BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC141106.11 + phase: 0 /pseudo
(333 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_482181.1| membrane protein-like [Oryza sativa (japonica c... 137 6e-31
dbj|BAD29095.1| membrane protein-like [Oryza sativa (japonica cu... 135 1e-30
ref|XP_482165.1| unknown protein [Oryza sativa (japonica cultiva... 134 4e-30
gb|AAM97053.1| unknown protein [Arabidopsis thaliana] gi|2645052... 133 6e-30
gb|AAM15102.1| hypothetical protein [Arabidopsis thaliana] gi|36... 130 5e-29
gb|AAY63998.1| unknown [Brassica napus] 127 4e-28
gb|AAM91463.1| At2g36630/F1O11.26 [Arabidopsis thaliana] gi|1870... 112 2e-23
gb|AAM15316.1| unknown protein [Arabidopsis thaliana] gi|4415908... 112 2e-23
gb|AAC12639.1| hypothetical protein [Mesembryanthemum crystallin... 104 4e-21
gb|AAT77085.1| expressed protein [Oryza sativa (japonica cultiva... 103 7e-21
ref|NP_915724.1| P0415A04.10 [Oryza sativa (japonica cultivar-gr... 77 7e-13
dbj|BAD53257.1| membrane protein-like [Oryza sativa (japonica cu... 77 7e-13
ref|NP_176367.1| expressed protein [Arabidopsis thaliana] gi|450... 74 8e-12
emb|CAA10487.1| hypothetical protein [Arabidopsis thaliana] gi|1... 74 8e-12
ref|NP_915723.1| P0415A04.9 [Oryza sativa (japonica cultivar-gro... 72 2e-11
dbj|BAD53380.1| membrane protein-like [Oryza sativa (japonica cu... 72 2e-11
ref|NP_172621.2| expressed protein [Arabidopsis thaliana] 69 3e-10
gb|AAF16643.1| T23J18.20 [Arabidopsis thaliana] 69 3e-10
emb|CAB79126.1| hypothetical protein [Arabidopsis thaliana] gi|2... 67 1e-09
emb|CAB79125.1| hypothetical protein [Arabidopsis thaliana] gi|2... 65 2e-09
>ref|XP_482181.1| membrane protein-like [Oryza sativa (japonica cultivar-group)]
gi|40253788|dbj|BAD05726.1| membrane protein-like [Oryza
sativa (japonica cultivar-group)]
gi|40253412|dbj|BAD05341.1| membrane protein-like [Oryza
sativa (japonica cultivar-group)]
Length = 465
Score = 137 bits (344), Expect = 6e-31
Identities = 65/90 (72%), Positives = 74/90 (82%)
Query: 1 MITGGAGATVLYNLKKRHPTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTTL 60
MI G A +TV YNLK +HPTLD+PVIDYDLALL QPMLMLGIS+GV FN+IFPDW++T L
Sbjct: 117 MIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVLFNVIFPDWLITVL 176
Query: 61 LIIFFTGISVNAFLKGVNTWKKETLTKKVA 90
LII F G S AFLKGV TWKKET+ K+ A
Sbjct: 177 LIILFLGTSTKAFLKGVETWKKETILKREA 206
>dbj|BAD29095.1| membrane protein-like [Oryza sativa (japonica cultivar-group)]
Length = 481
Score = 135 bits (341), Expect = 1e-30
Identities = 64/90 (71%), Positives = 74/90 (82%)
Query: 1 MITGGAGATVLYNLKKRHPTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTTL 60
MI G A +TV YNLK +HPTLD+PVIDYDLALL QPMLMLGIS+GV FN++FPDW++T L
Sbjct: 133 MIMGAAVSTVYYNLKLKHPTLDMPVIDYDLALLIQPMLMLGISIGVIFNVLFPDWLVTVL 192
Query: 61 LIIFFTGISVNAFLKGVNTWKKETLTKKVA 90
LII F G S AFLKGV TWKKET+ K+ A
Sbjct: 193 LIILFLGTSTKAFLKGVETWKKETIIKREA 222
