BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC142094.3 + phase: 0
(85 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_464350.1| putative zinc-binding protein [Oryza sativa (ja... 72 3e-12
dbj|BAB69816.1| zinc-binding protein [Pisum sativum] 72 3e-12
gb|AAW39002.1| At3g60670 [Arabidopsis thaliana] gi|56121894|gb|A... 72 5e-12
dbj|BAD45399.1| putative zinc-binding protein [Oryza sativa (jap... 65 6e-10
gb|AAF98180.1| F17F8.4 [Arabidopsis thaliana] 65 6e-10
ref|XP_464305.1| putative zinc-binding protein [Oryza sativa (ja... 64 1e-09
ref|NP_174999.1| zinc-binding family protein [Arabidopsis thalia... 58 5e-08
ref|XP_467165.1| putative zinc-binding protein [Oryza sativa (ja... 58 5e-08
gb|AAM61414.1| unknown [Arabidopsis thaliana] 57 9e-08
gb|AAM91057.1| At1g21000/F9H16_1 [Arabidopsis thaliana] gi|14030... 57 9e-08
gb|AAK43934.1| Unknown protein [Arabidopsis thaliana] gi|2533790... 57 9e-08
ref|XP_463288.1| B1108H10.20 [Oryza sativa (japonica cultivar-gr... 56 2e-07
dbj|BAD73580.1| zinc-binding protein-like [Oryza sativa (japonic... 56 2e-07
emb|CAB78792.1| putative protein [Arabidopsis thaliana] gi|28945... 54 8e-07
ref|NP_193524.2| zinc-binding family protein [Arabidopsis thaliana] 54 8e-07
gb|AAG51950.1| unknown protein; 77280-78196 [Arabidopsis thalian... 54 1e-06
emb|CAE04875.2| OSJNBa0086O06.23 [Oryza sativa (japonica cultiva... 54 1e-06
ref|NP_565135.1| zinc-binding family protein [Arabidopsis thaliana] 54 1e-06
gb|AAM61222.1| unknown [Arabidopsis thaliana] 53 2e-06
ref|NP_564406.1| zinc-binding family protein [Arabidopsis thaliana] 52 4e-06
>ref|XP_464350.1| putative zinc-binding protein [Oryza sativa (japonica
cultivar-group)] gi|49387527|dbj|BAD25060.1| putative
zinc-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 232
Score = 72.4 bits (176), Expect = 3e-12
Identities = 31/69 (44%), Positives = 41/69 (58%), Gaps = 1/69 (1%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDCS 67
C H + NEKN C+DC C HC AH +HR Q+ RY Y DV R +L+K DCS
Sbjct: 19 CSFHEHAKKNEKNICCLDCCTSICPHCVAAHRVHRLLQVRRYVYHDVVRLEDLEKLIDCS 78
Query: 68 NIQ-VTLNA 75
++Q T+N+
Sbjct: 79 SVQSYTINS 87
>dbj|BAB69816.1| zinc-binding protein [Pisum sativum]
Length = 233
Score = 72.4 bits (176), Expect = 3e-12
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 6 GYCDDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFD 65
G C H++ R NEKN FC+ C + C HC +H+ H Q+ RY Y +V R +L+K D
Sbjct: 29 GDCGVHKNRRKNEKNIFCLHCCLSICPHCLSSHTSHPLLQVRRYVYHNVIRLDDLEKLID 88
Query: 66 CSNIQ-VTLNA 75
CSNIQ T+N+
Sbjct: 89 CSNIQPYTINS 99
>gb|AAW39002.1| At3g60670 [Arabidopsis thaliana] gi|56121894|gb|AAV74228.1|
At3g60670 [Arabidopsis thaliana]
gi|7329677|emb|CAB82671.1| putative protein
[Arabidopsis thaliana] gi|15232396|ref|NP_191626.1|
zinc-binding protein, putative [Arabidopsis thaliana]
gi|11280631|pir||T47878 hypothetical protein T4C21.80 -
Arabidopsis thaliana
Length = 245
Score = 71.6 bits (174), Expect = 5e-12
Identities = 31/63 (49%), Positives = 38/63 (60%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDCS 67
C DH D + NEKN C+DC + C HC +H+ HR QI RY Y+DV R + K DCS
