BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146571.7 + phase: 0 /pseudo
(2018 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC82450.1| catalytic subunit of polymerase zeta [Arabidopsi... 1325 0.0
gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from... 1325 0.0
gb|AAG52299.1| putative DNA polymerase zeta catalytic subunit [A... 1252 0.0
ref|XP_479444.1| DNA polymerase zeta catalytic subunit-like prot... 1126 0.0
emb|CAI20998.1| REV3-like, catalytic subunit of DNA polymerase z... 692 0.0
emb|CAI20997.1| REV3-like, catalytic subunit of DNA polymerase z... 692 0.0
gb|AAT74627.1| REV3-like, catalytic subunit of DNA polymerase ze... 692 0.0
ref|NP_002903.1| REV3-like, catalytic subunit of DNA polymerase ... 692 0.0
gb|AAB88486.1| DNA polymerase zeta [Homo sapiens] 692 0.0
gb|AAD40184.1| DNA polymerase zeta catalytic subunit [Homo sapie... 692 0.0
gb|EAA70967.1| hypothetical protein FG08898.1 [Gibberella zeae P... 691 0.0
ref|NP_035394.1| REV3-like, catalytic subunit of DNA polymerase ... 691 0.0
gb|AAC98785.1| DNA polymerase zeta catalytic subunit [Mus muscul... 691 0.0
ref|XP_539084.1| PREDICTED: similar to DNA polymerase zeta catal... 689 0.0
gb|EAL92890.1| DNA polymerase zeta catalytic subunit, putative [... 680 0.0
dbj|BAA11461.1| DNA polymerase [Mus musculus] 666 0.0
gb|EAA60359.1| hypothetical protein AN4789.2 [Aspergillus nidula... 660 0.0
gb|EAL24900.1| GA15135-PA [Drosophila pseudoobscura] 616 e-174
gb|AAF59191.2| CG1925-PA [Drosophila melanogaster] gi|24586371|r... 612 e-173
gb|AAL13918.1| LD40801p [Drosophila melanogaster] 612 e-173
>dbj|BAC82450.1| catalytic subunit of polymerase zeta [Arabidopsis thaliana]
gi|42563023|ref|NP_176917.2| DNA polymerase family B
protein [Arabidopsis thaliana]
Length = 1890
Score = 1325 bits (3428), Expect = 0.0
Identities = 682/1064 (64%), Positives = 824/1064 (77%), Gaps = 42/1064 (3%)
Query: 970 EDDEMPGNALDV-FLPISARNSQKQKKPWNKCVTIETPRSSGTKGVSTYYQNDGSHLYLL 1028
+ DE GN+ D+ F P+ +++++KK + + ++ G+ ++ NDGS+LYLL
Sbjct: 853 QHDEYEGNSNDIPFFPLE--DNKEEKKHFFQGTSL---------GIPLHHLNDGSNLYLL 901
Query: 1029 TPNILPPSAGSVQRWLFCDERDQEPDAEDQDVPKCTSGPLRHTPDQMRQEPGAKDKDISK 1088
TP PPS SV +W+ D+ D D+E Q PLR + GA D++
Sbjct: 902 TPAFSPPSVDSVLQWISNDKGDSNIDSEKQ--------PLRDN----HNDRGASFTDLAS 949
Query: 1089 CASGPTLRPELHQD------------TEKKLPCINEGQTERIKAHMDHSQDISQISGPGE 1136
++ ++ + Q TE ++ +G + SQ++SQISGP
Sbjct: 950 ASNVVSVSEHVEQHNNLFVNSESNAYTESEIDLKPKGTFLNLNLQASVSQELSQISGPDG 1009
Query: 1137 KSSFTPLSQIGFQDPASAGHGQQLALLSIEVLAESRGDLLPDPQFDAVNIVALGFQKDCD 1196
KS TPLSQ+GF+DPAS G GQQL +LSIEV AESRGDL PDP+FD+VN++AL Q D
Sbjct: 1010 KSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIALVVQNDDS 1069
Query: 1197 ATVEVLVLLHSKFVPCQRSLDGLSDCKVLNFTDEKHLLKEFTKIVSSSDPDILMGWEIQG 1256
EV VLL S QR++DGLS CK+ F +E+ L + F + + DPD+L+GW+IQG
Sbjct: 1070 FVAEVFVLLFSPDSIDQRNVDGLSGCKLSVFLEERQLFRYFIETLCKWDPDVLLGWDIQG 1129
Query: 1257 SSLGFLAERASHLGFGLLNDLSRTPSNSWINSQDIKTSEKSILEPDIPDTTSLDCCARES 1316
S+GFLAERA+ LG LN++SRTPS + N+ D K + L +PD + E
Sbjct: 1130 GSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNKRKLGNNL---LPDPLVANPAQVEE 1186
Query: 1317 SIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSVEAVAEAVLRRKVPSLNHNVL 1376
+IEDEWGRTHASGVHVGGRIVLN WRLIRGEVKLN+Y++EAV+EAVLR+KVPS+ + VL
Sbjct: 1187 VVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKVL 1246
Query: 1377 TKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSELARVFGIDFFSVLSRGSQY 1436
T+WFS GP ARY+CI+Y++ RA LNLEI++QLDM+NRTSELARVFGIDFFSVLSRGSQY
Sbjct: 1247 TEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVFGIDFFSVLSRGSQY 1306
Query: 1437 RVESMFLRLAHTQNYVAISPGNQQVASQPAMECLPLVMEPESGFYSDPVVVLDFQSLYPS 1496
RVESM LRLAHTQNY+AISPGNQQVASQPAMEC+PLVMEPES FY DPV+VLDFQSLYPS
Sbjct: 1307 RVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVMEPESAFYDDPVIVLDFQSLYPS 1366
Query: 1497 MIIAYNLCFCTCLGKVVPSKTNTLGVSPFVPEQHILQDLKDQILLTPNGVMFVPSKIRRG 1556
MIIAYNLCF TCLGK+ K NTLGVS + + +LQDL +QIL TPN VM+VP ++RRG
Sbjct: 1367 MIIAYNLCFSTCLGKLAHLKMNTLGVSSYSLDLDVLQDL-NQILQTPNSVMYVPPEVRRG 1425
Query: 1557 VLPRLLEEILSTRIMVKQAMKKLSPSEQVLQRIFNARQLALKLISNVTYGYTAAGFSGRM 1616
+LPRLLEEILSTRIMVK+AMKKL+PSE VL RIFNARQLALKLI+NVTYGYTAAGFSGRM
Sbjct: 1426 ILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANVTYGYTAAGFSGRM 1485
Query: 1617 PCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSMFVLLKGRTAKEAFQIGSE 1676
PCAELADSIVQCGR TLEKAISFVN ++ WNA+V+YGDTDSMFVLLKGRT KEAF +G E
Sbjct: 1486 PCAELADSIVQCGRSTLEKAISFVNANDNWNARVVYGDTDSMFVLLKGRTVKEAFVVGQE 1545
Query: 1677 IASAITAMNPSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQIEPVFDAKGIETVRRDTC 1736
IASAIT MNP PVTLKMEKVYHPCFL+TKKRYVGYSYE+PNQ EP+FDAKGIETVRRDTC
Sbjct: 1546 IASAITEMNPHPVTLKMEKVYHPCFLLTKKRYVGYSYESPNQREPIFDAKGIETVRRDTC 1605
Query: 1737 EAVAKIMEQSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLKDFIFAKEVRLGTYSARIS 1796
EAVAK MEQSLRLFFE +++ +VK+YL RQWKRILSGRVSL+DFIFAKEVRLGTYS R S
Sbjct: 1606 EAVAKTMEQSLRLFFEQKNISKVKSYLYRQWKRILSGRVSLQDFIFAKEVRLGTYSTRDS 1665
Query: 1797 S-LPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGEPGARLVDMVVDPLEVLAIDSPFRI 1855
S LPPAAIVATK+M+ D R EPRYAER+PYVVIHGEPGARLVDMVVDPL +L +D+P+R+
Sbjct: 1666 SLLPPAAIVATKSMKADPRTEPRYAERVPYVVIHGEPGARLVDMVVDPLVLLDVDTPYRL 1725
Query: 1856 NDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPVREASVKHAF-TPNFQRTRIDYYYL 1914
NDLYYINKQIIPALQRVFGLVGADLNQWF EMPR R + + + N +TRIDY+YL
Sbjct: 1726 NDLYYINKQIIPALQRVFGLVGADLNQWFLEMPRLTRSSLGQRPLNSKNSHKTRIDYFYL 1785
Query: 1915 SKHCVLCGGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQHLVSICQHCGGGDRLL 1974
SKHC+LCG +VQ SA+LC++C +N+ AAA ++ KT+KLE+EMQHL +IC+HCGGGD ++
Sbjct: 1786 SKHCILCGEVVQESAQLCNRCLQNKSAAAATIVWKTSKLEREMQHLATICRHCGGGDWVV 1845
Query: 1975 ESGVKCTSISCLVFYERRKVQKELLAATHVAADKGFYPRCTVEW 2018
+SGVKC S++C VFYERRKVQKEL + +A + YP+C EW
Sbjct: 1846 QSGVKCNSLACSVFYERRKVQKELRGLSSIATESELYPKCMAEW 1889
Score = 405 bits (1041), Expect = e-111
Identities = 206/362 (56%), Positives = 263/362 (71%), Gaps = 14/362 (3%)
Query: 1 MSDSESNSDVFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTC 60
M+DS+S S+VFS+RIVS+D+YMASPIP +I +S+F +VNEVPVIR+YGSTPAGQKTC
Sbjct: 1 MADSQSGSNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTC 60
Query: 61 LHIHGALPYLYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLKGSADSSRQHVHGCSLVR 120
LHIH ALPYLY+ CS+IPL+ + D T ++ LEKALKLKG+A S RQH+H C +VR
Sbjct: 61 LHIHRALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGNAASKRQHIHDCEIVR 120
Query: 121 AKKFYGYCSFEEFFVKIYLRYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQFLVDY 180
AKKFYGY S EE FVKIYL Y+P DV+RAA+LLLAGAVL KSLQP+ESHIPFILQFLVDY
Sbjct: 121 AKKFYGYHSTEEAFVKIYLSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQFLVDY 180
Query: 181 NLYGMGHLHLSKMRFRHPMPDSIHKK----SDINSQH------RKADPGAEACLESKIWM 230
NLYGMGH+H+SKM+FR P+P + D Q KA+ A A + +W
Sbjct: 181 NLYGMGHVHISKMKFRSPVPHHFRPRRFDLDDCPGQRIDEVAITKANSSAAASVSFPVWS 240
Query: 231 SSTISFDWMWSLPSES----GGSSNDNTHSPKRQSICELEGDISVDEILNQQFKMFSSLS 286
STI WMW+L ES S + + H +RQS+CELEGD + +ILNQQFKM++SLS
Sbjct: 241 LSTIPGQWMWNLSEESDTPLSQSQHRHQHHYRRQSLCELEGDATSSDILNQQFKMYNSLS 300
Query: 287 QTSSNVNMVQSLVSIWEEQRKRSGIHEATMLSDSGKPLPEDVMKLLSSGLDFEKKLIQLC 346
Q S+ NMVQSLV+IWEE+ +R+G+H+A + D GKP DV++ +S + F L ++
Sbjct: 301 QAQSDTNMVQSLVAIWEEEYERTGVHDAPIPPDPGKPSAADVLQTMSDYVGFGNMLKEML 360
Query: 347 SE 348
++
Sbjct: 361 NK 362
Score = 120 bits (302), Expect = 4e-25
Identities = 92/269 (34%), Positives = 137/269 (50%), Gaps = 14/269 (5%)
Query: 430 QLKRLKSQNLLKWLATSQAAEDINSDDELACETILSPLPPAATIDKMLEKANMAYESESQ 489
Q++ ++ L KW A+SQAAEDINSDDE+ ETILSPL P A+I+K+LE A+ Y S+SQ
Sbjct: 439 QIQDAEALGLFKWFASSQAAEDINSDDEILRETILSPLLPLASINKVLEMASTDYVSQSQ 498
Query: 490 QECQDILDSIDDMLALDLPKKKPSRSFDHNCPIEASSDNMIPQVDGSNDDEFSSPCASLA 549
+ECQDILDS +++ K+ S + + SSD +++ ++D SS +
Sbjct: 499 KECQDILDSQENLPDFGSSTKRALPSNPDSQNLRTSSDKQSLEIEVASDVPDSSTSNGAS 558
Query: 550 EISSAVEINSEYKRASENHLLHNTDTSTVNTDKRNRQWGSLPFSMTGKVNNDGEHATSQV 609
E S S+ SE N S N N WG LPF++T + D + +
Sbjct: 559 ENSFRRYRKSDL-HTSEVMEYKNRSFSKSNKPS-NSVWGPLPFTLTKNLQKDFDSTNA-- 614
Query: 610 AHLFERETEDSSLSDYLTRNEIKNNKYIKRNVGEGASD---SKEVHSLVNCSLRDLMRRK 666
+ + +S Y NE+ +N + V E +D + + + L CSLRDLMR+K
Sbjct: 615 ----SDKLGLTKISSY-PMNEMTDNYIVP--VKEHQADVCNTIDRNVLAGCSLRDLMRKK 667
Query: 667 RSYRVEHDERESGTAKKLNLDRHGGTKTC 695
R E + ++K+ RHG C
Sbjct: 668 RLCHGESPVSQHMKSRKVRDSRHGEKNEC 696
>gb|AAC18785.1| Similar to putative DNA polymerase gb|M29683 from S. cerevisiae.
[Arabidopsis thaliana] gi|7484936|pir||T02155
DNA-directed DNA polymerase homolog T1F15.3 - Arabidopsis
thaliana
Length = 1894
Score = 1325 bits (3428), Expect = 0.0
Identities = 682/1064 (64%), Positives = 824/1064 (77%), Gaps = 42/1064 (3%)
Query: 970 EDDEMPGNALDV-FLPISARNSQKQKKPWNKCVTIETPRSSGTKGVSTYYQNDGSHLYLL 1028
+ DE GN+ D+ F P+ +++++KK + + ++ G+ ++ NDGS+LYLL
Sbjct: 857 QHDEYEGNSNDIPFFPLE--DNKEEKKHFFQGTSL---------GIPLHHLNDGSNLYLL 905
Query: 1029 TPNILPPSAGSVQRWLFCDERDQEPDAEDQDVPKCTSGPLRHTPDQMRQEPGAKDKDISK 1088
TP PPS SV +W+ D+ D D+E Q PLR + GA D++
Sbjct: 906 TPAFSPPSVDSVLQWISNDKGDSNIDSEKQ--------PLRDN----HNDRGASFTDLAS 953
Query: 1089 CASGPTLRPELHQD------------TEKKLPCINEGQTERIKAHMDHSQDISQISGPGE 1136
++ ++ + Q TE ++ +G + SQ++SQISGP
Sbjct: 954 ASNVVSVSEHVEQHNNLFVNSESNAYTESEIDLKPKGTFLNLNLQASVSQELSQISGPDG 1013
Query: 1137 KSSFTPLSQIGFQDPASAGHGQQLALLSIEVLAESRGDLLPDPQFDAVNIVALGFQKDCD 1196
KS TPLSQ+GF+DPAS G GQQL +LSIEV AESRGDL PDP+FD+VN++AL Q D
Sbjct: 1014 KSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIALVVQNDDS 1073
Query: 1197 ATVEVLVLLHSKFVPCQRSLDGLSDCKVLNFTDEKHLLKEFTKIVSSSDPDILMGWEIQG 1256
EV VLL S QR++DGLS CK+ F +E+ L + F + + DPD+L+GW+IQG
Sbjct: 1074 FVAEVFVLLFSPDSIDQRNVDGLSGCKLSVFLEERQLFRYFIETLCKWDPDVLLGWDIQG 1133
Query: 1257 SSLGFLAERASHLGFGLLNDLSRTPSNSWINSQDIKTSEKSILEPDIPDTTSLDCCARES 1316
S+GFLAERA+ LG LN++SRTPS + N+ D K + L +PD + E
Sbjct: 1134 GSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNKRKLGNNL---LPDPLVANPAQVEE 1190
Query: 1317 SIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSVEAVAEAVLRRKVPSLNHNVL 1376
+IEDEWGRTHASGVHVGGRIVLN WRLIRGEVKLN+Y++EAV+EAVLR+KVPS+ + VL
Sbjct: 1191 VVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKVL 1250
Query: 1377 TKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSELARVFGIDFFSVLSRGSQY 1436
T+WFS GP ARY+CI+Y++ RA LNLEI++QLDM+NRTSELARVFGIDFFSVLSRGSQY
Sbjct: 1251 TEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVFGIDFFSVLSRGSQY 1310
Query: 1437 RVESMFLRLAHTQNYVAISPGNQQVASQPAMECLPLVMEPESGFYSDPVVVLDFQSLYPS 1496
RVESM LRLAHTQNY+AISPGNQQVASQPAMEC+PLVMEPES FY DPV+VLDFQSLYPS
Sbjct: 1311 RVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVMEPESAFYDDPVIVLDFQSLYPS 1370
Query: 1497 MIIAYNLCFCTCLGKVVPSKTNTLGVSPFVPEQHILQDLKDQILLTPNGVMFVPSKIRRG 1556
MIIAYNLCF TCLGK+ K NTLGVS + + +LQDL +QIL TPN VM+VP ++RRG
Sbjct: 1371 MIIAYNLCFSTCLGKLAHLKMNTLGVSSYSLDLDVLQDL-NQILQTPNSVMYVPPEVRRG 1429
Query: 1557 VLPRLLEEILSTRIMVKQAMKKLSPSEQVLQRIFNARQLALKLISNVTYGYTAAGFSGRM 1616
+LPRLLEEILSTRIMVK+AMKKL+PSE VL RIFNARQLALKLI+NVTYGYTAAGFSGRM
Sbjct: 1430 ILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANVTYGYTAAGFSGRM 1489
Query: 1617 PCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSMFVLLKGRTAKEAFQIGSE 1676
PCAELADSIVQCGR TLEKAISFVN ++ WNA+V+YGDTDSMFVLLKGRT KEAF +G E
Sbjct: 1490 PCAELADSIVQCGRSTLEKAISFVNANDNWNARVVYGDTDSMFVLLKGRTVKEAFVVGQE 1549
Query: 1677 IASAITAMNPSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQIEPVFDAKGIETVRRDTC 1736
IASAIT MNP PVTLKMEKVYHPCFL+TKKRYVGYSYE+PNQ EP+FDAKGIETVRRDTC
Sbjct: 1550 IASAITEMNPHPVTLKMEKVYHPCFLLTKKRYVGYSYESPNQREPIFDAKGIETVRRDTC 1609
Query: 1737 EAVAKIMEQSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLKDFIFAKEVRLGTYSARIS 1796
EAVAK MEQSLRLFFE +++ +VK+YL RQWKRILSGRVSL+DFIFAKEVRLGTYS R S
Sbjct: 1610 EAVAKTMEQSLRLFFEQKNISKVKSYLYRQWKRILSGRVSLQDFIFAKEVRLGTYSTRDS 1669
Query: 1797 S-LPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGEPGARLVDMVVDPLEVLAIDSPFRI 1855
S LPPAAIVATK+M+ D R EPRYAER+PYVVIHGEPGARLVDMVVDPL +L +D+P+R+
Sbjct: 1670 SLLPPAAIVATKSMKADPRTEPRYAERVPYVVIHGEPGARLVDMVVDPLVLLDVDTPYRL 1729
Query: 1856 NDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPVREASVKHAF-TPNFQRTRIDYYYL 1914
NDLYYINKQIIPALQRVFGLVGADLNQWF EMPR R + + + N +TRIDY+YL
Sbjct: 1730 NDLYYINKQIIPALQRVFGLVGADLNQWFLEMPRLTRSSLGQRPLNSKNSHKTRIDYFYL 1789
Query: 1915 SKHCVLCGGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQHLVSICQHCGGGDRLL 1974
SKHC+LCG +VQ SA+LC++C +N+ AAA ++ KT+KLE+EMQHL +IC+HCGGGD ++
Sbjct: 1790 SKHCILCGEVVQESAQLCNRCLQNKSAAAATIVWKTSKLEREMQHLATICRHCGGGDWVV 1849
Query: 1975 ESGVKCTSISCLVFYERRKVQKELLAATHVAADKGFYPRCTVEW 2018
+SGVKC S++C VFYERRKVQKEL + +A + YP+C EW
