BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141863.8 - phase: 0
(271 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O24361|PSB5_SPIOL Proteasome subunit beta type 5 precursor (2... 459 e-128
gb|AAM62897.1| 26S proteasome beta subunit, putative [Arabidopsi... 456 e-127
gb|AAK92808.1| putative proteasome epsilon chain precursor [Arab... 448 e-125
emb|CAA74029.1| multicatalytic endopeptidase complex, proteasome... 447 e-124
emb|CAA09603.1| 20S proteasome beta subunit [Cicer arietinum] 444 e-123
gb|AAU82107.1| 20S proteasome beta 5 subunit [Triticum aestivum] 411 e-113
dbj|BAD69286.1| beta 5 subunit of 20S proteasome [Oryza sativa (... 400 e-110
dbj|BAA96838.1| beta 5 subunit of 20S proteasome [Oryza sativa (... 398 e-110
gb|AAL26914.1| putative 20S proteasome beta subunit 5 [Prunus pe... 381 e-104
emb|CAC43326.1| putative beta5 proteasome subunit [Nicotiana tab... 342 7e-93
gb|AAS01050.1| putative proteasome 20S beta5 subunit [Brassica n... 293 3e-78
gb|AAM18885.1| unknown [Branchiostoma floridae] 291 1e-77
emb|CAA66312.1| LMP7-like protein [Geodia cydonium] gi|2133439|p... 289 7e-77
gb|AAP35423.1| proteasome (prosome, macropain) subunit, beta typ... 288 1e-76
emb|CAA64838.1| proteasome [Homo sapiens] gi|55730230|emb|CAH918... 288 1e-76
gb|AAP36588.1| Homo sapiens proteasome (prosome, macropain) subu... 288 1e-76
emb|CAD97956.1| hypothetical protein [Homo sapiens] 288 1e-76
ref|XP_537370.1| PREDICTED: similar to proteasome beta 5 subunit... 287 2e-76
ref|NP_035316.1| proteasome (prosome, macropain) subunit, beta t... 286 4e-76
ref|XP_614475.1| PREDICTED: similar to proteasome beta 5 subunit... 286 4e-76
>sp|O24361|PSB5_SPIOL Proteasome subunit beta type 5 precursor (20S proteasome subunit E)
(Proteasome epsilon chain) gi|2285800|dbj|BAA21650.1|
26S proteasome beta subunit [Spinacia oleracea]
Length = 272
Score = 459 bits (1180), Expect = e-128
Identities = 225/269 (83%), Positives = 239/269 (88%)
Query: 2 LDTTALESFPSLISHGINVAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLAFI 61
LDT+ LES + V + PSF LPN DFDGF KE +QMVKPAKGTTTLAFI
Sbjct: 3 LDTSGLESTAPIFRRSDFVFDGLQMTPSFDLPNPTDFDGFQKEAVQMVKPAKGTTTLAFI 62
Query: 62 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 121
FK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE
Sbjct: 63 FKHGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 122
Query: 122 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFS 181
LANKRRISVTGASKLLANILY+YRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG RFS
Sbjct: 123 LANKRRISVTGASKLLANILYNYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGMRFS 182
Query: 182 VGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKL 241
VGSGSPYAYGVLD+GYKYDM+VEEASELARRAIYHAT+RDGASGGV SVY+VGP GWKK+
Sbjct: 183 VGSGSPYAYGVLDNGYKYDMTVEEASELARRAIYHATYRDGASGGVVSVYHVGPDGWKKV 242
Query: 242 SGDDVGELHYHYNPVTPSTVEQEMVEAAG 270
+GDDVG+LH+ Y PV P+TVEQEMVE G
Sbjct: 243 TGDDVGDLHFQYYPVVPATVEQEMVEVVG 271
>gb|AAM62897.1| 26S proteasome beta subunit, putative [Arabidopsis thaliana]
gi|21928101|gb|AAM78079.1| AT3g26340/F20C19_6
[Arabidopsis thaliana] gi|9294292|dbj|BAB02194.1|
proteasome epsilon chain precursor [Arabidopsis
thaliana] gi|16612308|gb|AAL27514.1| AT3g26340/F20C19_6
[Arabidopsis thaliana] gi|15231544|ref|NP_189265.1| 20S
