BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC144483.8 + phase: 0
(253 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT80888.1| chloroplast chaperonin 21 [Vitis vinifera] 375 e-103
gb|AAF60293.1| chaperonin 21 precursor [Lycopersicon esculentum] 369 e-101
gb|AAM77651.1| cp10-like protein [Gossypium hirsutum] 369 e-101
emb|CAA09368.1| Cpn21 protein [Arabidopsis thaliana] gi|17065646... 363 3e-99
gb|AAC14026.1| chaperonin 10 [Arabidopsis thaliana] gi|25453528|... 350 2e-95
dbj|BAD35228.1| putative chaperonin 21 precursor [Oryza sativa (... 327 3e-88
dbj|BAD36074.1| putative chaperonin 21 precursor [Oryza sativa (... 320 3e-86
ref|XP_468113.1| putative 20 kDa chaperonin, chloroplast [Oryza ... 317 2e-85
pir||A46176 chaperonin 10 - spinach gi|170107|gb|AAB59307.1| cha... 312 5e-84
dbj|BAD36628.1| putative chaperonin 21 precursor [Oryza sativa (... 295 8e-79
dbj|BAD35227.1| putative chaperonin 21 precursor [Oryza sativa (... 280 2e-74
gb|AAT80889.1| chloroplast chaperonin 21 [Vitis vinifera] 221 2e-56
ref|XP_468112.1| putative 20 kDa chaperonin, chloroplast [Oryza ... 211 1e-53
sp|Q60023|CH10_THEBR 10 kDa chaperonin (Protein Cpn10) (groES pr... 114 3e-24
ref|NP_622246.1| Co-chaperonin GroES (HSP10) [Thermoanaerobacter... 109 6e-23
gb|AAD37975.1| heat shock protein GroES [Rhodothermus marinus] g... 106 5e-22
gb|AAU93932.1| plastid chaperonin 10; chaperonin 20; cpn21 [Heli... 105 1e-21
ref|ZP_00400852.1| Chaperonin Cpn10 [Anaeromyxobacter dehalogena... 105 2e-21
ref|YP_011194.1| chaperonin, 10 kDa [Desulfovibrio vulgaris subs... 104 2e-21
gb|AAO47714.1| putative chaperonin 21 precursor [Pteris vittata] 103 6e-21
>gb|AAT80888.1| chloroplast chaperonin 21 [Vitis vinifera]
Length = 251
Score = 375 bits (964), Expect = e-103
Identities = 190/249 (76%), Positives = 222/249 (88%), Gaps = 2/249 (0%)
Query: 7 TASSISTRNLSSFERLRTSSIQFPRNNARIAI--LTQWSLPSMVVKAATVVAPKHTTVKP 64
TA +ISTR+L SFE LR S+++ + LTQ S S+VV+AATVV PK+T++KP
Sbjct: 3 TAPTISTRSLPSFEGLRPSTVRISSMGLPLKAGGLTQRSFRSLVVRAATVVTPKYTSLKP 62
Query: 65 LGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVKAGAQVV 124
LGDRVLVKIK AEEKT GGILLP+TAQ+KPQGGEVVA+G+GKT+GKNK+DI VK GAQVV
Sbjct: 63 LGDRVLVKIKTAEEKTVGGILLPTTAQTKPQGGEVVAVGEGKTIGKNKLDICVKTGAQVV 122
Query: 125 YSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEKTAGGLLL 184
YSKYAGTEVEF+GS HLILK++DIVGILET++VKDLKPLNDRVLIKVAEAEEKTAGGLLL
Sbjct: 123 YSKYAGTEVEFNGSNHLILKEDDIVGILETDDVKDLKPLNDRVLIKVAEAEEKTAGGLLL 182
Query: 185 TEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSKYAGNDFKGKDGSDYIALR 244
TEA+K+KPSIGTV+AVGPGP+D++G RKPLS+ PGNTVLYSKYAGNDFKG DGSDYIAL+
Sbjct: 183 TEASKEKPSIGTVVAVGPGPLDEDGKRKPLSVSPGNTVLYSKYAGNDFKGSDGSDYIALK 242
Query: 245 ASDVMAILS 253
ASD+MA+LS
Sbjct: 243 ASDIMAVLS 251
>gb|AAF60293.1| chaperonin 21 precursor [Lycopersicon esculentum]
Length = 253
Score = 369 bits (948), Expect = e-101
Identities = 190/253 (75%), Positives = 217/253 (85%)
Query: 1 MATTQLTASSISTRNLSSFERLRTSSIQFPRNNARIAILTQWSLPSMVVKAATVVAPKHT 60
MA+TQLTASSIS +SFE LR++ I + A + S +VVKAAT VAPK+T
Sbjct: 1 MASTQLTASSISGNGFASFEGLRSTCIVKTVSFAPLKHNNSRSFSRLVVKAATTVAPKYT 60
Query: 61 TVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVKAG 120
T+KPLGDRVLVKIK AEEKT GGILLP + QSKP GGEVVA+G+G + GK KVDISVK G
Sbjct: 61 TLKPLGDRVLVKIKTAEEKTVGGILLPVSVQSKPNGGEVVAVGEGHSAGKTKVDISVKTG 120