Sbjct: 1850 QSGVKCNSLACSVFYERRKVQKELRGLSSIATESELYPKCMAEW 1893
Score = 399 bits (1026), Expect = e-109
Identities = 206/366 (56%), Positives = 263/366 (71%), Gaps = 18/366 (4%)
Query: 1 MSDSESNSDVFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTC 60
M+DS+S S+VFS+RIVS+D+YMASPIP +I +S+F +VNEVPVIR+YGSTPAGQKTC
Sbjct: 1 MADSQSGSNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTC 60
Query: 61 LHIHGALPYLYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLKGSADSSRQHVHGCSLVR 120
LHIH ALPYLY+ CS+IPL+ + D T ++ LEKALKLKG+A S RQH+H C +VR
Sbjct: 61 LHIHRALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGNAASKRQHIHDCEIVR 120
Query: 121 AKKFYGYCSFEEFFVKIYL----RYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQF 176
AKKFYGY S EE FVKIYL Y+P DV+RAA+LLLAGAVL KSLQP+ESHIPFILQF
Sbjct: 121 AKKFYGYHSTEEAFVKIYLYPYSSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQF 180
Query: 177 LVDYNLYGMGHLHLSKMRFRHPMPDSIHKK----SDINSQH------RKADPGAEACLES 226
LVDYNLYGMGH+H+SKM+FR P+P + D Q KA+ A A +
Sbjct: 181 LVDYNLYGMGHVHISKMKFRSPVPHHFRPRRFDLDDCPGQRIDEVAITKANSSAAASVSF 240
Query: 227 KIWMSSTISFDWMWSLPSES----GGSSNDNTHSPKRQSICELEGDISVDEILNQQFKMF 282
+W STI WMW+L ES S + + H +RQS+CELEGD + +ILNQQFKM+
Sbjct: 241 PVWSLSTIPGQWMWNLSEESDTPLSQSQHRHQHHYRRQSLCELEGDATSSDILNQQFKMY 300
Query: 283 SSLSQTSSNVNMVQSLVSIWEEQRKRSGIHEATMLSDSGKPLPEDVMKLLSSGLDFEKKL 342
+SLSQ S+ NMVQSLV+IWEE+ +R+G+H+A + D GKP DV++ +S + F L
Sbjct: 301 NSLSQAQSDTNMVQSLVAIWEEEYERTGVHDAPIPPDPGKPSAADVLQTMSDYVGFGNML 360
Query: 343 IQLCSE 348
++ ++
Sbjct: 361 KEMLNK 366
Score = 120 bits (302), Expect = 4e-25
Identities = 92/269 (34%), Positives = 137/269 (50%), Gaps = 14/269 (5%)
Query: 430 QLKRLKSQNLLKWLATSQAAEDINSDDELACETILSPLPPAATIDKMLEKANMAYESESQ 489
Q++ ++ L KW A+SQAAEDINSDDE+ ETILSPL P A+I+K+LE A+ Y S+SQ
Sbjct: 443 QIQDAEALGLFKWFASSQAAEDINSDDEILRETILSPLLPLASINKVLEMASTDYVSQSQ 502
Query: 490 QECQDILDSIDDMLALDLPKKKPSRSFDHNCPIEASSDNMIPQVDGSNDDEFSSPCASLA 549
+ECQDILDS +++ K+ S + + SSD +++ ++D SS +
Sbjct: 503 KECQDILDSQENLPDFGSSTKRALPSNPDSQNLRTSSDKQSLEIEVASDVPDSSTSNGAS 562
Query: 550 EISSAVEINSEYKRASENHLLHNTDTSTVNTDKRNRQWGSLPFSMTGKVNNDGEHATSQV 609
E S S+ SE N S N N WG LPF++T + D + +
Sbjct: 563 ENSFRRYRKSDL-HTSEVMEYKNRSFSKSNKPS-NSVWGPLPFTLTKNLQKDFDSTNA-- 618
Query: 610 AHLFERETEDSSLSDYLTRNEIKNNKYIKRNVGEGASD---SKEVHSLVNCSLRDLMRRK 666
+ + +S Y NE+ +N + V E +D + + + L CSLRDLMR+K
Sbjct: 619 ----SDKLGLTKISSY-PMNEMTDNYIVP--VKEHQADVCNTIDRNVLAGCSLRDLMRKK 671
Query: 667 RSYRVEHDERESGTAKKLNLDRHGGTKTC 695
R E + ++K+ RHG C
Sbjct: 672 RLCHGESPVSQHMKSRKVRDSRHGEKNEC 700
>gb|AAG52299.1| putative DNA polymerase zeta catalytic subunit [Arabidopsis thaliana]
gi|25404675|pir||D96698 probable DNA polymerase zeta
catalytic subunit F12B7.5 [imported] - Arabidopsis
thaliana
Length = 1871
Score = 1252 bits (3239), Expect = 0.0
Identities = 656/1038 (63%), Positives = 793/1038 (76%), Gaps = 42/1038 (4%)
Query: 970 EDDEMPGNALDV-FLPISARNSQKQKKPWNKCVTIETPRSSGTKGVSTYYQNDGSHLYLL 1028
+ DE GN+ D+ F P+ +++++KK + + ++ G+ ++ NDGS+LYLL
Sbjct: 857 QHDEYEGNSNDIPFFPLE--DNKEEKKHFFQGTSL---------GIPLHHLNDGSNLYLL 905
Query: 1029 TPNILPPSAGSVQRWLFCDERDQEPDAEDQDVPKCTSGPLRHTPDQMRQEPGAKDKDISK 1088
TP PPS SV +W+ D+ D D+E Q PLR + GA D++
Sbjct: 906 TPAFSPPSVDSVLQWISNDKGDSNIDSEKQ--------PLRDN----HNDRGASFTDLAS 953
Query: 1089 CASGPTLRPELHQD------------TEKKLPCINEGQTERIKAHMDHSQDISQISGPGE 1136
++ ++ + Q TE ++ +G + SQ++SQISGP
Sbjct: 954 ASNVVSVSEHVEQHNNLFVNSESNAYTESEIDLKPKGTFLNLNLQASVSQELSQISGPDG 1013
Query: 1137 KSSFTPLSQIGFQDPASAGHGQQLALLSIEVLAESRGDLLPDPQFDAVNIVALGFQKDCD 1196
KS TPLSQ+GF+DPAS G GQQL +LSIEV AESRGDL PDP+FD+VN++AL Q D
Sbjct: 1014 KSGPTPLSQMGFRDPASMGAGQQLTILSIEVHAESRGDLRPDPRFDSVNVIALVVQNDDS 1073
Query: 1197 ATVEVLVLLHSKFVPCQRSLDGLSDCKVLNFTDEKHLLKEFTKIVSSSDPDILMGWEIQG 1256
EV VLL S QR++DGLS CK+ F +E+ L + F + + DPD+L+GW+IQG
Sbjct: 1074 FVAEVFVLLFSPDSIDQRNVDGLSGCKLSVFLEERQLFRYFIETLCKWDPDVLLGWDIQG 1133
Query: 1257 SSLGFLAERASHLGFGLLNDLSRTPSNSWINSQDIKTSEKSILEPDIPDTTSLDCCARES 1316
S+GFLAERA+ LG LN++SRTPS + N+ D K + L +PD + E
Sbjct: 1134 GSIGFLAERAAQLGIRFLNNISRTPSPTTTNNSDNKRKLGNNL---LPDPLVANPAQVEE 1190
Query: 1317 SIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSVEAVAEAVLRRKVPSLNHNVL 1376
+IEDEWGRTHASGVHVGGRIVLN WRLIRGEVKLN+Y++EAV+EAVLR+KVPS+ + VL
Sbjct: 1191 VVIEDEWGRTHASGVHVGGRIVLNAWRLIRGEVKLNMYTIEAVSEAVLRQKVPSIPYKVL 1250
Query: 1377 TKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSELARVFGIDFFSVLSRGSQY 1436
T+WFS GP ARY+CI+Y++ RA LNLEI++QLDM+NRTSELARVFGIDFFSVLSRGSQY
Sbjct: 1251 TEWFSSGPAGARYRCIEYVIRRANLNLEIMSQLDMINRTSELARVFGIDFFSVLSRGSQY 1310
Query: 1437 RVESMFLRLAHTQNYVAISPGNQQVASQPAMECLPLVMEPESGFYSDPVVVLDFQSLYPS 1496
RVESM LRLAHTQNY+AISPGNQQVASQPAMEC+PLVMEPES FY DPV+VLDFQSLYPS
Sbjct: 1311 RVESMLLRLAHTQNYLAISPGNQQVASQPAMECVPLVMEPESAFYDDPVIVLDFQSLYPS 1370
Query: 1497 MIIAYNLCFCTCLGKVVPSKTNTLGVSPFVPEQHILQDLKDQILLTPNGVMFVPSKIRRG 1556
MIIAYNLCF TCLGK+ K NTLGVS + + +LQDL +QIL TPN VM+VP ++RRG
Sbjct: 1371 MIIAYNLCFSTCLGKLAHLKMNTLGVSSYSLDLDVLQDL-NQILQTPNSVMYVPPEVRRG 1429
Query: 1557 VLPRLLEEILSTRIMVKQAMKKLSPSEQVLQRIFNARQLALKLISNVTYGYTAAGFSGRM 1616
+LPRLLEEILSTRIMVK+AMKKL+PSE VL RIFNARQLALKLI+NVTYGYTAAGFSGRM
Sbjct: 1430 ILPRLLEEILSTRIMVKKAMKKLTPSEAVLHRIFNARQLALKLIANVTYGYTAAGFSGRM 1489
Query: 1617 PCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSMFVLLKGRTAKEAFQIGSE 1676
PCAELADSIVQCGR TLEKAISFVN ++ WNA+V+YGDTDSMFVLLKGRT KEAF +G E
Sbjct: 1490 PCAELADSIVQCGRSTLEKAISFVNANDNWNARVVYGDTDSMFVLLKGRTVKEAFVVGQE 1549
Query: 1677 IASAITAMNPSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQIEPVFDAKGIETVRRDTC 1736
IASAIT MNP PVTLKMEKVYHPCFL+TKKRYVGYSYE+PNQ EP+FDAKGIETVRRDTC
Sbjct: 1550 IASAITEMNPHPVTLKMEKVYHPCFLLTKKRYVGYSYESPNQREPIFDAKGIETVRRDTC 1609
Query: 1737 EAVAKIMEQSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLKDFIFAKEVRLGTYSARIS 1796
EAVAK MEQSLRLFFE +++ +VK+YL RQWKRILSGRVSL+DFIFAKEVRLGTYS R S
Sbjct: 1610 EAVAKTMEQSLRLFFEQKNISKVKSYLYRQWKRILSGRVSLQDFIFAKEVRLGTYSTRDS 1669
Query: 1797 S-LPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGEPGARLVDMVVDPLEVLAIDSPFRI 1855
S LPPAAIVATK+M+ D R EPRYAER+PYVVIHGEPGARLVDMVVDPL +L +D+P+R+
Sbjct: 1670 SLLPPAAIVATKSMKADPRTEPRYAERVPYVVIHGEPGARLVDMVVDPLVLLDVDTPYRL 1729
Query: 1856 NDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPVREASVKHAF-TPNFQRTRIDYYYL 1914
NDLYYINKQIIPALQRVFGLVGADLNQWF EMPR R + + + N +TRIDY+YL
Sbjct: 1730 NDLYYINKQIIPALQRVFGLVGADLNQWFLEMPRLTRSSLGQRPLNSKNSHKTRIDYFYL 1789
Query: 1915 SKHCVLCGGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQHLVSICQHCGGGDRLL 1974
SKHC+LCG +VQ SA+LC++C +N+ AAA ++ KT+KLE+EMQHL ++ LL
Sbjct: 1790 SKHCILCGEVVQESAQLCNRCLQNKSAAAATIVWKTSKLEREMQHLATVSTPKSNVYELL 1849
Query: 1975 ESGVKCTSISCLVFYERR 1992
++ V T+I L +R
Sbjct: 1850 QNLVTFTTIILLSLLSKR 1867
Score = 399 bits (1026), Expect = e-109
Identities = 206/366 (56%), Positives = 263/366 (71%), Gaps = 18/366 (4%)
Query: 1 MSDSESNSDVFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTC 60
M+DS+S S+VFS+RIVS+D+YMASPIP +I +S+F +VNEVPVIR+YGSTPAGQKTC
Sbjct: 1 MADSQSGSNVFSLRIVSIDYYMASPIPGYNICYSSFQGSEVNEVPVIRIYGSTPAGQKTC 60
Query: 61 LHIHGALPYLYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLKGSADSSRQHVHGCSLVR 120
LHIH ALPYLY+ CS+IPL+ + D T ++ LEKALKLKG+A S RQH+H C +VR
Sbjct: 61 LHIHRALPYLYIPCSEIPLEHHKGVDGSTLALSLELEKALKLKGNAASKRQHIHDCEIVR 120
Query: 121 AKKFYGYCSFEEFFVKIYL----RYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQF 176
AKKFYGY S EE FVKIYL Y+P DV+RAA+LLLAGAVL KSLQP+ESHIPFILQF
Sbjct: 121 AKKFYGYHSTEEAFVKIYLYPYSSYHPPDVARAASLLLAGAVLGKSLQPYESHIPFILQF 180
Query: 177 LVDYNLYGMGHLHLSKMRFRHPMPDSIHKK----SDINSQH------RKADPGAEACLES 226
LVDYNLYGMGH+H+SKM+FR P+P + D Q KA+ A A +
Sbjct: 181 LVDYNLYGMGHVHISKMKFRSPVPHHFRPRRFDLDDCPGQRIDEVAITKANSSAAASVSF 240
Query: 227 KIWMSSTISFDWMWSLPSES----GGSSNDNTHSPKRQSICELEGDISVDEILNQQFKMF 282
+W STI WMW+L ES S + + H +RQS+CELEGD + +ILNQQFKM+
Sbjct: 241 PVWSLSTIPGQWMWNLSEESDTPLSQSQHRHQHHYRRQSLCELEGDATSSDILNQQFKMY 300
Query: 283 SSLSQTSSNVNMVQSLVSIWEEQRKRSGIHEATMLSDSGKPLPEDVMKLLSSGLDFEKKL 342
+SLSQ S+ NMVQSLV+IWEE+ +R+G+H+A + D GKP DV++ +S + F L
Sbjct: 301 NSLSQAQSDTNMVQSLVAIWEEEYERTGVHDAPIPPDPGKPSAADVLQTMSDYVGFGNML 360
Query: 343 IQLCSE 348
++ ++
Sbjct: 361 KEMLNK 366
Score = 120 bits (302), Expect = 4e-25
Identities = 92/269 (34%), Positives = 137/269 (50%), Gaps = 14/269 (5%)
Query: 430 QLKRLKSQNLLKWLATSQAAEDINSDDELACETILSPLPPAATIDKMLEKANMAYESESQ 489
Q++ ++ L KW A+SQAAEDINSDDE+ ETILSPL P A+I+K+LE A+ Y S+SQ
Sbjct: 443 QIQDAEALGLFKWFASSQAAEDINSDDEILRETILSPLLPLASINKVLEMASTDYVSQSQ 502
Query: 490 QECQDILDSIDDMLALDLPKKKPSRSFDHNCPIEASSDNMIPQVDGSNDDEFSSPCASLA 549
+ECQDILDS +++ K+ S + + SSD +++ ++D SS +
Sbjct: 503 KECQDILDSQENLPDFGSSTKRALPSNPDSQNLRTSSDKQSLEIEVASDVPDSSTSNGAS 562
Query: 550 EISSAVEINSEYKRASENHLLHNTDTSTVNTDKRNRQWGSLPFSMTGKVNNDGEHATSQV 609
E S S+ SE N S N N WG LPF++T + D + +
Sbjct: 563 ENSFRRYRKSDL-HTSEVMEYKNRSFSKSNKPS-NSVWGPLPFTLTKNLQKDFDSTNA-- 618
Query: 610 AHLFERETEDSSLSDYLTRNEIKNNKYIKRNVGEGASD---SKEVHSLVNCSLRDLMRRK 666
+ + +S Y NE+ +N + V E +D + + + L CSLRDLMR+K
Sbjct: 619 ----SDKLGLTKISSY-PMNEMTDNYIVP--VKEHQADVCNTIDRNVLAGCSLRDLMRKK 671
Query: 667 RSYRVEHDERESGTAKKLNLDRHGGTKTC 695
R E + ++K+ RHG C
Sbjct: 672 RLCHGESPVSQHMKSRKVRDSRHGEKNEC 700
>ref|XP_479444.1| DNA polymerase zeta catalytic subunit-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 1857
Score = 1126 bits (2913), Expect = 0.0
Identities = 592/979 (60%), Positives = 710/979 (72%), Gaps = 52/979 (5%)
Query: 1011 TKGVSTYYQNDGSHLYLLTPNILPPSAGSVQRWLFCDERDQEPDAEDQDVPKCTSGPLRH 1070
T GV T++QNDGS LYLLT PPS +V +WL + V G +
Sbjct: 773 TLGVPTHFQNDGSALYLLTHAFSPPSTVAVGQWL---------TQQSCSVSVSGIGHSNY 823
Query: 1071 TPDQMRQEPGAKDKDISKCASGPTLR---PELHQDTEKKLPCINEGQTERIKAHMDHSQ- 1126
+ GA + +S GP L P E + + T I+ + + +
Sbjct: 824 GEKVSVDQEGANNSTLSPYMGGPALMDDSPASKMALEHSITTFPD-DTVMIEPDLSNQEI 882
Query: 1127 -------DISQISGPGEKSSFTPLSQIGFQDPASAGHGQQLALLSIEVLAESRGDLLPDP 1179
D SQISG EK TPLSQIGF DPAS G GQQL ++SIEV+ ESRG+L PDP
Sbjct: 883 KNLADWHDFSQISGGDEKDKLTPLSQIGFCDPASIGGGQQLTIISIEVITESRGELRPDP 942
Query: 1180 QFDAVNIVALGFQKDCDATVEVLVLLHSKFVPC--QRSLDGLSDCKVLNFTDEKHLLKEF 1237
+FDA+N V+L + D D T+EV VL+ +R+LDG+S C V F E+ LL
Sbjct: 943 RFDAINAVSLAVEDDADNTIEVHVLIRGNNDSSHRRRNLDGVSGCDVNVFPGERELLNHL 1002
Query: 1238 TKIVSSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINSQDIKTSEKS 1297
+ S DPDI++GWEIQ SLGFLAERA+HLG GLL +SRTP + + E S
Sbjct: 1003 INAICSIDPDIIVGWEIQLGSLGFLAERAAHLGIGLLKRISRTPPHQMKHPPMNPVDESS 1062
Query: 1298 ILEPDIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSVE 1357
++P +S D ++S E+ W HASG+HV GRI+LNLWRL+R EVKLN YS+E
Sbjct: 1063 ---QELPGASSADDVIDDAS--ENNWSHAHASGIHVDGRIILNLWRLMRAEVKLNNYSLE 1117
Query: 1358 AVAEAVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSE 1417
AVA VLRRKVP + +L +WF+ G G+ RY+CI+Y+ R+ LNLEILNQLD+VNRTSE
Sbjct: 1118 AVANEVLRRKVPLVPTKILNRWFATGSGRGRYRCIEYVNKRSSLNLEILNQLDLVNRTSE 1177
Query: 1418 LARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAMECLPLVMEPE 1477
LARVFGIDFFSVLSRGSQ+RVESM LRL HTQNY+AISPGNQQVASQPAMECLPLVMEPE
Sbjct: 1178 LARVFGIDFFSVLSRGSQFRVESMLLRLVHTQNYLAISPGNQQVASQPAMECLPLVMEPE 1237
Query: 1478 SGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVVPSKTNTLGVSPFVPEQHILQDLKD 1537
S FYSDPVVVLDFQSLYPSMIIAYNLC+ TCLGKV PSK++ LGVS + + + DLK+
Sbjct: 1238 SAFYSDPVVVLDFQSLYPSMIIAYNLCYSTCLGKVFPSKSSVLGVSSYSADPQKIADLKN 1297
Query: 1538 QILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVLQRIFNARQLAL 1597
Q+LLTPNGV++V ++R+GVLPRLLEEILSTRIMVK+AMKKLS S++VLQRIFNARQLAL
Sbjct: 1298 QLLLTPNGVLYVQPEVRKGVLPRLLEEILSTRIMVKKAMKKLSASQKVLQRIFNARQLAL 1357
Query: 1598 KLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDS 1657
KLI+NVTYGYTAAGFSGRMPCAE+ADSIVQCGR TLE AISFVN H W A+V+YGDTD
Sbjct: 1358 KLIANVTYGYTAAGFSGRMPCAEIADSIVQCGRRTLETAISFVNQHPLWKARVVYGDTD- 1416
Query: 1658 MFVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKKRYVGYSYENPN 1717
+EAF+IG EIAS+ITAMNP PVTLK EKVYHPCFL+TKKRYVGYSYE+P
Sbjct: 1417 ---------REEAFRIGKEIASSITAMNPDPVTLKFEKVYHPCFLLTKKRYVGYSYESPE 1467
Query: 1718 QIEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSL 1777
Q EP+FDAKGIETVRRDTC AVAKI+EQS+R+ FE Q L +V++YL+RQW RILSG++S+
Sbjct: 1468 QKEPIFDAKGIETVRRDTCPAVAKILEQSIRIMFEEQDLAKVRSYLERQWTRILSGKISI 1527
Query: 1778 KDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGEPGARLV 1837
+DF+FAKEVRLGTYSAR SSLPPAAIVATKA+ D RAEPRY ER+PYVVIHGEPGARLV
Sbjct: 1528 QDFVFAKEVRLGTYSARASSLPPAAIVATKAILSDPRAEPRYGERVPYVVIHGEPGARLV 1587
Query: 1838 DMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPVREASVK 1897
DMV+DP +L + SP+R+N LYYI KQIIPALQRVFGLVGADLN+WF EMPRP+RE K
Sbjct: 1588 DMVIDPYGLLEVGSPYRLNALYYITKQIIPALQRVFGLVGADLNKWFNEMPRPIRETLAK 1647