proteasome beta subunit E, putative [Arabidopsis
thaliana]
Length = 273
Score = 456 bits (1172), Expect = e-127
Identities = 226/270 (83%), Positives = 242/270 (88%), Gaps = 2/270 (0%)
Query: 2 LDTTALESFPSLISHGIN--VAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLA 59
LDT+ LE+ +I G N + S+ PSF LP + DFDGF K+ ++MVKPAKGTTTLA
Sbjct: 3 LDTSGLETTMPVIGFGSNSEMLDGFSSAPSFDLPRTTDFDGFQKKAVEMVKPAKGTTTLA 62
Query: 60 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 119
FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 63 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 122
Query: 120 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNR 179
HELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG+R
Sbjct: 123 HELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDR 182
Query: 180 FSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWK 239
FSVGSGSPYAYGVLDSGYK+DMSVEEASELARR+IYHATFRDGASGGVASVY+VGP GW
Sbjct: 183 FSVGSGSPYAYGVLDSGYKFDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPQGWT 242
Query: 240 KLSGDDVGELHYHYNPVTPSTVEQEMVEAA 269
KLSGDDVGELHYHY PV P T E M EAA
Sbjct: 243 KLSGDDVGELHYHYYPVAPITAEHVMEEAA 272
>gb|AAK92808.1| putative proteasome epsilon chain precursor [Arabidopsis thaliana]
Length = 274
Score = 448 bits (1152), Expect = e-125
Identities = 223/269 (82%), Positives = 240/269 (88%), Gaps = 2/269 (0%)
Query: 2 LDTTALESFPSLISHGIN--VAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLA 59
LDT+ E+ +I G + V E+S+ PSF LP + +FDGF K+ M+K AKGTTTLA
Sbjct: 3 LDTSGFETSMPMIGFGSSSDVLDELSSVPSFDLPRTKEFDGFQKKAKDMLKHAKGTTTLA 62
Query: 60 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 119
FIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 63 FIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 122
Query: 120 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNR 179
HELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG+R
Sbjct: 123 HELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDR 182
Query: 180 FSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWK 239
FSVGSGSPYAYGVLDSGYKYDMSVEEASELARR+IYHATFRDGASGGVASVY+VGP GW
Sbjct: 183 FSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEGWT 242
Query: 240 KLSGDDVGELHYHYNPVTPSTVEQEMVEA 268
KLSGDDVGELHYHY PV P+T EQ M EA
Sbjct: 243 KLSGDDVGELHYHYYPVAPATAEQVMEEA 271
>emb|CAA74029.1| multicatalytic endopeptidase complex, proteasome precursor, beta
subunit [Arabidopsis thaliana]
gi|13194776|gb|AAK15550.1| putative proteasome epsilon
chain precursor [Arabidopsis thaliana]
gi|23297641|gb|AAN12998.1| proteasome epsilon chain
precursor [Arabidopsis thaliana]
gi|15222152|ref|NP_172765.1| 20S proteasome beta subunit
E1 (PBE1) (PRCE) [Arabidopsis thaliana]
gi|4850389|gb|AAD31059.1| Identical to gb|Y13695
multicatalytic endopeptidase complex, proteasome
precursor, beta subunit (prce) from Arabidopsis
thaliana. ESTs gb|Y09360, gb|F13852, gb|T20555,
gb|T44620, gb|AI099779 and gb|AA586183 come from this
gene gi|3421117|gb|AAC32072.1| 20S proteasome beta
subunit PBE1 [Arabidopsis thaliana]
gi|25290068|pir||F86264 proteasome endopeptidase complex
(EC 3.4.25.1) beta chain type 5 precursor - Arabidopsis
thaliana gi|3914425|sp|O23717|PSB5_ARATH Proteasome
subunit beta type 5 precursor (20S proteasome subunit E)
(Proteasome epsilon chain)
Length = 274
Score = 447 bits (1149), Expect = e-124