Query: 121 AQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEKTAG 180
AQV+YSKYAGTEVEFDGSKHLILK++DIVGILET++VKDL+PLNDRVLIKVAEAEEKTAG
Sbjct: 121 AQVIYSKYAGTEVEFDGSKHLILKEDDIVGILETDDVKDLQPLNDRVLIKVAEAEEKTAG 180
Query: 181 GLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSKYAGNDFKGKDGSDY 240
GLLLTEA K+KPSIGT+IAVGPGP+D+EGNRKPLS+ PGNTVLYSKYAG++FKG DGSDY
Sbjct: 181 GLLLTEAAKEKPSIGTIIAVGPGPLDEEGNRKPLSVSPGNTVLYSKYAGSEFKGADGSDY 240
Query: 241 IALRASDVMAILS 253
I LR SDVMA+LS
Sbjct: 241 ITLRVSDVMAVLS 253
>gb|AAM77651.1| cp10-like protein [Gossypium hirsutum]
Length = 256
Score = 369 bits (947), Expect = e-101
Identities = 187/256 (73%), Positives = 224/256 (87%), Gaps = 3/256 (1%)
Query: 1 MATTQLTASSI--STRNLSSFERLRTSSIQFPR-NNARIAILTQWSLPSMVVKAATVVAP 57
MAT+QLTASS+ S RNL+S + LR S+++F + +T S +VVKAATVVAP
Sbjct: 1 MATSQLTASSVTASARNLASLQGLRLSTVKFSSFGTLKPGAVTSRSFRGLVVKAATVVAP 60
Query: 58 KHTTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISV 117
K+T+VKPLGDRVLVKIK+ EEKT+GGILLP+TAQSKPQGGEVVA+G+GKT+G K + SV
Sbjct: 61 KYTSVKPLGDRVLVKIKETEEKTEGGILLPTTAQSKPQGGEVVAVGEGKTIGNTKSESSV 120
Query: 118 KAGAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEK 177
K GAQV+YSKYAGTEVEF+G+ HL+LK++DIVG+LET+++KDLKPLNDRV IKV+EAEEK
Sbjct: 121 KTGAQVIYSKYAGTEVEFNGANHLLLKEDDIVGLLETDDIKDLKPLNDRVFIKVSEAEEK 180
Query: 178 TAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSKYAGNDFKGKDG 237
TAGGLLLTEA+K+KPSIGTVIAVGPG +D+EGN KPLS+ PGNTVLYSKYAGNDFKG DG
Sbjct: 181 TAGGLLLTEASKEKPSIGTVIAVGPGTLDEEGNLKPLSVSPGNTVLYSKYAGNDFKGNDG 240
Query: 238 SDYIALRASDVMAILS 253
S+YIALRASDVMA+LS
Sbjct: 241 SNYIALRASDVMAVLS 256
>emb|CAA09368.1| Cpn21 protein [Arabidopsis thaliana] gi|17065646|gb|AAL33817.1|
putative chloroplast Cpn21 protein [Arabidopsis
thaliana] gi|14334612|gb|AAK59484.1| putative
chloroplast Cpn21 protein [Arabidopsis thaliana]
gi|14587373|dbj|BAB61619.1| chaperonin 20 [Arabidopsis
thaliana] gi|15242045|ref|NP_197572.1| 20 kDa
chaperonin, chloroplast (CPN21) (CHCPN10) (CPN20)
[Arabidopsis thaliana] gi|30687936|ref|NP_851045.1| 20
kDa chaperonin, chloroplast (CPN21) (CHCPN10) (CPN20)
[Arabidopsis thaliana] gi|16226911|gb|AAL16296.1|
AT5g20720/T1M15_120 [Arabidopsis thaliana]
gi|16226815|gb|AAL16269.1| AT5g20720/T1M15_120
[Arabidopsis thaliana] gi|10179872|gb|AAG13931.1|
chaperonin 10 [Arabidopsis thaliana]
gi|25453529|pir||T52613 chaperonin 21 precursor,
chloroplast [imported] - Arabidopsis thaliana
gi|12643263|sp|O65282|CH1C_ARATH 20 kDa chaperonin,
chloroplast precursor (Protein Cpn21) (Chloroplast
protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10)
(Chaperonin 20)
Length = 253
Score = 363 bits (931), Expect = 3e-99
Identities = 187/255 (73%), Positives = 221/255 (86%), Gaps = 4/255 (1%)
Query: 1 MATTQLTASSI--STRNLSSFERLRTSSIQFPRNNARIAILTQWSLPSMVVKAATVVAPK 58
MA TQLTAS + S R+L+S + LR SS++F ++ + L Q +VVKAA+VVAPK
Sbjct: 1 MAATQLTASPVTMSARSLASLDGLRASSVKF--SSLKPGTLRQSQFRRLVVKAASVVAPK 58
Query: 59 HTTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVK 118
+T++KPLGDRVLVKIK+AEEKT GGILLPSTAQSKPQGGEVVA+G+G+T+GKNK+DI+V
Sbjct: 59 YTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVP 118
Query: 119 AGAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEKT 178
GAQ++YSKYAGTEVEF+ KHLILK++DIVGILETE++KDLKPLNDRV IKVAEAEEKT
Sbjct: 119 TGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKT 178