Query: 1898 HAFTP---NFQR-----------TRIDYYYLSKHCVLCGGLVQASARLCSQCSENEVAAA 1943
+F R +RID YY+S HC++CG ++Q S C+ C NE
Sbjct: 1648 RQSASGHGSFSRLGLNKKGVGKGSRIDTYYMSSHCIICGEIIQGSDTFCNNCLRNEAVVG 1707
Query: 1944 TAVIGKTAKLEQEMQHLVS 1962
T V G+T+KLE+E+QHL +
Sbjct: 1708 TIVAGRTSKLEREIQHLAA 1726
Score = 369 bits (948), Expect = e-100
Identities = 253/694 (36%), Positives = 366/694 (52%), Gaps = 69/694 (9%)
Query: 8 SDVFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHIHGAL 67
S V SVRIVS+D+YMA P+P D S+S FH G+V EVPVIR+YGSTPAGQKTCLHIH L
Sbjct: 15 SPVLSVRIVSLDYYMAPPLPGFDFSYSHFHGGEVEEVPVIRIYGSTPAGQKTCLHIHRVL 74
Query: 68 PYLYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLKGSADSSRQHVHGCSLVRAKKFYGY 127
P+LYV C + L ++G+++ + S LEKAL+++ S S ++HVHGC+LVRAKK YGY
Sbjct: 75 PFLYVPCKEDLLHNVEKGNSFISGLLSDLEKALQIRSS--SKKKHVHGCTLVRAKKLYGY 132
Query: 128 CSFEEFFVKIYLRYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQFLVDYNLYGMGH 187
+ EE F GAVLN+ QP+ESHIP++L FL+DYNLYGMG+
Sbjct: 133 HTSEELF--------------------DGAVLNRVFQPYESHIPYLLHFLIDYNLYGMGY 172
Query: 188 LHLSKMRFRHPMPDSIHKKSDINSQ-------HRKADPGAEACLESKIWMSSTISFDWMW 240
+H++ +FR P+PD H KS ++S+ K P A + IW+SST+ +
Sbjct: 173 VHVTDFKFRPPLPDDFHPKSSLHSKVDCSTESGHKVHPDNVAIRKPTIWISSTVPHSLIL 232
Query: 241 SLPSESGGSSNDNTHSPKRQSICELEGDISVDEILNQQFKMFSSLSQTSSNVNMVQSLVS 300
+ + S N + R S LE D ++ ILN+++KM++SLSQ +++ +V+SL+S
Sbjct: 233 ASSATSHCMEGTNWNVTNRHSSLMLEADSRIEGILNEKYKMYTSLSQATADSKIVRSLLS 292
Query: 301 IWEEQRKRSGIHEATMLSDSGKPLPEDVMKLLSSGLDFEKKLIQLCSESDTTLSCTPFEK 360
IWEE + EA + D G+PL + V++ G+ +E L LC + + + P +
Sbjct: 293 IWEELEHLRLLEEAKPV-DMGRPLRDSVLRSFLHGIKYETALSMLCPKEEVSYHRVPTME 351
Query: 361 ELRYMYSQCWWKIYYILSYI-*RPNKP*NVAEKQ-T**AQHRHQLHCVKMPNCLRKGPTQ 418
E + +C + I+ I N ++ + + Q +Q+ V +G TQ
Sbjct: 352 ESEKL-EECLKSLNDIIGTITFSQNDYCSIIDSDISAGTQQENQITNVLCLEPSEEGNTQ 410
Query: 419 --VSSC*KLVKCNQLKR-------LKSQNLLKWLATSQAAEDINSDDELACETILSPLPP 469
VSS +QL ++ LL WLA+SQAAE+ +DDEL E ILSPL
Sbjct: 411 CPVSSSAAQRTSSQLFEEHEKLVDAEALGLLSWLASSQAAEEPTTDDELVNEAILSPLFS 470
Query: 470 AATIDKMLEKANMAYESESQQECQDILDSIDDMLALDLPKKKPSRSFDHNCPIEASSDNM 529
+I LE A + ++ SQQECQDILDSI ++ + P + S +S N
Sbjct: 471 KKSIAVALESAQLDFDGASQQECQDILDSIGPVIGEEQPNDQMSYRSSVRLGESSSLSNS 530
Query: 530 IPQVDGSNDDEFSSPCASLAEISSAVEINSEYK--RASENHLLHNTDTSTVNTDKRNRQ- 586
IPQ+DGS+D+ P + + +YK R +++ S+ KR
Sbjct: 531 IPQIDGSSDENKEVP-----------QEDGKYKIDRKRAGLPSYSSPQSSSKASKRGGNE 579
Query: 587 --WGSLPFSMTGK--VNNDGEHATSQVAHLFERETEDSSLSDYLTRNEIKNNKYIKRNVG 642
WGSLP S+ + +N DG H + LS KN+ N
Sbjct: 580 LLWGSLPLSIKKRSDLNADG--------HSGGAMPTEKVLSASFMSGTGKNSHANPDNTE 631
Query: 643 EGASDSKEVHSLVNCSLRDLM-RRKRSYRVEHDE 675
G+S H + S+RDLM RR+RS+R E E
Sbjct: 632 RGSSSPTGEHDPLCDSVRDLMRRRRRSFRSEQSE 665
>emb|CAI20998.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast) [Homo
sapiens] gi|56204721|emb|CAI20509.1| REV3-like, catalytic
subunit of DNA polymerase zeta (yeast) [Homo sapiens]
gi|56203517|emb|CAI19192.1| REV3-like, catalytic subunit
of DNA polymerase zeta (yeast) [Homo sapiens]
Length = 3130
Score = 692 bits (1785), Expect = 0.0
Identities = 398/946 (42%), Positives = 558/946 (58%), Gaps = 66/946 (6%)
Query: 1078 EPGAKDKDISKCASGPTLRPELHQDTEKKLPCINEGQTERIKAHMDHSQDISQISGPGEK 1137
EP + K ++ TLR L + + +N Q E SQI GP
Sbjct: 2225 EPKTQKLSNKKGSNTDTLRRVLLTQAKNQFAAVNTPQKET-----------SQIDGPSLN 2273
Query: 1138 SSFTPLSQIGFQDPASAGHG-QQLALLSIEVLAESRGDLLPDPQFDAVNIVALGFQKDCD 1196
+++ I A A H Q L L+S+E+ A +R DL PDP+FD + + D
Sbjct: 2274 NTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPICALFYCISSDTP 2333
Query: 1197 AT-------VEVLVL-----LHSKFVPCQRSL---DGLSDCKVLNFTDEKHLLKEFTKIV 1241
V+V+ + S+ + Q L G++ +V DEK L E I+
Sbjct: 2334 LPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAADEKALFHEIANII 2393
Query: 1242 SSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINSQDIKTSEKSILEP 1301
DPDIL+G+EIQ S G+L +RA+ L L +SR P D K + E
Sbjct: 2394 KRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP--------DDKIENRFAAE- 2444
Query: 1302 DIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSVEAVAE 1361
DE+G S +++ GRI LNLWR++R EV L Y+ E V+
Sbjct: 2445 ------------------RDEYGSYTMSEINIVGRITLNLWRIMRNEVALTNYTFENVSF 2486
Query: 1362 AVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSELARV 1421
VL ++ P VL+ WF R++ + + V R + NL++L QLD++ +TSE+AR+
Sbjct: 2487 HVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQLDLIGKTSEMARL 2546
Query: 1422 FGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAMECLPLVMEPESGFY 1481
FGI F VL+RGSQYRVESM LR+A NY+ ++P QQ + A +C+PL+MEPES FY
Sbjct: 2547 FGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQCVPLIMEPESRFY 2606
Query: 1482 SDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVV---PSKTNTLGVSPFVPEQHILQDLKDQ 1538
S+ V+VLDFQSLYPS++IAYN CF TCLG V G + +L ++
Sbjct: 2607 SNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDLLYQVRHD 2666
Query: 1539 ILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVLQRIFNARQLALK 1598
I ++PNGV FV +R+GVLPR+LEEIL TR MVKQ+MK ++ L R+ +ARQL LK
Sbjct: 2667 ITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRALSRMLDARQLGLK 2725
Query: 1599 LISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSM 1658
LI+NVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN +KW A+V+YGDTDSM
Sbjct: 2726 LIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTDSM 2785
Query: 1659 FVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQ 1718
FVLLKG T +++F+IG EIA A+TA NP PV LK EKVY PC L TKKRYVGY YE +Q
Sbjct: 2786 FVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYETLDQ 2845
Query: 1719 IEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLK 1778
+PVFDAKGIETVRRD+C AV+KI+E+SL+L FE + + +K Y+QRQ ++L G+ S++
Sbjct: 2846 KDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVQRQCMKLLEGKASIQ 2905
Query: 1779 DFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGEPGARLVD 1838
DFIFAKE R G++S + + PA + K + DRR+EP+ ER+PYV+I+G PG L+
Sbjct: 2906 DFIFAKEYR-GSFSYKPGACVPALELTRKMLTYDRRSEPQVGERVPYVIIYGTPGVPLIQ 2964
Query: 1839 MVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPVREASVKH 1898
+V P+EVL D R+N YYI KQI+P L R+F L+G D+ W+ E+PR + +A+
Sbjct: 2965 LVRRPVEVLQ-DPTLRLNATYYITKQILPPLARIFSLIGIDVFSWYHELPR-IHKATSSS 3022
Query: 1899 AFTPNFQRTRIDYYYLSKHCVLCGGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQ 1958
P ++ I Y+ + HC +C L Q +CS+C A + + +LE++ +
Sbjct: 3023 RSEPEGRKGTISQYFTTLHCPVCDDLTQHG--ICSKCRSQPQHVAVILNQEIRELERQQE 3080
Query: 1959 HLVSICQHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAATHV 2004
LV IC++C G + + C S++C V ++ +V +EL A ++
Sbjct: 3081 QLVKICKNCTG---CFDRHIPCVSLNCPVLFKLSRVNRELSKAPYL 3123
Score = 189 bits (480), Expect = 8e-46
Identities = 120/346 (34%), Positives = 184/346 (52%), Gaps = 30/346 (8%)
Query: 10 VFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHIHGALPY 69
+FSVRIV+ D+YMASP+ +D S + V +VPV+RV+G+TPAGQKTCLH+HG PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLK-GSADSSRQHVHGCSLVRAKKFYGYC 128
LYV Q+ ++Y +A S+++AL + G+ S+ QHV SLV FYGY
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 129 SFEEFFVKIYLRYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQFLVDYNLYGMGHL 188
E F+KIYL Y P V R LL +GA++NK QPHE+HIP++LQ +DYNLYGM +
Sbjct: 117 EKERHFMKIYL-YNPTMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLI 175
Query: 189 HLSKMRFRHPMPDSIHKKSDINSQHRKADPGAEACLESKIWMSSTISFDWMWSLPSESGG 248
+L+ ++FR +KS N+ H A ++ + +S + W +
Sbjct: 176 NLAAVKFR-----KARRKS--NTLH------ATGSCKNHLSGNSLADTLFRW---EQDEI 219
Query: 249 SSNDNTHSPKRQSICELEGDISVDEILNQQFKMFSSLSQTSSNVNMVQSLVSIWEEQRKR 308
S+ + QS CELE D +ILN+ + + L +IWE++++R
Sbjct: 220 PSSLILEGVEPQSTCELEVDAVAADILNR--------LDIEAQIGGNPGLQAIWEDEKQR 271
Query: 309 SGIHEATMLSDSGKPLPEDVMKLLSSGLDFEKKLIQLCSESDTTLS 354
T + + S F+K+L ++ ++D +++
Sbjct: 272 RRNRNETSQMSQPESQDHRFVPATESEKKFQKRLQEILKQNDFSVT 317
>emb|CAI20997.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast) [Homo
sapiens] gi|56203516|emb|CAI19191.1| REV3-like, catalytic
subunit of DNA polymerase zeta (yeast) [Homo sapiens]
Length = 3052
Score = 692 bits (1785), Expect = 0.0
Identities = 398/946 (42%), Positives = 558/946 (58%), Gaps = 66/946 (6%)
Query: 1078 EPGAKDKDISKCASGPTLRPELHQDTEKKLPCINEGQTERIKAHMDHSQDISQISGPGEK 1137
EP + K ++ TLR L + + +N Q E SQI GP
Sbjct: 2147 EPKTQKLSNKKGSNTDTLRRVLLTQAKNQFAAVNTPQKET-----------SQIDGPSLN 2195
Query: 1138 SSFTPLSQIGFQDPASAGHG-QQLALLSIEVLAESRGDLLPDPQFDAVNIVALGFQKDCD 1196
+++ I A A H Q L L+S+E+ A +R DL PDP+FD + + D
Sbjct: 2196 NTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPICALFYCISSDTP 2255
Query: 1197 AT-------VEVLVL-----LHSKFVPCQRSL---DGLSDCKVLNFTDEKHLLKEFTKIV 1241
V+V+ + S+ + Q L G++ +V DEK L E I+
Sbjct: 2256 LPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAADEKALFHEIANII 2315
Query: 1242 SSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINSQDIKTSEKSILEP 1301
DPDIL+G+EIQ S G+L +RA+ L L +SR P D K + E
Sbjct: 2316 KRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP--------DDKIENRFAAE- 2366
Query: 1302 DIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSVEAVAE 1361
DE+G S +++ GRI LNLWR++R EV L Y+ E V+
Sbjct: 2367 ------------------RDEYGSYTMSEINIVGRITLNLWRIMRNEVALTNYTFENVSF 2408
Query: 1362 AVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSELARV 1421
VL ++ P VL+ WF R++ + + V R + NL++L QLD++ +TSE+AR+
Sbjct: 2409 HVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQLDLIGKTSEMARL 2468
Query: 1422 FGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAMECLPLVMEPESGFY 1481
FGI F VL+RGSQYRVESM LR+A NY+ ++P QQ + A +C+PL+MEPES FY
Sbjct: 2469 FGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQCVPLIMEPESRFY 2528
Query: 1482 SDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVV---PSKTNTLGVSPFVPEQHILQDLKDQ 1538
S+ V+VLDFQSLYPS++IAYN CF TCLG V G + +L ++
Sbjct: 2529 SNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDLLYQVRHD 2588
Query: 1539 ILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVLQRIFNARQLALK 1598
I ++PNGV FV +R+GVLPR+LEEIL TR MVKQ+MK ++ L R+ +ARQL LK
Sbjct: 2589 ITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRALSRMLDARQLGLK 2647
Query: 1599 LISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSM 1658
LI+NVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN +KW A+V+YGDTDSM
Sbjct: 2648 LIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTDSM 2707
Query: 1659 FVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQ 1718
FVLLKG T +++F+IG EIA A+TA NP PV LK EKVY PC L TKKRYVGY YE +Q
Sbjct: 2708 FVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYETLDQ 2767
Query: 1719 IEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLK 1778
+PVFDAKGIETVRRD+C AV+KI+E+SL+L FE + + +K Y+QRQ ++L G+ S++
Sbjct: 2768 KDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVQRQCMKLLEGKASIQ 2827
Query: 1779 DFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGEPGARLVD 1838
DFIFAKE R G++S + + PA + K + DRR+EP+ ER+PYV+I+G PG L+
Sbjct: 2828 DFIFAKEYR-GSFSYKPGACVPALELTRKMLTYDRRSEPQVGERVPYVIIYGTPGVPLIQ 2886
Query: 1839 MVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPVREASVKH 1898
+V P+EVL D R+N YYI KQI+P L R+F L+G D+ W+ E+PR + +A+
Sbjct: 2887 LVRRPVEVLQ-DPTLRLNATYYITKQILPPLARIFSLIGIDVFSWYHELPR-IHKATSSS 2944
Query: 1899 AFTPNFQRTRIDYYYLSKHCVLCGGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQ 1958
P ++ I Y+ + HC +C L Q +CS+C A + + +LE++ +
Sbjct: 2945 RSEPEGRKGTISQYFTTLHCPVCDDLTQHG--ICSKCRSQPQHVAVILNQEIRELERQQE 3002
Query: 1959 HLVSICQHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAATHV 2004
LV IC++C G + + C S++C V ++ +V +EL A ++
Sbjct: 3003 QLVKICKNCTG---CFDRHIPCVSLNCPVLFKLSRVNRELSKAPYL 3045
Score = 109 bits (273), Expect = 8e-22
Identities = 80/264 (30%), Positives = 130/264 (48%), Gaps = 26/264 (9%)
Query: 92 VASSLEKALKLK-GSADSSRQHVHGCSLVRAKKFYGYCSFEEFFVKIYLRYYPQDVSRAA 150
+A S+++AL + G+ S+ QHV SLV FYGY E F+KIYL Y P V R
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYL-YNPTMVKRIC 59
Query: 151 NLLLAGAVLNKSLQPHESHIPFILQFLVDYNLYGMGHLHLSKMRFRHPMPDSIHKKSDIN 210
LL +GA++NK QPHE+HIP++LQ +DYNLYGM ++L+ ++FR +KS N
Sbjct: 60 ELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR-----KARRKS--N 112
Query: 211 SQHRKADPGAEACLESKIWMSSTISFDWMWSLPSESGGSSNDNTHSPKRQSICELEGDIS 270
+ H A ++ + +S + W + S+ + QS CELE D
Sbjct: 113 TLH------ATGSCKNHLSGNSLADTLFRW---EQDEIPSSLILEGVEPQSTCELEVDAV 163
Query: 271 VDEILNQQFKMFSSLSQTSSNVNMVQSLVSIWEEQRKRSGIHEATMLSDSGKPLPEDVMK 330
+ILN+ + + L +IWE++++R T + +
Sbjct: 164 AADILNR--------LDIEAQIGGNPGLQAIWEDEKQRRRNRNETSQMSQPESQDHRFVP 215
Query: 331 LLSSGLDFEKKLIQLCSESDTTLS 354
S F+K+L ++ ++D +++
Sbjct: 216 ATESEKKFQKRLQEILKQNDFSVT 239
>gb|AAT74627.1| REV3-like, catalytic subunit of DNA polymerase zeta (yeast) [Homo