Identities = 222/269 (82%), Positives = 240/269 (88%), Gaps = 2/269 (0%)
Query: 2 LDTTALESFPSLISHGIN--VAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLA 59
LDT+ E+ +I G + + E+S+ PSF LP + +FDGF K+ M+K AKGTTTLA
Sbjct: 3 LDTSGFETSMPMIGFGSSSDMLDELSSVPSFDLPRTKEFDGFQKKAKDMLKHAKGTTTLA 62
Query: 60 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 119
FIFK GVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL
Sbjct: 63 FIFKGGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 122
Query: 120 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNR 179
HELANKRRISV+GASKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG+R
Sbjct: 123 HELANKRRISVSGASKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDR 182
Query: 180 FSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWK 239
FSVGSGSPYAYGVLDSGYKYDMSVEEASELARR+IYHATFRDGASGGVASVY+VGP GW
Sbjct: 183 FSVGSGSPYAYGVLDSGYKYDMSVEEASELARRSIYHATFRDGASGGVASVYHVGPEGWT 242
Query: 240 KLSGDDVGELHYHYNPVTPSTVEQEMVEA 268
KLSGDDVGELHYHY PV P+T EQ M EA
Sbjct: 243 KLSGDDVGELHYHYYPVAPATAEQVMEEA 271
>emb|CAA09603.1| 20S proteasome beta subunit [Cicer arietinum]
Length = 238
Score = 444 bits (1142), Expect = e-123
Identities = 223/270 (82%), Positives = 228/270 (83%), Gaps = 34/270 (12%)
Query: 2 LDTTALESFPSLISHGINVAGEISAPPSFQLPNSNDFDGFVKETIQMVKPAKGTTTLAFI 61
LDT+ LESFPSLISHG +V GE APPSF+LPNSNDFDGF+KE IQMVKPAKGTTTLAFI
Sbjct: 3 LDTSGLESFPSLISHGNDVVGEFEAPPSFELPNSNDFDGFLKEAIQMVKPAKGTTTLAFI 62
Query: 62 FKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHE 121
FKEGVMVAAD CQFWHRNLGIKCRLHE
Sbjct: 63 FKEGVMVAAD----------------------------------CQFWHRNLGIKCRLHE 88
Query: 122 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFS 181
LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG RFS
Sbjct: 89 LANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGTRFS 148
Query: 182 VGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKL 241
VGSGSPYAYGVLDSGYKYDMS+EEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKL
Sbjct: 149 VGSGSPYAYGVLDSGYKYDMSIEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKL 208
Query: 242 SGDDVGELHYHYNPVTPSTVEQEMVEAAGP 271
SGDDVGELHYHYNPVTPSTVEQEMVEA GP
Sbjct: 209 SGDDVGELHYHYNPVTPSTVEQEMVEATGP 238
>gb|AAU82107.1| 20S proteasome beta 5 subunit [Triticum aestivum]
Length = 279
Score = 411 bits (1056), Expect = e-113
Identities = 207/269 (76%), Positives = 230/269 (84%), Gaps = 5/269 (1%)
Query: 5 TALES-FPSLISHGINVAGEISAPPSFQL----PNSNDFDGFVKETIQMVKPAKGTTTLA 59
+ALE+ F + + + AG SA + QL P NDFDGF K T +MV KGTTTL+
Sbjct: 6 SALENHFGAAAAGSDDFAGLFSADAADQLALEFPTCNDFDGFQKATKEMVNNKKGTTTLS 65
Query: 60 FIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRL 119
FIF +GV+VAADSRASMGGYISSQ+V+KIIEINPYMLGTMAGGAADCQFWHRNLG+KCRL
Sbjct: 66 FIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGVKCRL 125
Query: 120 HELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNR 179
HELANKRRIS+ G+SK LANILYSYRGMGLS+GTMIAG+DETGPGLYYVDSEG RLKG+R
Sbjct: 126 HELANKRRISIAGSSKTLANILYSYRGMGLSIGTMIAGFDETGPGLYYVDSEGARLKGSR 185
Query: 180 FSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWK 239
FSVGSGS YAYG+LD GYK++MSVEEA+ELARRAIYHATFRDGASGG SVYYVGP GWK
Sbjct: 186 FSVGSGSLYAYGILDEGYKFNMSVEEAAELARRAIYHATFRDGASGGCVSVYYVGPDGWK 245
Query: 240 KLSGDDVGELHYHYNPVTPSTVEQEMVEA 268
KLSGDDVGELHYHY PV + VEQEM EA
