BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139709.19 + phase: 0
(353 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P06585|PSBA_PEA Photosystem Q(B) protein precursor (32 kDa th... 719 0.0
dbj|BAB33176.1| PSII 32 KDa protein [Lotus corniculatus var. jap... 717 0.0
sp|P04998|PSBA_MEDSA Photosystem Q(B) protein (32 kDa thylakoid ... 715 0.0
sp|P11848|PSBA_SINAL Photosystem Q(B) protein (32 kDa thylakoid ... 714 0.0
sp|P02957|PSBA_SOYBN Photosystem Q(B) protein (32 kDa thylakoid ... 714 0.0
gb|AAQ67339.1| photosystem II thylakoid membrane protein [Glycin... 714 0.0
sp|P18290|PSBA_BRANA Photosystem Q(B) protein (32 kDa thylakoid ... 714 0.0
emb|CAA56270.1| psbA [Arabidopsis thaliana] gi|6723714|emb|CAB67... 714 0.0
gb|AAT97977.1| photosystem II protein D1 [Camellia sinensis] gi|... 713 0.0
sp|P02956|PSBA_AMAHY Photosystem Q(B) protein (32 kDa thylakoid ... 713 0.0
dbj|BAD93469.1| photosystem II protein D1 [Silene latifolia] gi|... 712 0.0
emb|CAA30818.1| unnamed protein product [Nicotiana plumbaginifolia] 712 0.0
dbj|BAA76900.1| QB protein [Nicotiana tabacum] 712 0.0
sp|P04999|PSBA_PETHY Photosystem Q(B) protein (32 kDa thylakoid ... 712 0.0
sp|P32036|PSBA_CUSRE Photosystem Q(B) protein (32 kDa thylakoid ... 712 0.0
ref|YP_086946.1| PSII 32 kDa protein [Panax ginseng] gi|51235293... 712 0.0
emb|CAA35688.2| psbA [Vicia faba] gi|41019233|sp|P13910|PSBA_VIC... 712 0.0
sp|Q33282|PSBA_VIGUN Photosystem Q(B) protein (32 kDa thylakoid ... 712 0.0
gb|AAD00106.1| D1 protein [Magnolia pyramidata] gi|18202268|sp|O... 711 0.0
emb|CAB58232.1| herbicide-binding protein D1 [Secale cereale] gi... 711 0.0
>sp|P06585|PSBA_PEA Photosystem Q(B) protein precursor (32 kDa thylakoid membrane
protein) (Photosystem II protein D1)
gi|343032|gb|AAA84547.1| 34.5 Kd protein
Length = 353
Score = 719 bits (1856), Expect = 0.0
Identities = 352/353 (99%), Positives = 352/353 (99%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRDSENLW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRDSENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
>dbj|BAB33176.1| PSII 32 KDa protein [Lotus corniculatus var. japonicus]
gi|13518418|ref|NP_084778.1| photosystem II protein D1
[Lotus corniculatus var. japonicus]
gi|23821997|sp|Q9BBU3|PSBA_LOTJA Photosystem Q(B)
protein (32 kDa thylakoid membrane protein) (Photosystem
II protein D1)
Length = 353
Score = 717 bits (1852), Expect = 0.0
Identities = 351/353 (99%), Positives = 352/353 (99%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SENLW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
>sp|P04998|PSBA_MEDSA Photosystem Q(B) protein (32 kDa thylakoid membrane protein)
(Photosystem II protein D1) gi|11736|emb|CAA28646.1|
unnamed protein product [Medicago sativa]
Length = 353
Score = 715 bits (1845), Expect = 0.0
Identities = 350/353 (99%), Positives = 350/353 (99%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRDSE LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRDSETLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNII GAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIICGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
>sp|P11848|PSBA_SINAL Photosystem Q(B) protein (32 kDa thylakoid membrane protein)
(Photosystem II protein D1) gi|21154|emb|CAA25093.1|
unnamed protein product [Sinapis alba]
Length = 353
Score = 714 bits (1844), Expect = 0.0
Identities = 349/353 (98%), Positives = 352/353 (98%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE+PSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVESPSING 353
