BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145221.10 - phase: 0
(68 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Ar... 99 3e-20
ref|NP_174828.1| AT hook motif-containing protein-related [Arabi... 99 3e-20
gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|2019761... 98 6e-20
ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana] 97 1e-19
emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228... 96 2e-19
dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana] 94 9e-19
ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana] 94 9e-19
dbj|BAB10788.1| replication protein A1-like [Arabidopsis thalian... 92 4e-18
ref|NP_198346.1| hypothetical protein [Arabidopsis thaliana] 92 4e-18
dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana] 89 4e-17
ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana] 89 4e-17
gb|AAD32757.1| putative helicase [Arabidopsis thaliana] gi|25353... 88 5e-17
emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa (japonica cultivar... 87 1e-16
gb|AAF06079.1| F28J9.3 [Arabidopsis thaliana] gi|25403499|pir||F... 86 3e-16
ref|XP_481695.1| helicase-like protein [Oryza sativa (japonica c... 82 3e-15
ref|XP_479365.1| helicase-like protein [Oryza sativa (japonica c... 82 3e-15
gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa... 82 3e-15
ref|NP_680269.1| hypothetical protein [Arabidopsis thaliana] 82 4e-15
ref|NP_912900.1| unnamed protein product [Oryza sativa (japonica... 81 8e-15
ref|NP_913627.1| putative helicase [Oryza sativa (japonica culti... 80 1e-14
>gb|AAG52315.1| hypothetical protein, 5' partial; 93859-91015 [Arabidopsis
thaliana]
Length = 729
Score = 99.0 bits (245), Expect = 3e-20
Identities = 45/68 (66%), Positives = 61/68 (89%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL+H G+YLP PVFSHGQL+V +S+VTS++ LKILI+D+DG+ +T+N+V
Sbjct: 661 MTINKSQGQSLEHIGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGKLQKQTTNVV 720
Query: 61 YEEVFQNV 68
++EVFQN+
Sbjct: 721 FKEVFQNI 728
>ref|NP_174828.1| AT hook motif-containing protein-related [Arabidopsis thaliana]
gi|25511694|pir||D86481 189.6K hypothetical protein
F10O5.11 - Arabidopsis thaliana
gi|12322087|gb|AAG51081.1| hypothetical protein
[Arabidopsis thaliana]
Length = 1678
Score = 99.0 bits (245), Expect = 3e-20
Identities = 45/68 (66%), Positives = 61/68 (89%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL+H G+YLP PVFSHGQL+V +S+VTS++ LKILI+D+DG+ +T+N+V
Sbjct: 1610 MTINKSQGQSLEHIGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGKLQKQTTNVV 1669
Query: 61 YEEVFQNV 68
++EVFQN+
Sbjct: 1670 FKEVFQNI 1677
>gb|AAM15435.1| unknown protein [Arabidopsis thaliana] gi|20197614|gb|AAM15154.1|
unknown protein [Arabidopsis thaliana]
Length = 1308
Score = 97.8 bits (242), Expect = 6e-20
Identities = 47/68 (69%), Positives = 56/68 (82%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL H G+YLP PVFSHGQL+V VS+V SR LKILIIDE+G T+N+V
Sbjct: 1234 MTINKSQGQSLSHVGIYLPRPVFSHGQLYVAVSRVKSRRGLKILIIDEEGNRGKTTTNVV 1293
Query: 61 YEEVFQNV 68
++EVFQN+
Sbjct: 1294 FKEVFQNL 1301
>ref|NP_189741.1| hypothetical protein [Arabidopsis thaliana]
Length = 1099
Score = 96.7 bits (239), Expect = 1e-19
Identities = 42/68 (61%), Positives = 58/68 (84%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSLK G+YLP PVFSHGQL+V +S+VTS++ LK+LI+D++G +T N+V
Sbjct: 1030 MTINKSQGQSLKEVGIYLPKPVFSHGQLYVALSRVTSKKGLKVLIVDKEGNTQSQTMNVV 1089
Query: 61 YEEVFQNV 68
++E+FQN+
Sbjct: 1090 FKEIFQNI 1097
>emb|CAB91581.1| putative protein [Arabidopsis thaliana] gi|15228453|ref|NP_189796.1|
AT hook motif-containing protein-related [Arabidopsis
thaliana] gi|11357786|pir||T48965 hypothetical protein
F4M19.60 - Arabidopsis thaliana
Length = 1752
Score = 95.9 bits (237), Expect = 2e-19
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL+ G+YLP PVFSHGQL+V +S+VTS++ LKILI+D+DG +T+N+V