Sbjct: 246 KLSGDDVGELHYHYYPVQAAPVEQEMAEA 274
>dbj|BAD69286.1| beta 5 subunit of 20S proteasome [Oryza sativa (japonica
cultivar-group)]
Length = 277
Score = 400 bits (1027), Expect = e-110
Identities = 204/272 (75%), Positives = 227/272 (83%), Gaps = 5/272 (1%)
Query: 2 LDTTALES-FPSLISHGINVAGEISAP---PSFQLPNSN-DFDGFVKETIQMVKPAKGTT 56
LD +A+E+ F + + G + G A P+ +LP DFDGF KET +M+K KGTT
Sbjct: 3 LDVSAMENNFAAHAAGGEDDGGLFGAGADLPAMELPTCPADFDGFQKETKEMLKHKKGTT 62
Query: 57 TLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIK 116
TLAFIF +GV+VAADSRASMGGYISSQ+V+KIIEINPYMLGTMAGGAADCQFWHRNLGIK
Sbjct: 63 TLAFIFDKGVIVAADSRASMGGYISSQTVRKIIEINPYMLGTMAGGAADCQFWHRNLGIK 122
Query: 117 CRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLK 176
CRLHELANKRRIS+ GASKLLANILYSYRGMGLS+GTMIAGWDE GPGLYYVDSEG RL
Sbjct: 123 CRLHELANKRRISIAGASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSEGARLM 182
Query: 177 GNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPT 236
G+RFSVGSGS YAYG+LD GY+Y M VEEA+ELARRAIY ATFRDGASGG SVY+VGP
Sbjct: 183 GSRFSVGSGSLYAYGILDEGYRYVMPVEEAAELARRAIYQATFRDGASGGCVSVYHVGPN 242
Query: 237 GWKKLSGDDVGELHYHYNPVTPSTVEQEMVEA 268
GW KLSGDDVGELHY Y PV + VEQEM +A
Sbjct: 243 GWTKLSGDDVGELHYKYYPVEATPVEQEMADA 274
>dbj|BAA96838.1| beta 5 subunit of 20S proteasome [Oryza sativa (japonica
cultivar-group)]
Length = 277
Score = 398 bits (1023), Expect = e-110
Identities = 196/242 (80%), Positives = 213/242 (87%), Gaps = 1/242 (0%)
Query: 28 PSFQLPNSN-DFDGFVKETIQMVKPAKGTTTLAFIFKEGVMVAADSRASMGGYISSQSVK 86
P+ +LP DFDGF KET +M+K KGTTTLAFIF +GV+VAADSRASMGGYISSQ+V+
Sbjct: 33 PAMELPTCPADFDGFQKETKEMLKHKKGTTTLAFIFDKGVIVAADSRASMGGYISSQTVR 92
Query: 87 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLLANILYSYRG 146
KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRIS+ GASKLLANILYSYRG
Sbjct: 93 KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISIAGASKLLANILYSYRG 152
Query: 147 MGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEA 206
MGLS+GTMIAGWDE GPGLYYVDSEG RL G+RFSVGSGS YAYG+LD GY+Y M VEEA
Sbjct: 153 MGLSIGTMIAGWDEKGPGLYYVDSEGARLMGSRFSVGSGSLYAYGILDEGYRYVMPVEEA 212
Query: 207 SELARRAIYHATFRDGASGGVASVYYVGPTGWKKLSGDDVGELHYHYNPVTPSTVEQEMV 266
+ELARRAIY ATFRDGASGG SVY+VGP GW KLSGDDVGELHY Y PV + VEQEM
Sbjct: 213 AELARRAIYQATFRDGASGGCVSVYHVGPNGWTKLSGDDVGELHYKYYPVEATPVEQEMA 272
Query: 267 EA 268
+A
Sbjct: 273 DA 274
>gb|AAL26914.1| putative 20S proteasome beta subunit 5 [Prunus persica]
Length = 201
Score = 381 bits (978), Expect = e-104
Identities = 185/199 (92%), Positives = 190/199 (94%)
Query: 71 DSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV 130
+SRASMGGYISSQSV+KIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV
Sbjct: 1 NSRASMGGYISSQSVEKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISV 60
Query: 131 TGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFSVGSGSPYAY 190
TGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKG RFSVGSGSPYAY
Sbjct: 61 TGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGMRFSVGSGSPYAY 120
Query: 191 GVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKLSGDDVGELH 250
GVLD GY+YDMSVEEA+ELARRAIYHATFRDGASGGVASVY+VGP GWKKLSGDDVGELH
Sbjct: 121 GVLDDGYRYDMSVEEAAELARRAIYHATFRDGASGGVASVYHVGPNGWKKLSGDDVGELH 180
Query: 251 YHYNPVTPSTVEQEMVEAA 269
YHY PV VEQEMVE A