Query: 179 AGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSKYAGNDFKGKDGS 238
AGGLLLTE TK+KPSIGTVIAVGPG +D+EG PL + G+TVLYSKYAGNDFKGKDGS
Sbjct: 179 AGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDGS 238
Query: 239 DYIALRASDVMAILS 253
+YIALRASDVMAILS
Sbjct: 239 NYIALRASDVMAILS 253
>gb|AAC14026.1| chaperonin 10 [Arabidopsis thaliana] gi|25453528|pir||T52122
chaperonin 10 [imported] - Arabidopsis thaliana
Length = 254
Score = 350 bits (899), Expect = 2e-95
Identities = 184/256 (71%), Positives = 218/256 (84%), Gaps = 5/256 (1%)
Query: 1 MATTQLTASSI--STRNLSSFERLRTSSIQFPRNNARIAILTQWSLPSMVVKAATVVAPK 58
MA TQLTAS + S R+L+S + LR SS++ ++ + L Q +VVKAA+VVAPK
Sbjct: 1 MAATQLTASPVTMSARSLASLDGLRASSVKV--SSLKPGTLRQSQFRRLVVKAASVVAPK 58
Query: 59 HTTVKPLGDRVLVKIKDAEEKTQGGIL-LPSTAQSKPQGGEVVAIGDGKTVGKNKVDISV 117
+T++KPLGDRVLVKIK+AEEKT GGIL STAQSKPQGGEVVA+G+G+T+GKNK+DI+V
Sbjct: 59 YTSIKPLGDRVLVKIKEAEEKTLGGILTFHSTAQSKPQGGEVVAVGEGRTIGKNKIDITV 118
Query: 118 KAGAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEK 177
GAQ++YSKYAGTEVEF+ KHLILK++DIVGILETE++KDLKPLNDRV IKVAEAEEK
Sbjct: 119 PTGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEK 178
Query: 178 TAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSKYAGNDFKGKDG 237
TAGGLLLTE TK+KPSIGTVIAVGPG +D+EG PL + G+TVLYSKYAGNDFKGKDG
Sbjct: 179 TAGGLLLTETTKEKPSIGTVIAVGPGSLDEEGKITPLPVSTGSTVLYSKYAGNDFKGKDG 238
Query: 238 SDYIALRASDVMAILS 253
S+YIALRASDVMAILS
Sbjct: 239 SNYIALRASDVMAILS 254
>dbj|BAD35228.1| putative chaperonin 21 precursor [Oryza sativa (japonica
cultivar-group)]
Length = 252
Score = 327 bits (837), Expect = 3e-88
Identities = 167/258 (64%), Positives = 217/258 (83%), Gaps = 11/258 (4%)
Query: 1 MATTQLTASSIS----TRN-LSSFERLRTSSIQFPRNNARIAILTQWSLPSMVVKAATVV 55
M++ QL+ + ++ T+N SSF+ LR + + R+ + S S+VVKAATVV
Sbjct: 1 MSSVQLSGAGVAAVAFTKNGASSFDGLRLAP-----PSVRVCSSRRPSR-SLVVKAATVV 54
Query: 56 APKHTTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDI 115
PK+T++KPLGDRVLVK+ AEEKT GGILLPSTAQSKPQGGEVVA+G+G+T+G KV++
Sbjct: 55 TPKYTSLKPLGDRVLVKLGAAEEKTVGGILLPSTAQSKPQGGEVVAVGEGRTIGDKKVEV 114
Query: 116 SVKAGAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAE 175
S++ GA+VVYSKYAGTEV+F+ +KHLILK++DI+G+LET++VKD+KPLNDRVLIKVAEAE
Sbjct: 115 SLQIGAEVVYSKYAGTEVQFNDTKHLILKEDDIIGVLETDDVKDMKPLNDRVLIKVAEAE 174
Query: 176 EKTAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSKYAGNDFKGK 235
+KTAGGL+LTE TK+KPSIGTV+AVGPGP+DDEG R+PLS+ G+TV+YSKYAG++FKG
Sbjct: 175 DKTAGGLILTETTKEKPSIGTVVAVGPGPLDDEGKRQPLSVSAGSTVMYSKYAGSEFKGA 234
Query: 236 DGSDYIALRASDVMAILS 253
DG++YI LR SDVMA+LS
Sbjct: 235 DGTNYIVLRVSDVMAVLS 252
>dbj|BAD36074.1| putative chaperonin 21 precursor [Oryza sativa (japonica
cultivar-group)]
Length = 245
Score = 320 bits (819), Expect = 3e-86
Identities = 154/207 (74%), Positives = 193/207 (92%), Gaps = 1/207 (0%)
Query: 47 MVVKAATVVAPKHTTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGK 106
+VV+AATVV+PK+T++KPLGDRVLVKIK +++KT GGILLP++ QSKPQGG+VVA+G+G+
Sbjct: 40 LVVRAATVVSPKYTSIKPLGDRVLVKIKTSDDKTVGGILLPTSVQSKPQGGQVVAVGEGR 99
Query: 107 TVGKNKVDISVKAGAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDR 166
++G + ++ISV GAQVVYSKYAGTE+EFDGS HLILK++DI+GIL+T++VKDLKPLNDR
Sbjct: 100 SMGSDSIEISVPVGAQVVYSKYAGTELEFDGSDHLILKEDDIIGILDTDDVKDLKPLNDR 159
Query: 167 VLIKVAEAEEKTAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSK 226