>sp|P02957|PSBA_SOYBN Photosystem Q(B) protein (32 kDa thylakoid membrane protein)
(Photosystem II protein D1) gi|11566|emb|CAA24986.1|
unnamed protein product [Glycine max]
Length = 353
Score = 714 bits (1843), Expect = 0.0
Identities = 348/353 (98%), Positives = 352/353 (99%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA++APSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIDAPSING 353
>gb|AAQ67339.1| photosystem II thylakoid membrane protein [Glycine max]
Length = 359
Score = 714 bits (1843), Expect = 0.0
Identities = 348/353 (98%), Positives = 352/353 (99%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 7 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 66
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 67 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 126
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 127 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 186
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 187 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 246
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 247 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 306
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA++APSING
Sbjct: 307 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIDAPSING 359
>sp|P18290|PSBA_BRANA Photosystem Q(B) protein (32 kDa thylakoid membrane protein)
(Photosystem II protein D1) (Triazine-resistance
protein) gi|336422|gb|AAA84447.1| triazine-resistance
gi|225583|prf||1306442A gene psbA
Length = 353
Score = 714 bits (1843), Expect = 0.0
Identities = 349/353 (98%), Positives = 351/353 (98%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYA FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYAGFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
>emb|CAA56270.1| psbA [Arabidopsis thaliana] gi|6723714|emb|CAB67123.1| PSII D1
protein [Oenothera elata subsp. hookeri]
gi|5881674|dbj|BAA84365.1| PSII 32 KDa protein
[Arabidopsis thaliana] gi|7525013|ref|NP_051039.1|
photosystem II protein D1 [Arabidopsis thaliana]
gi|13518299|ref|NP_084658.1| photosystem II protein D1
[Oenothera elata subsp. hookeri]
gi|44889036|sp|P83756|PSBA_OENHO Photosystem Q(B)
protein (32 kDa thylakoid membrane protein) (Photosystem
II protein D1) (PSII D1 protein)
gi|44889035|sp|P83755|PSBA_ARATH Photosystem Q(B)
protein (32 kDa thylakoid membrane protein) (Photosystem
II protein D1) (PSII D1 protein)
Length = 353
Score = 714 bits (1842), Expect = 0.0
Identities = 349/353 (98%), Positives = 351/353 (98%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>gb|AAT97977.1| photosystem II protein D1 [Camellia sinensis]
gi|53854405|gb|AAU95584.1| photosystem II protein D1
[Camellia sinensis] gi|53854403|gb|AAU95583.1|
photosystem II protein D1 [Camellia sinensis]
gi|53854401|gb|AAU95582.1| photosystem II protein D1
[Camellia sinensis] gi|53854399|gb|AAU95581.1|
photosystem II protein D1 [Camellia sinensis]
gi|53854397|gb|AAU95580.1| photosystem II protein D1
[Camellia sinensis] gi|53854395|gb|AAU95579.1|
photosystem II protein D1 [Camellia sinensis]
gi|53854393|gb|AAU95578.1| photosystem II protein D1
[Camellia sinensis] gi|53854391|gb|AAU95577.1|
photosystem II protein D1 [Camellia sinensis]
gi|53854389|gb|AAU95576.1| photosystem II protein D1
[Camellia sinensis] gi|53854387|gb|AAU95575.1|
photosystem II protein D1 [Camellia sinensis var.
assamica] gi|53854385|gb|AAU95574.1| photosystem II
protein D1 [Camellia tenuifolia]
gi|53854383|gb|AAU95573.1| photosystem II protein D1
[Camellia furfuracea] gi|53854381|gb|AAU95572.1|
photosystem II protein D1 [Camellia sinensis var.