Sbjct: 181 YHYYPVVEGAVEQEMVEVA 199
>emb|CAC43326.1| putative beta5 proteasome subunit [Nicotiana tabacum]
Length = 174
Score = 342 bits (877), Expect = 7e-93
Identities = 165/174 (94%), Positives = 170/174 (96%)
Query: 74 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 133
ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRR SV GA
Sbjct: 1 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRTSVAGA 60
Query: 134 SKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVL 193
SKLLANILYSYRGMGLSVGTMIAGWDE GPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVL
Sbjct: 61 SKLLANILYSYRGMGLSVGTMIAGWDEKGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVL 120
Query: 194 DSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKLSGDDVG 247
DSGY++D+SVEEA+ELARRAIYHATFRDGASGGVASVY+VGP GWKKLSGDDVG
Sbjct: 121 DSGYRFDLSVEEAAELARRAIYHATFRDGASGGVASVYHVGPNGWKKLSGDDVG 174
>gb|AAS01050.1| putative proteasome 20S beta5 subunit [Brassica napus]
Length = 150
Score = 293 bits (751), Expect = 3e-78
Identities = 143/150 (95%), Positives = 149/150 (99%)
Query: 74 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGA 133
ASMGGYISSQSVKKIIEINPYMLGTMAGGAAD QFWHRNLGIKCRLHELANKRRISV+GA
Sbjct: 1 ASMGGYISSQSVKKIIEINPYMLGTMAGGAADRQFWHRNLGIKCRLHELANKRRISVSGA 60
Query: 134 SKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVL 193
SKLLAN+LYSYRGMGLSVGTMIAGWDETGPGLYYVD+EGGRLKG+RFSVGSGSPYAYGVL
Sbjct: 61 SKLLANMLYSYRGMGLSVGTMIAGWDETGPGLYYVDNEGGRLKGDRFSVGSGSPYAYGVL 120
Query: 194 DSGYKYDMSVEEASELARRAIYHATFRDGA 223
DSGYK+DMSVEEASELARR+IYHATFRDGA
Sbjct: 121 DSGYKFDMSVEEASELARRSIYHATFRDGA 150
>gb|AAM18885.1| unknown [Branchiostoma floridae]
Length = 275
Score = 291 bits (746), Expect = 1e-77
Identities = 140/200 (70%), Positives = 164/200 (82%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTTTLAF F+ GV+VA DSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 71 GTTTLAFKFQHGVIVAVDSRATAGSYIASQTVKKVIEINPYLLGTMAGGAADCSFWERVL 130
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+CR++EL NK RISV ASKLLANI+Y+Y+GMGLS+GTMI GWD+ GPGLYYVDS+G
Sbjct: 131 AEQCRIYELRNKERISVAAASKLLANIVYNYKGMGLSMGTMIVGWDKRGPGLYYVDSDGT 190
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233
RL N FSVGSGS YAYGVLDSGY +DM VEEA EL +RAIYHAT RD SGGV ++Y++
Sbjct: 191 RLSNNMFSVGSGSTYAYGVLDSGYSWDMGVEEAYELGKRAIYHATHRDAYSGGVVNLYHM 250
Query: 234 GPTGWKKLSGDDVGELHYHY 253
TGW K+S DV +LHY Y
Sbjct: 251 KETGWIKVSQTDVMDLHYKY 270
>emb|CAA66312.1| LMP7-like protein [Geodia cydonium] gi|2133439|pir||JC5073
proteasome epsilon chain precursor - Geodia cydonium
Length = 280
Score = 289 bits (739), Expect = 7e-77
Identities = 143/236 (60%), Positives = 178/236 (74%), Gaps = 5/236 (2%)
Query: 23 EISAPPSFQLPNSNDFDGFVK-----ETIQMVKPAKGTTTLAFIFKEGVMVAADSRASMG 77
E + P SF +P + F++ E ++ A GTTTLAF F+ GV+VA DSRA+ G
Sbjct: 38 ESATPRSFAVPPGIEPVEFLQRFSSDEGGVKIEFAHGTTTLAFKFQHGVIVAVDSRATAG 97
Query: 78 GYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNLGIKCRLHELANKRRISVTGASKLL 137
+I+SQ+VKK+IEINPY+LGTMAGGAADC +W R L CR++EL NK RISV ASK+L
Sbjct: 98 SWIASQTVKKVIEINPYLLGTMAGGAADCAYWERQLAFSCRVYELRNKERISVAAASKIL 157
Query: 138 ANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGGRLKGNRFSVGSGSPYAYGVLDSGY 197
+N++Y Y+GMGLS+GTMI GWD+ GPGLYYVDS+G RL + FSVGSGS YAYGVLDSGY
Sbjct: 158 SNMVYRYKGMGLSMGTMICGWDKKGPGLYYVDSDGSRLTHHMFSVGSGSTYAYGVLDSGY 217