Sbjct: 1684 MTINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGNMQKQTTNVV 1743
Query: 61 YEEVFQNV 68
++EVFQN+
Sbjct: 1744 FKEVFQNI 1751
>dbj|BAB02793.1| helicase-like protein [Arabidopsis thaliana]
Length = 1428
Score = 94.0 bits (232), Expect = 9e-19
Identities = 43/68 (63%), Positives = 59/68 (86%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL+ G+YLP PVFSHGQL+V +S+VTS+ LKILI+D++G+ +T+N+V
Sbjct: 1361 MTINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKTGLKILILDKEGKIQKQTTNVV 1420
Query: 61 YEEVFQNV 68
++EVFQN+
Sbjct: 1421 FKEVFQNI 1428
>ref|NP_187933.1| hypothetical protein [Arabidopsis thaliana]
Length = 1419
Score = 94.0 bits (232), Expect = 9e-19
Identities = 43/68 (63%), Positives = 59/68 (86%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL+ G+YLP PVFSHGQL+V +S+VTS+ LKILI+D++G+ +T+N+V
Sbjct: 1352 MTINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKTGLKILILDKEGKIQKQTTNVV 1411
Query: 61 YEEVFQNV 68
++EVFQN+
Sbjct: 1412 FKEVFQNI 1419
>dbj|BAB10788.1| replication protein A1-like [Arabidopsis thaliana]
gi|3695387|gb|AAC62789.1| contains similarity to
replication protein A1 [Arabidopsis thaliana]
gi|7487549|pir||T01955 hypothetical protein T2L5.8 -
Arabidopsis thaliana
Length = 1073
Score = 92.0 bits (227), Expect = 4e-18
Identities = 42/68 (61%), Positives = 58/68 (84%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTIN SQGQSL+H G+YLP VFSHGQL+V +S+VTS++ LK LI+D+DG+ +T+N+V
Sbjct: 1005 MTINTSQGQSLEHVGLYLPKAVFSHGQLYVALSRVTSKKGLKFLILDKDGKLQKQTTNVV 1064
Query: 61 YEEVFQNV 68
++EVFQN+
Sbjct: 1065 FKEVFQNI 1072
>ref|NP_198346.1| hypothetical protein [Arabidopsis thaliana]
Length = 1033
Score = 92.0 bits (227), Expect = 4e-18
Identities = 42/68 (61%), Positives = 58/68 (84%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTIN SQGQSL+H G+YLP VFSHGQL+V +S+VTS++ LK LI+D+DG+ +T+N+V
Sbjct: 965 MTINTSQGQSLEHVGLYLPKAVFSHGQLYVALSRVTSKKGLKFLILDKDGKLQKQTTNVV 1024
Query: 61 YEEVFQNV 68
++EVFQN+
Sbjct: 1025 FKEVFQNI 1032
>dbj|BAB01023.1| helicase-like protein [Arabidopsis thaliana]
Length = 1669
Score = 88.6 bits (218), Expect = 4e-17
Identities = 40/68 (58%), Positives = 56/68 (81%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL + G+YLP PVFSHGQL+V +S+V S+ LK+LI D G+ +ET+N+V
Sbjct: 1602 MTINKSQGQSLGNVGIYLPKPVFSHGQLYVAMSRVKSKGGLKVLITDSKGKQKNETTNVV 1661
Query: 61 YEEVFQNV 68
++E+F+N+
Sbjct: 1662 FKEIFRNL 1669
>ref|NP_189677.1| hypothetical protein [Arabidopsis thaliana]
Length = 1473
Score = 88.6 bits (218), Expect = 4e-17
Identities = 40/68 (58%), Positives = 56/68 (81%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL + G+YLP PVFSHGQL+V +S+V S+ LK+LI D G+ +ET+N+V
Sbjct: 1406 MTINKSQGQSLGNVGIYLPKPVFSHGQLYVAMSRVKSKGGLKVLITDSKGKQKNETTNVV 1465
Query: 61 YEEVFQNV 68
++E+F+N+
Sbjct: 1466 FKEIFRNL 1473
>gb|AAD32757.1| putative helicase [Arabidopsis thaliana] gi|25353663|pir||H84486
probable helicase [imported] - Arabidopsis thaliana
Length = 1241
Score = 88.2 bits (217), Expect = 5e-17
Identities = 39/68 (57%), Positives = 55/68 (80%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
M I KSQGQSLK +YLP PVFSHGQL+V +S+VTS++ LK+LI+D++G +T N+V
Sbjct: 1172 MRIKKSQGQSLKEVEIYLPRPVFSHGQLYVALSRVTSKKGLKVLIVDKEGNTQSQTMNVV 1231
Query: 61 YEEVFQNV 68
++E+FQN+
Sbjct: 1232 FKEIFQNL 1239
>emb|CAD40309.2| OSJNBb0013O03.4 [Oryza sativa (japonica cultivar-group)]
Length = 2052
Score = 86.7 bits (213), Expect = 1e-16
Identities = 41/68 (60%), Positives = 53/68 (77%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQ+L H GVYL PVF+HGQL+VV+S+ TSR LKILI D++ ETSN+V
Sbjct: 1351 MTINKSQGQTLSHVGVYLKKPVFTHGQLYVVISRATSRSGLKILIEDDNESCASETSNVV 1410
Query: 61 YEEVFQNV 68
Y E+ +++
Sbjct: 1411 YHEILRSL 1418
>gb|AAF06079.1| F28J9.3 [Arabidopsis thaliana] gi|25403499|pir||F86486 protein
F28J9.3 [imported] - Arabidopsis thaliana