VLIKVAEAEEKTAGGLLLT+ATK+KPSIGTV AVGPGP+ ++G+RKPLSI PGNTV+YSK
Sbjct: 160 VLIKVAEAEEKTAGGLLLTQATKEKPSIGTVTAVGPGPLVEDGSRKPLSITPGNTVMYSK 219
Query: 227 YAGNDFKGKDGSDYIALRASDVMAILS 253
YAG++FKG+DG +YI LR SDVMA+LS
Sbjct: 220 YAGSEFKGEDG-EYIVLRVSDVMAVLS 245
>ref|XP_468113.1| putative 20 kDa chaperonin, chloroplast [Oryza sativa (japonica
cultivar-group)] gi|51964452|ref|XP_507011.1| PREDICTED
OJ1369_G08.10-2 gene product [Oryza sativa (japonica
cultivar-group)] gi|47497404|dbj|BAD19441.1| putative 20
kDa chaperonin, chloroplast [Oryza sativa (japonica
cultivar-group)]
Length = 255
Score = 317 bits (813), Expect = 2e-85
Identities = 166/261 (63%), Positives = 208/261 (79%), Gaps = 14/261 (5%)
Query: 1 MATTQLTASSI-----STRNLSSFERLRTSSIQFPRNNARIAILTQWSLPS--MVVKAAT 53
MA Q +A+ + +T+ ++S + LR A + +L Q PS +VV+AA
Sbjct: 1 MAPVQFSAAGVGAVAFATKGMASRDALRLPP------PAAVRVLRQAPRPSRGLVVRAAA 54
Query: 54 V-VAPKHTTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNK 112
VAPK+TT+KPL DRVLVKIK AE+KT GGILLPS AQSKPQGGEVVAIG+G+TVG NK
Sbjct: 55 ASVAPKYTTLKPLADRVLVKIKSAEQKTTGGILLPSAAQSKPQGGEVVAIGEGRTVGDNK 114
Query: 113 VDISVKAGAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVA 172
V++S++ G+QVVYSKYAGTEVE + S HLILK++DI+GILET++ KD+KPL+DRVLIKVA
Sbjct: 115 VEVSIQVGSQVVYSKYAGTEVELNDSNHLILKEDDIIGILETDDAKDMKPLSDRVLIKVA 174
Query: 173 EAEEKTAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSKYAGNDF 232
EAE+KT GGLLLTE TK+KPSIGTV+AVGPGP+D+EG R PLS+ G+TVLYSKYAG++F
Sbjct: 175 EAEDKTPGGLLLTETTKEKPSIGTVVAVGPGPLDEEGKRIPLSVSAGSTVLYSKYAGSEF 234
Query: 233 KGKDGSDYIALRASDVMAILS 253
KG DG+ YI LR SD+MA+LS
Sbjct: 235 KGSDGTSYIVLRVSDLMAVLS 255
>pir||A46176 chaperonin 10 - spinach gi|170107|gb|AAB59307.1| chaperonin 10
gi|399241|sp|Q02073|CH1C_SPIOL 20 kDa chaperonin,
chloroplast precursor (Protein Cpn21) (Chloroplast
protein Cpn10) (Chloroplast chaperonin 10) (Ch-CPN10)
Length = 255
Score = 312 bits (800), Expect = 5e-84
Identities = 161/256 (62%), Positives = 198/256 (76%), Gaps = 4/256 (1%)
Query: 1 MATTQLTA-SSISTRNLSSFERLRTSSIQFPRNNARIAI--LTQWSLPSMVVKAATVVAP 57
MA T LT+ SS++ L SFE LR++S + N +A T S +VV+AA++
Sbjct: 1 MAATHLTSTSSLTINTLPSFEGLRSAS-GISKINVSVAYPSFTSRSFRGLVVRAASITTS 59
Query: 58 KHTTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISV 117
K+T+VKPLGDRVL+K K EEKT GI LP+ AQ KPQ GEVVAIG GK VG K+ ++V
Sbjct: 60 KYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPVAV 119
Query: 118 KAGAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEK 177
K GA+VVYSKY GTE+E DGS HLI+K++DI+GILET++VKDLKPLNDR+LIKVAE E K
Sbjct: 120 KTGAEVVYSKYTGTEIEVDGSSHLIVKEDDIIGILETDDVKDLKPLNDRLLIKVAEVENK 179
Query: 178 TAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSKYAGNDFKGKDG 237
T+GGLLL E++K+KPS GTV+A GPG +D+EGNR PL + GNTVLYSKYAGNDFKG DG
Sbjct: 180 TSGGLLLAESSKEKPSFGTVVATGPGVLDEEGNRIPLPVCSGNTVLYSKYAGNDFKGVDG 239
Query: 238 SDYIALRASDVMAILS 253
SDY+ LR SDVMA+LS
Sbjct: 240 SDYMVLRVSDVMAVLS 255
>dbj|BAD36628.1| putative chaperonin 21 precursor [Oryza sativa (japonica
cultivar-group)] gi|51090752|dbj|BAD35232.1| putative
chaperonin 21 precursor [Oryza sativa (japonica
cultivar-group)]
Length = 216
Score = 295 bits (755), Expect = 8e-79
Identities = 144/204 (70%), Positives = 181/204 (88%), Gaps = 2/204 (0%)
Query: 50 KAATVVAPKHTTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVG 109
K +T+ HT V+ DRVLVK+ AEEKT GGILLPSTAQSKPQGGEVVA+G+G+T+G