sapiens] gi|9957536|gb|AAG09403.1| DNA polymerase zeta
catalytic subunit variant 2 [Homo sapiens]
gi|9957534|gb|AAG09402.1| DNA polymerase zeta catalytic
subunit variant 1 [Homo sapiens]
Length = 3052
Score = 692 bits (1785), Expect = 0.0
Identities = 398/946 (42%), Positives = 558/946 (58%), Gaps = 66/946 (6%)
Query: 1078 EPGAKDKDISKCASGPTLRPELHQDTEKKLPCINEGQTERIKAHMDHSQDISQISGPGEK 1137
EP + K ++ TLR L + + +N Q E SQI GP
Sbjct: 2147 EPKTQKLSNKKGSNTDTLRRVLLTQAKNQFAAVNTPQKET-----------SQIDGPSLN 2195
Query: 1138 SSFTPLSQIGFQDPASAGHG-QQLALLSIEVLAESRGDLLPDPQFDAVNIVALGFQKDCD 1196
+++ I A A H Q L L+S+E+ A +R DL PDP+FD + + D
Sbjct: 2196 NTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPICALFYCISSDTP 2255
Query: 1197 AT-------VEVLVL-----LHSKFVPCQRSL---DGLSDCKVLNFTDEKHLLKEFTKIV 1241
V+V+ + S+ + Q L G++ +V DEK L E I+
Sbjct: 2256 LPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAADEKALFHEIANII 2315
Query: 1242 SSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINSQDIKTSEKSILEP 1301
DPDIL+G+EIQ S G+L +RA+ L L +SR P D K + E
Sbjct: 2316 KRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP--------DDKIENRFAAE- 2366
Query: 1302 DIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSVEAVAE 1361
DE+G S +++ GRI LNLWR++R EV L Y+ E V+
Sbjct: 2367 ------------------RDEYGSYTMSEINIVGRITLNLWRIMRNEVALTNYTFENVSF 2408
Query: 1362 AVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSELARV 1421
VL ++ P VL+ WF R++ + + V R + NL++L QLD++ +TSE+AR+
Sbjct: 2409 HVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQLDLIGKTSEMARL 2468
Query: 1422 FGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAMECLPLVMEPESGFY 1481
FGI F VL+RGSQYRVESM LR+A NY+ ++P QQ + A +C+PL+MEPES FY
Sbjct: 2469 FGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQCVPLIMEPESRFY 2528
Query: 1482 SDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVV---PSKTNTLGVSPFVPEQHILQDLKDQ 1538
S+ V+VLDFQSLYPS++IAYN CF TCLG V G + +L ++
Sbjct: 2529 SNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDLLYQVRHD 2588
Query: 1539 ILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVLQRIFNARQLALK 1598
I ++PNGV FV +R+GVLPR+LEEIL TR MVKQ+MK ++ L R+ +ARQL LK
Sbjct: 2589 ITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRALSRMLDARQLGLK 2647
Query: 1599 LISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSM 1658
LI+NVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN +KW A+V+YGDTDSM
Sbjct: 2648 LIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTDSM 2707
Query: 1659 FVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQ 1718
FVLLKG T +++F+IG EIA A+TA NP PV LK EKVY PC L TKKRYVGY YE +Q
Sbjct: 2708 FVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYETLDQ 2767
Query: 1719 IEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLK 1778
+PVFDAKGIETVRRD+C AV+KI+E+SL+L FE + + +K Y+QRQ ++L G+ S++
Sbjct: 2768 KDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVQRQCMKLLEGKASIQ 2827
Query: 1779 DFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGEPGARLVD 1838
DFIFAKE R G++S + + PA + K + DRR+EP+ ER+PYV+I+G PG L+
Sbjct: 2828 DFIFAKEYR-GSFSYKPGACVPALELTRKMLTYDRRSEPQVGERVPYVIIYGTPGVPLIQ 2886
Query: 1839 MVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPVREASVKH 1898
+V P+EVL D R+N YYI KQI+P L R+F L+G D+ W+ E+PR + +A+
Sbjct: 2887 LVRRPVEVLQ-DPTLRLNATYYITKQILPPLARIFSLIGIDVFSWYHELPR-IHKATSSS 2944
Query: 1899 AFTPNFQRTRIDYYYLSKHCVLCGGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQ 1958
P ++ I Y+ + HC +C L Q +CS+C A + + +LE++ +
Sbjct: 2945 RSEPEGRKGTISQYFTTLHCPVCDDLTQHG--ICSKCRSQPQHVAVILNQEIRELERQQE 3002
Query: 1959 HLVSICQHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAATHV 2004
LV IC++C G + + C S++C V ++ +V +EL A ++
Sbjct: 3003 QLVKICKNCTG---CFDRHIPCVSLNCPVLFKLSRVNRELSKAPYL 3045
Score = 109 bits (273), Expect = 8e-22
Identities = 80/264 (30%), Positives = 130/264 (48%), Gaps = 26/264 (9%)
Query: 92 VASSLEKALKLK-GSADSSRQHVHGCSLVRAKKFYGYCSFEEFFVKIYLRYYPQDVSRAA 150
+A S+++AL + G+ S+ QHV SLV FYGY E F+KIYL Y P V R
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYL-YNPTMVKRIC 59
Query: 151 NLLLAGAVLNKSLQPHESHIPFILQFLVDYNLYGMGHLHLSKMRFRHPMPDSIHKKSDIN 210
LL +GA++NK QPHE+HIP++LQ +DYNLYGM ++L+ ++FR +KS N
Sbjct: 60 ELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR-----KARRKS--N 112
Query: 211 SQHRKADPGAEACLESKIWMSSTISFDWMWSLPSESGGSSNDNTHSPKRQSICELEGDIS 270
+ H A ++ + +S + W + S+ + QS CELE D
Sbjct: 113 TLH------ATGSCKNHLSGNSLADTLFRW---EQDEIPSSLILEGVEPQSTCELEVDAV 163
Query: 271 VDEILNQQFKMFSSLSQTSSNVNMVQSLVSIWEEQRKRSGIHEATMLSDSGKPLPEDVMK 330
+ILN+ + + L +IWE++++R T + +
Sbjct: 164 AADILNR--------LDIEAQIGGNPGLQAIWEDEKQRRRNRNETSQMSQPESQDHRFVP 215
Query: 331 LLSSGLDFEKKLIQLCSESDTTLS 354
S F+K+L ++ ++D +++
Sbjct: 216 ATESEKKFQKRLQEILKQNDFSVT 239
>ref|NP_002903.1| REV3-like, catalytic subunit of DNA polymerase zeta [Homo sapiens]
gi|3378172|gb|AAC28460.1| DNA polymerase zeta catalytic
subunit [Homo sapiens]
Length = 3052
Score = 692 bits (1785), Expect = 0.0
Identities = 398/946 (42%), Positives = 558/946 (58%), Gaps = 66/946 (6%)
Query: 1078 EPGAKDKDISKCASGPTLRPELHQDTEKKLPCINEGQTERIKAHMDHSQDISQISGPGEK 1137
EP + K ++ TLR L + + +N Q E SQI GP
Sbjct: 2147 EPKTQKLSNKKGSNTDTLRRVLLTQAKNQFAAVNTPQKET-----------SQIDGPSLN 2195
Query: 1138 SSFTPLSQIGFQDPASAGHG-QQLALLSIEVLAESRGDLLPDPQFDAVNIVALGFQKDCD 1196
+++ I A A H Q L L+S+E+ A +R DL PDP+FD + + D
Sbjct: 2196 NTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPICALFYCISSDTP 2255
Query: 1197 AT-------VEVLVL-----LHSKFVPCQRSL---DGLSDCKVLNFTDEKHLLKEFTKIV 1241
V+V+ + S+ + Q L G++ +V DEK L E I+
Sbjct: 2256 LPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAADEKALFHEIANII 2315
Query: 1242 SSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINSQDIKTSEKSILEP 1301
DPDIL+G+EIQ S G+L +RA+ L L +SR P D K + E
Sbjct: 2316 KRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP--------DDKIENRFAAE- 2366
Query: 1302 DIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSVEAVAE 1361
DE+G S +++ GRI LNLWR++R EV L Y+ E V+
Sbjct: 2367 ------------------RDEYGSYTMSEINIVGRITLNLWRIMRNEVALTNYTFENVSF 2408
Query: 1362 AVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSELARV 1421
VL ++ P VL+ WF R++ + + V R + NL++L QLD++ +TSE+AR+
Sbjct: 2409 HVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQLDLIGKTSEMARL 2468
Query: 1422 FGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAMECLPLVMEPESGFY 1481
FGI F VL+RGSQYRVESM LR+A NY+ ++P QQ + A +C+PL+MEPES FY
Sbjct: 2469 FGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQCVPLIMEPESRFY 2528
Query: 1482 SDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVV---PSKTNTLGVSPFVPEQHILQDLKDQ 1538
S+ V+VLDFQSLYPS++IAYN CF TCLG V G + +L ++
Sbjct: 2529 SNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDLLYQVRHD 2588
Query: 1539 ILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVLQRIFNARQLALK 1598
I ++PNGV FV +R+GVLPR+LEEIL TR MVKQ+MK ++ L R+ +ARQL LK
Sbjct: 2589 ITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRALSRMLDARQLGLK 2647
Query: 1599 LISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSM 1658
LI+NVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN +KW A+V+YGDTDSM
Sbjct: 2648 LIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTDSM 2707
Query: 1659 FVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQ 1718
FVLLKG T +++F+IG EIA A+TA NP PV LK EKVY PC L TKKRYVGY YE +Q
Sbjct: 2708 FVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYETLDQ 2767
Query: 1719 IEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLK 1778
+PVFDAKGIETVRRD+C AV+KI+E+SL+L FE + + +K Y+QRQ ++L G+ S++
Sbjct: 2768 KDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVQRQCMKLLEGKASIQ 2827
Query: 1779 DFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGEPGARLVD 1838
DFIFAKE R G++S + + PA + K + DRR+EP+ ER+PYV+I+G PG L+
Sbjct: 2828 DFIFAKEYR-GSFSYKPGACVPALELTRKMLTYDRRSEPQVGERVPYVIIYGTPGVPLIQ 2886
Query: 1839 MVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPVREASVKH 1898
+V P+EVL D R+N YYI KQI+P L R+F L+G D+ W+ E+PR + +A+
Sbjct: 2887 LVRRPVEVLQ-DPTLRLNATYYITKQILPPLARIFSLIGIDVFSWYHELPR-IHKATSSS 2944
Query: 1899 AFTPNFQRTRIDYYYLSKHCVLCGGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQ 1958
P ++ I Y+ + HC +C L Q +CS+C A + + +LE++ +
Sbjct: 2945 RSEPEGRKGTISQYFTTLHCPVCDDLTQHG--ICSKCRSQPQHVAVILNQEIRELERQQE 3002
Query: 1959 HLVSICQHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAATHV 2004
LV IC++C G + + C S++C V ++ +V +EL A ++
Sbjct: 3003 QLVKICKNCTG---CFDRHIPCVSLNCPVLFKLSRVNRELSKAPYL 3045
Score = 106 bits (265), Expect = 7e-21
Identities = 78/264 (29%), Positives = 129/264 (48%), Gaps = 26/264 (9%)
Query: 92 VASSLEKALKLK-GSADSSRQHVHGCSLVRAKKFYGYCSFEEFFVKIYLRYYPQDVSRAA 150
+A S+++AL + G+ S+ QHV SLV FYGY E F+KIYL Y P V R
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYL-YNPTMVKRIC 59
Query: 151 NLLLAGAVLNKSLQPHESHIPFILQFLVDYNLYGMGHLHLSKMRFRHPMPDSIHKKSDIN 210
LL +GA++NK QPHE+HIP++LQ +DYNLYGM ++L+ ++FR +KS N
Sbjct: 60 ELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR-----KARRKS--N 112
Query: 211 SQHRKADPGAEACLESKIWMSSTISFDWMWSLPSESGGSSNDNTHSPKRQSICELEGDIS 270
+ H A ++ + +S + W + S+ + S CEL+ D
Sbjct: 113 TLH------ATGSCKNHLSGNSLADTLFRW---EQDEIPSSLILEGVEPHSTCELQVDAV 163
Query: 271 VDEILNQQFKMFSSLSQTSSNVNMVQSLVSIWEEQRKRSGIHEATMLSDSGKPLPEDVMK 330
+ILN+ + + L +IWE++++R T + +
Sbjct: 164 AADILNR--------LDIEAQIGGNPGLQAIWEDEKQRRRNRNETSQMSQPESQDHRFVP 215
Query: 331 LLSSGLDFEKKLIQLCSESDTTLS 354
S F+K+L ++ ++D +++
Sbjct: 216 ATESEKKFQKRLQEILKQNDFSVT 239
>gb|AAB88486.1| DNA polymerase zeta [Homo sapiens]
Length = 3052
Score = 692 bits (1785), Expect = 0.0
Identities = 398/946 (42%), Positives = 558/946 (58%), Gaps = 66/946 (6%)
Query: 1078 EPGAKDKDISKCASGPTLRPELHQDTEKKLPCINEGQTERIKAHMDHSQDISQISGPGEK 1137
EP + K ++ TLR L + + +N Q E SQI GP
Sbjct: 2147 EPKTQKLSNKKGSNTDTLRRVLLTQAKNQFAAVNTPQKET-----------SQIDGPSLN 2195
Query: 1138 SSFTPLSQIGFQDPASAGHG-QQLALLSIEVLAESRGDLLPDPQFDAVNIVALGFQKDCD 1196
+++ I A A H Q L L+S+E+ A +R DL PDP+FD + + D
Sbjct: 2196 NTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPICALFYCISSDTP 2255
Query: 1197 AT-------VEVLVL-----LHSKFVPCQRSL---DGLSDCKVLNFTDEKHLLKEFTKIV 1241
V+V+ + S+ + Q L G++ +V DEK L E I+
Sbjct: 2256 LPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAADEKALFHEIANII 2315
Query: 1242 SSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINSQDIKTSEKSILEP 1301
DPDIL+G+EIQ S G+L +RA+ L L +SR P D K + E
Sbjct: 2316 KRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP--------DDKIENRFAAE- 2366
Query: 1302 DIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSVEAVAE 1361
DE+G S +++ GRI LNLWR++R EV L Y+ E V+
Sbjct: 2367 ------------------RDEYGSYTMSEINIVGRITLNLWRIMRNEVALTNYTFENVSF 2408
Query: 1362 AVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSELARV 1421
VL ++ P VL+ WF R++ + + V R + NL++L QLD++ +TSE+AR+
Sbjct: 2409 HVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQLDLIGKTSEMARL 2468
Query: 1422 FGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAMECLPLVMEPESGFY 1481
FGI F VL+RGSQYRVESM LR+A NY+ ++P QQ + A +C+PL+MEPES FY
Sbjct: 2469 FGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQCVPLIMEPESRFY 2528
Query: 1482 SDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVV---PSKTNTLGVSPFVPEQHILQDLKDQ 1538
S+ V+VLDFQSLYPS++IAYN CF TCLG V G + +L ++
Sbjct: 2529 SNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDLLYQVRHD 2588
Query: 1539 ILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVLQRIFNARQLALK 1598
I ++PNGV FV +R+GVLPR+LEEIL TR MVKQ+MK ++ L R+ +ARQL LK
Sbjct: 2589 ITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRALSRMLDARQLGLK 2647
Query: 1599 LISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSM 1658
LI+NVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN +KW A+V+YGDTDSM
Sbjct: 2648 LIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTDSM 2707
Query: 1659 FVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQ 1718
FVLLKG T +++F+IG EIA A+TA NP PV LK EKVY PC L TKKRYVGY YE +Q
Sbjct: 2708 FVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYETLDQ 2767
Query: 1719 IEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLK 1778
+PVFDAKGIETVRRD+C AV+KI+E+SL+L FE + + +K Y+QRQ ++L G+ S++
Sbjct: 2768 KDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVQRQCMKLLEGKASIQ 2827
Query: 1779 DFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGEPGARLVD 1838
DFIFAKE R G++S + + PA + K + DRR+EP+ ER+PYV+I+G PG L+
Sbjct: 2828 DFIFAKEYR-GSFSYKPGACVPALELTRKMLTYDRRSEPQVGERVPYVIIYGTPGVPLIQ 2886
Query: 1839 MVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPVREASVKH 1898
+V P+EVL D R+N YYI KQI+P L R+F L+G D+ W+ E+PR + +A+