Sbjct: 22 CLDHEDDKKNEKNILCIDCCLTICPHCLSSHTSHRLLQIRRYVYRDVLRVEDGSKLMDCS 81
Query: 68 NIQ 70
IQ
Sbjct: 82 LIQ 84
>dbj|BAD45399.1| putative zinc-binding protein [Oryza sativa (japonica
cultivar-group)] gi|52076518|dbj|BAD45396.1| putative
zinc-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 261
Score = 64.7 bits (156), Expect = 6e-10
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDCS 67
C H + NEKN FC+ C C HC +H H Q+ RY Y DV R +L K DCS
Sbjct: 20 CPAHESRKKNEKNIFCLGCCASICPHCAPSHRHHPLLQVRRYVYNDVVRLDDLDKLIDCS 79
Query: 68 NIQ-VTLNA 75
+Q T+N+
Sbjct: 80 FVQPYTINS 88
>gb|AAF98180.1| F17F8.4 [Arabidopsis thaliana]
Length = 241
Score = 64.7 bits (156), Expect = 6e-10
Identities = 28/63 (44%), Positives = 36/63 (56%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDCS 67
C H R +EKN FC+ C + C HC +H H Q+ RY Y DV R S+L+K DCS
Sbjct: 34 CGIHETRRKSEKNVFCLLCCLSVCPHCLPSHRSHPLLQVRRYVYHDVVRLSDLEKLIDCS 93
Query: 68 NIQ 70
+Q
Sbjct: 94 YVQ 96
>ref|XP_464305.1| putative zinc-binding protein [Oryza sativa (japonica
cultivar-group)] gi|49388965|dbj|BAD26182.1| putative
zinc-binding protein [Oryza sativa (japonica
cultivar-group)] gi|49387579|dbj|BAD25510.1| putative
zinc-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 241
Score = 63.9 bits (154), Expect = 1e-09
Identities = 28/69 (40%), Positives = 38/69 (54%), Gaps = 1/69 (1%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDCS 67
C H + NEKN FC+ C C HC +H H Q+ RY Y DV R +L+K +CS
Sbjct: 20 CPAHESRKKNEKNIFCLACCTSICPHCAPSHRHHPLLQVRRYVYNDVVRLGDLEKLIECS 79
Query: 68 NIQ-VTLNA 75
+Q T+N+
Sbjct: 80 YVQPYTINS 88
>ref|NP_174999.1| zinc-binding family protein [Arabidopsis thaliana]
gi|12323060|gb|AAG51520.1| hypothetical protein
[Arabidopsis thaliana]
Length = 216
Score = 58.2 bits (139), Expect = 5e-08
Identities = 30/64 (46%), Positives = 35/64 (53%), Gaps = 1/64 (1%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVR-FCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDC 66
C H +E N FC+DC+ FC C H HR QI R SY +V R SE+QKH D
Sbjct: 24 CSIHSQSSKSECNLFCLDCSGNAFCSSCLAHHRTHRVIQIRRSSYHNVVRVSEIQKHIDI 83
Query: 67 SNIQ 70
S IQ
Sbjct: 84 SCIQ 87
>ref|XP_467165.1| putative zinc-binding protein [Oryza sativa (japonica
cultivar-group)] gi|49388501|dbj|BAD25625.1| putative
zinc-binding protein [Oryza sativa (japonica
cultivar-group)]
Length = 226
Score = 58.2 bits (139), Expect = 5e-08
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVRFCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDCS 67
C H R N+KN FCVDCA CRHC + H QI++Y+ V R +L K FDC+
Sbjct: 25 CGAHPGERKNDKNHFCVDCAAALCRHCLPHDASHGVLQIWKYASCFVVRVDDL-KLFDCN 83
Query: 68 NIQ 70
IQ
Sbjct: 84 GIQ 86
>gb|AAM61414.1| unknown [Arabidopsis thaliana]
Length = 246
Score = 57.4 bits (137), Expect = 9e-08
Identities = 29/64 (45%), Positives = 36/64 (55%), Gaps = 1/64 (1%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVR-FCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDC 66
C H D NE N FC+DCA FC +C H HR QI R SY +V R +E+QK D
Sbjct: 31 CSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVVQIRRSSYHNVVRVNEIQKFIDI 90
Query: 67 SNIQ 70
+ +Q
Sbjct: 91 ACVQ 94
>gb|AAM91057.1| At1g21000/F9H16_1 [Arabidopsis thaliana]