Query: 198 KYDMSVEEASELARRAIYHATFRDGASGGVASVYYVGPTGWKKLSGDDVGELHYHY 253
YD+SVEEA +L +RAIYHAT RD SGGV ++Y++ TGW K+S DV ELHY Y
Sbjct: 218 SYDLSVEEARDLGKRAIYHATHRDAYSGGVVNLYHMMETGWVKVSQTDVKELHYQY 273
>gb|AAP35423.1| proteasome (prosome, macropain) subunit, beta type, 5 [Homo
sapiens] gi|1172607|sp|P28074|PSB5_HUMAN Proteasome
subunit beta type 5 precursor (Proteasome epsilon chain)
(Macropain epsilon chain) (Multicatalytic endopeptidase
complex epsilon chain) (Proteasome subunit X)
(Proteasome chain 6) (Proteasome subunit MB1)
gi|558526|dbj|BAA06097.1| proteasome subunit X [Homo
sapiens]
Length = 208
Score = 288 bits (736), Expect = 1e-76
Identities = 136/205 (66%), Positives = 165/205 (80%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 4 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 63
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 64 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 123
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233
R+ G FSVGSGS YAYGV+D GY YD+ VE+A +LARRAIY AT+RD SGG ++Y+V
Sbjct: 124 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 183
Query: 234 GPTGWKKLSGDDVGELHYHYNPVTP 258
GW ++S D+V +LH Y+ TP
Sbjct: 184 REDGWIRVSSDNVADLHEKYSGSTP 208
>emb|CAA64838.1| proteasome [Homo sapiens] gi|55730230|emb|CAH91838.1| hypothetical
protein [Pongo pygmaeus] gi|35505516|gb|AAH57840.1|
Proteasome beta 5 subunit [Homo sapiens]
gi|4506201|ref|NP_002788.1| proteasome beta 5 subunit
[Homo sapiens]
Length = 263
Score = 288 bits (736), Expect = 1e-76
Identities = 136/205 (66%), Positives = 165/205 (80%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 178
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233
R+ G FSVGSGS YAYGV+D GY YD+ VE+A +LARRAIY AT+RD SGG ++Y+V
Sbjct: 179 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 238
Query: 234 GPTGWKKLSGDDVGELHYHYNPVTP 258
GW ++S D+V +LH Y+ TP
Sbjct: 239 REDGWIRVSSDNVADLHEKYSGSTP 263
>gb|AAP36588.1| Homo sapiens proteasome (prosome, macropain) subunit, beta type, 5
[synthetic construct]
Length = 209
Score = 288 bits (736), Expect = 1e-76
Identities = 136/205 (66%), Positives = 165/205 (80%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 4 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 63
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 64 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 123
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233
R+ G FSVGSGS YAYGV+D GY YD+ VE+A +LARRAIY AT+RD SGG ++Y+V
Sbjct: 124 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 183
Query: 234 GPTGWKKLSGDDVGELHYHYNPVTP 258
GW ++S D+V +LH Y+ TP
Sbjct: 184 REDGWIRVSSDNVADLHEKYSGSTP 208
>emb|CAD97956.1| hypothetical protein [Homo sapiens]
Length = 266
Score = 288 bits (736), Expect = 1e-76
Identities = 136/205 (66%), Positives = 165/205 (80%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 62 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 121
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 122 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 181
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233
R+ G FSVGSGS YAYGV+D GY YD+ VE+A +LARRAIY AT+RD SGG ++Y+V
Sbjct: 182 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 241
Query: 234 GPTGWKKLSGDDVGELHYHYNPVTP 258
GW ++S D+V +LH Y+ TP
