BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146752.12 + phase: 2 /pseudo
         (127 letters)

Database: nr 
           2,540,612 sequences; 863,360,394 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_913998.1| unknown protein [Oryza sativa (japonica cultiva...    33  2.0
emb|CAC38984.1| hypothetical protein [Ascaris suum]                    32  2.7
ref|ZP_00158684.2| hypothetical protein Avar03005402 [Anabaena v...    31  7.7

>ref|NP_913998.1| unknown protein [Oryza sativa (japonica cultivar-group)]
           gi|28564643|dbj|BAC57825.1| unknown protein [Oryza
           sativa (japonica cultivar-group)]
           gi|37806462|dbj|BAC99897.1| unknown protein [Oryza
           sativa (japonica cultivar-group)]
          Length = 196

 Score = 32.7 bits (73), Expect = 2.0
 Identities = 20/59 (33%), Positives = 27/59 (44%), Gaps = 1/59 (1%)

Query: 13  GNGVGGCGCGRRNF*RSVGYYFLMFLCSLLRLMFG-SGYRTLPKVTLFVGYMICSQIRS 70
           G   GG  CG   F   +G+Y L+ LC +L  MF   G R     TL    ++C  + S
Sbjct: 128 GVTAGGEWCGGGGFWSGLGFYMLLLLCLVLCAMFADEGVRWWIPGTLLAASLLCLNLFS 186


>emb|CAC38984.1| hypothetical protein [Ascaris suum]
          Length = 371

 Score = 32.3 bits (72), Expect = 2.7
 Identities = 20/63 (31%), Positives = 29/63 (45%), Gaps = 3/63 (4%)

Query: 19  CGCGRRNF*RSVGYYFLMFLCSLLRLMFGSGYRTLPKVTLFV---GYMICSQIRSLLRFC 75
           C C   N+ R + Y     LC  +   +G G+ T+  + LF    G+  C    SLL +C
Sbjct: 128 CFCSLFNWCRRLFYRSWCRLCRCVSTRWGHGFVTVRVIPLFAVAAGFHCCWSFCSLLNWC 187

Query: 76  RML 78
           R L
Sbjct: 188 RRL 190


>ref|ZP_00158684.2| hypothetical protein Avar03005402 [Anabaena variabilis ATCC 29413]
          Length = 460

 Score = 30.8 bits (68), Expect = 7.7
 Identities = 12/21 (57%), Positives = 14/21 (66%)

Query: 6   GGKGVVVGNGVGGCGCGRRNF 26
           GG+G   GNG  GC C RRN+
Sbjct: 148 GGRGGRGGNGTAGCNCRRRNW 168


  Database: nr
    Posted date:  Jul 5, 2005 12:34 AM
  Number of letters in database: 863,360,394
  Number of sequences in database:  2,540,612
  
Lambda     K      H
   0.358    0.167    0.583 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,656,473
Number of Sequences: 2540612
Number of extensions: 6666068
Number of successful extensions: 35214
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 35211
Number of HSP's gapped (non-prelim): 5
length of query: 127
length of database: 863,360,394
effective HSP length: 103
effective length of query: 24
effective length of database: 601,677,358
effective search space: 14440256592
effective search space used: 14440256592
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.7 bits)
S2: 68 (30.8 bits)