gi|14030627|gb|AAK52988.1| At1g21000/F9H16_1
[Arabidopsis thaliana] gi|18394936|ref|NP_564128.1|
zinc-binding family protein [Arabidopsis thaliana]
gi|16226407|gb|AAL16160.1| At1g21000/F9H16_1
[Arabidopsis thaliana]
Length = 246
Score = 57.4 bits (137), Expect = 9e-08
Identities = 29/64 (45%), Positives = 36/64 (55%), Gaps = 1/64 (1%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVR-FCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDC 66
C H D NE N FC+DCA FC +C H HR QI R SY +V R +E+QK D
Sbjct: 31 CSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVVQIRRSSYHNVVRVNEIQKFIDI 90
Query: 67 SNIQ 70
+ +Q
Sbjct: 91 ACVQ 94
>gb|AAK43934.1| Unknown protein [Arabidopsis thaliana] gi|25337907|pir||A86343
hypothetical protein F9H16.1 - Arabidopsis thaliana
gi|4836888|gb|AAD30591.1| Unknown protein [Arabidopsis
thaliana]
Length = 243
Score = 57.4 bits (137), Expect = 9e-08
Identities = 29/64 (45%), Positives = 36/64 (55%), Gaps = 1/64 (1%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVR-FCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDC 66
C H D NE N FC+DCA FC +C H HR QI R SY +V R +E+QK D
Sbjct: 28 CSIHVDSNKNECNLFCLDCAGNAFCSYCLVKHKDHRVVQIRRSSYHNVVRVNEIQKFIDI 87
Query: 67 SNIQ 70
+ +Q
Sbjct: 88 ACVQ 91
>ref|XP_463288.1| B1108H10.20 [Oryza sativa (japonica cultivar-group)]
Length = 226
Score = 56.2 bits (134), Expect = 2e-07
Identities = 29/67 (43%), Positives = 37/67 (54%), Gaps = 4/67 (5%)
Query: 8 CDDHRDLRSNEKNTFCVDCAV---RFCRHCKEAH-SIHRRFQIYRYSYQDVFRHSELQKH 63
C H + NE N FC+DC FC +C+ H S HR QI R SY DV + SEL+
Sbjct: 22 CTSHHNSPRNECNLFCIDCQAPEAAFCYYCRSCHHSSHRVIQIRRSSYHDVVKVSELEDI 81
Query: 64 FDCSNIQ 70
D S++Q
Sbjct: 82 LDISDVQ 88
>dbj|BAD73580.1| zinc-binding protein-like [Oryza sativa (japonica
cultivar-group)]
Length = 236
Score = 56.2 bits (134), Expect = 2e-07
Identities = 29/67 (43%), Positives = 37/67 (54%), Gaps = 4/67 (5%)
Query: 8 CDDHRDLRSNEKNTFCVDCAV---RFCRHCKEAH-SIHRRFQIYRYSYQDVFRHSELQKH 63
C H + NE N FC+DC FC +C+ H S HR QI R SY DV + SEL+
Sbjct: 22 CTSHHNSPRNECNLFCIDCQAPEAAFCYYCRSCHHSSHRVIQIRRSSYHDVVKVSELEDI 81
Query: 64 FDCSNIQ 70
D S++Q
Sbjct: 82 LDISDVQ 88
>emb|CAB78792.1| putative protein [Arabidopsis thaliana] gi|2894599|emb|CAA17133.1|
putative protein [Arabidopsis thaliana]
gi|7460098|pir||T05076 hypothetical protein T6K21.80 -
Arabidopsis thaliana
Length = 254
Score = 54.3 bits (129), Expect = 8e-07
Identities = 27/65 (41%), Positives = 34/65 (51%), Gaps = 1/65 (1%)
Query: 7 YCDDHRDLRSNEKNTFCVDCAVR-FCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFD 65
+C H D +E N +C+DC C C H HR QI R SY DV R +E+QK+ D
Sbjct: 48 HCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHHKDHRTIQIRRSSYHDVIRVNEIQKYLD 107
Query: 66 CSNIQ 70
IQ
Sbjct: 108 IGGIQ 112
>ref|NP_193524.2| zinc-binding family protein [Arabidopsis thaliana]
Length = 227
Score = 54.3 bits (129), Expect = 8e-07
Identities = 27/65 (41%), Positives = 34/65 (51%), Gaps = 1/65 (1%)
Query: 7 YCDDHRDLRSNEKNTFCVDCAVR-FCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFD 65
+C H D +E N +C+DC C C H HR QI R SY DV R +E+QK+ D
Sbjct: 48 HCKFHGDSHKSECNMYCLDCTNGPLCSLCLAHHKDHRTIQIRRSSYHDVIRVNEIQKYLD 107
