
Identities = 57/244 (23%), Positives = 104/244 (42%), Gaps = 42/244 (17%)
Query: 715 HMLFCIQFFS*IEFQLLFSNINLLIMFYMIHCLIFILSKFLVAFVMLLHFKLIEQNYNLE 774
H+L + S F L +I + + +H L IL FL+ F++ F L+ + ++L
Sbjct: 77 HLLSRLILLSISHFSLFHRSIICCELSFPLHFLFVILLLFLILFLL---FSLLFRGFSLT 133
Query: 775 PESV----------------------FS*VTSLDSKVQFFLTYIPEKSLFQEMLFSMN*Y 812
S+ S T D + + + ++LFQ + + +
Sbjct: 134 AISIRIRLALSFSLLILILLIFLLLLLSQATISDILIIILIILLTTRTLFQSFILLLLLF 193
Query: 813 YLTIHHHPLLPLKIGNIF-LPLPLIFLILRILIFHNHHL-LSHHLHS--PLLHNLHHYLL 868
+ I L +++G IF L + LIF+++ I N L L L + P+L + L
Sbjct: 194 TILI-----LLIRLGGIFELLIVLIFILIFFSISSNSLLILLIRLITIIPILCLIDFSFL 248
Query: 869 MSLYLLELPSEIKLHLH--IYMTTFAMHLFLLLITVSVNIPFPILFHMLVYLTLILFLLC 926
L +L I L L I +T +H+FL++I F ++ + ++L + L L
Sbjct: 249 KDLIVLRRVGGIHLILRPLIILTIPFIHIFLIIIL------FLLITLLSIFLRIFLGSLS 302
Query: 927 LLLL 930
++LL
Sbjct: 303 IILL 306
Score = 36.2 bits (82), Expect = 8.0
Identities = 36/125 (28%), Positives = 55/125 (43%), Gaps = 17/125 (13%)
Query: 822 LPLKIGNIFLPLPLIFLILRILIFH---NHHLLSHHLHSPLLHNLHHYLLMSLYLLELPS 878
LPL + ++ LPL L L R L H + + H L +L ++ H+ L ++
Sbjct: 43 LPLLLLSLLLPLRLPSLFNRSLSNHLSIGNLCILHLLSRLILLSISHFSLFHRSIICCEL 102
Query: 879 EIKLHLHIYMTTFAMHLFLL---------LITVSVNIPFPILFHMLVYLTLILFLLCLLL 929
LH + + LFLL L +S+ I + F +L IL LL LL
Sbjct: 103 SFPLHFLFVILLLFLILFLLFSLLFRGFSLTAISIRIRLALSFSLL-----ILILLIFLL 157
Query: 930 LILNQ 934
L+L+Q
Sbjct: 158 LLLSQ 162
>gb|AAA29909.1| ORF 3
Length = 393
Score = 51.2 bits (121), Expect = 2e-04
Identities = 57/335 (17%), Positives = 157/335 (46%), Gaps = 10/335 (2%)
Query: 202 FFLWIHFLQSTRFILWLFKKKVIIL*LLLFLVKNLVYL*MHQMLECPMAVVNLLRDHLNL 261
F + + F+ +T + +F ++I+ + F V + + ML P+ VV++ + +
Sbjct: 35 FTITVFFISTTIIVFVIFLIVILIILAIFFGVTIFLIIFSMTMLVIPVLVVSVFFVTIFI 94
Query: 262 RTIQDIALFAIGIITQWIFVTRCMVIPMQINLMLLQMLLLMKAFLILRKMVKDLPLSLKL 321
I + +F + + IF+ +++ + + +LL + ++ ++ + + L +
Sbjct: 95 IAILLVTIFVVSVFVVTIFIIAVLLVTIFVISILLVTIFVVSILVVTLFITIFVRAILVV 154
Query: 322 VLLKSNMVILLLYFSNHLWFLKHLPQILLAPIILLLLFHPFPQVSILLSLVLYILKIIIG 381
+L N+ + + F + + I + I+++ LF +IL+ + + +
Sbjct: 155 TILVINLFVTI--FVRAILVITLFVAIFVRTILVITLFVAIFVRTILVITLFVTIFVRTI 212
Query: 382 LLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTMLALLFFHL--LSTLPMS-YI 438
L+I + ++IF + F+ + + +L + +L+ ++A+L + +S L ++ ++
Sbjct: 213 LVITLFVAIFVRTILVITLFVTIFIISILLVTILVISVFIIAILTISIFVISILIITIFV 272
Query: 439 HLISELT*FLFTNFALFCLTKSIFC----LINA*YRI*NPRR*LVWVIFVMVSIG*ILLH 494
+ +T F+ T FA+ L SIF ++ A + P +++I ++V +++
Sbjct: 273 ISVFVITIFVVTIFAITVLVISIFIVAFFIVFAVSILLVPLLMTIFIIAILVITIFVIVF 332
Query: 495 AIRSLLFLLPQVFVLQFL*TLVILFVLV*LFHVFL 529
+ L ++ VF + +++F+ + ++ +F+
Sbjct: 333 TVSVLAGIIACVFSTITIFLTIVIFI-INIYRIFM 366
Score = 40.0 bits (92), Expect = 0.56
Identities = 78/394 (19%), Positives = 169/394 (42%), Gaps = 63/394 (15%)
Query: 293 LMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSNHLWFLKHLPQI---- 348
+M++ ML++M A +++ M ++ M++L++ F+ ++F+ +
Sbjct: 4 MMMMVMLMMMVAVVVMVVM-----------MVMFIMIMLIVVFTITVFFISTTIIVFVIF 52
Query: 349 LLAPIILLLLFHPFPQVSILLSLVLYILKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCM 408
L+ +I+L +F I+ S+ + ++ +++ + V + I A L + + + +
Sbjct: 53 LIVILIILAIFFGVTIFLIIFSMTMLVIPVLVVSVFFVTIFIIAILLVTIF-VVSVFVVT 111
Query: 409 LLYLMVLL*LFTMLALLFFHLLSTLPMSYIHLISELT*FLFTNFALFCLTKSIFCLINA* 468
+ + VLL ++++L L++ +S + + +T F+ + L ++F I
Sbjct: 112 IFIIAVLLVTIFVISIL---LVTIFVVSILVVTLFITIFVRAILVVTILVINLFVTIFV- 167
Query: 469 YRI*NPRR*LVWVIFVMVSIG*ILLHAIRSLLF----LLPQVFVLQFL*TLVILFVLV*L 524
R LV +FV + + IL+ + +F L+ +FV F+ T++++ + V +
Sbjct: 168 ------RAILVITLFVAIFVRTILVITLFVAIFVRTILVITLFVTIFVRTILVITLFVAI 221
Query: 525 FHVFLPMLFGTLD*DICLIKDCPKCIICILLFLLIIKLLVTYVTLLSKENYLI----IPA 580
F + I+ I LF+ I + + VT+L ++I I
Sbjct: 222 F---------------------VRTILVITLFVTIFIISILLVTILVISVFIIAILTISI 260
Query: 581 NLLLILNLNFFTL------IFGVL*LKHLFMAISIF*P*LMILVDSYGSFYLKPKLKFLH 634
++ IL + F + IF V + ISIF I+ S L P L +
Sbjct: 261 FVISILIITIFVISVFVITIFVVTIFAITVLVISIFIVAFFIVFAV--SILLVPLLMTIF 318
Query: 635 MLKISFT*SIIIIMLLQNS*GLIMVLNSFYQIFM 668
++ I +I+ + G+I + S IF+
Sbjct: 319 IIAILVITIFVIVFTVSVLAGIIACVFSTITIFL 352
Score = 36.2 bits (82), Expect = 8.0
Identities = 56/306 (18%), Positives = 133/306 (43%), Gaps = 28/306 (9%)
Query: 75 VVIISYILGF*TLFLCKLHKQLFFTNSPLMFGLSFRSVFLKLIEFVSLLFALPSIISNKV 134
V+++S F T+F+ + F S + + +V L I +S+L ++S V
Sbjct: 82 VLVVSVF--FVTIFIIAILLVTIFVVSVFVVTIFIIAVLLVTIFVISILLVTIFVVSILV 139
Query: 135 LNLSLTISQR*NLFGRSSIHIVLCLCALVHIHAVVNLCVLLENFAWRIK*FSFSLA*MIL 194
+ L +TI R L +V+ L + + A++ + + + F I + +A +
Sbjct: 140 VTLFITIFVRAILVVTI---LVINLFVTIFVRAILVITLFVAIFVRTILVITLFVAIFVR 196
Query: 195 SQL*RLKFFLWIHFLQSTRFILWLFKKKVIIL*LLLFLVKNLVYL*MHQMLECPMAVVNL 254
+ L T F+ + ++I + V+ ++ + L + ++++
Sbjct: 197 T------------ILVITLFVTIFVRTILVITLFVAIFVRTILVI----TLFVTIFIISI 240
Query: 255 LRDHLNLRTIQDIALFAIGIITQWIFVTRCMVIPMQINLMLLQMLLLMKAFLILRKMVKD 314
L L TI I++F I I+T IFV ++I + + + + + ++ F I ++
Sbjct: 241 L-----LVTILVISVFIIAILTISIFVISILIITIFVISVFVITIFVVTIFAITVLVISI 295
Query: 315 LPLSLKLVLLKSNMVI--LLLYFSNHLWFLKHLPQILLAPIILLLLFHPFPQVSILLSLV 372
++ +V S +++ L+ F + + + ++ ++ F ++I L++V
Sbjct: 296 FIVAFFIVFAVSILLVPLLMTIFIIAILVITIFVIVFTVSVLAGIIACVFSTITIFLTIV 355
Query: 373 LYILKI 378
++I+ I
Sbjct: 356 IFIINI 361
>ref|NP_572233.1| CG15780-PA [Drosophila melanogaster] gi|7290595|gb|AAF46045.1|
CG15780-PA [Drosophila melanogaster]
Length = 640
Score = 50.1 bits (118), Expect = 5e-04
Identities = 48/186 (25%), Positives = 94/186 (49%), Gaps = 22/186 (11%)