Sbjct: 2887 LVRRPVEVLQ-DPTLRLNATYYITKQILPPLARIFSLIGIDVFSWYHELPR-IHKATSSS 2944
Query: 1899 AFTPNFQRTRIDYYYLSKHCVLCGGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQ 1958
P ++ I Y+ + HC +C L Q +CS+C A + + +LE++ +
Sbjct: 2945 RSEPEGRKGTISQYFTTLHCPVCDDLTQHG--ICSKCRSQPQHVAVILNQEIRELERQQE 3002
Query: 1959 HLVSICQHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAATHV 2004
LV IC++C G + + C S++C V ++ +V +EL A ++
Sbjct: 3003 QLVKICKNCTG---CFDRHIPCVSLNCPVLFKLSRVNRELSKAPYL 3045
Score = 106 bits (264), Expect = 9e-21
Identities = 78/264 (29%), Positives = 129/264 (48%), Gaps = 26/264 (9%)
Query: 92 VASSLEKALKLK-GSADSSRQHVHGCSLVRAKKFYGYCSFEEFFVKIYLRYYPQDVSRAA 150
+A S+++AL + G+ S+ QHV SLV FYGY E F+KIYL Y P V R
Sbjct: 1 MAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYHEKERHFMKIYL-YNPTMVKRIC 59
Query: 151 NLLLAGAVLNKSLQPHESHIPFILQFLVDYNLYGMGHLHLSKMRFRHPMPDSIHKKSDIN 210
LL +GA++NK QPHE+HIP++LQ +DYNLYGM ++L+ ++FR +KS N
Sbjct: 60 ELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLINLAAVKFR-----KARRKS--N 112
Query: 211 SQHRKADPGAEACLESKIWMSSTISFDWMWSLPSESGGSSNDNTHSPKRQSICELEGDIS 270
+ H A ++ + +S + W + S+ + S CEL+ D
Sbjct: 113 TLH------ATGSCKNHLSGNSLADTLFRW---EQDEIPSSLILEGVEPHSTCELQVDAV 163
Query: 271 VDEILNQQFKMFSSLSQTSSNVNMVQSLVSIWEEQRKRSGIHEATMLSDSGKPLPEDVMK 330
+ILN+ + + L +IWE++++R T + +
Sbjct: 164 XADILNR--------LDIEAQIGGNPGLQAIWEDEKQRRRNRNETSQMSQPESQDHRFVP 215
Query: 331 LLSSGLDFEKKLIQLCSESDTTLS 354
S F+K+L ++ ++D +++
Sbjct: 216 ATESEKKFQKRLQEILKQNDFSVT 239
>gb|AAD40184.1| DNA polymerase zeta catalytic subunit [Homo sapiens]
gi|3243260|gb|AAC24009.1| DNA polymerase zeta catalytic
subunit [Homo sapiens] gi|3913527|sp|O60673|DPOZ_HUMAN
DNA polymerase zeta catalytic subunit (hREV3)
gi|3063675|gb|AAC24357.1| DNA polymerase zeta catalytic
subunit [Homo sapiens]
Length = 3130
Score = 692 bits (1785), Expect = 0.0
Identities = 398/946 (42%), Positives = 558/946 (58%), Gaps = 66/946 (6%)
Query: 1078 EPGAKDKDISKCASGPTLRPELHQDTEKKLPCINEGQTERIKAHMDHSQDISQISGPGEK 1137
EP + K ++ TLR L + + +N Q E SQI GP
Sbjct: 2225 EPKTQKLSNKKGSNTDTLRRVLLTQAKNQFAAVNTPQKET-----------SQIDGPSLN 2273
Query: 1138 SSFTPLSQIGFQDPASAGHG-QQLALLSIEVLAESRGDLLPDPQFDAVNIVALGFQKDCD 1196
+++ I A A H Q L L+S+E+ A +R DL PDP+FD + + D
Sbjct: 2274 NTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPICALFYCISSDTP 2333
Query: 1197 AT-------VEVLVL-----LHSKFVPCQRSL---DGLSDCKVLNFTDEKHLLKEFTKIV 1241
V+V+ + S+ + Q L G++ +V DEK L E I+
Sbjct: 2334 LPDTEKTELTGVIVIDKDKTVFSQDIRYQTPLLIRSGITGLEVTYAADEKALFHEIANII 2393
Query: 1242 SSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINSQDIKTSEKSILEP 1301
DPDIL+G+EIQ S G+L +RA+ L L +SR P D K + E
Sbjct: 2394 KRYDPDILLGYEIQMHSWGYLLQRAAALSIDLCRMISRVP--------DDKIENRFAAE- 2444
Query: 1302 DIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSVEAVAE 1361
DE+G S +++ GRI LNLWR++R EV L Y+ E V+
Sbjct: 2445 ------------------RDEYGSYTMSEINIVGRITLNLWRIMRNEVALTNYTFENVSF 2486
Query: 1362 AVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSELARV 1421
VL ++ P VL+ WF R++ + + V R + NL++L QLD++ +TSE+AR+
Sbjct: 2487 HVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQLDLIGKTSEMARL 2546
Query: 1422 FGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAMECLPLVMEPESGFY 1481
FGI F VL+RGSQYRVESM LR+A NY+ ++P QQ + A +C+PL+MEPES FY
Sbjct: 2547 FGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQCVPLIMEPESRFY 2606
Query: 1482 SDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVV---PSKTNTLGVSPFVPEQHILQDLKDQ 1538
S+ V+VLDFQSLYPS++IAYN CF TCLG V G + +L ++
Sbjct: 2607 SNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLRVPPDLLYQVRHD 2666
Query: 1539 ILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVLQRIFNARQLALK 1598
I ++PNGV FV +R+GVLPR+LEEIL TR MVKQ+MK ++ L R+ +ARQL LK
Sbjct: 2667 ITVSPNGVAFVKPSVRKGVLPRMLEEILKTRFMVKQSMKAYK-QDRALSRMLDARQLGLK 2725
Query: 1599 LISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSM 1658
LI+NVT+GYT+A FSGRMPC E+ DSIV R TLE+AI VN +KW A+V+YGDTDSM
Sbjct: 2726 LIANVTFGYTSANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKWGARVVYGDTDSM 2785
Query: 1659 FVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQ 1718
FVLLKG T +++F+IG EIA A+TA NP PV LK EKVY PC L TKKRYVGY YE +Q
Sbjct: 2786 FVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKKRYVGYMYETLDQ 2845
Query: 1719 IEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLK 1778
+PVFDAKGIETVRRD+C AV+KI+E+SL+L FE + + +K Y+QRQ ++L G+ S++
Sbjct: 2846 KDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVQRQCMKLLEGKASIQ 2905
Query: 1779 DFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGEPGARLVD 1838
DFIFAKE R G++S + + PA + K + DRR+EP+ ER+PYV+I+G PG L+
Sbjct: 2906 DFIFAKEYR-GSFSYKPGACVPALELTRKMLTYDRRSEPQVGERVPYVIIYGTPGVPLIQ 2964
Query: 1839 MVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPVREASVKH 1898
+V P+EVL D R+N YYI KQI+P L R+F L+G D+ W+ E+PR + +A+
Sbjct: 2965 LVRRPVEVLQ-DPTLRLNATYYITKQILPPLARIFSLIGIDVFSWYHELPR-IHKATSSS 3022
Query: 1899 AFTPNFQRTRIDYYYLSKHCVLCGGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQ 1958
P ++ I Y+ + HC +C L Q +CS+C A + + +LE++ +
Sbjct: 3023 RSEPEGRKGTISQYFTTLHCPVCDDLTQHG--ICSKCRSQPQHVAVILNQEIRELERQQE 3080
Query: 1959 HLVSICQHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAATHV 2004
LV IC++C G + + C S++C V ++ +V +EL A ++
Sbjct: 3081 QLVKICKNCTG---CFDRHIPCVSLNCPVLFKLSRVNRELSKAPYL 3123
Score = 189 bits (480), Expect = 8e-46
Identities = 120/346 (34%), Positives = 184/346 (52%), Gaps = 30/346 (8%)
Query: 10 VFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHIHGALPY 69
+FSVRIV+ D+YMASP+ +D S + V +VPV+RV+G+TPAGQKTCLH+HG PY
Sbjct: 1 MFSVRIVTADYYMASPLQGLDTCQSPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLK-GSADSSRQHVHGCSLVRAKKFYGYC 128
LYV Q+ ++Y +A S+++AL + G+ S+ QHV SLV FYGY
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 129 SFEEFFVKIYLRYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQFLVDYNLYGMGHL 188
E F+KIYL Y P V R LL +GA++NK QPHE+HIP++LQ +DYNLYGM +
Sbjct: 117 EKERHFMKIYL-YNPTMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLI 175
Query: 189 HLSKMRFRHPMPDSIHKKSDINSQHRKADPGAEACLESKIWMSSTISFDWMWSLPSESGG 248
+L+ ++FR +KS N+ H A ++ + +S + W +
Sbjct: 176 NLAAVKFR-----KARRKS--NTLH------ATGSCKNHLSGNSLADTLFRW---EQDEI 219
Query: 249 SSNDNTHSPKRQSICELEGDISVDEILNQQFKMFSSLSQTSSNVNMVQSLVSIWEEQRKR 308
S+ + QS CELE D +ILN+ + + L +IWE++++R
Sbjct: 220 PSSLILEGVEPQSTCELEVDAVAADILNR--------LDIEAQIGGNPGLQAIWEDEKQR 271
Query: 309 SGIHEATMLSDSGKPLPEDVMKLLSSGLDFEKKLIQLCSESDTTLS 354
T + + S F+K+L ++ ++D +++
Sbjct: 272 RRNRNETSQMSQPESQDHRFVPATESEKKFQKRLQEILKQNDFSVT 317
>gb|EAA70967.1| hypothetical protein FG08898.1 [Gibberella zeae PH-1]
gi|46129445|ref|XP_389074.1| hypothetical protein
FG08898.1 [Gibberella zeae PH-1]
Length = 1681
Score = 691 bits (1784), Expect = 0.0
Identities = 385/888 (43%), Positives = 556/888 (62%), Gaps = 61/888 (6%)
Query: 1124 HSQDISQISGPGEKSSFTPLSQIGFQ-----DPASAGHG-QQLALLSIEVLAESRGDLLP 1177
H SQI GP TP ++ GF+ S H Q ++ +S+EV +RG+ +P
Sbjct: 807 HRNCHSQIEGP------TPKNRHGFKYTPGKKATSVKHEVQYMSTMSLEVHVNTRGNFVP 860
Query: 1178 DPQFDAVNIVALGFQKDCDAT--------VEVLVLLHSKFVPCQRSLDGLSDCKVLNFTD 1229
+P+ D V + D +T V+ +LL S + + + ++ T
Sbjct: 861 NPEEDEVQCAFWAIKSDGTSTDSQSSAGTVQTGILLLSNDAEFTQRVQRQTSADIIEETS 920
Query: 1230 EKHLLKEFTKIVSSSDPDILMGWEIQGSSLGFLAERAS-HLGFGLLNDLSRTPSNSWINS 1288
E L+ +IV + DPDIL G+E+ GSS G+L ERA + L ++ SR
Sbjct: 921 ELDLMVRMVEIVRNHDPDILTGYEVHGSSWGYLIERARLKYDYNLCDEFSR--------- 971
Query: 1289 QDIKTSEKSILEPDIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGE 1348
+KT D D WG S + V GR ++N+WR +RGE
Sbjct: 972 --MKTESHGRFGKD-----------------NDRWGFNTTSTIRVTGRHMVNVWRAMRGE 1012
Query: 1349 VKLNLYSVEAVAEAVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQ 1408
+ L Y++E VA +L +++P + LT W+ G + + ++Y +R KL++EIL+
Sbjct: 1013 LNLLQYTMENVAWHLLHKRIPHYSWKSLTSWYKSGKHRELNRMLRYYQNRTKLDIEILDA 1072
Query: 1409 LDMVNRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAME 1468
+++ RTSE AR+ G+DFFSV SRGSQ++VES+ R+A +N++ +SP +QV Q A+E
Sbjct: 1073 NELIARTSEQARLLGVDFFSVFSRGSQFKVESIMFRIAKPENFLLVSPSRKQVGGQNALE 1132
Query: 1469 CLPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVVPSK-TNTLGVSPFVP 1527
CLPLVMEP+S FY+ P++VLDFQSLYPS++IAYN C+ T LG+V + T+ +G + +
Sbjct: 1133 CLPLVMEPQSAFYNSPLLVLDFQSLYPSVMIAYNYCYSTFLGRVTNWRGTSKMGFTEYKR 1192
Query: 1528 EQHILQDLKDQILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVLQ 1587
+Q +L LKD I + PNG+M+ ++IR+ +L ++L EIL TR+MVK MK+ ++ LQ
Sbjct: 1193 QQGLLTLLKDYINIAPNGMMYAKTEIRKSLLAKMLTEILETRVMVKSGMKQ-DKDDKTLQ 1251
Query: 1588 RIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKWN 1647
++ N RQLALKL++NVTYGYT+A FSGRMPC+E+ADSIVQ GR TLE+AI++++ EKW
Sbjct: 1252 QLLNNRQLALKLLANVTYGYTSASFSGRMPCSEIADSIVQTGRETLERAIAYIHSVEKWG 1311
Query: 1648 AKVIYGDTDSMFVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKKR 1707
A+V+YGDTDS+F+ LKGRT EAF IG+EI+ AIT MNP P+ LK EKVYHPC L+ KKR
Sbjct: 1312 AEVVYGDTDSLFISLKGRTKDEAFDIGNEISKAITEMNPQPIKLKFEKVYHPCVLLAKKR 1371
Query: 1708 YVGYSYENPNQIEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQW 1767
YVGY YE+ +Q++P FDAKGIETVRRD A I E++LRL FE L +VK Y Q+Q
Sbjct: 1372 YVGYKYESKDQVKPEFDAKGIETVRRDGTPAEQMIEEKALRLLFETADLSQVKEYFQKQC 1431
Query: 1768 KRILSGRVSLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYVV 1827
++I+ VS++DF FAKEVRLGTYS + + P A+++TK M D RAEP+Y ER+PYVV
Sbjct: 1432 QKIMRNNVSVQDFCFAKEVRLGTYSDK-GAPPAGALISTKRMLQDARAEPQYGERVPYVV 1490
Query: 1828 IHGEPGARLVDMVVDPLEVLAIDSP-FRINDLYYINKQIIPALQRVFGLVGADLNQWFAE 1886
I G PGARL+D V P E+L D+P ++++ YYI+K +IP L+R+F LVGA++ QW+ E
Sbjct: 1491 ITGAPGARLIDRCVAPEELL--DNPHWQLDAEYYISKNLIPPLERIFNLVGANVRQWYDE 1548
Query: 1887 MPRPVREASVKHAFTPNFQRTRIDYYYLSKHCVLCG-GLVQASARLCSQCSENEVAAATA 1945
MP+ R V HA T + ++T ++ Y S HC++C Q LC C N +A +
Sbjct: 1549 MPKVQR---VHHATTLSNKKTTLESYMKSTHCLVCNIKFSQEGNPLCPTCRTNIPSALLS 1605
Query: 1946 VIGKTAKLEQEMQHLVSICQHCGGGDRLLESGVKCTSISCLVFYERRK 1993
+ + E+ +Q ++S+C+ C G + V+C S C VF+ R K
Sbjct: 1606 LQTRLTTEERCLQEILSLCRSCSGVGPV--EDVQCDSKDCPVFWTRMK 1651
Score = 155 bits (392), Expect = 1e-35
Identities = 112/342 (32%), Positives = 172/342 (49%), Gaps = 51/342 (14%)
Query: 9 DVFSVRIVSVDHYMAS-----PIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHI 63
D+F +R+ +DHY A+ P DI S +G +VP++R++G+T GQK C HI
Sbjct: 2 DLFRIRLNCIDHYQATATQYDPQLRNDIRPSQISKGP--KVPIVRIFGATETGQKVCAHI 59
Query: 64 HGALPYLYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLKGSADSSRQH---VHGCSLVR 120
HGA PYLYV L D+ G AY Y + S++ AL + D + V +LV+
Sbjct: 60 HGAFPYLYVEYEG-GLSPDEVG-AYIYRLHLSIDHALAVSYRRDQKNDNARFVARITLVK 117
Query: 121 AKKFYGYCSFEEFFVKIYLRYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQFLVDY 180
FYG+ FF+KIY+ + P ++R A+LL G ++ QP+E+H+ F+LQF+ D+
Sbjct: 118 GIPFYGFHVGYRFFLKIYM-FNPVVMTRLADLLQQGVIMKHKFQPYEAHLQFLLQFMTDF 176
Query: 181 NLYGMGHLHLSKMRFRHPMPDSIHKKSDINSQHRKADPGAEACLESKIWMSSTISFDWMW 240
NLYG +L S FR P+P+ + NS H +W S
Sbjct: 177 NLYGCDYLESSSTGFRSPVPE---YGEETNSSH--------------LWHSE-------- 211
Query: 241 SLPSESGGSSNDNTHSPKRQSICELEGDISVDEILN----QQFKMFSSLSQTS----SNV 292
S+P E D T P R S C LE DI V ILN Q+ + ++ + S++
Sbjct: 212 SIPQE---DVTDETTLP-RSSHCSLEVDICVQNILNRHRVQERPLHHDFTERTNPLPSDM 267
Query: 293 NMVQSLVSIWEEQRKRSGIHEATMLSDSGKPLPEDVMKLLSS 334
+V S+ S+W+++ KR + S+ P P +V+ +S+
Sbjct: 268 KLVYSMASLWKDETKRRK-QKMQDPSEGSSPFPPEVLVSMSA 308
>ref|NP_035394.1| REV3-like, catalytic subunit of DNA polymerase zeta RAD54 like [Mus
musculus] gi|6978946|dbj|BAA90768.1| DNA polymerase [Mus
musculus]
Length = 3122
Score = 691 bits (1782), Expect = 0.0
Identities = 389/898 (43%), Positives = 544/898 (60%), Gaps = 55/898 (6%)
Query: 1126 QDISQISGPGEKSSFTPLSQIGFQDPASAGHG-QQLALLSIEVLAESRGDLLPDPQFDAV 1184
++ SQI GP +++ I A A H Q L L+S+E+ A +R DL PDP+FD +
Sbjct: 2254 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQPDPEFDPI 2313
Query: 1185 NIVALGFQKDCDAT-------VEVLVLLHSKFVPCQ--RSL------DGLSDCKVLNFTD 1229
+ D V+V+ K V Q RS G++ +V D
Sbjct: 2314 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTHQDIRSQTPLLIRSGITGLEVTYAAD 2373
Query: 1230 EKHLLKEFTKIVSSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINSQ 1289
EK L +E T I+ DPDIL+G+EIQ S G+L +RA+ L L +SR P
Sbjct: 2374 EKALFQEITNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2425
Query: 1290 DIKTSEKSILEPDIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEV 1349
D K + E D++G S +++ GRI LNLWR++R EV
Sbjct: 2426 DDKIENRFAAE-------------------RDDYGSDTMSEINIVGRITLNLWRIMRNEV 2466
Query: 1350 KLNLYSVEAVAEAVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQL 1409
L Y+ E V+ VL ++ P VL+ WF R++ + + V R + NL++L QL
Sbjct: 2467 GLTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2526