Length = 436
Score = 85.9 bits (211), Expect = 3e-16
Identities = 40/68 (58%), Positives = 58/68 (84%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL+ G+YL PVFSHGQL+V +S+VT+++ LKILI+D+ G+ +T+N+V
Sbjct: 368 MTINKSQGQSLQQVGLYLHKPVFSHGQLYVALSRVTAKKGLKILILDKYGKLHKQTTNVV 427
Query: 61 YEEVFQNV 68
+++VFQN+
Sbjct: 428 FKKVFQNI 435
>ref|XP_481695.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|38424032|dbj|BAD01692.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
gi|38637630|dbj|BAD03910.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1430
Score = 82.4 bits (202), Expect = 3e-15
Identities = 41/64 (64%), Positives = 50/64 (78%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQ+L+ GVYL PVF+HGQL+V +S+VTSR LKILI ++DG +T NIV
Sbjct: 1324 MTINKSQGQTLQRVGVYLRKPVFTHGQLYVAISRVTSRSGLKILIENDDGSCGTQTKNIV 1383
Query: 61 YEEV 64
Y EV
Sbjct: 1384 YSEV 1387
>ref|XP_479365.1| helicase-like protein [Oryza sativa (japonica cultivar-group)]
gi|50509840|dbj|BAD32013.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
gi|34394334|dbj|BAC84865.1| helicase-like protein [Oryza
sativa (japonica cultivar-group)]
Length = 1516
Score = 82.4 bits (202), Expect = 3e-15
Identities = 41/64 (64%), Positives = 50/64 (78%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQ+L+ GVYL PVF+HGQL+V +S+VTSR LKILI ++DG +T NIV
Sbjct: 1410 MTINKSQGQTLQRVGVYLRKPVFTHGQLYVAISRVTSRSGLKILIENDDGSCGTQTKNIV 1469
Query: 61 YEEV 64
Y EV
Sbjct: 1470 YSEV 1473
>gb|AAX95983.1| hypothetical protein LOC_Os11g13920 [Oryza sativa (japonica
cultivar-group)]
Length = 2157
Score = 82.4 bits (202), Expect = 3e-15
Identities = 41/64 (64%), Positives = 50/64 (78%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQ+L+ GVYL PVF+HGQL+V +S+VTSR LKILI ++DG +T NIV
Sbjct: 1501 MTINKSQGQTLQRVGVYLRKPVFTHGQLYVAISRVTSRSGLKILIENDDGSCGTQTKNIV 1560
Query: 61 YEEV 64
Y EV
Sbjct: 1561 YSEV 1564
>ref|NP_680269.1| hypothetical protein [Arabidopsis thaliana]
Length = 339
Score = 82.0 bits (201), Expect = 4e-15
Identities = 40/67 (59%), Positives = 54/67 (79%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
+TINKSQGQSL+ G+YLP PVFS GQL+V +S+VTS++ LKILI+D+DG +T+NIV
Sbjct: 262 ITINKSQGQSLEQVGLYLPKPVFSLGQLYVALSRVTSKKGLKILILDKDGNIQKQTTNIV 321
Query: 61 YEEVFQN 67
+ EV +
Sbjct: 322 FYEVLHS 328
>ref|NP_912900.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 1270
Score = 80.9 bits (198), Expect = 8e-15
Identities = 38/68 (55%), Positives = 52/68 (75%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
+TINKSQGQ+L GVYLP+PVFSHGQL+V +S+VTS + L+ILI + E T N+V
Sbjct: 1196 LTINKSQGQTLSRVGVYLPSPVFSHGQLYVALSRVTSPDGLRILIENSPTEHVTSTHNVV 1255
Query: 61 YEEVFQNV 68
Y+E+F ++
Sbjct: 1256 YKEIFNDL 1263
>ref|NP_913627.1| putative helicase [Oryza sativa (japonica cultivar-group)]
Length = 1453
Score = 80.5 bits (197), Expect = 1e-14
Identities = 40/68 (58%), Positives = 51/68 (74%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQ+L GVYL VF+HGQL+V VS+ TSR+ L+ILI D+DG + +T N+V
Sbjct: 1374 MTINKSQGQTLSRVGVYLKKAVFTHGQLYVAVSRSTSRDGLRILIKDDDGACSSKTRNVV 1433
Query: 61 YEEVFQNV 68
Y EV + V
Sbjct: 1434 YHEVLEAV 1441
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.314 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,293,644
Number of Sequences: 2540612
Number of extensions: 3736026
Number of successful extensions: 6972
Number of sequences better than 10.0: 102
Number of HSP's better than 10.0 without gapping: 88
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 6874
Number of HSP's gapped (non-prelim): 107
length of query: 68
length of database: 863,360,394
effective HSP length: 44
effective length of query: 24
effective length of database: 751,573,466
effective search space: 18037763184
effective search space used: 18037763184
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC145221.10