Query: 229 LLFLVKNLVYL*MHQM--------LECPMAVVNLLRDHLNLRTIQDIALFAIGIITQWIF 280
LL LV L+ + +H L+ + V+ LL + + L + + L + ++ Q +F
Sbjct: 67 LLLLVLQLMEMVLHLQVLMLVKIWLQLQVLVLVLLLEEMMLE-LHVLFLLLMEMVLQMVF 125
Query: 281 VTR-----CMVIPMQINLMLLQMLL-LMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLY 334
+ M + +Q+ ++L++M+L L + FL+L +MV L + L ++L+ + LLL
Sbjct: 126 QLQELFLLLMEMVLQLQVLLMEMVLQLQELFLLLMEMVLQLQVLLMEMVLQLQELFLLLM 185
Query: 335 ---FSNHLWFLKHLPQILLAPIILLLLFHPFPQVS----ILLSLVLYILKIIIGLLIQVL 387
+ FL + +L ++ LLL Q+ ILL +VL +L +++ L++ V
Sbjct: 186 EMVLQLQVLFLLLMEMVLQLQVLFLLLMEMVLQLQVLFLILLEMVLQLLLLVLLLMVVVA 245
Query: 388 MSIFAP 393
+ + AP
Sbjct: 246 VKVLAP 251
Score = 40.4 bits (93), Expect = 0.43
Identities = 55/257 (21%), Positives = 119/257 (45%), Gaps = 37/257 (14%)
Query: 281 VTRCMVIPMQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSNHLW 340
V + +VI MQ+ +++L ++L +L+ +++++ L L L++L+ ++L
Sbjct: 29 VLQLVVIGMQLQVLVLVLVLEEIGLQVLKLLLEEMVLQLLLLVLQLMEMVL--------- 79
Query: 341 FLKHLPQILLAPIILLLLFHPFPQVSILLSLV---LYILKIIIGLLIQVLMSIFAPLCIC 397
HL ++L I L L QV +L+ L+ + L ++ LL+++++ + L
Sbjct: 80 ---HLQVLMLVKIWLQL------QVLVLVLLLEEMMLELHVLFLLLMEMVLQMVFQLQEL 130
Query: 398 FIPFIKLNLCMLLYLMVLL*LFTMLALLFFHLLSTLPMSYIHLISELT*FLFTNFALFCL 457
F+ +++ L + + LM ++ L LL ++ L + + ++ +L +
Sbjct: 131 FLLLMEMVLQLQVLLMEMVLQLQELFLLLMEMVLQLQVLLMEMVLQLQELFLLLMEMVLQ 190
Query: 458 TKSIFCLINA*YRI*NPRR*LVWVIFVMVSIG*ILLHAIRSL--LFLLPQVFVLQFL*TL 515
+ +F L L+ ++ + + +L+ + L LFL+ VLQ L L
Sbjct: 191 LQVLFLL-------------LMEMVLQLQVLFLLLMEMVLQLQVLFLILLEMVLQLL-LL 236
Query: 516 VILFVLV*LFHVFLPML 532
V+L ++V V P L
Sbjct: 237 VLLLMVVVAVKVLAPQL 253
Score = 38.5 bits (88), Expect = 1.6
Identities = 41/228 (17%), Positives = 105/228 (45%), Gaps = 13/228 (5%)
Query: 217 WLFKKKVIIL*LLLFLVKNLVYL*MHQMLECPMAVVNLLRDHLNLRTIQDIALFAIGIIT 276
W K +++L ++ LV + ++ + V+ L+ + + L+ ++ L ++
Sbjct: 9 WTRAKMMLLLVEMVLQFHALVLQLVVIGMQLQVLVLVLVLEEIGLQVLK--LLLEEMVLQ 66
Query: 277 QWIFVTRCMVIPMQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFS 336
+ V + M + + + +++L + L L+L +++++ L L ++ L ++L + F
Sbjct: 67 LLLLVLQLMEMVLHLQVLMLVKIWLQLQVLVLVLLLEEMMLELHVLFLLLMEMVLQMVFQ 126
Query: 337 NHLWFLKHLPQILLAPIIL-----------LLLFHPFPQVSILLSLVLYILKIIIGLLIQ 385
FL + +L ++L LLL Q+ +LL ++ L+ + LL++
Sbjct: 127 LQELFLLLMEMVLQLQVLLMEMVLQLQELFLLLMEMVLQLQVLLMEMVLQLQELFLLLME 186
Query: 386 VLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTMLALLFFHLLSTL 433
+++ + + ++L + LL + ++L L + +L +L L
Sbjct: 187 MVLQLQVLFLLLMEMVLQLQVLFLLLMEMVLQLQVLFLILLEMVLQLL 234
>gb|EAK89294.1| hypothetical protein with signal peptide [Cryptosporidium parvum]
gi|66358938|ref|XP_626647.1| hypothetical protein
cgd3_620 [Cryptosporidium parvum]
Length = 242
Score = 46.6 bits (109), Expect = 0.006
Identities = 68/266 (25%), Positives = 118/266 (43%), Gaps = 34/266 (12%)
Query: 361 PFPQVSILLSLVLYILKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFT 420
P + I +V++ +K+ + L + L+SIF+ C+ F + + + + F
Sbjct: 9 PLIKFPIFAGMVVFAVKLPVEEL-ESLISIFSS-CLSLFSFFSPSFSFSPFSFLFILFFG 66
Query: 421 MLALLFFHLLSTLPMSYIHLISELT*FLFTNFALFCLTKSIFCLINA*YRI*NPRR*LVW 480
+L LFF+L ++HL L FL F L + +F L L++
Sbjct: 67 LL--LFFYL-------FVHLFFILF-FLRFLFVLLFILCHLFILH------------LLF 104
Query: 481 VIFVMVSIG*ILLHAIRSLLFLLPQVFVLQFL*TLVILFVLV*LFHVFLPMLFGTLD*DI 540
V+F++ + LF+L +F ++FL L LFVL L H+F+ L L I
Sbjct: 105 VLFILC--------LLFIFLFILCLLFFIRFLFFLRFLFVLFILCHLFILHLLFVLF-II 155
Query: 541 CLIKDCPKCIICILLFLLIIKLLVTYVTLLSKENYLIIPANLLLILNLNFFTLIFGVL*L 600
CL+ + +L L I L+ + +L ++L + +LL L+ F L+F +L +
Sbjct: 156 CLLFFIRFLFVLFILCHLFILHLLFVLFILCLLSFLYLLFSLLFFLHFLFVLLLFVLLFI 215
Query: 601 KHLFMAISIF*P*LMILVDSYGSFYL 626
L I + L+ L+ Y YL
Sbjct: 216 LCLLFIICLLFA-LLFLLPLYWVVYL 240
Score = 46.6 bits (109), Expect = 0.006
Identities = 62/217 (28%), Positives = 91/217 (41%), Gaps = 43/217 (19%)
Query: 355 LLLLFHPFPQVSILLSLVLYILKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMV 414
LLL F+ F + L +L+ L+ + VL+ I L I + F+ LC+L +
Sbjct: 67 LLLFFYLF----VHLFFILFFLRFLF-----VLLFILCHLFILHLLFVLFILCLLFIFLF 117
Query: 415 LL*LFTMLALLFFHLLSTLPMSYIHLISELT*FLFTNFALFCLTKSIFCLINA*YRI*NP 474
+L L + LFF + HL L F LF I CL
Sbjct: 118 ILCLLFFIRFLFFLRFLFVLFILCHLF-----ILHLLFVLF-----IICL---------- 157
Query: 475 RR*LVWVIFVMVSIG*ILLHAIRSLLFLLPQVFVLQFL*TLVILFVLV*LFHVFLPMLFG 534
L ++ F+ V IL H +L LL +F+L L L +LF L+ H +L
Sbjct: 158 ---LFFIRFLFVLF--ILCHLF--ILHLLFVLFILCLLSFLYLLFSLLFFLHFLFVLLLF 210
Query: 535 TLD*DICLIKDCPKCIICILLFLLIIKLL--VTYVTL 569
L +CL+ IIC+L LL + L V Y+T+
Sbjct: 211 VLLFILCLL-----FIICLLFALLFLLPLYWVVYLTM 242
Score = 43.1 bits (100), Expect = 0.066
Identities = 42/154 (27%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 295 LLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSNHLWFLKHLPQ--ILLAP 352
L +L ++ IL + L L + L ++ LL+F L+FL+ L IL
Sbjct: 87 LFVLLFILCHLFILHLLFVLFILCLLFIFL---FILCLLFFIRFLFFLRFLFVLFILCHL 143
Query: 353 IILLLLFHPFPQVSILLSLVLYILKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYL 412
IL LLF F + L++L I+ L I L+ + LC+ ++ +L L+
Sbjct: 144 FILHLLFVLFIICLLFFIRFLFVLFILCHLFILHLLFVLFILCLLSFLYLLFSLLFFLHF 203
Query: 413 MVLL*LFTMLAL--------LFFHLLSTLPMSYI 438
+ +L LF +L + L F LL LP+ ++
Sbjct: 204 LFVLLLFVLLFILCLLFIICLLFALLFLLPLYWV 237
>pir||E22845 hypothetical protein 4 - Trypanosoma brucei mitochondrion
Length = 445
Score = 45.8 bits (107), Expect = 0.010
Identities = 86/310 (27%), Positives = 135/310 (42%), Gaps = 26/310 (8%)
Query: 274 IITQWIFVTRCMVIPMQINLM-LLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILL 332