>ref|XP_482165.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|40253486|dbj|BAD05436.1| unknown protein [Oryza
sativa (japonica cultivar-group)]
Length = 469
Score = 134 bits (337), Expect = 4e-30
Identities = 63/90 (70%), Positives = 74/90 (82%)
Query: 1 MITGGAGATVLYNLKKRHPTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTTL 60
MI G A +TV NLK++HPTLD+PVIDYDLALL QPMLMLGIS+GV FN+IFPDW++T L
Sbjct: 126 MIMGAAVSTVYCNLKRKHPTLDMPVIDYDLALLIQPMLMLGISIGVIFNVIFPDWLVTVL 185
Query: 61 LIIFFTGISVNAFLKGVNTWKKETLTKKVA 90
LII F G S AFLKG+ TWKKET+ K+ A
Sbjct: 186 LIILFLGTSTKAFLKGIETWKKETIIKREA 215
>gb|AAM97053.1| unknown protein [Arabidopsis thaliana] gi|26450521|dbj|BAC42374.1|
unknown protein [Arabidopsis thaliana]
gi|28951043|gb|AAO63445.1| At2g25737 [Arabidopsis
thaliana] gi|25083770|gb|AAN72117.1| unknown protein
[Arabidopsis thaliana] gi|30682879|ref|NP_850068.1|
expressed protein [Arabidopsis thaliana]
Length = 476
Score = 133 bits (335), Expect = 6e-30
Identities = 62/90 (68%), Positives = 73/90 (80%)
Query: 1 MITGGAGATVLYNLKKRHPTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTTL 60
MI G + +TV YNL+ RHPTLD+P+IDYDLALL QPMLMLGIS+GVAFN+IFPDW++T L
Sbjct: 127 MIMGASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFPDWLVTVL 186
Query: 61 LIIFFTGISVNAFLKGVNTWKKETLTKKVA 90
LI+ F G S AFLKG TW KET+ KK A
Sbjct: 187 LIVLFLGTSTKAFLKGSETWNKETIEKKEA 216
>gb|AAM15102.1| hypothetical protein [Arabidopsis thaliana]
gi|3643608|gb|AAC42255.1| hypothetical protein
[Arabidopsis thaliana] gi|25412342|pir||B84652
hypothetical protein At2g25740 [imported] - Arabidopsis
thaliana
Length = 902
Score = 130 bits (327), Expect = 5e-29
Identities = 60/87 (68%), Positives = 71/87 (80%)
Query: 4 GGAGATVLYNLKKRHPTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTTLLII 63
G + +TV YNL+ RHPTLD+P+IDYDLALL QPMLMLGIS+GVAFN+IFPDW++T LLI+
Sbjct: 2 GASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISIGVAFNVIFPDWLVTVLLIV 61
Query: 64 FFTGISVNAFLKGVNTWKKETLTKKVA 90
F G S AFLKG TW KET+ KK A
Sbjct: 62 LFLGTSTKAFLKGSETWNKETIEKKEA 88
>gb|AAY63998.1| unknown [Brassica napus]
Length = 348
Score = 127 bits (320), Expect = 4e-28
Identities = 60/87 (68%), Positives = 70/87 (79%)
Query: 4 GGAGATVLYNLKKRHPTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTTLLII 63
G + +TV YNL+ RHPTLD+P+IDYDLALL QPMLMLGIS+GVAFN++FPDWM+T LLII
Sbjct: 2 GASVSTVYYNLRLRHPTLDMPIIDYDLALLIQPMLMLGISVGVAFNVMFPDWMVTVLLII 61
Query: 64 FFTGISVNAFLKGVNTWKKETLTKKVA 90
F G S AFLKG TW KET+ K A
Sbjct: 62 LFLGTSTKAFLKGRETWNKETIEKMEA 88
>gb|AAM91463.1| At2g36630/F1O11.26 [Arabidopsis thaliana]
gi|18700129|gb|AAL77676.1| At2g36630/F1O11.26
[Arabidopsis thaliana] gi|30686851|ref|NP_850267.1|
expressed protein [Arabidopsis thaliana]
Length = 459
Score = 112 bits (279), Expect = 2e-23
Identities = 47/87 (54%), Positives = 69/87 (79%)
Query: 1 MITGGAGATVLYNLKKRHPTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTTL 60