Sbjct: 15 KISTLHPCCHTIVER--DRVLVKLGAAEEKTVGGILLPSTAQSKPQGGEVVAVGEGRTIG 72
Query: 110 KNKVDISVKAGAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLI 169
KV++S++ GA+VVYSKYAGTEV+F+ +KHLILK++DI+G+LET++VKD+KPLNDRVLI
Sbjct: 73 DKKVEVSLQIGAEVVYSKYAGTEVQFNDTKHLILKEDDIIGVLETDDVKDMKPLNDRVLI 132
Query: 170 KVAEAEEKTAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSKYAG 229
KVAEAE+KTAGGL+LTE TK+KPSIGTV+AVGPGP+DDEG R+PLS+ G+TV+YSKYAG
Sbjct: 133 KVAEAEDKTAGGLILTETTKEKPSIGTVVAVGPGPLDDEGKRQPLSVSAGSTVMYSKYAG 192
Query: 230 NDFKGKDGSDYIALRASDVMAILS 253
++FKG DG++YI LR SDVMA+LS
Sbjct: 193 SEFKGADGTNYIVLRVSDVMAVLS 216
>dbj|BAD35227.1| putative chaperonin 21 precursor [Oryza sativa (japonica
cultivar-group)]
Length = 235
Score = 280 bits (717), Expect = 2e-74
Identities = 145/228 (63%), Positives = 190/228 (82%), Gaps = 11/228 (4%)
Query: 1 MATTQLTASSIS----TRN-LSSFERLRTSSIQFPRNNARIAILTQWSLPSMVVKAATVV 55
M++ QL+ + ++ T+N SSF+ LR + + R+ + S S+VVKAATVV
Sbjct: 1 MSSVQLSGAGVAAVAFTKNGASSFDGLRLAP-----PSVRVCSSRRPSR-SLVVKAATVV 54
Query: 56 APKHTTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDI 115
PK+T++KPLGDRVLVK+ AEEKT GGILLPSTAQSKPQGGEVVA+G+G+T+G KV++
Sbjct: 55 TPKYTSLKPLGDRVLVKLGAAEEKTVGGILLPSTAQSKPQGGEVVAVGEGRTIGDKKVEV 114
Query: 116 SVKAGAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAE 175
S++ GA+VVYSKYAGTEV+F+ +KHLILK++DI+G+LET++VKD+KPLNDRVLIKVAEAE
Sbjct: 115 SLQIGAEVVYSKYAGTEVQFNDTKHLILKEDDIIGVLETDDVKDMKPLNDRVLIKVAEAE 174
Query: 176 EKTAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVL 223
+KTAGGL+LTE TK+KPSIGTV+AVGPGP+DDEG R+PLS+ G+TV+
Sbjct: 175 DKTAGGLILTETTKEKPSIGTVVAVGPGPLDDEGKRQPLSVSAGSTVI 222
Score = 75.9 bits (185), Expect = 1e-12
Identities = 44/115 (38%), Positives = 68/115 (58%), Gaps = 6/115 (5%)
Query: 138 SKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKDKPSIGTV 197
S+ L++K +V T + LKPL DRVL+K+ AEEKT GG+LL + KP G V
Sbjct: 43 SRSLVVKAATVV----TPKYTSLKPLGDRVLVKLGAAEEKTVGGILLPSTAQSKPQGGEV 98
Query: 198 IAVGPGPVDDEGNRKPLSILPGNTVLYSKYAGNDFKGKDGSDYIALRASDVMAIL 252
+AVG G + + +S+ G V+YSKYAG + + D + ++ L+ D++ +L
Sbjct: 99 VAVGEGRTIGD-KKVEVSLQIGAEVVYSKYAGTEVQFND-TKHLILKEDDIIGVL 151
>gb|AAT80889.1| chloroplast chaperonin 21 [Vitis vinifera]
Length = 125
Score = 221 bits (562), Expect = 2e-56
Identities = 106/125 (84%), Positives = 121/125 (96%)
Query: 129 AGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEAT 188
AGTEVEF+GS HLILK++DIVGILET++VKDLKPLNDRVLIKVAEAEEKTAGGLLLTEA+
Sbjct: 1 AGTEVEFNGSNHLILKEDDIVGILETDDVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEAS 60
Query: 189 KDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSKYAGNDFKGKDGSDYIALRASDV 248
K+KPSIGTV+AVGPGP+D++G RKPLS+ PGNTVLYSKYAGNDFKG DGSDYIAL+ASD+
Sbjct: 61 KEKPSIGTVVAVGPGPLDEDGKRKPLSVSPGNTVLYSKYAGNDFKGSDGSDYIALKASDI 120
Query: 249 MAILS 253
MA+LS
Sbjct: 121 MAVLS 125
Score = 81.3 bits (199), Expect = 2e-14
Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 62 VKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDG--KTVGKNKVDISVKA 119
+KPL DRVL+K+ +AEEKT GG+LL ++ KP G VVA+G G GK K +SV
Sbjct: 32 LKPLNDRVLIKVAEAEEKTAGGLLLTEASKEKPSIGTVVAVGPGPLDEDGKRK-PLSVSP 90
Query: 120 GAQVVYSKYAGTEVE-FDGSKHLILKDEDIVGIL 152
G V+YSKYAG + + DGS ++ LK DI+ +L
Sbjct: 91 GNTVLYSKYAGNDFKGSDGSDYIALKASDIMAVL 124
>ref|XP_468112.1| putative 20 kDa chaperonin, chloroplast [Oryza sativa (japonica
cultivar-group)] gi|47497405|dbj|BAD19442.1| putative 20