II +IF+ ++I + + LL LLLM + + +V L L L+ ++ +L
Sbjct: 91 IIFLFIFINHIIIISILFEIFSLLLFLLLMSSRFGYKILV--LWYYYMLNLINFILLFIL 148
Query: 333 LYFS--NHLWFL---------KHLPQILLAPIILLLLFHPFPQVSILLSLVLYILKIIIG 381
LYF N+ +FL + IL LL+LF + IL LYI +G
Sbjct: 149 LYFMILNYCFFLCDFCFLVFDEEWLGILCLFYTLLILFKLYIAFLILFMEQLYIR---LG 205
Query: 382 LLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVL-L*LFTMLALLFFHLLSTLPMSYIHL 440
+ I + M F L CFI I L + Y++ + L LF + L S +S + +
Sbjct: 206 VFIFIYMLTFYIL-FCFILIILLISFIYFYILFIKLLLFQSCTCVLIGLNSFAIVSLLFV 264
Query: 441 ISELT*FLFTNFALFCLTKS-IFCLINA*YRI*NPRR*LVWVIFVMVSIG*ILLHAIRSL 499
+S + F F F +F TK+ IF L + I + L+ +I+ I I
Sbjct: 265 LS-VNNFCFL-FLIFISTKNYIFYLYLNFHLIYSISLVLLIIIYYFFIIYNIFDFKYNEN 322
Query: 500 LFLLPQVFVLQFL*TLVILFVLV*LFHVF--LPMLFGTLD*DICLIKDCPKCIICILLFL 557
FL+ +F F +I +L LF +P++FG CL+ ICI F
Sbjct: 323 YFLINFIF-FSFFNNFLISLLLACLFLCIGAIPIVFGFFIKVFCLLLQLSYLCICIG-FF 380
Query: 558 LIIKLLVTYV 567
II L++ Y+
Sbjct: 381 FIIWLIIIYI 390
Score = 45.8 bits (107), Expect = 0.010
Identities = 92/388 (23%), Positives = 163/388 (41%), Gaps = 92/388 (23%)
Query: 398 FIPFIKLNLCMLLYLMVLL*LFTMLALLFFHLLSTL-PMSYIHLISELT*FLFTNFALFC 456
F+ I + + +++Y ++L +T L LL F LL L + +I L+ F+F LFC
Sbjct: 7 FLYIIHIFIFLIIYSFIILCDYTTLTLLSFDLLWLLINLFWITLLDSYICFIFILLFLFC 66
Query: 457 LTKSIFCLINA*YRI*NPRR*LVWVIFVMVSIG*ILLHAIRSLLFLLPQVFVLQFL*TLV 516
T FC ++ R +F+++ I I+ +F+ F+ ++
Sbjct: 67 FT-LFFCFLSFDTRF----------LFIIIIIQYII-------------IFLFIFINHII 102
Query: 517 ILFVLV*LFHVFLPMLFGTLD*DICLIKDCPKCIICILLFLLIIK-------LLVTYVTL 569
I+ + LF +F +LLFLL++ L++ Y +
Sbjct: 103 IISI---LFEIF-----------------------SLLLFLLLMSSRFGYKILVLWYYYM 136
Query: 570 LSKENYLIIPANL-LLILNLNFFTLIFGVL*LKHLFMAISIF*P*LMILVDSYGSFYLKP 628
L+ N++++ L +ILN FF F L ++ I L+IL Y +F
Sbjct: 137 LNLINFILLFILLYFMILNYCFFLCDFCFLVFDEEWLGILCLFYTLLILFKLYIAFL--- 193
Query: 629 KLKFLHMLKISFT*SIIIIML---LQNS*GLIMVLNSFYQIFMLQKASFIKELV*KHLNK 685
+ F+ L I I I ML + LI++L SF ++L FIK L+ +
Sbjct: 194 -ILFMEQLYIRLGVFIFIYMLTFYILFCFILIILLISFIYFYIL----FIKLLLFQSCTC 248
Query: 686 MLE*RENINTFSMLLELCCFNPNFPMFSGHMLFCIQFFS*IEFQLLFSNINLLIMFYMIH 745
+L +N+F+++ L + N FC F + S N + Y+
Sbjct: 249 VL---IGLNSFAIVSLLFVLSVN--------NFCFLFL------IFISTKNYIFYLYLNF 291
Query: 746 CLIFILSKFLVAFVMLLHFKLIEQNYNL 773
LI+ +S LV +++ +F +I YN+
Sbjct: 292 HLIYSIS--LVLLIIIYYFFII---YNI 314
Score = 45.4 bits (106), Expect = 0.013
Identities = 83/364 (22%), Positives = 145/364 (39%), Gaps = 54/364 (14%)
Query: 278 WIFVTRCMVIPMQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSN 337
W+ + + + + + +LL + F + + L ++++ ++I L F N
Sbjct: 40 WLLINLFWITLLDSYICFIFILLFLFCFTLFFCFLSFDTRFLFIIIIIQYIIIFLFIFIN 99
Query: 338 HLWFLKHLPQILLAPIILLLLFHPFPQVSI------LLSLVLYILKIIIGLLIQVLMSIF 391
H+ + L +I + LLL+ F + +L+L+ +IL I+ L +L F
Sbjct: 100 HIIIISILFEIFSLLLFLLLMSSRFGYKILVLWYYYMLNLINFILLFIL-LYFMILNYCF 158
Query: 392 APLCICFIPFIKL---NLCMLLYLMVLL*LFTMLALLFFHLLSTLPMSYIHLISELT*FL 448
CF+ F + LC+ L++L L+ +LF L YI L + ++
Sbjct: 159 FLCDFCFLVFDEEWLGILCLFYTLLILFKLYIAFLILFMEQL------YIRLGVFIFIYM 212
Query: 449 FTNFALFCLTKSIFCLINA*YRI*NPRR*LVWVIFVMVSIG*ILLHAIRSLLFLLPQ--- 505
T + LFC I LI+ Y + L++ V IG + AI SLLF+L
Sbjct: 213 LTFYILFCFI-LIILLISFIYFYILFIKLLLFQSCTCVLIG-LNSFAIVSLLFVLSVNNF 270
Query: 506 -VFVLQFL*TLVILFVLV*LFHVFLPMLFGTLD*DICLIKDCPKCIICILLFLLIIKL-- 562
L F+ T +F L FH+ I L+ +I I F +I +
Sbjct: 271 CFLFLIFISTKNYIFYLYLNFHLIY---------SISLV-----LLIIIYYFFIIYNIFD 316
Query: 563 --------LVTYVTLLSKENYLIIPANLLLILNLNFFTLIFG--------VL*LKHLFMA 606
L+ ++ N+LI L L + ++FG +L L +L +
Sbjct: 317 FKYNENYFLINFIFFSFFNNFLISLLLACLFLCIGAIPIVFGFFIKVFCLLLQLSYLCIC 376
Query: 607 ISIF 610
I F
Sbjct: 377 IGFF 380
>gb|EAL01937.1| hypothetical protein CaO19.11807 [Candida albicans SC5314]
Length = 191
Score = 45.4 bits (106), Expect = 0.013
Identities = 43/181 (23%), Positives = 79/181 (42%), Gaps = 7/181 (3%)
Query: 275 ITQWIFVTRCMVIPMQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLY 334
IT +IF T I + M+ + L M FL L ++ L + L++L +++L+
Sbjct: 12 ITIFIFET----IMFFLFTMVFRFLFFMILFLFLFMILFFLMILFFLMIL---FFLMILF 64
Query: 335 FSNHLWFLKHLPQILLAPIILLLLFHPFPQVSILLSLVLYILKIIIGLLIQVLMSIFAPL 394
F L+FL L ++ + + L F + LS+V ++ + L + L
Sbjct: 65 FLMILFFLMVLFLSMVLSLSVFFLLFMFFFLFFFLSMVFFLFLFMFLLFFMFFLFFMFLL 124
Query: 395 CICFIPFIKLNLCMLLYLMVLL*LFTMLALLFFHLLSTLPMSYIHLISELT*FLFTNFAL 454
F+ F + + +++ L F L L F + L + + L+S + FLF N+
Sbjct: 125 FFMFLLFFMFMIFLFTFMIFLFLSFMFLLLFMFMIFLLLLIMILLLLSLMVLFLFINYLW 184
Query: 455 F 455
F
Sbjct: 185 F 185
Score = 45.1 bits (105), Expect = 0.017
Identities = 47/211 (22%), Positives = 96/211 (45%), Gaps = 22/211 (10%)
Query: 302 MKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSNHLWFLKHLPQILLAPIILLLLFHP 361
M FL++ K + + ++ MV L+F FL + L+ L++LF
Sbjct: 1 MFTFLMVFKKFITIFIFETIMFFLFTMVFRFLFFMILFLFLFMILFFLMILFFLMILF-- 58
Query: 362 FPQVSILLSLVLYILKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTM 421
F + L ++ +++ + + +++ +S+F L + F F L++ L+L + L LF M
Sbjct: 59 FLMILFFLMILFFLMVLFLSMVLS--LSVFFLLFMFFFLFFFLSMVFFLFLFMFL-LFFM 115
Query: 422 LALLFFHLLSTLPMSYIHLISELT*FLFTNFALFCLTKSIFCLINA*YRI*NPRR*LVWV 481
L F LL + + + + FLFT F +F +F L+ +++
Sbjct: 116 FFLFFMFLLFFMFLLFFMFMI----FLFT-FMIFLFLSFMFLLL------------FMFM 158
Query: 482 IFVMVSIG*ILLHAIRSLLFLLPQVFVLQFL 512
IF+++ I +LL ++ L + ++ F+
Sbjct: 159 IFLLLLIMILLLLSLMVLFLFINYLWFFMFI 189
Score = 40.0 bits (92), Expect = 0.56
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 19/192 (9%)
Query: 339 LWFLKHLPQILLAPIILLLLFHPFPQVSILLSLVLYILKIIIGLLIQVLMSIFAPLCICF 398