MI G + ++V YN++ RHPT ++P++DYDLALLFQPML+LGI++GV+ +++FP W++T L
Sbjct: 107 MIMGASASSVWYNVRVRHPTKEVPILDYDLALLFQPMLLLGITVGVSLSVVFPYWLITVL 166
Query: 61 LIIFFTGISVNAFLKGVNTWKKETLTK 87
+II F G S +F KG+ WK+ETL K
Sbjct: 167 IIILFVGTSSRSFFKGIEMWKEETLLK 193
>gb|AAM15316.1| unknown protein [Arabidopsis thaliana] gi|4415908|gb|AAD20139.1|
unknown protein [Arabidopsis thaliana]
gi|25408492|pir||G84782 hypothetical protein At2g36630
[imported] - Arabidopsis thaliana
Length = 288
Score = 112 bits (279), Expect = 2e-23
Identities = 47/87 (54%), Positives = 69/87 (79%)
Query: 1 MITGGAGATVLYNLKKRHPTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTTL 60
MI G + ++V YN++ RHPT ++P++DYDLALLFQPML+LGI++GV+ +++FP W++T L
Sbjct: 107 MIMGASASSVWYNVRVRHPTKEVPILDYDLALLFQPMLLLGITVGVSLSVVFPYWLITVL 166
Query: 61 LIIFFTGISVNAFLKGVNTWKKETLTK 87
+II F G S +F KG+ WK+ETL K
Sbjct: 167 IIILFVGTSSRSFFKGIEMWKEETLLK 193
>gb|AAC12639.1| hypothetical protein [Mesembryanthemum crystallinum]
gi|7484617|pir||T12229 hypothetical protein - common
ice plant (fragment)
Length = 132
Score = 104 bits (259), Expect = 4e-21
Identities = 47/66 (71%), Positives = 57/66 (86%)
Query: 25 VIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTTLLIIFFTGISVNAFLKGVNTWKKET 84
+IDYDLALLFQPMLMLGIS+GVAFN+IF DWM+T LLI+ F G S AF++G++TWKKET
Sbjct: 1 IIDYDLALLFQPMLMLGISIGVAFNVIFADWMVTVLLIVLFVGTSTKAFMRGIDTWKKET 60
Query: 85 LTKKVA 90
L +K A
Sbjct: 61 LMQKEA 66
>gb|AAT77085.1| expressed protein [Oryza sativa (japonica cultivar-group)]
gi|41469272|gb|AAS07154.1| expressed protein [Oryza
sativa (japonica cultivar-group)]
Length = 475
Score = 103 bits (257), Expect = 7e-21
Identities = 48/84 (57%), Positives = 62/84 (73%)
Query: 1 MITGGAGATVLYNLKKRHPTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTTL 60
MI G + ++V YNL+ HPT + PVIDY LALLFQPMLMLGI++GV ++IFP W++T L
Sbjct: 118 MIMGASASSVWYNLQVSHPTKEAPVIDYKLALLFQPMLMLGITIGVELSVIFPYWLITVL 177
Query: 61 LIIFFTGISVNAFLKGVNTWKKET 84
+II F G S +F KG+ WK ET
Sbjct: 178 IIILFIGTSSRSFYKGILMWKDET 201
>ref|NP_915724.1| P0415A04.10 [Oryza sativa (japonica cultivar-group)]
Length = 488
Score = 77.0 bits (188), Expect = 7e-13
Identities = 37/85 (43%), Positives = 52/85 (60%), Gaps = 1/85 (1%)
Query: 1 MITGGAGATVLYNLKKRH-PTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTT 59
M+TGGA + VLYNL VIDYD+ALLFQP L+LG+S+GV N++FP+W++T
Sbjct: 138 MVTGGAASNVLYNLLCTGCGRRAAAVIDYDIALLFQPCLLLGVSIGVVCNVMFPEWLITA 197
Query: 60 LLIIFFTGISVNAFLKGVNTWKKET 84
L +F + G+ W E+
Sbjct: 198 LFALFLAFCTTKTLRAGLRIWSSES 222
>dbj|BAD53257.1| membrane protein-like [Oryza sativa (japonica cultivar-group)]
Length = 461
Score = 77.0 bits (188), Expect = 7e-13
Identities = 37/85 (43%), Positives = 52/85 (60%), Gaps = 1/85 (1%)
Query: 1 MITGGAGATVLYNLKKRH-PTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTT 59
M+TGGA + VLYNL VIDYD+ALLFQP L+LG+S+GV N++FP+W++T