kDa chaperonin, chloroplast [Oryza sativa (japonica
cultivar-group)]
Length = 195
Score = 211 bits (538), Expect = 1e-53
Identities = 102/149 (68%), Positives = 125/149 (83%)
Query: 105 GKTVGKNKVDISVKAGAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLN 164
G V ++ K G+QVVYSKYAGTEVE + S HLILK++DI+GILET++ KD+KPL+
Sbjct: 47 GLVVRAAAASVAPKVGSQVVYSKYAGTEVELNDSNHLILKEDDIIGILETDDAKDMKPLS 106
Query: 165 DRVLIKVAEAEEKTAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLY 224
DRVLIKVAEAE+KT GGLLLTE TK+KPSIGTV+AVGPGP+D+EG R PLS+ G+TVLY
Sbjct: 107 DRVLIKVAEAEDKTPGGLLLTETTKEKPSIGTVVAVGPGPLDEEGKRIPLSVSAGSTVLY 166
Query: 225 SKYAGNDFKGKDGSDYIALRASDVMAILS 253
SKYAG++FKG DG+ YI LR SD+MA+LS
Sbjct: 167 SKYAGSEFKGSDGTSYIVLRVSDLMAVLS 195
Score = 86.3 bits (212), Expect = 7e-16
Identities = 43/93 (46%), Positives = 66/93 (70%), Gaps = 2/93 (2%)
Query: 62 VKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNK-VDISVKAG 120
+KPL DRVL+K+ +AE+KT GG+LL T + KP G VVA+G G + K + +SV AG
Sbjct: 102 MKPLSDRVLIKVAEAEDKTPGGLLLTETTKEKPSIGTVVAVGPGPLDEEGKRIPLSVSAG 161
Query: 121 AQVVYSKYAGTEVE-FDGSKHLILKDEDIVGIL 152
+ V+YSKYAG+E + DG+ +++L+ D++ +L
Sbjct: 162 STVLYSKYAGSEFKGSDGTSYIVLRVSDLMAVL 194
>sp|Q60023|CH10_THEBR 10 kDa chaperonin (Protein Cpn10) (groES protein)
gi|2119965|pir||S72613 chaperonin groES -
Thermoanaerobacter brockii gi|1326190|gb|AAB00558.1|
chaperonin 10
Length = 94
Score = 114 bits (284), Expect = 3e-24
Identities = 51/92 (55%), Positives = 74/92 (80%)
Query: 62 VKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVKAGA 121
+KPLGDRV+VK+ AEE T+GG++LP TA+ KPQ GEVVA+G G+ + KV++ VK G
Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKVGD 62
Query: 122 QVVYSKYAGTEVEFDGSKHLILKDEDIVGILE 153
+V++SKYAGTEV+ DG ++L+L++ DI+ I+E
Sbjct: 63 RVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94
Score = 86.7 bits (213), Expect = 6e-16
Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 160 LKPLNDRVLIKVAEAEEKTAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPG 219
LKPL DRV++KV +AEE T GG++L K+KP G V+AVG G D G + L + G
Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYID-GKKVELEVKVG 61
Query: 220 NTVLYSKYAGNDFKGKDGSDYIALRASDVMAIL 252
+ V++SKYAG + K DG +Y+ LR SD++AI+
Sbjct: 62 DRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
>ref|NP_622246.1| Co-chaperonin GroES (HSP10) [Thermoanaerobacter tengcongensis MB4]
gi|20515565|gb|AAM23850.1| Co-chaperonin GroES (HSP10)
[Thermoanaerobacter tengcongensis MB4]
gi|23813778|sp|Q8R5T8|CH10_THETN 10 kDa chaperonin
(Protein Cpn10) (groES protein)
Length = 94
Score = 109 bits (273), Expect = 6e-23
Identities = 49/92 (53%), Positives = 73/92 (79%)
Query: 62 VKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVKAGA 121
+KPLGDRV+VK+ +EE T+GG++LP TA+ KPQ GEVVA+G G+ + +V+ VK G
Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQYIDGKRVEPEVKVGD 62
Query: 122 QVVYSKYAGTEVEFDGSKHLILKDEDIVGILE 153
+V++SKYAGTEV+ DG ++L+L++ DI+ I+E
Sbjct: 63 RVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94
Score = 87.0 bits (214), Expect = 4e-16
Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 160 LKPLNDRVLIKVAEAEEKTAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPG 219
LKPL DRV++KV ++EE T GG++L K+KP G V+AVGPG D G R + G
Sbjct: 3 LKPLGDRVVVKVIQSEEVTKGGVILPGTAKEKPQQGEVVAVGPGQYID-GKRVEPEVKVG 61
Query: 220 NTVLYSKYAGNDFKGKDGSDYIALRASDVMAIL 252