assamica] gi|53854379|gb|AAU95571.1| photosystem II
protein D1 [Camellia sinensis var. assamica]
gi|11808|emb|CAA77338.1| PSII 32kd protein [Nicotiana
tabacum] gi|2369768|emb|CAA75027.1| photosystem II D1
protein [Chenopodium rubrum] gi|11307|emb|CAA33895.1|
unnamed protein product [Gossypium hirsutum]
gi|11755|emb|CAA30817.1| unnamed protein product
[Nicotiana plumbaginifolia] gi|12244|emb|CAA25815.1|
unnamed protein product [Solanum nigrum]
gi|7636085|emb|CAB88705.1| PSII 32 kD protein [Spinacia
oleracea] gi|20068311|emb|CAC88024.1| PSII 32 kD protein
[Atropa belladonna] gi|28261697|ref|NP_783212.1|
photosystem II protein D1 [Atropa belladonna]
gi|16755685|gb|AAL28074.1| photosystem II D1 protein
[Lactuca sativa] gi|11465935|ref|NP_054477.1|
photosystem II protein D1 [Nicotiana tabacum]
gi|11497504|ref|NP_054912.1| photosystem II protein D1
[Spinacia oleracea] gi|61230130|sp|P69565|PSBA_CHERU
Photosystem Q(B) protein (32 kDa thylakoid membrane
protein) (Photosystem II protein D1)
gi|61230129|sp|P69564|PSBA_GOSHI Photosystem Q(B)
protein (32 kDa thylakoid membrane protein) (Photosystem
II protein D1) gi|61230128|sp|P69563|PSBA_SOLNI
Photosystem Q(B) protein (32 kDa thylakoid membrane
protein) (Photosystem II protein D1)
gi|61230127|sp|P69562|PSBA_NICPL Photosystem Q(B)
protein (32 kDa thylakoid membrane protein) (Photosystem
II protein D1) gi|61230126|sp|P69561|PSBA_NICDE
Photosystem Q(B) protein (32 kDa thylakoid membrane
protein) (Photosystem II protein D1)
gi|61230125|sp|P69560|PSBA_SPIOL Photosystem Q(B)
protein precursor (32 kDa thylakoid membrane protein)
(Photosystem II protein D1)
gi|61252264|sp|P69557|PSBA_LACSA Photosystem Q(B)
protein (32 kDa thylakoid membrane protein) (Photosystem
II protein D1) gi|61252263|sp|P69556|PSBA_TOBAC
Photosystem Q(B) protein (32 kDa thylakoid membrane
protein) (Photosystem II protein D1)
gi|343497|gb|AAA84687.1| psbA protein
gi|4589846|dbj|BAA76899.1| QB protein [Nicotiana
glutinosa] gi|223587|prf||0901310A protein
psbA,thylakoid membrane
Length = 353
Score = 713 bits (1841), Expect = 0.0
Identities = 348/353 (98%), Positives = 351/353 (98%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353
>sp|P02956|PSBA_AMAHY Photosystem Q(B) protein (32 kDa thylakoid membrane protein)
(Photosystem II protein D1)
Length = 353
Score = 713 bits (1840), Expect = 0.0
Identities = 347/353 (98%), Positives = 351/353 (99%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353
>dbj|BAD93469.1| photosystem II protein D1 [Silene latifolia]
gi|548609|sp|P36491|PSBA_POPDE Photosystem Q(B) protein
(32 kDa thylakoid membrane protein) (Photosystem II
protein D1) gi|463209|emb|CAA55040.1| D1 protein
[Populus deltoides]
Length = 353
Score = 712 bits (1838), Expect = 0.0
Identities = 348/353 (98%), Positives = 350/353 (98%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE PS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSTNG 353
>emb|CAA30818.1| unnamed protein product [Nicotiana plumbaginifolia]
Length = 353
Score = 712 bits (1838), Expect = 0.0
Identities = 347/353 (98%), Positives = 351/353 (99%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYA+FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYANFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353
>dbj|BAA76900.1| QB protein [Nicotiana tabacum]
Length = 353
Score = 712 bits (1838), Expect = 0.0
Identities = 347/353 (98%), Positives = 351/353 (99%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYA+FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYATFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353
>sp|P04999|PSBA_PETHY Photosystem Q(B) protein (32 kDa thylakoid membrane protein)
(Photosystem II protein D1) gi|12104|emb|CAA28647.1|
unnamed protein product [Petunia x hybrida]
gi|82258|pir||A25579 photosystem II protein D1 precursor
- petunia chloroplast
Length = 353
Score = 712 bits (1837), Expect = 0.0
Identities = 347/353 (98%), Positives = 351/353 (99%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITS+ENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSSENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353
>sp|P32036|PSBA_CUSRE Photosystem Q(B) protein (32 kDa thylakoid membrane protein)