L K I + I+ LF + + L L++ I+ L+I + I L I F
Sbjct: 5 LMVFKKFITIFIFETIMFFLFTMVFRFLFFMILFLFLFMILFFLMILFFLMILFFLMILF 64
Query: 399 IPFIKLNLCMLLYLMVLL*LFTMLALLFFHLLSTLPM-SYIHLISELT*FLFTNFALFCL 457
I L +L MVL L +FF L L M ++ L L F+F F +F L
Sbjct: 65 FLMILFFLMVLFLSMVLSLSVFFLLFMFFFLFFFLSMVFFLFLFMFLLFFMFFLFFMFLL 124
Query: 458 TKSIFCLINA*YRI*NPRR*LVWVIFVMVSIG*ILLHAIRSLLFLLPQVFVLQFL*TLVI 517
+F L +++IF+ ++ S +FLL +F++ FL L++
Sbjct: 125 F-FMFLLF------------FMFMIFLFT----FMIFLFLSFMFLLLFMFMI-FLLLLIM 166
Query: 518 LFVLV*LFHVFL 529
+ +L+ L +FL
Sbjct: 167 ILLLLSLMVLFL 178
Score = 38.5 bits (88), Expect = 1.6
Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 62/245 (25%)
Query: 356 LLLFHPFPQVSILLSLVLYILKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVL 415
L++F F + I +++ ++ ++ L +++ +F + + F L +L +LM+L
Sbjct: 5 LMVFKKFITIFIFETIMFFLFTMVFRFLFFMILFLFLFMILFF-------LMILFFLMIL 57
Query: 416 L*LFTMLALLFFHLLSTLPMSYIHLISELT*F--LFTNFALFCLTKSIFCLINA*YRI*N 473
F ++ L F +L L + ++ ++ L+ F LF F LF +F L
Sbjct: 58 ---FFLMILFFLMILFFLMVLFLSMVLSLSVFFLLFMFFFLFFFLSMVFFLF-------- 106
Query: 474 PRR*LVWVIFVMVSIG*ILLHAIRSLLFLLPQVFVLQFL*TLVILFVLV*LFHVFLP--M 531
+FLL +F L F+ L +F+L +F +FL M
Sbjct: 107 ------------------------LFMFLLFFMFFLFFMFLLFFMFLLFFMFMIFLFTFM 142
Query: 532 LFGTLD*DICLIKDCPKCIICILLFLLIIKLLVTYVTLLSKENYLIIPANLLLILNLNFF 591
+F + +FLL+ ++ + L+ L + L I L FF
Sbjct: 143 IF----------------LFLSFMFLLLFMFMIFLLLLIMILLLLSLMVLFLFINYLWFF 186
Query: 592 TLIFG 596
I G
Sbjct: 187 MFIVG 191
>gb|AAK77584.1| heme maturase [Tetrahymena thermophila]
gi|15027653|ref|NP_149387.1| heme maturase [Tetrahymena
thermophila]
Length = 518
Score = 45.1 bits (105), Expect = 0.017
Identities = 95/418 (22%), Positives = 184/418 (43%), Gaps = 66/418 (15%)
Query: 548 KCIICILLFLLIIKLLV--------TYVTLLSKE---NYLIIPANLLLILNLNFFTLIFG 596
K I ++ LL+IK V Y+ LL+ NY II L I+N+NF L F
Sbjct: 23 KIIFVFIISLLLIKSYVFYYYYFESIYIALLNNLINLNYNIILIFLFYIINVNFKFLNFF 82
Query: 597 VL*LKHLFMAISIF*P*LMILVDSYG-SFYLKPKLKFLHMLKISFT*S----IIIIMLLQ 651
+L F+ ++SY + L L +H + I + S I+ LL
Sbjct: 83 IL----FFILNCELINNYTNNIESYNLNINLLNGLFLIHPILIYYFYSRFLNILNFTLLY 138
Query: 652 NS*GLIMVLNSFYQIFMLQKASFIKELV*KHLNKMLE*RENINTFSMLLELCCF----NP 707
N+ I++ Y IF L ++IK L+ + NI+ + + L C+
Sbjct: 139 NN---ILISKKKYNIFNLININYIKNLI----------KVNIHIILVAISLGCWWAFQEL 185
Query: 708 NF-PMFSGHMLFCIQFFS*IEFQLLFSNINLLIMFYMIHCLIFILSKFLVAFVMLLHFKL 766
N+ ++ ++ I F + F L N + I I+ L +L K+L+ ++L+ + L
Sbjct: 186 NWGTWWNWDLVELINLFILLSFIFLIHNNYIYIKLNSINQLYSLLIKYLIC-ILLVRYNL 244
Query: 767 IEQNYNLEPESVFS*VTSLDSKVQFFLTYIPEKSLFQEMLFSMN*YYL--TIHHHPLLPL 824
I+ +N F + +L+ +Q+ ++ + F + Y+ I+
Sbjct: 245 IQSIHN------FLSIDNLNQYIQY---------VYYCLCFFLYFYFFLKIINTKKFYKF 289
Query: 825 KIGN-IFLPLPLIFLILRILIFHNHHLLSHHLHSPLLHNLHHYLLMSL-----YLLELPS 878
K N I L ++F I+ I +F+N + + L + ++ ++L+ L +L PS
Sbjct: 290 KYYNFIKLTSNIVFYIIIINLFYNFKV--NTLQIFIYSYINTFILLVLCSIFYIILYQPS 347
Query: 879 EIKLHLHIYMTTFAMHLFLLLITVSVNIPF-PILFHMLVYLTLILFLLCLLLLILNQN 935
IKL+++ + F+ + +I++ + I + ++L +++F+L + L +L+ N
Sbjct: 348 IIKLYMN-FKLIFSWISNVFIISLKTFFFYRSIKKYKFIHLFIVIFILFISLNLLSFN 404
>ref|NP_035065.1| neuropeptide Y receptor Y6 [Mus musculus]
gi|2494995|sp|Q61212|NPY6R_MOUSE Neuropeptide Y receptor
type 6 (NPY6-R) (Pancreatic polypeptide receptor 2)
(PP2) gi|1679634|gb|AAB19188.1| pancreatic polypeptide
receptor PP2 gi|1378004|gb|AAB18624.1| neuropeptide Y
receptor Y6 [Mus musculus] gi|26326263|dbj|BAC26875.1|
unnamed protein product [Mus musculus]
Length = 371
Score = 44.7 bits (104), Expect = 0.023
Identities = 67/263 (25%), Positives = 119/263 (44%), Gaps = 49/263 (18%)
Query: 731 LFSNINLLIMFY--------MIHCLIFILS-KFLVAFVMLLHFKLIEQNYNLEPESVF-S 780
+F N++L+I+ + + + LI LS ++ VM + F +I Y L VF +
Sbjct: 50 IFGNLSLIIIIFKKQREAQNVTNILIANLSLSDILVCVMCIPFTVI---YTLMDHWVFGN 106
Query: 781 *VTSLDSKVQFFLTYIPEKSLFQEMLFSMN*YYLTIHHHPLLPLKIGNIFLPLPLIFLI- 839
+ L S VQ + S+F +L ++ Y L ++ P ++ + + + LI+LI
Sbjct: 107 TMCKLTSYVQSVSVSV---SIFSLVLIAIERYQLIVNPRGWKP-RVAHAYWGIILIWLIS 162
Query: 840 --LRILIFHNHHLLSHHLHSPLLHNLHHYLLMSLYLLELPSEIKLHLHIYMTTFAMHLFL 897
L I +F LS+HL + HNL LP++I H + + L
Sbjct: 163 LTLSIPLF-----LSYHLTNEPFHNL-----------SLPTDIYTHQVACVEIWPSKLNQ 206
Query: 898 LLITVSVNIPFPILFHMLVYLTLILFLLCLLLLILNQNPMMRQ-----SNMTAGNKQCRL 952
LL + S LF + ++ L L+C L ++L RQ N + N+ R+
Sbjct: 207 LLFSTS-------LFMLQYFVPLGFILICYLKIVLCLRKRTRQVDRRKENKSRLNENKRV 259
Query: 953 NLMLLN-RLALGR*WISLHLSNL 974
N+ML++ + G W+ L++ N+
Sbjct: 260 NVMLISIVVTFGACWLPLNIFNV 282
>ref|NP_852645.1| RNA polymerase beta'' chain [Eimeria tenella]
gi|31322480|gb|AAO40246.1| RNA polymerase C2 [Eimeria
tenella]
Length = 1050
Score = 44.3 bits (103), Expect = 0.029
Identities = 64/285 (22%), Positives = 125/285 (43%), Gaps = 27/285 (9%)
Query: 630 LKFLHMLKISFT*SIIIIMLLQNS*GLIMVLNSFYQIFMLQKASFIKELV*KHLNKMLE* 689
+K+ + ++ I+ + L+N+ + SFY +F+L+K F + L N+++
Sbjct: 365 VKYHKIKRLKNNNKILYFIYLKNN---YFIFKSFYILFILKKYKFNQIL--SINNRLIYS 419
Query: 690 RENINTFSMLLELCCFNPNFPMFSGHMLFCIQFFS*IEFQLLFSNINLLIMFYMIHCLIF 749
+ NI ++LL N ++ L I + L+ NI LI+ + I
Sbjct: 420 KNNIYLSNLLLIYLNIN---NIYQRKSLININHEQNYTGEFLYKNILQLIIKNKYYKWII 476
Query: 750 ILSKFLVAFVMLLHFKLIEQNYNLEPESVFS*VTSLDSKVQFFLTYIPEKSLFQEMLFSM 809
I + F K NYN+ E + + SK Q ++ K+ + L+S
Sbjct: 477 INLNTTILF-----NKYFPINYNIIKEKII----FIKSKNQRYIKLYLIKN--KNFLYSY 525
Query: 810 N*YYLTIHHHPLLPLKIGNIFLPLPLIFLILRILIFHNHHLLSHHLHSPLLHNLHHYLLM 869
Y ++H L + I NIF + + LI + LI N ++L++++ + N+++
Sbjct: 526 RKYINKLYH--LKKIFILNIFFSINYLLLIEKYLILKNTYILNYNI--KYIFNIYN---- 577