+ V++SKYAG + K DG +Y+ LR SD++AI+
Sbjct: 62 DRVIFSKYAGTEVK-LDGEEYLLLRESDILAII 93
>gb|AAD37975.1| heat shock protein GroES [Rhodothermus marinus]
gi|23813835|sp|Q9XCB0|CH10_RHOMR 10 kDa chaperonin
(Protein Cpn10) (groES protein)
Length = 100
Score = 106 bits (265), Expect = 5e-22
Identities = 46/95 (48%), Positives = 71/95 (74%)
Query: 62 VKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKVDISVKAGA 121
+KPL DRV++K + EEKT+ G+ +P TA+ KPQ G V+A+G G+ K+++SVK G
Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRVENGTKIEMSVKEGD 65
Query: 122 QVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEE 156
+V+Y KYAGTE+ DG ++LI+++ DI+GI+E E+
Sbjct: 66 KVLYGKYAGTEITIDGEEYLIMRETDILGIIEEEK 100
Score = 85.5 bits (210), Expect = 1e-15
Identities = 43/93 (46%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 160 LKPLNDRVLIKVAEAEEKTAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPG 219
+KPL+DRV+IK EEKT GL + + K+KP GTVIAVGPG V++ G + +S+ G
Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRVEN-GTKIEMSVKEG 64
Query: 220 NTVLYSKYAGNDFKGKDGSDYIALRASDVMAIL 252
+ VLY KYAG + DG +Y+ +R +D++ I+
Sbjct: 65 DKVLYGKYAGTEIT-IDGEEYLIMRETDILGII 96
>gb|AAU93932.1| plastid chaperonin 10; chaperonin 20; cpn21 [Helicosporidium sp. ex
Simulium jonesii]
Length = 85
Score = 105 bits (262), Expect = 1e-21
Identities = 46/80 (57%), Positives = 67/80 (83%)
Query: 120 GAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILETEEVKDLKPLNDRVLIKVAEAEEKTA 179
G VVYSKYAGTE+ F + H+ILK++D++G+LE E+V L+PL DR+L++VAEA ++TA
Sbjct: 1 GQTVVYSKYAGTEIRFQDADHIILKEDDVIGVLEGEDVSALQPLQDRLLVRVAEAADQTA 60
Query: 180 GGLLLTEATKDKPSIGTVIA 199
GG+ LTEA+KD+P++G V+A
Sbjct: 61 GGVYLTEASKDQPTLGVVVA 80
Score = 37.7 bits (86), Expect = 0.31
Identities = 16/42 (38%), Positives = 29/42 (68%)
Query: 60 TTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVA 101
+ ++PL DR+LV++ +A ++T GG+ L ++ +P G VVA
Sbjct: 39 SALQPLQDRLLVRVAEAADQTAGGVYLTEASKDQPTLGVVVA 80
Score = 35.4 bits (80), Expect = 1.5
Identities = 16/34 (47%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 219 GNTVLYSKYAGNDFKGKDGSDYIALRASDVMAIL 252
G TV+YSKYAG + + +D +D+I L+ DV+ +L
Sbjct: 1 GQTVVYSKYAGTEIRFQD-ADHIILKEDDVIGVL 33
>ref|ZP_00400852.1| Chaperonin Cpn10 [Anaeromyxobacter dehalogenans 2CP-C]
gi|66777386|gb|EAL78482.1| Chaperonin Cpn10
[Anaeromyxobacter dehalogenans 2CP-C]
Length = 97
Score = 105 bits (261), Expect = 2e-21
Identities = 49/95 (51%), Positives = 74/95 (77%), Gaps = 1/95 (1%)
Query: 60 TTVKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNKV-DISVK 118
T ++PL DR++VK EEKT+GGI++P +A+ KP G+V+A G+GK + KV + VK
Sbjct: 2 TKIRPLQDRLIVKRVQEEEKTKGGIIIPDSAKEKPIEGKVIAAGNGKVLEDGKVRPLDVK 61
Query: 119 AGAQVVYSKYAGTEVEFDGSKHLILKDEDIVGILE 153
AG +V++SKYAGTEV+ DG +HLI+++EDI+G++E
Sbjct: 62 AGDRVLFSKYAGTEVKIDGEEHLIMREEDILGVIE 96
Score = 84.3 bits (207), Expect = 3e-15
Identities = 37/93 (39%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 160 LKPLNDRVLIKVAEAEEKTAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPG 219
++PL DR+++K + EEKT GG+++ ++ K+KP G VIA G G V ++G +PL + G
Sbjct: 4 IRPLQDRLIVKRVQEEEKTKGGIIIPDSAKEKPIEGKVIAAGNGKVLEDGKVRPLDVKAG 63
Query: 220 NTVLYSKYAGNDFKGKDGSDYIALRASDVMAIL 252
+ VL+SKYAG + K DG +++ +R D++ ++
Sbjct: 64 DRVLFSKYAGTEVK-IDGEEHLIMREEDILGVI 95
>ref|YP_011194.1| chaperonin, 10 kDa [Desulfovibrio vulgaris subsp. vulgaris str.