Query: 66 CSNIQ 70
IQ
Sbjct: 108 IGGIQ 112
>gb|AAG51950.1| unknown protein; 77280-78196 [Arabidopsis thaliana]
gi|25337904|pir||A96794 unknown protein F14G6.19
[imported] - Arabidopsis thaliana
Length = 242
Score = 53.9 bits (128), Expect = 1e-06
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVR-FCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDC 66
C H +E N FC+DC+ FC +C H HR QI R SY +V R +E+QK+ D
Sbjct: 30 CSIHAASNKSECNMFCLDCSSEAFCSYCLLNHRNHRVLQIRRSSYHNVVRVNEIQKYIDI 89
Query: 67 SNIQ 70
S +Q
Sbjct: 90 SCVQ 93
>emb|CAE04875.2| OSJNBa0086O06.23 [Oryza sativa (japonica cultivar-group)]
gi|58532113|emb|CAH68537.2| OSJNBa0009P12.2 [Oryza
sativa (japonica cultivar-group)]
gi|50928391|ref|XP_473723.1| OSJNBa0086O06.23 [Oryza
sativa (japonica cultivar-group)]
Length = 239
Score = 53.9 bits (128), Expect = 1e-06
Identities = 27/66 (40%), Positives = 33/66 (49%), Gaps = 1/66 (1%)
Query: 6 GYCDDHRDLRSNEKNTFCVDCAV-RFCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHF 64
G C H D +E N +C+DC C C H H QI R SY DV R SE+QK
Sbjct: 37 GQCKLHADSHKSECNMYCLDCMNGALCSQCLSYHRDHHAIQIRRSSYHDVIRVSEIQKVL 96
Query: 65 DCSNIQ 70
D + +Q
Sbjct: 97 DITGVQ 102
>ref|NP_565135.1| zinc-binding family protein [Arabidopsis thaliana]
Length = 245
Score = 53.9 bits (128), Expect = 1e-06
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVR-FCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDC 66
C H +E N FC+DC+ FC +C H HR QI R SY +V R +E+QK+ D
Sbjct: 33 CSIHAASNKSECNMFCLDCSSEAFCSYCLLNHRNHRVLQIRRSSYHNVVRVNEIQKYIDI 92
Query: 67 SNIQ 70
S +Q
Sbjct: 93 SCVQ 96
>gb|AAM61222.1| unknown [Arabidopsis thaliana]
Length = 241
Score = 52.8 bits (125), Expect = 2e-06
Identities = 27/64 (42%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVR-FCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDC 66
C H +E N FC+DC+ FC +C H HR QI R SY +V R +E+QK D
Sbjct: 29 CSIHAASNKSECNMFCLDCSSEAFCSYCLLNHRNHRVLQIRRSSYHNVVRVNEIQKFIDI 88
Query: 67 SNIQ 70
S +Q
Sbjct: 89 SCVQ 92
>ref|NP_564406.1| zinc-binding family protein [Arabidopsis thaliana]
Length = 213
Score = 52.0 bits (123), Expect = 4e-06
Identities = 26/64 (40%), Positives = 32/64 (49%), Gaps = 1/64 (1%)
Query: 8 CDDHRDLRSNEKNTFCVDCAVR-FCRHCKEAHSIHRRFQIYRYSYQDVFRHSELQKHFDC 66
C H D +E N +C+DC C C H H QI R SY DV R SE+QK D
Sbjct: 27 CKLHADSHKSECNMYCLDCTNGPLCSLCLSFHKDHHAIQIRRSSYHDVIRVSEIQKFLDI 86
Query: 67 SNIQ 70
+ +Q
Sbjct: 87 TGVQ 90
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.329 0.137 0.437
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 133,224,913
Number of Sequences: 2540612
Number of extensions: 4380625
Number of successful extensions: 14581
Number of sequences better than 10.0: 53
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 24
Number of HSP's that attempted gapping in prelim test: 14521
Number of HSP's gapped (non-prelim): 64
length of query: 85
length of database: 863,360,394
effective HSP length: 61
effective length of query: 24
effective length of database: 708,383,062
effective search space: 17001193488
effective search space used: 17001193488
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC142094.3