Query: 870 SLYLLELPSEIKLHLHIYMTTFAMHLFLLLITVSVNIPFPILFHM 914
++ L++ +I + +++ F L I NI FPI H+
Sbjct: 578 TINLIKCKKKIIIWFKMFLKVFYTKLKKKNILKKNNIIFPIKLHI 622
>ref|XP_524016.1| PREDICTED: hypothetical protein XP_524016 [Pan troglodytes]
Length = 273
Score = 43.9 bits (102), Expect = 0.038
Identities = 44/124 (35%), Positives = 65/124 (51%), Gaps = 9/124 (7%)
Query: 815 TIHHHPLLPLKIGNIFLPLPLIFLILRILIFHNHHLLSHHLHSPLLHNLHHYLLMSLYLL 874
T+ HPL L I + LP L LI R+L+ H HLL + LLH L +L+ L L
Sbjct: 73 TVLPHPL-HLLITTV-LPHLLYLLITRVLL-HLLHLLITTVLPHLLHLLITKVLLHLLHL 129
Query: 875 ELPSEIKLHLHIYMTTFAMHLFLLLITVSV-----NIPFPILFHMLVYLTLILFLLCLLL 929
+ + + LH+ +TT +HL LLIT + + +L H+L +L + LL LL
Sbjct: 130 LITTVLPHLLHLLITTVLLHLLHLLITTDLLHLLHLLITKVLLHLL-HLLITTGLLHLLH 188
Query: 930 LILN 933
L++N
Sbjct: 189 LLIN 192
Score = 40.8 bits (94), Expect = 0.33
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 821 LLPLKIGNIFLPLPLIFLILRILIFHNHHLLSHHLHSPLLHNLHHYLLMSLYLLELPSEI 880
LL L I + LP PL LI +L H HLL + LLH L +L L L + + +
Sbjct: 18 LLHLLITTV-LPHPLHLLITTVLP-HLLHLLITTVLPHLLHLLITTVLPHLLHLLITTVL 75
Query: 881 KLHLHIYMTTFAMHLFLLLIT--------VSVNIPFPILFHMLVYLTLILFLLCLLLLIL 932
LH+ +TT HL LLIT + + P L H+L+ L+ L L+ +L
Sbjct: 76 PHPLHLLITTVLPHLLYLLITRVLLHLLHLLITTVLPHLLHLLITKVLLHLLHLLITTVL 135
Score = 39.7 bits (91), Expect = 0.73
Identities = 42/109 (38%), Positives = 56/109 (50%), Gaps = 19/109 (17%)
Query: 821 LLPLKIGNIFLPLPLIFLILRILIFHNHHLLSHHLHSPLLHNLHHYLLMSLYLLELPSEI 880
LL L I + LP PL LI +L HLL + LLH LH LL++ L L
Sbjct: 66 LLHLLITTV-LPHPLHLLITTVL----PHLLYLLITRVLLHLLH--LLITTVLPHL---- 114
Query: 881 KLHLHIYMTTFAMHLFLLLITVSVNIPFPILFHMLVYLTLILFLLCLLL 929
LH+ +T +HL LLIT + P L H+L+ T++L LL LL+
Sbjct: 115 ---LHLLITKVLLHLLHLLITTVL----PHLLHLLI-TTVLLHLLHLLI 155
Score = 36.2 bits (82), Expect = 8.0
Identities = 32/102 (31%), Positives = 50/102 (48%), Gaps = 4/102 (3%)
Query: 835 LIFLILRILIFHNHHLLSHHLHSPLLHNLHHYLLMSLYLLELPSEIKLHLHIYMTTFAMH 894
L+ L++ ++ H HLL + LH L +L L L + + + LH+ +TT H
Sbjct: 6 LLHLLITTVLPHLLHLLITTVLPHPLHLLITTVLPHLLHLLITTVLPHLLHLLITTVLPH 65
Query: 895 LFLLLITVSVNIPFPILFHM----LVYLTLILFLLCLLLLIL 932
L LLIT + P +L L+YL + LL LL L++
Sbjct: 66 LLHLLITTVLPHPLHLLITTVLPHLLYLLITRVLLHLLHLLI 107
>ref|NP_764829.1| ComEC late competence protein 3 [Staphylococcus epidermidis ATCC
12228] gi|27315738|gb|AAO04873.1| ComEC late competence
protein 3 [Staphylococcus epidermidis ATCC 12228]
Length = 738
Score = 43.5 bits (101), Expect = 0.050
Identities = 39/153 (25%), Positives = 72/153 (46%), Gaps = 16/153 (10%)
Query: 317 LSLKLVLLKSNMVILLLYFSNHLWFLKHLPQILLAPIILLLLFHPFPQVSILLSLVLYIL 376
L++ LVL+K ++LLL ++ + F+ + + II+L+L F + SI + +++L
Sbjct: 228 LNIPLVLIKGVTILLLLIYAVYTGFVPSAMRAISIAIIILMLPIHFRKSSIHVLSFIFVL 287
Query: 377 KII--------IGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTMLALLFFH 428
I+ IG L+S+F L +I +K C+ + + LA L
Sbjct: 288 MILLNPQFINHIGFQFSFLISLFIILAKPYISALKPLKCLF--------IISFLAQLGSI 339
Query: 429 LLSTLPMSYIHLISELT*FLFTNFALFCLTKSI 461
+++T + I L+ F+F F F L S+
Sbjct: 340 VINTYHFNQFQWIGLLSNFIFVPFYSFILFPSV 372
Score = 38.5 bits (88), Expect = 1.6
Identities = 48/193 (24%), Positives = 87/193 (44%), Gaps = 20/193 (10%)
Query: 275 ITQWIFVTRCMVIPMQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKS------NM 328
+ +IFV ++ P IN + Q L+ F+IL K LK + + S ++
Sbjct: 280 VLSFIFVLMILLNPQFINHIGFQFSFLISLFIILAKPYISALKPLKCLFIISFLAQLGSI 339
Query: 329 VILLLYFSNHLW--------FLKHLPQILLAPIILLLLFHPFPQVSILLSLVLYILKIII 380
VI +F+ W F+ IL +I+ + F Q S LL+ + +L I
Sbjct: 340 VINTYHFNQFQWIGLLSNFIFVPFYSFILFPSVIIYFILIHFFQHSFLLNTYINMLFKIH 399
Query: 381 GLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTMLALLFFHLLSTLPMSYIHL 440
L+Q+ +++ +IP KLN LL L++L +F L +L + T +S++ +
Sbjct: 400 DWLVQLFLNL--NHFKWYIP--KLNQYSLLILIILTLIF--LYILVYRGFVTSVLSFLIV 453
Query: 441 ISELT*FLFTNFA 453
+ T + ++A
Sbjct: 454 LIIFTHLIRPHYA 466
>ref|YP_188731.1| competence protein ComEC/Rec2, putative [Staphylococcus epidermidis
RP62A] gi|57637708|gb|AAW54496.1| competence protein
ComEC/Rec2, putative [Staphylococcus epidermidis RP62A]
Length = 738
Score = 43.5 bits (101), Expect = 0.050
Identities = 39/153 (25%), Positives = 72/153 (46%), Gaps = 16/153 (10%)
Query: 317 LSLKLVLLKSNMVILLLYFSNHLWFLKHLPQILLAPIILLLLFHPFPQVSILLSLVLYIL 376
L++ LVL+K ++LLL ++ + F+ + + II+L+L F + SI + +++L
Sbjct: 228 LNIPLVLIKGVTILLLLIYAVYTGFVPSAMRAISIAIIILMLPIHFRKSSIHVLSFIFVL 287
Query: 377 KII--------IGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTMLALLFFH 428
I+ IG L+S+F L +I +K C+ + + LA L
Sbjct: 288 MILLNPQFINHIGFQFSFLISLFIILAKPYISALKPLKCLF--------IISFLAQLGSI 339
Query: 429 LLSTLPMSYIHLISELT*FLFTNFALFCLTKSI 461
+++T + I L+ F+F F F L S+
Sbjct: 340 VINTYHFNQFQWIGLLSNFIFVPFYSFILFPSV 372
Score = 38.9 bits (89), Expect = 1.2
Identities = 48/193 (24%), Positives = 87/193 (44%), Gaps = 20/193 (10%)
Query: 275 ITQWIFVTRCMVIPMQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKS------NM 328
+ +IFV ++ P IN + Q L+ F+IL K LK + + S ++
Sbjct: 280 VLSFIFVLMILLNPQFINHIGFQFSFLISLFIILAKPYISALKPLKCLFIISFLAQLGSI 339
Query: 329 VILLLYFSNHLW--------FLKHLPQILLAPIILLLLFHPFPQVSILLSLVLYILKIII 380
VI +F+ W F+ IL +I+ + F Q S LL+ + +L I
Sbjct: 340 VINTYHFNQFQWIGLLSNFIFVPFYSFILFPSVIIYFILIHFFQHSFLLNTYINMLFKIH 399
Query: 381 GLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTMLALLFFHLLSTLPMSYIHL 440
L+Q+ +++ +IP KLN LL L++L +F L +L + T +S++ +
Sbjct: 400 DWLVQLFLNL--NHLKWYIP--KLNQYSLLILIILTLIF--LYILVYRGFVTSVLSFLIV 453
Query: 441 ISELT*FLFTNFA 453
+ T + ++A
Sbjct: 454 LIIFTHLIRPHYA 466