Hildenborough] gi|46449803|gb|AAS96453.1| chaperonin, 10
kDa [Desulfovibrio vulgaris subsp. vulgaris str.
Hildenborough]
Length = 95
Score = 104 bits (260), Expect = 2e-21
Identities = 50/93 (53%), Positives = 71/93 (75%), Gaps = 1/93 (1%)
Query: 62 VKPLGDRVLVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGKTVGKNK-VDISVKAG 120
+KPL DRVLVK ++EEKT GG+ +P TA+ KP GEVVA G GKT K V ++VKAG
Sbjct: 3 LKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKAG 62
Query: 121 AQVVYSKYAGTEVEFDGSKHLILKDEDIVGILE 153
V+++KYAGTE++ DG +HL+++++DI+ I+E
Sbjct: 63 DMVLFNKYAGTEIKIDGVEHLVMREDDILAIIE 95
Score = 95.9 bits (237), Expect = 9e-19
Identities = 45/94 (47%), Positives = 67/94 (70%), Gaps = 1/94 (1%)
Query: 159 DLKPLNDRVLIKVAEAEEKTAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILP 218
+LKPLNDRVL+K E+EEKTAGGL + + K+KPS G V+A GPG D+G +++
Sbjct: 2 NLKPLNDRVLVKRLESEEKTAGGLYIPDTAKEKPSRGEVVAAGPGKTADDGKLVAMTVKA 61
Query: 219 GNTVLYSKYAGNDFKGKDGSDYIALRASDVMAIL 252
G+ VL++KYAG + K DG +++ +R D++AI+
Sbjct: 62 GDMVLFNKYAGTEIK-IDGVEHLVMREDDILAII 94
>gb|AAO47714.1| putative chaperonin 21 precursor [Pteris vittata]
Length = 72
Score = 103 bits (256), Expect = 6e-21
Identities = 49/71 (69%), Positives = 59/71 (83%)
Query: 168 LIKVAEAEEKTAGGLLLTEATKDKPSIGTVIAVGPGPVDDEGNRKPLSILPGNTVLYSKY 227
LIKVAEAE KTAGG+LLT++ K+KP IGTV AVGPGP ++G RKPL I GN+V+YSKY
Sbjct: 1 LIKVAEAEGKTAGGVLLTDSAKEKPVIGTVSAVGPGPYAEDGTRKPLDIAVGNSVMYSKY 60
Query: 228 AGNDFKGKDGS 238
AG+DFK DG+
Sbjct: 61 AGSDFKSSDGT 71
Score = 51.2 bits (121), Expect = 3e-05
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 70 LVKIKDAEEKTQGGILLPSTAQSKPQGGEVVAIGDGK-TVGKNKVDISVKAGAQVVYSKY 128
L+K+ +AE KT GG+LL +A+ KP G V A+G G + + + G V+YSKY
Sbjct: 1 LIKVAEAEGKTAGGVLLTDSAKEKPVIGTVSAVGPGPYAEDGTRKPLDIAVGNSVMYSKY 60
Query: 129 AGTE 132
AG++
Sbjct: 61 AGSD 64
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.131 0.354
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 421,126,606
Number of Sequences: 2540612
Number of extensions: 18590267
Number of successful extensions: 39477
Number of sequences better than 10.0: 665
Number of HSP's better than 10.0 without gapping: 595
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 37473
Number of HSP's gapped (non-prelim): 1278
length of query: 253
length of database: 863,360,394
effective HSP length: 125
effective length of query: 128
effective length of database: 545,783,894
effective search space: 69860338432
effective search space used: 69860338432
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 73 (32.7 bits)
Medicago: description of AC144483.8