Query: 1410 DMVNRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAMEC 1469
D++ +TSE+AR+FGI F VL+RGSQYRVESM LR+A NY+ ++P QQ + A +C
Sbjct: 2527 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPQC 2586
Query: 1470 LPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVV---PSKTNTLGVSPFV 1526
+PL+MEPES FYS+ V+VLDFQSLYPS++IAYN CF TCLG V G +
Sbjct: 2587 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2646
Query: 1527 PEQHILQDLKDQILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVL 1586
+L ++ + ++PNGV FV +R+GVLPR+LEEIL TR+MVKQ+MK ++ L
Sbjct: 2647 VPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK-QDRAL 2705
Query: 1587 QRIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKW 1646
R+ NARQL LKLI+NVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN +KW
Sbjct: 2706 SRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2765
Query: 1647 NAKVIYGDTDSMFVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKK 1706
A+V+YGDTDSMFVLLKG T +++F+IG EIA A+TA NP PV LK EKVY PC L TKK
Sbjct: 2766 GARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPRPVKLKFEKVYLPCVLQTKK 2825
Query: 1707 RYVGYSYENPNQIEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQ 1766
RYVGY YE +Q EPVFDAKGIETVRRD+C AV+KI+E+SL+L FE + + +K Y+ RQ
Sbjct: 2826 RYVGYMYETLDQKEPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVHRQ 2885
Query: 1767 WKRILSGRVSLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYV 1826
+++ G+ S++DFIFAKE R G++S R + PA + K + DRR+EPR ER+PYV
Sbjct: 2886 CMKLVEGKASIQDFIFAKEYR-GSFSYRPGACVPALELTRKMLAYDRRSEPRVGERVPYV 2944
Query: 1827 VIHGEPGARLVDMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAE 1886
+I+G PG L+ ++ P EVL D R+N YYI KQI+P L R+F L+G D+ W+ E
Sbjct: 2945 IIYGTPGLPLIQLIRRPAEVLQ-DPTLRLNATYYITKQILPPLARIFSLIGIDVFSWYQE 3003
Query: 1887 MPRPVREASVKHAFTPNFQRTRIDYYYLSKHCVLCGGLVQASARLCSQCSENEVAAATAV 1946
+PR +++A+ ++ I Y+ + HC +C L Q +CS+C A +
Sbjct: 3004 LPR-IQKATSSSRSELEGRKGTISQYFTTLHCPVCDDLTQHG--ICSKCRSQPQHVAIIL 3060
Query: 1947 IGKTAKLEQEMQHLVSICQHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAATHV 2004
+ +LE++ + L+ IC++C G + + C S++C V ++ +V +EL A ++
Sbjct: 3061 NQEIRELERKQEQLIKICRNCTGS---FDRHIPCVSLNCPVLFKLSRVNRELSKAPYL 3115
Score = 186 bits (472), Expect = 7e-45
Identities = 123/349 (35%), Positives = 190/349 (54%), Gaps = 36/349 (10%)
Query: 10 VFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHIHGALPY 69
+FSVRIV+ D+YMASP+P +D S + V +VPV+RV+G+TPAGQKTCLH+HG PY
Sbjct: 1 MFSVRIVTADYYMASPLPGLDTCQSPLTQLPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLK-GSADSSRQHVHGCSLVRAKKFYGYC 128
LYV Q+ ++Y +A S+++AL + + S+ QHV SLV FYGY
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALANPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 129 SFEEFFVKIYLRYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQFLVDYNLYGMGHL 188
E F+KIYL Y P V R LL +GA++NK QPHE+HIP++LQ +DYNLYGM +
Sbjct: 117 EKERHFMKIYL-YNPAMVKRICELLQSGAIMNKCYQPHEAHIPYLLQLFIDYNLYGMNLI 175
Query: 189 HLSKMRFRHPMPDSIHKKSDINSQHRKADPGAEACLESKIWMSSTISFDWMWSLPSESGG 248
+L+ ++FR +K N+ H A + ++ +S + W E
Sbjct: 176 NLAAVKFR-----KARRKG--NASH------ATGLFKHQLSGNSPAGTLFRW---EEDEI 219
Query: 249 SSNDNTHSPKRQSICELEGDISVDEILNQQFKMFSSLSQTSSNVNMVQSLVSIWE-EQRK 307
S+ + S CELE D +ILN+ + + L +IWE E+++
Sbjct: 220 PSSLLLEGVEPLSTCELEVDAVAADILNR--------LDIEAQIGGNPGLQAIWEDEKQR 271
Query: 308 RSGIHEATMLSDSGKPLPED--VMKLLSSGLDFEKKLIQLCSESDTTLS 354
R +E++ +S +P +D + S F+K+L ++ ++D +++
Sbjct: 272 RRNRNESSQIS---QPESQDCRFVPTTESEKQFQKRLQEVLKQNDFSVT 317
>gb|AAC98785.1| DNA polymerase zeta catalytic subunit [Mus musculus]
gi|17380486|sp|Q61493|DPOZ_MOUSE DNA polymerase zeta
catalytic subunit (Seizure-related protein 4)
Length = 3122
Score = 691 bits (1782), Expect = 0.0
Identities = 389/898 (43%), Positives = 544/898 (60%), Gaps = 55/898 (6%)
Query: 1126 QDISQISGPGEKSSFTPLSQIGFQDPASAGHG-QQLALLSIEVLAESRGDLLPDPQFDAV 1184
++ SQI GP +++ I A A H Q L L+S+E+ A +R DL PDP+FD +
Sbjct: 2254 KETSQIDGPSLNNTYGFKVSIQNLQEAKALHEIQNLTLISVELHARTRRDLQPDPEFDPI 2313
Query: 1185 NIVALGFQKDCDAT-------VEVLVLLHSKFVPCQ--RSL------DGLSDCKVLNFTD 1229
+ D V+V+ K V Q RS G++ +V D
Sbjct: 2314 CALFYCISSDTPLPDTEKTELTGVIVIDKDKTVTHQDIRSQTPLLIRSGITGLEVTYAAD 2373
Query: 1230 EKHLLKEFTKIVSSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINSQ 1289
EK L +E T I+ DPDIL+G+EIQ S G+L +RA+ L L +SR P
Sbjct: 2374 EKALFQEITNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP-------- 2425
Query: 1290 DIKTSEKSILEPDIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEV 1349
D K + E D++G S +++ GRI LNLWR++R EV
Sbjct: 2426 DDKIENRFAAE-------------------RDDYGSDTMSEINIVGRITLNLWRIMRNEV 2466
Query: 1350 KLNLYSVEAVAEAVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQL 1409
L Y+ E V+ VL ++ P VL+ WF R++ + + V R + NL++L QL
Sbjct: 2467 GLTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQL 2526
Query: 1410 DMVNRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAMEC 1469
D++ +TSE+AR+FGI F VL+RGSQYRVESM LR+A NY+ ++P QQ + A +C
Sbjct: 2527 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPQC 2586
Query: 1470 LPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVV---PSKTNTLGVSPFV 1526
+PL+MEPES FYS+ V+VLDFQSLYPS++IAYN CF TCLG V G +
Sbjct: 2587 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2646
Query: 1527 PEQHILQDLKDQILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVL 1586
+L ++ + ++PNGV FV +R+GVLPR+LEEIL TR+MVKQ+MK ++ L
Sbjct: 2647 VPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK-QDRAL 2705
Query: 1587 QRIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKW 1646
R+ NARQL LKLI+NVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN +KW
Sbjct: 2706 SRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2765
Query: 1647 NAKVIYGDTDSMFVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKK 1706
A+V+YGDTDSMFVLLKG T +++F+IG EIA A+TA NP PV LK EKVY PC L TKK
Sbjct: 2766 GARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPRPVKLKFEKVYLPCVLQTKK 2825
Query: 1707 RYVGYSYENPNQIEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQ 1766
RYVGY YE +Q EPVFDAKGIETVRRD+C AV+KI+E+SL+L FE + + +K Y+ RQ
Sbjct: 2826 RYVGYMYETLDQKEPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVHRQ 2885
Query: 1767 WKRILSGRVSLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYV 1826
+++ G+ S++DFIFAKE R G++S R + PA + K + DRR+EPR ER+PYV
Sbjct: 2886 CMKLVEGKASIQDFIFAKEYR-GSFSYRPGACVPALELTRKMLAYDRRSEPRVGERVPYV 2944
Query: 1827 VIHGEPGARLVDMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAE 1886
+I+G PG L+ ++ P EVL D R+N YYI KQI+P L R+F L+G D+ W+ E
Sbjct: 2945 IIYGTPGLPLIQLIRRPAEVLQ-DPTLRLNATYYITKQILPPLARIFSLIGIDVFSWYQE 3003
Query: 1887 MPRPVREASVKHAFTPNFQRTRIDYYYLSKHCVLCGGLVQASARLCSQCSENEVAAATAV 1946
+PR +++A+ ++ I Y+ + HC +C L Q +CS+C A +
Sbjct: 3004 LPR-IQKATSSSRSELEGRKGTISQYFTTLHCPVCDDLTQHG--ICSKCRSQPQHVAIIL 3060
Query: 1947 IGKTAKLEQEMQHLVSICQHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAATHV 2004
+ +LE++ + L+ IC++C G + + C S++C V ++ +V +EL A ++
Sbjct: 3061 NQEIRELERKQEQLIKICRNCTGS---FDRHIPCVSLNCPVLFKLSRVNRELSKAPYL 3115
Score = 188 bits (478), Expect = 1e-45
Identities = 124/349 (35%), Positives = 191/349 (54%), Gaps = 36/349 (10%)
Query: 10 VFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHIHGALPY 69
+FSVRIV+ D+YMASP+P +D S + V +VPV+RV+G+TPAGQKTCLH+HG PY
Sbjct: 1 MFSVRIVTADYYMASPLPGLDTCQSPLTQLPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLK-GSADSSRQHVHGCSLVRAKKFYGYC 128
LYV Q+ ++Y +A S+++AL + G+ S+ QHV SLV FYGY
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 129 SFEEFFVKIYLRYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQFLVDYNLYGMGHL 188
E F+KIYL Y P V R LL +GA++NK QPHE+HIP++LQ +DYNLYGM +
Sbjct: 117 EKERHFMKIYL-YNPAMVKRICELLQSGAIMNKCYQPHEAHIPYLLQLFIDYNLYGMNLI 175
Query: 189 HLSKMRFRHPMPDSIHKKSDINSQHRKADPGAEACLESKIWMSSTISFDWMWSLPSESGG 248
+L+ ++FR +K N+ H A + ++ +S + W E
Sbjct: 176 NLAAVKFR-----KARRKG--NASH------ATGLFKHQLSGNSPAGTLFRW---EEDEI 219
Query: 249 SSNDNTHSPKRQSICELEGDISVDEILNQQFKMFSSLSQTSSNVNMVQSLVSIWE-EQRK 307
S+ + S CELE D +ILN+ + + L +IWE E+++
Sbjct: 220 PSSLLLEGVEPLSTCELEVDAVAADILNR--------LDIEAQIGGNPGLQAIWEDEKQR 271
Query: 308 RSGIHEATMLSDSGKPLPED--VMKLLSSGLDFEKKLIQLCSESDTTLS 354
R +E++ +S +P +D + S F+K+L ++ ++D +++
Sbjct: 272 RRNRNESSQIS---QPESQDCRFVPATESEKQFQKRLQEVLKQNDFSVT 317
>ref|XP_539084.1| PREDICTED: similar to DNA polymerase zeta catalytic subunit (hREV3)
[Canis familiaris]
Length = 3114
Score = 689 bits (1777), Expect = 0.0
Identities = 386/898 (42%), Positives = 546/898 (59%), Gaps = 55/898 (6%)
Query: 1126 QDISQISGPGEKSSFT-PLSQIGFQDPASAGHGQQLALLSIEVLAESRGDLLPDPQFDAV 1184
++ SQI GP +++ +S Q+ + Q L L+S+E+ A +R DL PDP+FD +
Sbjct: 2246 KETSQIDGPSLNNTYGFKVSVQNLQEAKALHEIQNLTLISVELHARTRRDLEPDPEFDPI 2305
Query: 1185 NIVALGFQKDC-----DAT--VEVLVLLHSKFVPCQRSL--------DGLSDCKVLNFTD 1229
+ D D T V+V+ K V Q G++ +V D
Sbjct: 2306 CALFYCISSDTPLPDTDKTELTGVIVIDKDKTVSSQDIRYQTPLLIRSGITGLEVTYAPD 2365
Query: 1230 EKHLLKEFTKIVSSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINSQ 1289
EK L +E I+ DPDIL+G+EIQ S G+L +RA+ L L +SR P + N
Sbjct: 2366 EKALFQEIADIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLGQMISRVPDDKIENR- 2424
Query: 1290 DIKTSEKSILEPDIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEV 1349
P+ D++G S +++ GRI LNLWR++R EV
Sbjct: 2425 ---------FAPE-----------------RDDYGSETMSEINIVGRITLNLWRIMRNEV 2458
Query: 1350 KLNLYSVEAVAEAVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQL 1409
L Y+ E V+ VL ++ P VL+ WF R++ + + + R + NL++L QL
Sbjct: 2459 ALTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYISRVRGNLQMLEQL 2518
Query: 1410 DMVNRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAMEC 1469
D++ +TSE+AR+FGI F VL+RGSQYRVESM LR+A NY+ ++P QQ + A +C
Sbjct: 2519 DLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSVQQRSQMRAPQC 2578
Query: 1470 LPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVV---PSKTNTLGVSPFV 1526
+PL+MEPES FYS+ V+VLDFQSLYPS++IAYN CF TCLG V G +
Sbjct: 2579 VPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSLR 2638
Query: 1527 PEQHILQDLKDQILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVL 1586
+L ++ I ++PNG+ FV +R+GVLPR+LEEIL TR+MVKQ+MK ++ L
Sbjct: 2639 VPPDLLYQIRHDITVSPNGIAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKAYK-QDRAL 2697
Query: 1587 QRIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKW 1646
R+ +ARQL LKLI+NVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN +KW
Sbjct: 2698 SRMLDARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKKW 2757
Query: 1647 NAKVIYGDTDSMFVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKK 1706
A+V+YGDTDSMFVLLKG T +++F+IG EIA A+TA NP PV LK EKVY PC L TKK
Sbjct: 2758 GARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPKPVKLKFEKVYLPCVLQTKK 2817
Query: 1707 RYVGYSYENPNQIEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQ 1766
RYVGY YE +Q +PVFDAKGIETVRRD+C AV+KI+E+SL+L FE + + +K Y+QRQ
Sbjct: 2818 RYVGYMYETLDQKDPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVQRQ 2877
Query: 1767 WKRILSGRVSLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYV 1826
++L G+ S++DFIFAKE R G+ S + + PA + K + DRR+EPR ER+PYV
Sbjct: 2878 CMKLLEGKASIQDFIFAKEYR-GSSSYKPGACVPALELTRKMLTYDRRSEPRVGERVPYV 2936
Query: 1827 VIHGEPGARLVDMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAE 1886
+I+G PG L+ +V P+EVL D R+N YYI KQI+P L R+F L+G D+ W+ E
Sbjct: 2937 IIYGTPGVPLIQLVRRPVEVLQ-DPTLRLNATYYITKQILPPLARIFSLIGIDVFNWYHE 2995
Query: 1887 MPRPVREASVKHAFTPNFQRTRIDYYYLSKHCVLCGGLVQASARLCSQCSENEVAAATAV 1946
+PR +++A+ P ++ I Y+ + HC +C L Q +CS+C A +
Sbjct: 2996 LPR-IQKATSSSRSEPEGRKGTISQYFTTLHCPVCDDLTQHG--ICSKCRSQPQHVAVIL 3052
Query: 1947 IGKTAKLEQEMQHLVSICQHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAATHV 2004
+ +LE++ + LV IC++C G + + C S++C V ++ +V +EL A ++
Sbjct: 3053 NQEIRELERKQEQLVKICKNCTG---CFDRHIPCVSLNCPVLFKLSRVNRELSKAPYL 3107
Score = 187 bits (475), Expect = 3e-45
Identities = 120/346 (34%), Positives = 185/346 (52%), Gaps = 30/346 (8%)
Query: 10 VFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHIHGALPY 69
+FSVRIV+ D+YMASP+ +D + V +VPV+RV+G+TPAGQKTCLH+HG PY
Sbjct: 1 MFSVRIVTADYYMASPLRGLDTCLCPLTQAPVKKVPVVRVFGATPAGQKTCLHLHGIFPY 60
Query: 70 LYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLK-GSADSSRQHVHGCSLVRAKKFYGYC 128
LYV Q+ ++Y +A S+++AL + G+ S+ QHV SLV FYGY
Sbjct: 61 LYVPYDG----YGQQPESYLSQMAFSIDRALNVALGNPSSTAQHVFKVSLVSGMPFYGYH 116
Query: 129 SFEEFFVKIYLRYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQFLVDYNLYGMGHL 188
E+ F+KIYL Y P V R LL +GA++NK QPHE+HIP++LQ +DYNLYGM +
Sbjct: 117 EKEKHFMKIYL-YNPAMVKRICELLQSGAIMNKFYQPHEAHIPYLLQLFIDYNLYGMNLI 175
Query: 189 HLSKMRFRHPMPDSIHKKSDINSQHRKADPGAEACLESKIWMSSTISFDWMWSLPSESGG 248
+L+ ++FR S + + + R PG ++ T+ F W E