>gb|EAL01803.1| hypothetical protein CaO19.4331 [Candida albicans SC5314]
Length = 185
Score = 43.5 bits (101), Expect = 0.050
Identities = 36/160 (22%), Positives = 66/160 (40%)
Query: 296 LQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSNHLWFLKHLPQILLAPIIL 355
+ L F L M+ L L + L L +++L+F L+FL L ++ + +
Sbjct: 20 IMFFLFTMVFRFLFFMILFLFLFMILFFLMILFFLMILFFLMILFFLMVLFLSMVLSLSV 79
Query: 356 LLLFHPFPQVSILLSLVLYILKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVL 415
L F + LS+V ++ + L + L F+ F + + +++ L
Sbjct: 80 FFLLFMFFFLFFFLSMVFFLFLFMFLLFFMFFLFFMFLLFFMFLLFFMFMIFLFTFMIFL 139
Query: 416 L*LFTMLALLFFHLLSTLPMSYIHLISELT*FLFTNFALF 455
F L L F + L + + L+S + FLF N+ F
Sbjct: 140 FLSFMFLLLFMFMIFLLLLIMILLLLSLMVLFLFINYLWF 179
Score = 42.0 bits (97), Expect = 0.15
Identities = 50/211 (23%), Positives = 93/211 (43%), Gaps = 28/211 (13%)
Query: 302 MKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSNHLWFLKHLPQILLAPIILLLLFHP 361
M FL++ K + + ++ MV L+F FL + L+ L++LF
Sbjct: 1 MFTFLMVFKKFITIFIFETIMFFLFTMVFRFLFFMILFLFLFMILFFLMILFFLMILFF- 59
Query: 362 FPQVSILLSLVLYILKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTM 421
+ IL L++ L +++ L S+F L + F F L++ L+L + L LF M
Sbjct: 60 ---LMILFFLMVLFLSMVLSL------SVFFLLFMFFFLFFFLSMVFFLFLFMFL-LFFM 109
Query: 422 LALLFFHLLSTLPMSYIHLISELT*FLFTNFALFCLTKSIFCLINA*YRI*NPRR*LVWV 481
L F LL + + + + FLFT F +F +F L+ +++
Sbjct: 110 FFLFFMFLLFFMFLLFFMFMI----FLFT-FMIFLFLSFMFLLL------------FMFM 152
Query: 482 IFVMVSIG*ILLHAIRSLLFLLPQVFVLQFL 512
IF+++ I +LL ++ L + ++ F+
Sbjct: 153 IFLLLLIMILLLLSLMVLFLFINYLWFFMFI 183
Score = 42.0 bits (97), Expect = 0.15
Identities = 50/213 (23%), Positives = 88/213 (40%), Gaps = 40/213 (18%)
Query: 368 LLSLVLYILKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTMLALLFF 427
+ + ++ K I + + +M + F+ F+ L L + + L L+ LF ++ L F
Sbjct: 1 MFTFLMVFKKFITIFIFETIMFFLFTMVFRFLFFMILFLFLFMILFFLMILFFLMILFFL 60
Query: 428 HLLSTLPMSYIHLISELT*F--LFTNFALFCLTKSIFCLINA*YRI*NPRR*LVWVIFVM 485
+L L + ++ ++ L+ F LF F LF +F L
Sbjct: 61 MILFFLMVLFLSMVLSLSVFFLLFMFFFLFFFLSMVFFLF-------------------- 100
Query: 486 VSIG*ILLHAIRSLLFLLPQVFVLQFL*TLVILFVLV*LFHVFL--PMLFGTLD*DICLI 543
+FLL +F L F+ L +F+L +F +FL M+F L L+
Sbjct: 101 ------------LFMFLLFFMFFLFFMFLLFFMFLLFFMFMIFLFTFMIFLFLSFMFLLL 148
Query: 544 KDCPKCIICILLFLLIIKLLVTYVTLLSKENYL 576
+ LL L++I LL++ + L NYL
Sbjct: 149 ----FMFMIFLLLLIMILLLLSLMVLFLFINYL 177
Score = 41.6 bits (96), Expect = 0.19
Identities = 37/177 (20%), Positives = 81/177 (44%), Gaps = 6/177 (3%)
Query: 254 LLRDHLNLRTIQDIALFAIGIITQWIFVTRCMVIPMQINLMLLQMLLLMKAFLILRKMVK 313
+ + + + + I F ++ +++F M++ + + ++L +++L ++ M+
Sbjct: 7 VFKKFITIFIFETIMFFLFTMVFRFLFF---MILFLFLFMILFFLMILFFLMILFFLMIL 63
Query: 314 DLPLSLKLVLLKSNMVILLLYFSNHLWFLKHLPQILLAPIILLLLFHPFPQVSILLSLVL 373
+ L L ++ S V LL+ L+F L + + + LLF F + L +
Sbjct: 64 FFLMVLFLSMVLSLSVFFLLFMFFFLFFF--LSMVFFLFLFMFLLFFMFFLFFMFLLFFM 121
Query: 374 YILKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTMLALLFFHLL 430
++L + + + M IF L F+ + +LL +M+LL L M+ LF + L
Sbjct: 122 FLLFFMFMIFLFTFM-IFLFLSFMFLLLFMFMIFLLLLIMILLLLSLMVLFLFINYL 177
>ref|XP_499191.1| PREDICTED: hypothetical protein XP_499191 [Homo sapiens]
Length = 397
Score = 43.5 bits (101), Expect = 0.050
Identities = 61/342 (17%), Positives = 142/342 (40%), Gaps = 55/342 (16%)
Query: 269 LFAIGIITQWIFVTRCMVIPMQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNM 328
LF + FVT V + ++L+ + ++ + F+ L + + + L+ ++
Sbjct: 97 LFMTMVFRTLAFVTLVFVTLVFMSLVFMTLVFMSLVFVTLVFVTLVFMSLVFMTLVFMSL 156
Query: 329 VILLLYFSNHLWFLKHLPQILLAPIILLLLFHPFPQVSILLSLVLYILKIIIGLLIQVLM 388
V + L F + L + + ++ + + L+F +S++ ++++ + + L+ L
Sbjct: 157 VFMTLVFMS----LVFMTLVFMSLVFMSLVFMTLVFMSLVFMSLVFMSLVFMTLVFMCL- 211
Query: 389 SIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTMLALLFFHLLSTLPMSYIHLISELT*FL 448
+F L F+ F+ L L+++ ++ ++L+F L+ ++ L+ F+
Sbjct: 212 -VFMTLVFMFLVFMSLVFMTLVFMSLVFMTLVFMSLVFMTLV------FMSLVFMSLVFM 264
Query: 449 FTNFALFCLTKSIFCLINA*YRI*NPRR*LVWVIFVMVSIG*ILLHAIRSLLFLLPQVFV 508
F +F LV++ V +S+ SL+F+
Sbjct: 265 SLVFMSLVFMSLVFMS-------------LVFMTLVFMSL------VFMSLVFMSLVFMT 305
Query: 509 LQFL*TLVILFVLV*LFHVFLPMLFGTLD*DICLIKDCPKCIICILLFLLIIKLLVTYVT 568
L F+ ++ LV +F VF+ ++F +L + L+F+ ++ + + ++T
Sbjct: 306 LVFM--CLVFMTLVFMFLVFMSLVFMSL-------------VFMTLVFMSLVFMSLVFMT 350
Query: 569 LLSKENYLIIPANLLLILNLNFFTLIFGVL*LKHLFMAISIF 610
L+ L+ ++L F TL+F L L +F
Sbjct: 351 LVFM---------FLVFMSLVFMTLVFMFLVFTSLVFMTLVF 383
Score = 37.7 bits (86), Expect = 2.8
Identities = 65/353 (18%), Positives = 155/353 (43%), Gaps = 35/353 (9%)
Query: 317 LSLKLVLLKSNMVILLLYFSNHLWFLKHLPQILLAPIILLLLFHPFPQVSILLSLVLYIL 376
L+ ++ S + + L++ + L + + ++ + + L+F +S++ ++++
Sbjct: 6 LAFVTLVFMSLVFVTLVFVTLVFMSLVFMTLVFMSLVFVTLVFMSLVFMSLVFMTLVFMS 65
Query: 377 KIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTMLALLFFHLLSTLPMS 436
+ + L+ L +F L + F+ L LL++ ++ + L+F L+ + +
Sbjct: 66 LVFMTLVFMSL--VFMSLVFMTLVFMTLVFVSLLFMTMVFRTLAFVTLVFVTLV-FMSLV 122
Query: 437 YIHLISELT*FLFTNFALFCLTKSIFCLINA*YRI*NPRR*LVWVIFVMVSIG*ILLHAI 496
++ L+ F+ F +F LV++ V +++ + + +
Sbjct: 123 FMTLVFMSLVFVTLVFVTLVFMSLVFMT-------------LVFMSLVFMTL--VFMSLV 167
Query: 497 RSLLFLLPQVFVLQFL*TLVILFVLV*LFHVFLPMLFGTLD*DICLIKDCPKCIICILLF 556
L + VF+ TLV + LV + VF+ ++F TL +CL + L+F
Sbjct: 168 FMTLVFMSLVFMSLVFMTLVFM-SLVFMSLVFMSLVFMTLV-FMCL-------VFMTLVF 218
Query: 557 LLIIKLLVTYVTLLSKENYLIIPANLLLILNLNFFTLIF-GVL*LKHLFMAISIF*P*LM 615
+ ++ + + ++TL+ ++ + L+ ++L F TL+F ++ + +FM++ M
Sbjct: 219 MFLVFMSLVFMTLV----FMSLVFMTLVFMSLVFMTLVFMSLVFMSLVFMSLVFMSLVFM 274