Sbjct: 111 MVTGGAASNVLYNLLCTGCGRRAAAVIDYDIALLFQPCLLLGVSIGVVCNVMFPEWLITA 170
Query: 60 LLIIFFTGISVNAFLKGVNTWKKET 84
L +F + G+ W E+
Sbjct: 171 LFALFLAFCTTKTLRAGLRIWSSES 195
>ref|NP_176367.1| expressed protein [Arabidopsis thaliana] gi|4508075|gb|AAD21419.1|
50259 gi|13272465|gb|AAK17171.1| unknown protein
[Arabidopsis thaliana] gi|25404344|pir||B96643
hypothetical protein T13M11.10 [imported] - Arabidopsis
thaliana
Length = 458
Score = 73.6 bits (179), Expect = 8e-12
Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 1 MITGGAGATVLYNLKKRHPTLD-LPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTT 59
M+TGG+ A V NL R+P +ID+DLALL +P ++LG+S+GV NL+FP+W++T+
Sbjct: 106 MVTGGSIANVGCNLFVRNPKSGGKTLIDFDLALLLEPCMLLGVSIGVICNLVFPNWLITS 165
Query: 60 LLIIFFTGISVNAFLKGVNTWKKETLTKKV 89
L +F ++ F G+ W+ E+ K+
Sbjct: 166 LFAVFLAWSTLKTFGNGLYYWRLESEMVKI 195
>emb|CAA10487.1| hypothetical protein [Arabidopsis thaliana] gi|11358507|pir||T51355
membrane protein [imported] - Arabidopsis thaliana
(fragment)
Length = 389
Score = 73.6 bits (179), Expect = 8e-12
Identities = 36/90 (40%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
Query: 1 MITGGAGATVLYNLKKRHPTLD-LPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTT 59
M+TGG+ A V NL R+P +ID+DLALL +P ++LG+S+GV NL+FP+W++T+
Sbjct: 37 MVTGGSIANVGCNLFVRNPKSGGKTLIDFDLALLLEPCMLLGVSIGVICNLVFPNWLITS 96
Query: 60 LLIIFFTGISVNAFLKGVNTWKKETLTKKV 89
L +F ++ F G+ W+ E+ K+
Sbjct: 97 LFAVFLAWSTLKTFGNGLYYWRLESEMVKI 126
>ref|NP_915723.1| P0415A04.9 [Oryza sativa (japonica cultivar-group)]
Length = 590
Score = 72.4 bits (176), Expect = 2e-11
Identities = 33/87 (37%), Positives = 53/87 (59%), Gaps = 3/87 (3%)
Query: 1 MITGGAGATVLYNL---KKRHPTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWML 57
M+TGG + VLY L + P+IDYD+A++ QP L+LG+S+GV N++FP+W++
Sbjct: 122 MVTGGTLSNVLYTLIVLRGHEKGGHQPLIDYDIAVVSQPCLLLGVSVGVICNVMFPEWLI 181
Query: 58 TTLLIIFFTGISVNAFLKGVNTWKKET 84
T L +F + + G+ W+ ET
Sbjct: 182 TALFAVFLASATFKTYGTGMKRWRAET 208
>dbj|BAD53380.1| membrane protein-like [Oryza sativa (japonica cultivar-group)]
gi|53792418|dbj|BAD53256.1| membrane protein-like [Oryza
sativa (japonica cultivar-group)]
Length = 397
Score = 72.4 bits (176), Expect = 2e-11
Identities = 33/87 (37%), Positives = 53/87 (59%), Gaps = 3/87 (3%)
Query: 1 MITGGAGATVLYNL---KKRHPTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWML 57
M+TGG + VLY L + P+IDYD+A++ QP L+LG+S+GV N++FP+W++
Sbjct: 52 MVTGGTLSNVLYTLIVLRGHEKGGHQPLIDYDIAVVSQPCLLLGVSVGVICNVMFPEWLI 111
Query: 58 TTLLIIFFTGISVNAFLKGVNTWKKET 84
T L +F + + G+ W+ ET
Sbjct: 112 TALFAVFLASATFKTYGTGMKRWRAET 138
>ref|NP_172621.2| expressed protein [Arabidopsis thaliana]
Length = 367
Score = 68.6 bits (166), Expect = 3e-10
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 1 MITGGAGATVLYNLKKRHP-TLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTT 59
M+TG + A V NL R+P + D +ID+DLAL QP L+LG+S+GV N +FP+W++