Sbjct: 176 NLAAVKFRKARRKSNQLHTTGSCKDRL--PGNS--------LTGTL-FRW-----EEDEI 219
Query: 249 SSNDNTHSPKRQSICELEGDISVDEILNQQFKMFSSLSQTSSNVNMVQSLVSIWEEQRKR 308
S+ + QS CELE D +ILN+ + + L +IWE++++R
Sbjct: 220 PSSLILEGVEPQSTCELEVDAVAADILNR--------LDIEAQIGGNPGLQAIWEDEKQR 271
Query: 309 SGIHEATMLSDSGKPLPEDVMKLLSSGLDFEKKLIQLCSESDTTLS 354
T + + + S +F+K+L ++ ++D +++
Sbjct: 272 RRNRNETSQINQPESQDRRFVPATESEKNFQKRLQEILKQNDFSVT 317
>gb|EAL92890.1| DNA polymerase zeta catalytic subunit, putative [Aspergillus
fumigatus Af293]
Length = 1656
Score = 680 bits (1755), Expect = 0.0
Identities = 389/884 (44%), Positives = 546/884 (61%), Gaps = 57/884 (6%)
Query: 1129 SQISGPGEKSSFT-PLSQIGFQDPASAGHGQQLALLSIEVLAESRGDLLPDPQFDAVNIV 1187
SQI GP +K+ + SQ G + + Q ++ +S+EV +RG LLP+P+ D ++ +
Sbjct: 782 SQIEGPTQKNDYGFKYSQKG-KSTSVEHQTQYMSSMSLEVHVNTRGVLLPNPEEDEISCI 840
Query: 1188 ALGFQKDCDATVEV---LVLLHSKFVPCQRSLDGLSD--CKVLNFT-----DEKHLLKEF 1237
Q D D V+V L +H + Q S DG + K L E L+
Sbjct: 841 FWCIQSD-DQDVDVNGNLPGVHVGMI-AQGSGDGPTSKLSKALRIELEHEPTELDLINRL 898
Query: 1238 TKIVSSSDPDILMGWEIQGSSLGFLAERA-SHLGFGLLNDLSRTPSNSWINSQDIKTSEK 1296
IV DPDI+ G+E+ S G+L ERA F + ++LSR + SQ +K
Sbjct: 899 VDIVRYHDPDIITGYEVHNGSWGYLIERARKKYDFDICDELSR------VRSQAHGRFDK 952
Query: 1297 SILEPDIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSV 1356
D WG H S + V GR ++N+WR +R E+ L Y++
Sbjct: 953 DA----------------------DRWGFNHTSSIRVTGRHMINIWRAMRSELNLLQYTM 990
Query: 1357 EAVAEAVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTS 1416
E V +L R++P ++ LT W+ G + + ++Y V R ++NLEIL +++ RTS
Sbjct: 991 ENVVFHLLHRRIPHYSYRDLTAWYQSGKPRDVLKVVQYYVSRIQMNLEILESNELIPRTS 1050
Query: 1417 ELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAMECLPLVMEP 1476
E AR+ GIDFFSV SRGSQ++VES+ R+A +NY+ +SP +QV Q A+ECLPLVMEP
Sbjct: 1051 EQARLLGIDFFSVFSRGSQFKVESLMFRIAKPENYLLVSPSRKQVGQQNALECLPLVMEP 1110
Query: 1477 ESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKV-VPSKTNTLGVSPFVPEQHILQDL 1535
+S FY+ P++VLDFQSLYPS++IAYN C+ T LG+V + N +G + + +L+ L
Sbjct: 1111 QSDFYTSPLLVLDFQSLYPSIMIAYNYCYSTFLGRVHLWRGRNKMGFMDYKRQPRVLELL 1170
Query: 1536 KDQILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVLQRIFNARQL 1595
KD++ + PNG+M+V ++R+ +L R+L EIL TR+MVK MK + ++ LQR+ N RQL
Sbjct: 1171 KDKVNIAPNGMMYVKPEVRQSLLARMLAEILETRVMVKAGMK-MDKDDKALQRLLNNRQL 1229
Query: 1596 ALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDT 1655
ALKLI+NVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+ ++ E+W A+V+YGDT
Sbjct: 1230 ALKLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEKAIALIHSVERWGAEVVYGDT 1289
Query: 1656 DSMFVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKKRYVGYSYEN 1715
DS+FV LKGRT EAF IG EIA A+T +NP P+ LK EKVYHPC L+ KKRYVG+ YE+
Sbjct: 1290 DSLFVYLKGRTRDEAFGIGEEIAKAVTDINPHPIKLKFEKVYHPCVLLAKKRYVGFKYEH 1349
Query: 1716 PNQIEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQWKRILSGRV 1775
NQ EP FDAKGIETVRRD A KI E++L+L F L +VK Y Q+Q +I+ GRV
Sbjct: 1350 RNQKEPEFDAKGIETVRRDGTPAEQKIEEKALKLLFRTADLTQVKRYFQKQCAKIMQGRV 1409
Query: 1776 SLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGEPGAR 1835
S++DF FAKEVRLGTYS R LPP A+++T+ M D R+EP+Y ER+PYVV+ G PG+R
Sbjct: 1410 SIQDFCFAKEVRLGTYSER-GLLPPGAMISTRKMVEDPRSEPQYGERVPYVVVTGAPGSR 1468
Query: 1836 LVDMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPVREAS 1895
LVD V P E L ++ ++ YYINK IIP L+R+F LVGA++ QW+ EMP+ R
Sbjct: 1469 LVDRCVAP-ETLLHNAELELDAEYYINKNIIPPLERIFNLVGANVRQWYEEMPKIQRIRR 1527
Query: 1896 VKHAFT---PNFQRTRIDYYYLSKHCVLC-GGLVQASARLCSQCSENEVAAATAVIGKTA 1951
++ A + + + ++ Y S C++C L +CS C + + +++ +
Sbjct: 1528 IEGAASAAGKDAKGKTLESYMKSSSCIVCKSKLDHIGIPVCSDCLQQPHISLLSLVSRQQ 1587
Query: 1952 KLEQEMQHLVSICQHCGGGDRLLESG--VKCTSISCLVFYERRK 1993
+ E+ + L ICQ C G + SG V C S C VFY R +
Sbjct: 1588 QAEKRVSDLHRICQSCMG----VPSGDDVICDSKDCPVFYSRTR 1627
Score = 97.4 bits (241), Expect = 4e-18
Identities = 75/246 (30%), Positives = 114/246 (45%), Gaps = 41/246 (16%)
Query: 95 SLEKALKL---KGSADSSRQHVHGCSLVRAKKFYGYCSFEEFFVKIYLRYYPQDVSRAAN 151
S++ AL L + + D V +LV+ FYGY FF KIYL P +R A+
Sbjct: 47 SIDHALALNYRRNAYDKKTAFVAHITLVKGVPFYGYHVGYRFFFKIYL-LDPVYTTRLAD 105
Query: 152 LLLAGAVLNKSLQPHESHIPFILQFLVDYNLYGMGHLHLSKMRFRHPMPDSIHKKSDINS 211
LLL GAVL + +QP+ESH+ ++ Q++ DYNLYG ++ SK++FR P+P+ N
Sbjct: 106 LLLQGAVLKRPMQPYESHLQYVPQWMCDYNLYGCAYMKCSKVKFRSPIPEYYELS---NL 162
Query: 212 QHRKADPGAEACLESKIWMSSTISFDWMWSLPSESGGSSNDNTHSPKRQSICELEGDISV 271
HR W +I D + +D T PK QS C LE D+ V
Sbjct: 163 SHR--------------WHDRSIQPDCV-----------SDATVLPK-QSHCPLEADVCV 196
Query: 272 DEILNQ--------QFKMFSSLSQTSSNVNMVQSLVSIWEEQRKRSGIHEATMLSDSGKP 323
+ILN+ L + +V S+ +W+++ +R + S
Sbjct: 197 HDILNRVDIKERPLHQDFTEMLKPIAQKERLVPSMAGLWQDETRRRKQRMGLVDPGSSPF 256
Query: 324 LPEDVM 329
PE++M
Sbjct: 257 GPEELM 262
>dbj|BAA11461.1| DNA polymerase [Mus musculus]
Length = 755
Score = 666 bits (1719), Expect = 0.0
Identities = 356/779 (45%), Positives = 494/779 (62%), Gaps = 39/779 (5%)
Query: 1229 DEKHLLKEFTKIVSSSDPDILMGWEIQGSSLGFLAERASHLGFGLLNDLSRTPSNSWINS 1288
DEK L +E T I+ DPDIL+G+EIQ S G+L +RA+ L L +SR P
Sbjct: 6 DEKALFQEITNIIKRYDPDILLGYEIQMHSWGYLLQRAAALSVDLCQMISRVP------- 58
Query: 1289 QDIKTSEKSILEPDIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGE 1348
D K + E D++G S +++ GRI LNLWR++R E
Sbjct: 59 -DDKIENRFAAE-------------------RDDYGSDTMSEINIVGRITLNLWRIMRNE 98
Query: 1349 VKLNLYSVEAVAEAVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQ 1408
V L Y+ E V+ VL ++ P VL+ WF R++ + + V R + NL++L Q
Sbjct: 99 VGLTNYTFENVSFHVLHQRFPLFTFRVLSDWFDNKTDLYRWKMVDHYVSRVRGNLQMLEQ 158
Query: 1409 LDMVNRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAME 1468
LD++ +TSE+AR+FGI F VL+RGSQYRVESM LR+A NY+ ++P QQ + A +
Sbjct: 159 LDLIGKTSEMARLFGIQFLHVLTRGSQYRVESMMLRIAKPMNYIPVTPSIQQRSQMRAPQ 218
Query: 1469 CLPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVV---PSKTNTLGVSPF 1525
C+PL+MEPES FYS+ V+VLDFQSLYPS++IAYN CF TCLG V G +
Sbjct: 219 CVPLIMEPESRFYSNSVLVLDFQSLYPSIVIAYNYCFSTCLGHVENLGKYDEFKFGCTSL 278
Query: 1526 VPEQHILQDLKDQILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQV 1585
+L ++ + ++PNGV FV +R+GVLPR+LEEIL TR+MVKQ+MK ++
Sbjct: 279 RVPPDLLYQIRHDVTVSPNGVAFVKPSVRKGVLPRMLEEILKTRLMVKQSMKSYK-QDRA 337
Query: 1586 LQRIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEK 1645
L R+ NARQL LKLI+NVT+GYTAA FSGRMPC E+ DSIV R TLE+AI VN +K
Sbjct: 338 LSRMLNARQLGLKLIANVTFGYTAANFSGRMPCIEVGDSIVHKARETLERAIKLVNDTKK 397
Query: 1646 WNAKVIYGDTDSMFVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITK 1705
W A+V+YGDTDSMFVLLKG T +++F+IG EIA A+TA NP PV LK EKVY PC L TK
Sbjct: 398 WGARVVYGDTDSMFVLLKGATKEQSFKIGQEIAEAVTATNPRPVKLKFEKVYLPCVLQTK 457
Query: 1706 KRYVGYSYENPNQIEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQR 1765
KRYVGY YE +Q EPVFDAKGIETVRRD+C AV+KI+E+SL+L FE + + +K Y+ R
Sbjct: 458 KRYVGYMYETLDQKEPVFDAKGIETVRRDSCPAVSKILERSLKLLFETRDISLIKQYVHR 517
Query: 1766 QWKRILSGRVSLKDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPY 1825
Q +++ G+ S++DFIFAKE R G++S R + PA + K + DRR+EPR ER+PY
Sbjct: 518 QCMKLVEGKASIQDFIFAKEYR-GSFSYRPGACVPALELTRKMLAYDRRSEPRVGERVPY 576
Query: 1826 VVIHGEPGARLVDMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFA 1885
V+I+G PG L+ ++ P EVL D R+N YYI KQI+P L R+F L+G D+ W+
Sbjct: 577 VIIYGTPGLPLIQLIRRPAEVLQ-DPTLRLNATYYITKQILPPLARIFSLIGIDVFSWYQ 635
Query: 1886 EMPRPVREASVKHAFTPNFQRTRIDYYYLSKHCVLCGGLVQASARLCSQCSENEVAAATA 1945
E+PR +++A+ ++ I Y+ + HC +C L Q +CS+C A
Sbjct: 636 ELPR-IQKATSSSRSELEGRKGTISQYFTTLHCPVCDDLTQHG--ICSKCRSQPQHVAII 692
Query: 1946 VIGKTAKLEQEMQHLVSICQHCGGGDRLLESGVKCTSISCLVFYERRKVQKELLAATHV 2004
+ + +LE++ + L+ IC++C G + + C S++C V ++ +V +EL A ++
Sbjct: 693 LNQEIRELERKQEQLIKICRNCTGS---FDRHIPCVSLNCPVLFKLSRVNRELSKAPYL 748
>gb|EAA60359.1| hypothetical protein AN4789.2 [Aspergillus nidulans FGSC A4]
gi|18031889|gb|AAL09153.1| polymerase zeta subunit
[Aspergillus nidulans] gi|67537238|ref|XP_662393.1|
hypothetical protein AN4789_2 [Aspergillus nidulans FGSC
A4] gi|49094930|ref|XP_408926.1| hypothetical protein
AN4789.2 [Aspergillus nidulans FGSC A4]
Length = 1681
Score = 660 bits (1704), Expect = 0.0
Identities = 375/881 (42%), Positives = 528/881 (59%), Gaps = 49/881 (5%)
Query: 1128 ISQISGPGEKSSFTPLSQIGFQDPASAGHGQQLALLSIEVLAESRGDLLPDPQFDAVNIV 1187
+SQI GP +K+ + + Q ++ +S+EV +RG LLP+P+ D +
Sbjct: 806 LSQIEGPTQKNEHGFKYSQHKKSTSVEHQTQYMSTMSLEVHVNTRGVLLPNPEEDEIAAF 865
Query: 1188 ALGFQKDCDATVE---VLVLLHSKFVPCQRSLDGLSDCKVLNF-----TDEKHLLKEFTK 1239
+ + E + V+ + K L F + E L+
Sbjct: 866 FWCVNSEDEPQEEDDSLSVVNMGVVFQGEEEYPESKISKALRFECEHESTELDLINRLVD 925
Query: 1240 IVSSSDPDILMGWEIQGSSLGFLAERA-SHLGFGLLNDLSRTPSNSWINSQDIKTSEKSI 1298
IV DPDI+ G+E+ SS GF+ ERA F L ++LSR S++
Sbjct: 926 IVRLHDPDIITGYEVHNSSWGFIIERARKKYDFDLCDELSRVKSHAHGRF---------- 975
Query: 1299 LEPDIPDTTSLDCCARESSIIEDEWGRTHASGVHVGGRIVLNLWRLIRGEVKLNLYSVEA 1358
+E+ D+WG H S + + GR ++N+WR +R E+ L Y++E
Sbjct: 976 --------------GKEA----DKWGFDHTSSIRITGRHIINIWRAMRSEMNLLQYTMEN 1017
Query: 1359 VAEAVLRRKVPSLNHNVLTKWFSRGPGQARYQCIKYIVDRAKLNLEILNQLDMVNRTSEL 1418
V +L R++P + LT W+ + + I Y R ++N+EILN +++ RTSE
Sbjct: 1018 VVFHLLHRRIPHYSFRDLTAWYQSDKPRDFMKVINYYTSRVQMNIEILNANELIPRTSEQ 1077
Query: 1419 ARVFGIDFFSVLSRGSQYRVESMFLRLAHTQNYVAISPGNQQVASQPAMECLPLVMEPES 1478
AR+ GIDF+SV SRGSQ++VES+ R+A +N++ +SP +QV Q A+ECLPLVMEP+S
Sbjct: 1078 ARLLGIDFYSVFSRGSQFKVESLMFRIAKPENFILVSPSRKQVGQQNALECLPLVMEPQS 1137
Query: 1479 GFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLGKVVPSK-TNTLGVSPFVPEQHILQDLKD 1537
FY+ P++VLDFQSLYPS++IAYN C+ T LG+V + N +G + +L+ LKD
Sbjct: 1138 DFYTSPLIVLDFQSLYPSIMIAYNYCYSTFLGRVQSWRGRNKMGFLDYNRPPRLLELLKD 1197
Query: 1538 QILLTPNGVMFVPSKIRRGVLPRLLEEILSTRIMVKQAMKKLSPSEQVLQRIFNARQLAL 1597
I + PNG+++ S++R+ +L ++L EIL TR+MVK MK + ++ LQR+ N RQLAL
Sbjct: 1198 HINIAPNGMIYARSEVRKSLLAKMLTEILETRVMVKTGMK-VDKDDRALQRLLNNRQLAL 1256
Query: 1598 KLISNVTYGYTAAGFSGRMPCAELADSIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDS 1657
KLI+NVTYGYT+A FSGRMPC+E+ADSIVQ GR TLEKAI+F++ E+W A+V+YGDTDS
Sbjct: 1257 KLIANVTYGYTSASFSGRMPCSEIADSIVQSGRETLEKAIAFIHSVERWGAEVVYGDTDS 1316
Query: 1658 MFVLLKGRTAKEAFQIGSEIASAITAMNPSPVTLKMEKVYHPCFLITKKRYVGYSYENPN 1717
+FV LKGRT +AF IG EIA A+T MNP PV LK EKVYHPC L+ KKRYVG+ YE+ N
Sbjct: 1317 LFVYLKGRTRDQAFDIGEEIAQAVTNMNPHPVKLKFEKVYHPCVLLAKKRYVGFKYEHRN 1376
Query: 1718 QIEPVFDAKGIETVRRDTCEAVAKIMEQSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSL 1777
Q EP FDAKGIETVRRD A KI E++L+L F L +VK+Y Q Q +I+ GRVS+
Sbjct: 1377 QKEPEFDAKGIETVRRDGTPAEQKIEEKALKLLFRTADLSQVKSYFQSQCTKIMQGRVSV 1436
Query: 1778 KDFIFAKEVRLGTYSARISSLPPAAIVATKAMRVDRRAEPRYAERIPYVVIHGEPGARLV 1837
+DF FA+ V+LGTYS +LP A+++TK M D RAEP+Y ER+PYVV+ G PG+RL+
Sbjct: 1437 QDFCFARAVKLGTYSEN-GTLPAGALISTKKMLEDPRAEPQYGERVPYVVVTGAPGSRLI 1495
Query: 1838 DMVVDPLEVLAIDSPFRINDLYYINKQIIPALQRVFGLVGADLNQWFAEMPRPVR----E 1893
D V P E L D+ ++ YYI K IIP L+R+F LVGA++ QW+ EMP+ R E
Sbjct: 1496 DRCVPP-ETLLQDAQLDLDAEYYITKNIIPPLERIFNLVGANVRQWYDEMPKVHRIRRVE 1554
Query: 1894 ASVKHAFTPNFQRTRIDYYYLSKHCVLC-GGLVQASARLCSQCSENEVAAATAVIGKTAK 1952
+ A + RT ++ Y + CV+C L A +CS C + ++ +
Sbjct: 1555 GTSSLAGGKSSIRT-LESYMKASSCVVCKAKLYDAEIPVCSDCVRQPHVSLLELVSRQRH 1613
Query: 1953 LEQEMQHLVSICQHCGGGDRLLESGVKCTSISCLVFYERRK 1993
EQ + L IC+ C D VKC S+ C VFY R +
Sbjct: 1614 AEQRVATLERICRSC--MDVPFGDEVKCDSLDCPVFYARTR 1652
Score = 152 bits (383), Expect = 1e-34
Identities = 105/314 (33%), Positives = 159/314 (50%), Gaps = 50/314 (15%)
Query: 11 FSVRIVSVDHYMASPI---PSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHIHGAL 67
F VR+ VDHY A+P P + +G + +VPVIR++G+T GQK C+H+HGA
Sbjct: 4 FQVRLNCVDHYQANPSEFDPPLPYRDGNNEKGYMPKVPVIRIFGTTETGQKICVHVHGAF 63
Query: 68 PYLYVSCSDIPLQLDQEGDAYTYMVASSLEKALKL---KGSADSSRQHVHGCSLVRAKKF 124
PYLYV D L D A + S++ AL + + + D V +LV+ F
Sbjct: 64 PYLYVQY-DGDLSPDSVRSA-ARSLHLSIDHALAVSYRRNAHDKKTVFVAHITLVKGVPF 121
Query: 125 YGYCSFEEFFVKIYLRYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQFLVDYNLYG 184
YGY FF KIYL P ++R A+LLL GAV+ + +QP+ESH+ ++ Q++ DYNL+G
Sbjct: 122 YGYHVGYRFFFKIYL-LNPIYITRLADLLLQGAVMKRPIQPYESHLQYVPQWMCDYNLFG 180
Query: 185 MGHLHLSKMRFRHPMPDSIHKKSDINSQHRKADPGAEACLESKIWMSSTISFDWMWSLPS 244
+ K +FR P+P+ + + HR W +I W+
Sbjct: 181 CAFMKCGKAKFRSPIPEYLDLP---DLSHR--------------WHDRSIPPGWIL---- 219
Query: 245 ESGGSSNDNTHSPKRQSICELEGDISVDEILNQ----------QFKMFSSLSQTSSNVNM 294
D + PK QS C LE D+ V +ILN+ F+ F L+ +SN +
Sbjct: 220 -------DESVLPK-QSHCPLEADVCVQDILNRLEISERSIHHDFREF--LNPLTSNEKL 269
Query: 295 VQSLVSIWEEQRKR 308
V S+ +WE++++R
Sbjct: 270 VPSMAGLWEDEKRR 283
>gb|EAL24900.1| GA15135-PA [Drosophila pseudoobscura]
Length = 2094
Score = 616 bits (1588), Expect = e-174
Identities = 361/862 (41%), Positives = 516/862 (58%), Gaps = 64/862 (7%)