(Photosystem II protein D1) gi|12520|emb|CAA47847.1|
D1-protein [Cuscuta reflexa] gi|1096967|prf||2113216A
psbA gene
Length = 353
Score = 712 bits (1837), Expect = 0.0
Identities = 346/353 (98%), Positives = 351/353 (99%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNI+SGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIVSGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAP+ NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPATNG 353
>ref|YP_086946.1| PSII 32 kDa protein [Panax ginseng] gi|51235293|gb|AAT98489.1| PSII
32 kDa protein [Panax ginseng]
Length = 353
Score = 712 bits (1837), Expect = 0.0
Identities = 348/353 (98%), Positives = 350/353 (98%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAA AVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAAAAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>emb|CAA35688.2| psbA [Vicia faba] gi|41019233|sp|P13910|PSBA_VICFA Photosystem Q(B)
protein (32 kDa thylakoid membrane protein) (Photosystem
II protein D1)
Length = 353
Score = 712 bits (1837), Expect = 0.0
Identities = 347/353 (98%), Positives = 350/353 (98%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRDSENLW RFCNWIT+TENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRDSENLWGRFCNWITTTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSA IGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAVIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWI VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIVVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAV+APSI+G
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVDAPSISG 353
>sp|Q33282|PSBA_VIGUN Photosystem Q(B) protein (32 kDa thylakoid membrane protein)
(Photosystem II protein D1) gi|984735|emb|CAA56907.1|
photosystem II D1 protein [Vigna unguiculata]
Length = 353
Score = 712 bits (1837), Expect = 0.0
Identities = 347/353 (98%), Positives = 351/353 (99%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE+LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFG SLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS+NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAMEAPSVNG 353
>gb|AAD00106.1| D1 protein [Magnolia pyramidata] gi|18202268|sp|O98736|PSBA_MAGPY
Photosystem Q(B) protein (32 kDa thylakoid membrane
protein) (Photosystem II protein D1)
Length = 353
Score = 711 bits (1836), Expect = 0.0
Identities = 348/353 (98%), Positives = 350/353 (98%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+S +LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>emb|CAB58232.1| herbicide-binding protein D1 [Secale cereale]
gi|53828145|gb|AAU94352.1| PSII inhibitor sensitive D1
protein [Bromus tectorum] gi|14017552|ref|NP_114239.1|
photosystem II protein D1 [Triticum aestivum]
gi|17380247|sp|P12463|PSBA_WHEAT Photosystem Q(B)
protein (32 kDa thylakoid membrane protein) (Photosystem
II protein D1) gi|131256|sp|P10510|PSBA_SECCE
Photosystem Q(B) protein (32 kDa thylakoid membrane
protein) (Photosystem II protein D1)
gi|13928185|dbj|BAB47014.1| PSII 32kDa protein [Triticum
aestivum]
Length = 353
Score = 711 bits (1834), Expect = 0.0
Identities = 347/353 (98%), Positives = 350/353 (98%)
Query: 1 MTAILERRDSENLWSRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+S +LW RFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE PSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.324 0.139 0.438
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 621,094,617
Number of Sequences: 2540612
Number of extensions: 26854208
Number of successful extensions: 77824
Number of sequences better than 10.0: 1126
Number of HSP's better than 10.0 without gapping: 971
Number of HSP's successfully gapped in prelim test: 155
Number of HSP's that attempted gapping in prelim test: 76220
Number of HSP's gapped (non-prelim): 1135
length of query: 353
length of database: 863,360,394
effective HSP length: 129
effective length of query: 224
effective length of database: 535,621,446
effective search space: 119979203904
effective search space used: 119979203904
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 75 (33.5 bits)
Medicago: description of AC139709.19