Sbjct: 19 MVTGVSFANVGCNLFLRNPKSRDKTLIDFDLALTIQPCLLLGVSIGVICNRMFPNWLVLF 78
Query: 60 LLIIFFTGISVNAFLKGVNTWKKETLTKKV 89
L +F ++ KGV+ W E+ K+
Sbjct: 79 LFAVFLAWSTMKTCKKGVSYWNLESERAKI 108
>gb|AAF16643.1| T23J18.20 [Arabidopsis thaliana]
Length = 491
Score = 68.6 bits (166), Expect = 3e-10
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 1 MITGGAGATVLYNLKKRHP-TLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTT 59
M+TG + A V NL R+P + D +ID+DLAL QP L+LG+S+GV N +FP+W++
Sbjct: 143 MVTGVSFANVGCNLFLRNPKSRDKTLIDFDLALTIQPCLLLGVSIGVICNRMFPNWLVLF 202
Query: 60 LLIIFFTGISVNAFLKGVNTWKKETLTKKV 89
L +F ++ KGV+ W E+ K+
Sbjct: 203 LFAVFLAWSTMKTCKKGVSYWNLESERAKI 232
>emb|CAB79126.1| hypothetical protein [Arabidopsis thaliana]
gi|2911083|emb|CAA17545.1| hypothetical protein
[Arabidopsis thaliana] gi|15233581|ref|NP_193858.1|
hypothetical protein [Arabidopsis thaliana]
gi|7486596|pir||T04957 hypothetical protein F7J7.200 -
Arabidopsis thaliana
Length = 393
Score = 66.6 bits (161), Expect = 1e-09
Identities = 49/150 (32%), Positives = 73/150 (48%), Gaps = 29/150 (19%)
Query: 1 MITGGAGATVLYN---LKKRHPTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWML 57
M+TGG+ A ++ N KK +IDYDLALL +P ++LG+S+GV N +FP+W++
Sbjct: 93 MVTGGSIANLINNHFGCKK--------LIDYDLALLLEPCMLLGVSVGVICNKVFPEWLI 144
Query: 58 TTLLIIFFTGISVNAFLKGVNTWKKETLTKKVAYT*LIL*NEGHFGSSRFLFGSI*SVTK 117
T L ++F S+ G +WK LIL + SR +
Sbjct: 145 TGLFVVFLMWSSMETCENGHTSWKLS----------LILREKEDMRDSR--LAEVKRRRT 192
Query: 118 IIKHKALFL------LSRMFIGRNLDFFSL 141
II K L+L + F+GRNL S+
Sbjct: 193 IIFFKHLYLKIKKTETKQSFLGRNLGIISI 222
>emb|CAB79125.1| hypothetical protein [Arabidopsis thaliana]
gi|2911082|emb|CAA17544.1| hypothetical protein
[Arabidopsis thaliana] gi|7486594|pir||T04956
hypothetical protein F7J7.190 - Arabidopsis thaliana
Length = 431
Score = 65.5 bits (158), Expect = 2e-09
Identities = 33/84 (39%), Positives = 48/84 (56%), Gaps = 5/84 (5%)
Query: 1 MITGGAGATVLYNLKKRHPTLDLPVIDYDLALLFQPMLMLGISLGVAFNLIFPDWMLTTL 60
M+TGG+ A V+ NL LD YDLALL +P ++LG+S+GV N + P+W++T L
Sbjct: 105 MVTGGSIANVISNLFGGKALLD-----YDLALLLEPCMLLGVSIGVICNRVLPEWLITVL 159
Query: 61 LIIFFTGISVNAFLKGVNTWKKET 84
+F + GV WK E+
Sbjct: 160 FAVFLAWSILKTCRSGVKFWKLES 183
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.369 0.171 0.620
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 438,956,507
Number of Sequences: 2540612
Number of extensions: 14865238
Number of successful extensions: 89893
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 89860
Number of HSP's gapped (non-prelim): 26
length of query: 333
length of database: 863,360,394
effective HSP length: 128
effective length of query: 205
effective length of database: 538,162,058
effective search space: 110323221890
effective search space used: 110323221890
T: 11
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.7 bits)
S2: 75 (33.5 bits)
Medicago: description of AC141106.11