Query: 616 ILVDSYGSFYLKPKLKFLHMLKISFT*SIIIIMLLQNS*GLIMVLNSFYQIFM 668
LV F L F+ ++ +S ++ M L + M L + +FM
Sbjct: 275 SLVFMSLVFM---TLVFMSLVFMSLVFMSLVFMTLVFMCLVFMTLVFMFLVFM 324
Score = 36.2 bits (82), Expect = 8.0
Identities = 72/382 (18%), Positives = 163/382 (41%), Gaps = 28/382 (7%)
Query: 60 FRSLILMI*IAMLGSVVIISYILGF*TLFLCKLHKQLFFTNSPLMFGLSFRSVFLKLIEF 119
F SL+ + + M S+V +S + F TL L S + L F ++ + F
Sbjct: 38 FMSLVFVTLVFM--SLVFMSLV--FMTLVFMSLVFMTLVFMSLVFMSLVFMTLVFMTLVF 93
Query: 120 VSLLFALPSIISNKVLNLSLTISQR*NLFGRSSIHIVLCLCALVHIHAVVNLCVLLENFA 179
VSLLF +++ + ++L L S + + L +LV + V V +
Sbjct: 94 VSLLFM--TMVFRTLAFVTLVFV---TLVFMSLVFMTLVFMSLVFVTLVFVTLVFMSLVF 148
Query: 180 WRIK*FSFSLA*MILSQL*RLKFFLWIHFLQSTRFILWLFKKKVIIL*LLLFLV-KNLVY 238
+ S ++ L F+ + F+ S F+ +F V + + + LV +LV+
Sbjct: 149 MTLVFMSLVFMTLVFMSL----VFMTLVFM-SLVFMSLVFMTLVFMSLVFMSLVFMSLVF 203
Query: 239 L*MHQMLECPMAVVNLLRDHLNLRTIQDIALFAIGIITQWIFVTRCMVIPMQINLMLLQM 298
+ + M M +V + ++L +F + +F+T + + + L+ + +
Sbjct: 204 MTLVFMCLVFMTLVFMFLVFMSL-------VFMTLVFMSLVFMTLVFMSLVFMTLVFMSL 256
Query: 299 LLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSNHLWF-LKHLPQILLAPIILLL 357
+ + F+ L M + + L+ +V + L F + ++ L + + + + + L
Sbjct: 257 VFMSLVFMSLVFMSLVFMSLVFMSLVFMTLVFMSLVFMSLVFMSLVFMTLVFMCLVFMTL 316
Query: 358 LFHPFPQVSILLSLVLYILKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL* 417
+F +S++ ++++ + + L+ L +F L F+ F+ L L+++ +
Sbjct: 317 VFMFLVFMSLVFMSLVFMTLVFMSLVFMSL--VFMTLVFMFLVFMSLVFMTLVFMFL--- 371
Query: 418 LFTMLALLFFHLLSTLPMSYIH 439
+FT L + +S++ ++ H
Sbjct: 372 VFTSLVFMTLVFISSVTLALSH 393
>emb|CAE64507.1| Hypothetical protein CBG09235 [Caenorhabditis briggsae]
Length = 834
Score = 43.5 bits (101), Expect = 0.050
Identities = 130/538 (24%), Positives = 235/538 (43%), Gaps = 56/538 (10%)
Query: 270 FAIGIITQWIF-----VTRCMVIPMQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLL 324
F +G++ ++ + +++ + L++ +L L+ +FL+ + L LS K++L
Sbjct: 189 FLLGLLVSFLLGLGFKILLGLLVSFLLGLLVSFLLGLLVSFLLGLLVSFFLGLSFKILLG 248
Query: 325 KSNMVILLLYFSNHLWFLKHLP-QILLAPIILLLLFHPFPQVSILLSLVLYIL-----KI 378
+L L+ S FL L +ILL ++ LL F ILL L++ L KI
Sbjct: 249 LFVSFLLGLFVS----FLLGLGFEILLGILVSFLLGLGF---KILLGLLVSFLLGLGFKI 301
Query: 379 IIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTMLALLFFHLLSTLPMSYI 438
++GL + L+ + + I L L ++ +L+ LL F +L LL LL L ++
Sbjct: 302 LLGLFVSFLLGLLVSFLLGLGFKILLGL-LVSFLLGLLVSF-LLGLLVSFLLGLLVSFFL 359
Query: 439 HLISELT*FLFTNFAL-------------FCLTKSIFCLINA*YRI*NPRR*LVWVIFVM 485
L ++ LF +F L L + L+ ++I L ++ +
Sbjct: 360 GLSFKILLGLFVSFLLGLFVSFLLGLGFEILLGILVSFLLGLGFKIL-----LGLLVSFL 414
Query: 486 VSIG*-ILLHAIRSLLFLLPQVFVL----QFL*TLVILFVLV*LFHVFLPMLFG-TLD*D 539
+ +G ILL + S L L F+L + L L + F+L LF + L +L L
Sbjct: 415 LGLGFKILLGLLVSFLLGLLVSFLLGLSFKILLGLFVSFLLGLLFSILLGLLVSFLLGLL 474
Query: 540 ICLIKDCPKCIICILLFLLIIKLLVTYVTLLSKENYLIIPANLLLILNLNF-----FTLI 594
+ + I+ LL ++ LLV+++ L + L + + LL L ++F F ++
Sbjct: 475 VSFLLGLGFKILLGLLVSFLLGLLVSFLLGLGFKILLGLLVSFLLGLLVSFLLGLGFKIL 534
Query: 595 FGVL*LKHLFMAISIF*P*LM-ILVDSYGSFYLKPKLKFLHMLKISFT*SIIIIMLLQNS 653
G+L L + I L+ L+ SF L + L L +SF +++ LL
Sbjct: 535 LGLLVSFLLGLGFEILLGLLVSFLLGLLVSFLLGLGFEILLGLLVSFLLGLLVSFLL--G 592
Query: 654 *GLIMVLNSFYQIFMLQKASFIKELV*KHLNKMLE*RENINTFSMLLELCC---FNPNFP 710
G ++L + ASF+ L+ K L +L F +LL L F
Sbjct: 593 LGFEILLGLLVSFLLGLLASFLLGLLVKILLGLLVSFLLGLGFKILLGLLVSFLLGLGFK 652
Query: 711 MFSGHML-FCIQFFS*IEFQLLFSNINLLIMFYMIHCLIFILSKFLVAFVMLLHFKLI 767
+ G + F + LL S + L++ +++ L+ L LV+F+++L FK++
Sbjct: 653 ILLGFFVSFLLGLLVSFLLGLLVSFLLGLLVSFLLGLLVSFLLGLLVSFLLVLSFKIL 710
Score = 39.3 bits (90), Expect = 0.95
Identities = 115/498 (23%), Positives = 211/498 (42%), Gaps = 69/498 (13%)
Query: 279 IFVTRCMVIPMQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSNH 338
+FV+ + + +I L +L LL F IL ++ L L +L +V LL
Sbjct: 377 LFVSFLLGLGFEILLGILVSFLLGLGFKILLGLLVSFLLGLGFKILLGLLVSFLLG---- 432
Query: 339 LWFLKHLPQILLAPIILLLLFHPFPQVSILLSL-VLYILKIIIGLLIQVLMSIFAPLCIC 397
LL +L L F ILL L V ++L ++ +L+ +L+S L +
Sbjct: 433 ----------LLVSFLLGLSF------KILLGLFVSFLLGLLFSILLGLLVSFLLGLLVS 476
Query: 398 FIPFIKLNLCMLLYLMVLL*LFTMLAL-LFFHLLSTLPMSYIHLISELT*FLFTNFALFC 456
F+ + + + L + LL L L L F +L L +S+ L+ L FL
Sbjct: 477 FLLGLGFKILLGLLVSFLLGLLVSFLLGLGFKILLGLLVSF--LLGLLVSFLLGLGFKIL 534
Query: 457 LTKSIFCLINA*YRI*NPRR*LVWVIFVMVSIG*ILLHAIRSLLFLLPQVFVLQFL*TLV 516
L + L+ + I + + V +G +L+ + L F + ++ FL L+
Sbjct: 535 LGLLVSFLLGLGFEI-------LLGLLVSFLLG-LLVSFLLGLGFEILLGLLVSFLLGLL 586
Query: 517 ILFVLV*LFHVFLPMLFGTLD*DICLIKDCPKCIICILLFLLIIKLLVTYVTLLSKENYL 576
+ F+L F + L +L + + + LL +++ LLV+++ L + L
Sbjct: 587 VSFLLGLGFEILLGLL-------VSFLLGLLASFLLGLLVKILLGLLVSFLLGLGFKILL 639
Query: 577 IIPANLLLILNLNFFTLIFGVL*LKHLFMAISIF*P*LMILVDSYGSFYLKPKLKFLHML 636
+ + LL L F ++ G L + +S L +LV SF L + FL L
Sbjct: 640 GLLVSFLLGLG---FKILLGFFVSFLLGLLVSFL---LGLLV----SFLLGLLVSFLLGL 689
Query: 637 KISFT*SIIIIMLLQNS*GLIMVLNSFYQIFMLQKASFIKELV*KHLNKMLE*RENINTF 696
+SF +++ LL S +++ L + + +L SF+ L+ L +L ++
Sbjct: 690 LVSFLLGLLVSFLLVLSFKILLGLFVSFLLGLL--VSFLLGLLVSFLLGLL-----VSFL 742
Query: 697 SMLLELCCFNPNFPMFSGHMLFCIQFFS*IEFQLLFSNINLLIMFYM-------IHCLIF 749
LL +F + G + + F + F++L + LL+ F + + L+
Sbjct: 743 LGLLVSFLLGLSFKILLGIL---VSFLLGLGFKIL---LGLLVSFLLGLGFKILLGLLVS 796
Query: 750 ILSKFLVAFVMLLHFKLI 767
L LV+F++ L FK++
Sbjct: 797 FLLGLLVSFLLGLGFKIL 814
>ref|YP_241650.1| hypothetical protein XC_0549 [Xanthomonas campestris pv. campestris
str. 8004] gi|66572220|gb|AAY47630.1| conserved
hypothetical protein [Xanthomonas campestris pv.