Query: 1160 LALLSIEVLAESRGDLLPDPQFDAVNIVALGFQK---DCDATVEV-------LVLLHSKF 1209
L ++++EV +RG+L PDP D + + + D DA + +++ H++
Sbjct: 1260 LTIMTLEVFVATRGELQPDPMHDEMRCLFYAIEHSLPDADADGSLPSKACGYIMVNHAQD 1319
Query: 1210 VPCQRSLDGLS-DCKVLNFTDEKHLLKEFTKIVSSSDPDILMGWEIQGSSLGFLAERASH 1268
+ + + GL D +V ++E ++ + + D DI G+EI+ +S G++ +RA H
Sbjct: 1320 LLSEGLIHGLDKDIEVQVVSNEAEAMEALLALCARWDADIYAGYEIEMASWGYVIDRAKH 1379
Query: 1269 LGFGLLNDLSRTPSNSWINSQDIKTSEKSILEPDIPDTTSLDCCARESSIIEDEWGRTHA 1328
L F + LSR P+ + ++ D T LD
Sbjct: 1380 LCFNIAPLLSRVPTQK----------VRDFVDEDREQFTDLDV----------------- 1412
Query: 1329 SGVHVGGRIVLNLWRLIRGEVKLNLYSVEAVAEAVLRRKVPSLNHNVLTKWFSRGPGQAR 1388
+ + GRI+L++WRL+R E+ L Y+ E V +L ++ P N LT+WF+ +R
Sbjct: 1413 -EMKLCGRILLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHNPKTLTEWFASPC--SR 1469
Query: 1389 YQCIKYIVDRAKLNLEILNQLDMVNRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHT 1448
+ ++Y ++R + L +L+QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM LR+A
Sbjct: 1470 WIVLEYYLERVRGTLALLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKP 1529
Query: 1449 QNYVAISPGNQQVASQPAMECLPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTC 1508
+N V +SP QQ A A E L L++EP+S FY+DP++VLDFQSLYPSMIIAYN CF TC
Sbjct: 1530 KNVVPLSPSVQQRAHMRAPEYLALILEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTC 1589
Query: 1509 LGKVVP---SKTNTLGVSPFVPEQHILQDLKDQILLT--PNGVMFVPSKIRRGVLPRLLE 1563
LG+V S G S + +LQ L + L+T P GV+FV ++R G+LPR+L
Sbjct: 1590 LGRVEHLGGSSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLT 1649
Query: 1564 EILSTRIMVKQAMKKLSPSEQVLQRIFNARQLALKLISNVTYGYTAAGFSGRMPCAELAD 1623
EIL TR+MVKQ+MK L LQRI ++RQL LKL++NVTYGYTAA FSGRMP E+ D
Sbjct: 1650 EILDTRLMVKQSMK-LHKENSALQRILHSRQLGLKLMANVTYGYTAANFSGRMPAVEVGD 1708
Query: 1624 SIVQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSMFVLLKGRTAKEAFQIGSEIASAITA 1683
S+V GR TLE+AI V +E+W +V+YGDTDSMFVL+ GR EAF+IG EIA A+T
Sbjct: 1709 SVVSKGRETLERAIKMVEANEEWKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAQAVTE 1768
Query: 1684 MNPSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQIEPVFDAKGIETVRRDTCEAVAKIM 1743
M+P PV LK+EKVY PC L TKKRYVGY YE +Q +PV++AKGIETVRRD C AVAK++
Sbjct: 1769 MSPQPVKLKLEKVYQPCLLQTKKRYVGYMYETADQAQPVYEAKGIETVRRDGCPAVAKML 1828
Query: 1744 EQSLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLKDFIFAKEVRLGTYSARISSLPPAAI 1803
E+ LRL FE + +VK Y+ RQ+ ++LSGR +L+D IFAKE R G + ++ PA
Sbjct: 1829 EKVLRLLFETADVSQVKQYVCRQFTKLLSGRANLQDLIFAKEFR-GLNGYKPTACVPALQ 1887
Query: 1804 VATKAMRVDRRAEPRYAERIPYVVIHGEPGARLVDMVVDPLEVLAIDSPFRINDLYYINK 1863
+ K M+ D R PR ER+P+++I+G PG +L+ +V P ++LA + +IN +YYI K
Sbjct: 1888 LTRKWMQKDPRRIPRRGERVPFIIINGPPGMQLIRLVRSPHDILA-NEGHKINAIYYITK 1946
Query: 1864 QIIPALQRVFGLVGADLNQWFAEMPRPV----REASVKHAFTPNFQRTRIDYYYLSKHCV 1919
IIP L R LVGAD+N WF +PR + A + ++ I Y+ + CV
Sbjct: 1947 AIIPPLNRCLLLVGADVNDWFTSLPRKLLMMPALAMANELASGRGAKSTISQYFSTTSCV 2006
Query: 1920 L-CGGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQHLVSICQHCGGGDRLLESGV 1978
+ CG Q A +C +C + + K A+LE+ Q ICQ C G +
Sbjct: 2007 IDCGR--QTKAGICPECLRDATKCVITLSDKVARLERGHQLTQQICQSCCG----RVGSL 2060
Query: 1979 KCTSISCLVFY----ERRKVQK 1996
+C S+ C V Y +RR VQ+
Sbjct: 2061 QCDSLDCPVRYVLEVKRRDVQQ 2082
Score = 167 bits (422), Expect = 4e-39
Identities = 95/278 (34%), Positives = 149/278 (53%), Gaps = 15/278 (5%)
Query: 10 VFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHIHGALPY 69
V+S+R+V D YM P +D +S ++ VP+IRV+G+ AGQKTC+H+HG PY
Sbjct: 9 VYSIRLVIADFYMEKPQSGLDPCYSELRGKEIKRVPIIRVFGANSAGQKTCMHVHGVFPY 68
Query: 70 LYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLK-GSADSSRQHVHGCSLVRAKKFYGYC 128
Y+ + + G +A L+KAL + G S+ QHV LV+ FYGY
Sbjct: 69 FYIPYDKKDFESLERG---ILQIAMHLDKALNISLGQGSSNAQHVFKIQLVKGIPFYGYH 125
Query: 129 SFEEFFVKIYLRYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQFLVDYNLYGMGHL 188
+ F+KIY+ + P+ V RAANLL +GA+L+K+ PHESH+P+ILQF++DYNLYGM +L
Sbjct: 126 RVDHQFLKIYM-FNPRFVRRAANLLQSGAILSKNFNPHESHVPYILQFMIDYNLYGMSYL 184
Query: 189 H--LSKMRFRHPMPDSIHKKSDINSQHRKADPGAE--ACLESKIWMSSTISFDWMWSLPS 244
H L ++FR D + ++ + + AC ++ +SS + +
Sbjct: 185 HVPLEVVKFRRSHEDEVVPYPNVKPEQLLETSSVKKMACSSLEVDVSSNFILNRFQLVAK 244
Query: 245 ESGGSSND------NTHSPKRQSICELEGDISVDEILN 276
G +N N + +RQ + + + ++ LN
Sbjct: 245 GKGSHTNPGIEAIWNDENVRRQKLAQSYAAAADEQKLN 282
>gb|AAF59191.2| CG1925-PA [Drosophila melanogaster] gi|24586371|ref|NP_524881.2|
CG1925-PA [Drosophila melanogaster]
gi|11096179|gb|AAG30224.1| DNA polymerase zeta catalytic
subunit [Drosophila melanogaster]
Length = 2130
Score = 612 bits (1578), Expect = e-173
Identities = 362/863 (41%), Positives = 504/863 (57%), Gaps = 60/863 (6%)
Query: 1160 LALLSIEVLAESRGDLLPDPQFDAVNIVALGFQKDCDATVEVLVLLHSKFVPCQRSLDGL 1219
L ++++EV +RGDL PDP D + + + E L ++ D L
Sbjct: 1300 LTIITLEVFVSTRGDLQPDPMHDEIRCLFYAIEHSLPD--EKLPSKACGYIMVNTVQDLL 1357
Query: 1220 S---------DCKVLNFTDEKHLLKEFTKIVSSSDPDILMGWEIQGSSLGFLAERASHLG 1270
S D +V T E + + D DI G+EI+ SS G++ +RA HL
Sbjct: 1358 SEGPFHGIDRDIEVQVVTSEAEAFEALLALCERWDADIYAGYEIEMSSWGYVIDRAKHLC 1417
Query: 1271 FGLLNDLSRTPSNSWINSQDIKTSEKSILEPDIPDTTSLDCCARESSIIEDEWGRTHASG 1330
F + LSR P+ + ++ D T LD
Sbjct: 1418 FNIAPLLSRVPTQK----------VRDFVDEDREQFTDLDV------------------E 1449
Query: 1331 VHVGGRIVLNLWRLIRGEVKLNLYSVEAVAEAVLRRKVPSLNHNVLTKWFSRGPGQARYQ 1390
+ + GRI+L++WRL+R E+ L Y+ E V +L ++ P LT+WF G R+
Sbjct: 1450 MKLCGRILLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHTAKSLTEWF--GSPCTRWI 1507
Query: 1391 CIKYIVDRAKLNLEILNQLDMVNRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQN 1450
++Y ++R + L +L+QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM LR+A +N
Sbjct: 1508 VMEYYLERVRGTLTLLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKN 1567
Query: 1451 YVAISPGNQQVASQPAMECLPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLG 1510
V +SP Q A A E L L+MEP+S FY+DP++VLDFQSLYPSMIIAYN CF TCLG
Sbjct: 1568 LVPLSPSVQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLG 1627
Query: 1511 KVVP---SKTNTLGVSPFVPEQHILQDLKDQILLT--PNGVMFVPSKIRRGVLPRLLEEI 1565
+V S G S + +LQ L + L+T P GV+FV ++R G+LPR+L EI
Sbjct: 1628 RVEHLGGSSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEI 1687
Query: 1566 LSTRIMVKQAMKKLSPSEQVLQRIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSI 1625
L TR MVKQ+MK L LQRI ++RQL LKL++NVTYGYTAA FSGRMP E+ DS+
Sbjct: 1688 LDTRQMVKQSMK-LHKDSSALQRILHSRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSV 1746
Query: 1626 VQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSMFVLLKGRTAKEAFQIGSEIASAITAMN 1685
V GR TLE+AI V +E+W +V+YGDTDSMFVL+ GR EAF+IG EIA A+T MN
Sbjct: 1747 VSKGRETLERAIKLVENNEEWKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAKAVTEMN 1806
Query: 1686 PSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQIEPVFDAKGIETVRRDTCEAVAKIMEQ 1745
P PV LK+EKVY PC L TKKRYVGY YE +Q +PV++AKGIETVRRD C AVAK++E+
Sbjct: 1807 PQPVKLKLEKVYQPCMLQTKKRYVGYMYETADQEQPVYEAKGIETVRRDGCPAVAKMLEK 1866
Query: 1746 SLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLKDFIFAKEVRLGTYSARISSLPPAAIVA 1805
LR+ FE Q + ++K Y+ RQ+ ++LSGR +L+D IFAKE R G + ++ PA +
Sbjct: 1867 VLRILFETQDVSKIKAYVCRQFTKLLSGRANLQDLIFAKEFR-GLNGYKPTACVPALELT 1925
Query: 1806 TKAMRVDRRAEPRYAERIPYVVIHGEPGARLVDMVVDPLEVLAIDSPFRINDLYYINKQI 1865
K M+ D R PR ER+P+++++G PG +L+ +V P ++LA + +IN +YYI K I
Sbjct: 1926 RKWMQKDPRHVPRRGERVPFIIVNGPPGMQLIRLVRSPHDILA-NEGHKINAIYYITKAI 1984
Query: 1866 IPALQRVFGLVGADLNQWFAEMPRPV----REASVKHAFTPNFQRTRIDYYYLSKHCVL- 1920
IP L R L+GA+++ WFA +PR + + ++ I Y+ + CV+
Sbjct: 1985 IPPLNRCLLLIGANVHDWFASLPRKLLMTPAVGTANELAGARGAKSTISQYFSTTSCVID 2044
Query: 1921 CGGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQHLVSICQHCGGGDRLLESGVKC 1980
CG Q A +C C +N + KTA+LE+ Q ICQ C G RL ++C
Sbjct: 2045 CGR--QTKAGICPDCLKNATTCVVVLSDKTARLERGYQLTRQICQACCG--RL--GSLQC 2098
Query: 1981 TSISCLVFYERRKVQKELLAATH 2003
S+ C V Y ++EL H
Sbjct: 2099 DSLDCPVLYVLEGKRRELQQIEH 2121
Score = 163 bits (413), Expect = 5e-38
Identities = 86/202 (42%), Positives = 122/202 (59%), Gaps = 7/202 (3%)
Query: 5 ESNSDVFSVRIVSVDHYMASPIPSIDISHSTFHRGKVNEVPVIRVYGSTPAGQKTCLHIH 64
E+ V+SVR+V D YM P +D +S ++ VPVIRV+G GQKTC+H+H
Sbjct: 6 EAIDGVYSVRLVIADFYMEKPQFGMDPCYSELRGKEIKRVPVIRVFGGNSRGQKTCMHVH 65
Query: 65 GALPYLYVSCSDIPLQLDQEGDAYTYMVASSLEKALKLK-GSADSSRQHVHGCSLVRAKK 123
G PYLY+ + + G +A L+KA+ + G S+ QHV LV+
Sbjct: 66 GVFPYLYIPYDKKDFESLERG---ILQMAMHLDKAINISLGQGSSNAQHVFKIQLVKGIP 122
Query: 124 FYGYCSFEEFFVKIYLRYYPQDVSRAANLLLAGAVLNKSLQPHESHIPFILQFLVDYNLY 183
FYGY E F+KIY+ + P+ V RAANLL +GA+L+K+ PHESH+P+ILQF++DYNLY
Sbjct: 123 FYGYHRVEHQFLKIYM-FNPRFVRRAANLLQSGAILSKNFSPHESHVPYILQFMIDYNLY 181
Query: 184 GMGHLH--LSKMRFRHPMPDSI 203
GM ++H L ++FR D +
Sbjct: 182 GMSYVHVPLEVLKFRRNHDDDV 203
>gb|AAL13918.1| LD40801p [Drosophila melanogaster]
Length = 1325
Score = 612 bits (1578), Expect = e-173
Identities = 362/863 (41%), Positives = 504/863 (57%), Gaps = 60/863 (6%)
Query: 1160 LALLSIEVLAESRGDLLPDPQFDAVNIVALGFQKDCDATVEVLVLLHSKFVPCQRSLDGL 1219
L ++++EV +RGDL PDP D + + + E L ++ D L
Sbjct: 495 LTIITLEVFVSTRGDLQPDPMHDEIRCLFYAIEHSLPD--EKLPSKACGYIMVNTVQDLL 552
Query: 1220 S---------DCKVLNFTDEKHLLKEFTKIVSSSDPDILMGWEIQGSSLGFLAERASHLG 1270
S D +V T E + + D DI G+EI+ SS G++ +RA HL
Sbjct: 553 SEGPFHGIDRDIEVQVVTSEAEAFEALLALCERWDADIYAGYEIEMSSWGYVIDRAKHLC 612
Query: 1271 FGLLNDLSRTPSNSWINSQDIKTSEKSILEPDIPDTTSLDCCARESSIIEDEWGRTHASG 1330
F + LSR P+ + ++ D T LD
Sbjct: 613 FNIAPLLSRVPTQK----------VRDFVDEDREQFTDLDV------------------E 644
Query: 1331 VHVGGRIVLNLWRLIRGEVKLNLYSVEAVAEAVLRRKVPSLNHNVLTKWFSRGPGQARYQ 1390
+ + GRI+L++WRL+R E+ L Y+ E V +L ++ P LT+WF G R+
Sbjct: 645 MKLCGRILLDVWRLMRSEIALTSYTFENVMYHILHKRCPWHTAKSLTEWF--GSPCTRWI 702
Query: 1391 CIKYIVDRAKLNLEILNQLDMVNRTSELARVFGIDFFSVLSRGSQYRVESMFLRLAHTQN 1450
++Y ++R + L +L+QLD++ RTSE+A++ GI F+ VLSRGSQ+RVESM LR+A +N
Sbjct: 703 VMEYYLERVRGTLTLLDQLDLLGRTSEMAKLIGIQFYEVLSRGSQFRVESMMLRIAKPKN 762
Query: 1451 YVAISPGNQQVASQPAMECLPLVMEPESGFYSDPVVVLDFQSLYPSMIIAYNLCFCTCLG 1510
V +SP Q A A E L L+MEP+S FY+DP++VLDFQSLYPSMIIAYN CF TCLG
Sbjct: 763 LVPLSPSVQARAHMRAPEYLALIMEPQSRFYADPLIVLDFQSLYPSMIIAYNYCFSTCLG 822
Query: 1511 KVVP---SKTNTLGVSPFVPEQHILQDLKDQILLT--PNGVMFVPSKIRRGVLPRLLEEI 1565
+V S G S + +LQ L + L+T P GV+FV ++R G+LPR+L EI
Sbjct: 823 RVEHLGGSSPFEFGASQLRVSRQMLQKLLEHDLVTVSPCGVVFVKREVREGILPRMLTEI 882
Query: 1566 LSTRIMVKQAMKKLSPSEQVLQRIFNARQLALKLISNVTYGYTAAGFSGRMPCAELADSI 1625
L TR MVKQ+MK L LQRI ++RQL LKL++NVTYGYTAA FSGRMP E+ DS+
Sbjct: 883 LDTRQMVKQSMK-LHKDSSALQRILHSRQLGLKLMANVTYGYTAANFSGRMPSVEVGDSV 941
Query: 1626 VQCGRCTLEKAISFVNLHEKWNAKVIYGDTDSMFVLLKGRTAKEAFQIGSEIASAITAMN 1685
V GR TLE+AI V +E+W +V+YGDTDSMFVL+ GR EAF+IG EIA A+T MN
Sbjct: 942 VSKGRETLERAIKLVENNEEWKVRVVYGDTDSMFVLVPGRNRAEAFRIGEEIAKAVTEMN 1001
Query: 1686 PSPVTLKMEKVYHPCFLITKKRYVGYSYENPNQIEPVFDAKGIETVRRDTCEAVAKIMEQ 1745
P PV LK+EKVY PC L TKKRYVGY YE +Q +PV++AKGIETVRRD C AVAK++E+
Sbjct: 1002 PQPVKLKLEKVYQPCMLQTKKRYVGYMYETADQEQPVYEAKGIETVRRDGCPAVAKMLEK 1061
Query: 1746 SLRLFFEHQSLLEVKTYLQRQWKRILSGRVSLKDFIFAKEVRLGTYSARISSLPPAAIVA 1805
LR+ FE Q + ++K Y+ RQ+ ++LSGR +L+D IFAKE R G + ++ PA +
Sbjct: 1062 VLRILFETQDVSKIKAYVCRQFTKLLSGRANLQDLIFAKEFR-GLNGYKPTACVPALELT 1120
Query: 1806 TKAMRVDRRAEPRYAERIPYVVIHGEPGARLVDMVVDPLEVLAIDSPFRINDLYYINKQI 1865
K M+ D R PR ER+P+++++G PG +L+ +V P ++LA + +IN +YYI K I
Sbjct: 1121 RKWMQKDPRHVPRRGERVPFIIVNGPPGMQLIRLVRSPHDILA-NEGHKINAIYYITKAI 1179
Query: 1866 IPALQRVFGLVGADLNQWFAEMPRPV----REASVKHAFTPNFQRTRIDYYYLSKHCVL- 1920
IP L R L+GA+++ WFA +PR + + ++ I Y+ + CV+
Sbjct: 1180 IPPLNRCLLLIGANVHDWFASLPRKLLMTPAVGTANELAGARGAKSTISQYFSTTSCVID 1239
Query: 1921 CGGLVQASARLCSQCSENEVAAATAVIGKTAKLEQEMQHLVSICQHCGGGDRLLESGVKC 1980
CG Q A +C C +N + KTA+LE+ Q ICQ C G RL ++C
Sbjct: 1240 CGR--QTKAGICPDCLKNATTCVVVLSDKTARLERGYQLTRQICQACCG--RL--GSLQC 1293
Query: 1981 TSISCLVFYERRKVQKELLAATH 2003
S+ C V Y ++EL H
Sbjct: 1294 DSLDCPVLYVLEGKRRELQQIEH 1316
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.318 0.133 0.393
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,380,520,935
Number of Sequences: 2540612
Number of extensions: 143983713
Number of successful extensions: 361119
Number of sequences better than 10.0: 1077
Number of HSP's better than 10.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 514
Number of HSP's that attempted gapping in prelim test: 356025
Number of HSP's gapped (non-prelim): 2691
length of query: 2018
length of database: 863,360,394
effective HSP length: 143
effective length of query: 1875
effective length of database: 500,052,878
effective search space: 937599146250
effective search space used: 937599146250
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 83 (36.6 bits)
Medicago: description of AC146571.7