Sbjct: 242 REDGWIRVSSDNVADLHEKYSGSTP 266
>ref|XP_537370.1| PREDICTED: similar to proteasome beta 5 subunit [Canis familiaris]
Length = 270
Score = 287 bits (734), Expect = 2e-76
Identities = 136/205 (66%), Positives = 165/205 (80%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 66 GTTTLAFKFQHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 125
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 126 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 185
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233
R+ G FSVGSGS YAYGV+D GY YD+ VE+A +LARRAIY AT+RD SGG ++Y+V
Sbjct: 186 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEQAYDLARRAIYQATYRDAYSGGAVNLYHV 245
Query: 234 GPTGWKKLSGDDVGELHYHYNPVTP 258
GW ++S D+V +LH Y+ TP
Sbjct: 246 REDGWIRVSSDNVADLHDKYSGSTP 270
>ref|NP_035316.1| proteasome (prosome, macropain) subunit, beta type 5 [Mus musculus]
gi|2897806|dbj|BAA24916.1| PSMB5 [Mus musculus]
gi|5757659|gb|AAD50536.1| proteasome subunit X [Mus
musculus] gi|2897809|dbj|BAA24917.1| PSMB5 [Mus
musculus]
Length = 264
Score = 286 bits (732), Expect = 4e-76
Identities = 136/204 (66%), Positives = 164/204 (79%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTTTLAF F GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFLHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 178
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233
R+ G FSVGSGS YAYGV+D GY YD+ VEEA +LARRAIY AT+RD SGG ++Y+V
Sbjct: 179 RISGTAFSVGSGSVYAYGVMDRGYSYDLKVEEAYDLARRAIYQATYRDAYSGGAVNLYHV 238
Query: 234 GPTGWKKLSGDDVGELHYHYNPVT 257
GW ++S D+V +LH Y+ V+
Sbjct: 239 REDGWIRVSSDNVADLHDKYSSVS 262
>ref|XP_614475.1| PREDICTED: similar to proteasome beta 5 subunit [Bos taurus]
Length = 263
Score = 286 bits (732), Expect = 4e-76
Identities = 137/204 (67%), Positives = 164/204 (80%)
Query: 54 GTTTLAFIFKEGVMVAADSRASMGGYISSQSVKKIIEINPYMLGTMAGGAADCQFWHRNL 113
GTTTLAF F+ GV+VAADSRA+ G YI+SQ+VKK+IEINPY+LGTMAGGAADC FW R L
Sbjct: 59 GTTTLAFKFRHGVIVAADSRATAGAYIASQTVKKVIEINPYLLGTMAGGAADCSFWERLL 118
Query: 114 GIKCRLHELANKRRISVTGASKLLANILYSYRGMGLSVGTMIAGWDETGPGLYYVDSEGG 173
+CR++EL NK RISV ASKLLAN++Y Y+GMGLS+GTMI GWD+ GPGLYYVDSEG
Sbjct: 119 ARQCRIYELRNKERISVAAASKLLANMVYQYKGMGLSMGTMICGWDKRGPGLYYVDSEGN 178
Query: 174 RLKGNRFSVGSGSPYAYGVLDSGYKYDMSVEEASELARRAIYHATFRDGASGGVASVYYV 233
R+ G FSVGSGS YAYGV+D GY YD+ VEEA +LARRAIY AT+RD SGG S+Y+V
Sbjct: 179 RISGATFSVGSGSVYAYGVMDRGYSYDLEVEEAYDLARRAIYQATYRDAYSGGSVSLYHV 238
Query: 234 GPTGWKKLSGDDVGELHYHYNPVT 257
GW ++S D+V +LH Y+ T
Sbjct: 239 REDGWIRVSSDNVADLHDKYSGST 262
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.316 0.135 0.397
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 470,939,024
Number of Sequences: 2540612
Number of extensions: 19834961
Number of successful extensions: 56235
Number of sequences better than 10.0: 1016
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 296
Number of HSP's that attempted gapping in prelim test: 54882
Number of HSP's gapped (non-prelim): 1054
length of query: 271
length of database: 863,360,394
effective HSP length: 126
effective length of query: 145
effective length of database: 543,243,282
effective search space: 78770275890
effective search space used: 78770275890
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 74 (33.1 bits)
Medicago: description of AC141863.8