campestris str. 8004]
Length = 103
Score = 42.7 bits (99), Expect = 0.086
Identities = 34/100 (34%), Positives = 59/100 (59%)
Query: 289 MQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSNHLWFLKHLPQI 348
M+ ++LL +LLL+ L+L ++ L L L L+LL +++LLL L L L +
Sbjct: 3 MRTAMLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL 62
Query: 349 LLAPIILLLLFHPFPQVSILLSLVLYILKIIIGLLIQVLM 388
LL ++LLLL + +LL L+L +L +++ LL+ +L+
Sbjct: 63 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL 102
Score = 42.0 bits (97), Expect = 0.15
Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 2/102 (1%)
Query: 324 LKSNMVILLLYFSNHLWFLKHLPQILLAPIILLLLFHPFPQVSILLSLVLYILKIIIGLL 383
+++ M++LLL L L L +LL ++LLLL + +LL L+L +L +++ LL
Sbjct: 3 MRTAMLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL--LLLLLLLLLLLLLLLLLLLLLL 60
Query: 384 IQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL*LFTMLALL 425
+ +L+ + L + + + L L +LL L++LL L +L LL
Sbjct: 61 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL 102
Score = 41.6 bits (96), Expect = 0.19
Identities = 34/97 (35%), Positives = 57/97 (58%)
Query: 289 MQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSNHLWFLKHLPQI 348
M + L+LL +LLL+ L+L ++ L L L L+LL +++LLL L L L +
Sbjct: 7 MLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL 66
Query: 349 LLAPIILLLLFHPFPQVSILLSLVLYILKIIIGLLIQ 385
LL ++LLLL + +LL L+L +L +++ LL++
Sbjct: 67 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLR 103
Score = 40.4 bits (93), Expect = 0.43
Identities = 33/100 (33%), Positives = 57/100 (57%)
Query: 289 MQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSNHLWFLKHLPQI 348
M + +L +LLL+ L+L ++ L L L L+LL +++LLL L L L +
Sbjct: 1 MAMRTAMLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL 60
Query: 349 LLAPIILLLLFHPFPQVSILLSLVLYILKIIIGLLIQVLM 388
LL ++LLLL + +LL L+L +L +++ LL+ +L+
Sbjct: 61 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL 100
Score = 39.7 bits (91), Expect = 0.73
Identities = 29/100 (29%), Positives = 57/100 (57%)
Query: 317 LSLKLVLLKSNMVILLLYFSNHLWFLKHLPQILLAPIILLLLFHPFPQVSILLSLVLYIL 376
++++ +L +++LLL L L L +LL ++LLLL + +LL L+L +L
Sbjct: 1 MAMRTAMLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL 60
Query: 377 KIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMVLL 416
+++ LL+ +L+ + L + + + L L +LL L++LL
Sbjct: 61 LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL 100
Score = 39.7 bits (91), Expect = 0.73
Identities = 38/123 (30%), Positives = 64/123 (51%), Gaps = 23/123 (18%)
Query: 294 MLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSNHLWFLKHLPQILLAPI 353
M MLLL+ L+L ++ L L L L+LL +++LLL +LL +
Sbjct: 3 MRTAMLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL--------------LLLLLL 48
Query: 354 ILLLLFHPFPQVSILLSLVLYILKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLM 413
+LLLL LL L+L +L +++ LL+ +L+ + L + + + L L +LL L+
Sbjct: 49 LLLLL---------LLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL 99
Query: 414 VLL 416
+LL
Sbjct: 100 LLL 102
Score = 37.0 bits (84), Expect = 4.7
Identities = 32/105 (30%), Positives = 58/105 (54%), Gaps = 7/105 (6%)
Query: 276 TQWIFVTRCMVIPMQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYF 335
T + + +++ + + L+LL +LLL+ L+L ++ L L L L+LL +++LLL
Sbjct: 5 TAMLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLLL 64
Query: 336 SNHLWFLKHLPQILLAPIILLLLFHPFPQVSILLSLVLYILKIII 380
L L L +LL ++LLLL +LL L+L +L +++
Sbjct: 65 LLLLLLLLLLLLLLLLLLLLLLLL-------LLLLLLLLLLLLLL 102
>ref|NP_059365.1| haem lyase [Cyanidioschyzon merolae] gi|7432719|pir||A58932
cytochrome C-type biogenesis protein CCMF -
Cyanidioschyzon merolae mitochondrion
gi|4115789|dbj|BAA36527.1| cytochrome C-type biogenesis
protein CCMF [Cyanidioschyzon merolae]
Length = 620
Score = 41.6 bits (96), Expect = 0.19
Identities = 75/321 (23%), Positives = 120/321 (37%), Gaps = 66/321 (20%)
Query: 278 WIFVTRCMVIPMQINLMLLQMLLLMKAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSN 337
W V ++P ++L LL LLL F I+R L S + + +YF
Sbjct: 248 WDSVEIISLLPWLLSLALLHSLLLNLKFCIIR--------------LDSLFLGMAIYF-- 291
Query: 338 HLWFLKHLPQILLAPIILLLLFHPFPQVSILLSLVLYILKIIIGLLIQVLMSIFAPLCIC 397
+ I+L LL H F L + LY + I +LI +L+ +
Sbjct: 292 -----VIIIGIILVRSGLLQSVHTFVNSPNFLIIFLYFFLVFIFILIVILLKKYTYFTSI 346
Query: 398 FIPFIKLNLCMLLYLMVLL*LFTMLALLFFHLLSTLPMSYIHLISELT*FLFTN-----F 452
F N ++L+V+L +L +L+F L L S F F N F
Sbjct: 347 FDLNNHYNFVYYIFLLVILYFLYLLFVLYFPFLIKCYNDNALLFS----FGFFNKILLLF 402
Query: 453 ALFCLTKSIFCLINA*YRI*NPRR*LVWVIFVMVSIG*ILLHAIRSLLFLLPQVFVLQFL 512
LT I LIN+ W + + + +G I++ IR P++F+ +
Sbjct: 403 IGILLTLIIIFLINS------------WKL-IFIFLGIIIIGGIRG----FPEIFLALYF 445
Query: 513 *TLVILFVLV*LFHVFLPMLFGTLD*DICLIKDCPKCIICILLFLLIIKLLVTYVTLLSK 572
++LF L I +IK I+ F I+ L + +T+ +
Sbjct: 446 FIYLLLFTL------------------ILIIKQKFSFIVYHFNFFFIM-LSLLLITIYGE 486
Query: 573 ENYLIIPANLLLILNLNFFTL 593
E L L+LN NF +
Sbjct: 487 EFILNFSIGKTLLLNDNFIII 507
>gb|AAD28358.1| MURF1 [Phytomonas serpens]
Length = 441
Score = 41.6 bits (96), Expect = 0.19
Identities = 40/152 (26%), Positives = 73/152 (47%), Gaps = 17/152 (11%)
Query: 314 DLPLSLKLVLLKSNMVILLLYFSNHLWFLKHLPQILLAPIILLLLFHPFPQVSILLSLVL 373
DL + L +V+++ + + LYF H+ ++ L +I + LLL+ F IL+
Sbjct: 73 DLRMLLFIVMVQYFCIFMFLYFI-HILYISILFEIFSLLVFLLLISSRF-GYKILILWYY 130
Query: 374 YILKIIIGLLIQVLMSIFA-----PLC-ICFIPFIKL---NLCMLLYLMVLL*LFTMLAL 424
Y++ +I LL+ +L+ LC CF+ F + LC++ ++ L L+T L +
Sbjct: 131 YMINLISFLLLIILLYFMVLNYCYYLCDFCFLIFDEEWLGILCLMYIFLITLKLYTSLLI 190
Query: 425 LFFHLLSTLPMSYIHLISELT*FLFTNFALFC 456
+ L YI L + ++ T + LFC
Sbjct: 191 TYMEQL------YIRLGIFIFIYMLTFYVLFC 216
>emb|CAH83762.1| hypothetical protein PC401526.00.0 [Plasmodium chabaudi]
Length = 228
Score = 41.6 bits (96), Expect = 0.19
Identities = 37/164 (22%), Positives = 81/164 (48%), Gaps = 5/164 (3%)
Query: 253 NLLRDHLNLRTIQDIALFAIGIITQWIFVTRCMVIPMQINLML-LQMLLLMKAFLILRKM 311
N L +HL++ ++L+ + +I+++ + I + I L + L + L + L++
Sbjct: 47 NYLSNHLSIYLYIHLSLYHFSL---FIYLSIYLSIYLSIYLSIYLSIYLSIYLSLVISIN 103
Query: 312 VKDLPLSLKLVLLKSNMVILLLYFSNHLWFLKHLPQILLAPIILLLLFHPFPQVSILLSL 371
+ + LSL + L + L +Y S +L + + + + L + +SI LS+
Sbjct: 104 LSIISLSLSIYLCIYVSMYLCIYVSMYLCIYVSIYLSIYLYLSIYLSIYLSIYLSIYLSI 163
Query: 372 VLYI-LKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCMLLYLMV 414
L I L I + L + + +SI+ +C+ + L++C+ +Y+ V
Sbjct: 164 YLSIYLSISLSLCLSIYLSIYLSVCLSVCLSVYLSVCLSVYVSV 207
Score = 36.2 bits (82), Expect = 8.0
Identities = 38/161 (23%), Positives = 68/161 (41%), Gaps = 16/161 (9%)
Query: 296 LQMLLLMKAFLILRKMVKDLPLSLKLVLLKS---NMVILLLYFSNHLWF-------LKHL 345
L + L+M +L + + L + + L + S ++ L Y SNHL L H
Sbjct: 7 LSVCLIMSVYLYIHLSLYHLSIFIYLSIYLSIYLSIYYLPNYLSNHLSIYLYIHLSLYHF 66
Query: 346 PQILLAPIILLLLFHPFPQV------SILLSLVLYILKIIIGLLIQVLMSIFAPLCICFI 399
+ I L + + + SI LSLV+ I II L + + + I+ + +C
Sbjct: 67 SLFIYLSIYLSIYLSIYLSIYLSIYLSIYLSLVISINLSIISLSLSIYLCIYVSMYLCIY 126
Query: 400 PFIKLNLCMLLYLMVLL*LFTMLALLFFHLLSTLPMSYIHL 440
+ L + + +YL + L L L++ LS Y+ +
Sbjct: 127 VSMYLCIYVSIYLSIYLYLSIYLSIYLSIYLSIYLSIYLSI 167
>gb|AAM62295.1| putative CPS repeating unit transporter Cps9vK [Streptococcus
pneumoniae]
Length = 474
Score = 41.6 bits (96), Expect = 0.19
Identities = 44/153 (28%), Positives = 79/153 (50%), Gaps = 20/153 (13%)
Query: 303 KAFLILRKMVKDLPLSLKLVLLKSNMVILLLYFSNHLWFLKHLP--QILLAPIILLLLFH 360
K F IL ++ +P+S+ L S+++ + F N+ WF + +P QIL A I + +
Sbjct: 286 KIFNIL--LLIGMPISVYLFFNASDVITFM--FGNN-WF-QSVPVFQILSASIWIQMANS 339
Query: 361 P---FPQVSILLSLVLY---------ILKIIIGLLIQVLMSIFAPLCICFIPFIKLNLCM 408
P F Q S + L+ I+ I+IGLL + +++I A L I FI + LNL +
Sbjct: 340 PIGIFYQASNRVDLLFKVGLLASGFNIIAIVIGLLSKSIVTIAAMLIISFIIGLSLNLYV 399
Query: 409 LLYLMVLL*LFTMLALLFFHLLSTLPMSYIHLI 441
L +++ + L ++ HL++ +P ++I
Sbjct: 400 LSHVVFKNDIIKYLKIILVHLVTVIPYIIFNMI 432
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.357 0.162 0.524
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,830,893,684
Number of Sequences: 2540612
Number of extensions: 67775676
Number of successful extensions: 410591
Number of sequences better than 10.0: 87
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 409678
Number of HSP's gapped (non-prelim): 487
length of query: 1390
length of database: 863,360,394
effective HSP length: 141
effective length of query: 1249
effective length of database: 505,134,102
effective search space: 630912493398
effective search space used: 630912493398
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.7 bits)
S2: 82 (36.2 bits)
Medicago: description of AC146854.1