BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC139344.5 + phase: 0
(250 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO92753.1| arabinogalactan protein [Gossypium hirsutum] 233 3e-60
gb|AAM62683.1| arabinogalactan protein-like [Arabidopsis thaliana] 228 1e-58
gb|AAT37952.1| fasciclin-like AGP 9 [Populus alba x Populus trem... 228 2e-58
dbj|BAB08232.1| unnamed protein product [Arabidopsis thaliana] g... 226 6e-58
gb|AAN18099.1| At5g60490/muf9_140 [Arabidopsis thaliana] gi|1529... 225 8e-58
gb|AAT37954.1| fasciclin-like AGP 11 [Populus alba x Populus tre... 221 2e-56
gb|AAT37956.1| fasciclin-like AGP 13 [Populus alba x Populus tre... 219 6e-56
gb|AAT37957.1| fasciclin-like AGP 14 [Populus alba x Populus tre... 218 1e-55
gb|AAD56235.1| arabinogalactan protein Pop14A9 [Populus x canesc... 215 1e-54
gb|AAT37958.1| fasciclin-like AGP 15 [Populus alba x Populus tre... 214 2e-54
emb|CAB86084.1| arabinogalactan protein-like [Arabidopsis thalia... 213 5e-54
gb|AAM62616.1| arabinogalactan protein-like [Arabidopsis thaliana] 213 5e-54
gb|AAT37951.1| fasciclin-like AGP 8 [Populus alba x Populus trem... 201 1e-50
ref|XP_493761.1| unnamed protein product [Oryza sativa (japonica... 193 4e-48
ref|XP_550213.1| putative arabinogalactan protein [Oryza sativa ... 193 4e-48
gb|AAT37947.1| fasciclin-like AGP 4 [Populus alba x Populus trem... 192 7e-48
gb|AAT37953.1| fasciclin-like AGP 10 [Populus alba x Populus tre... 186 5e-46
gb|AAT37950.1| fasciclin-like AGP 7 [Populus alba x Populus trem... 186 5e-46
pir||S52995 arabinogalactan-like protein - loblolly pine gi|6077... 186 7e-46
gb|AAT37949.1| fasciclin-like AGP 6 [Populus alba x Populus trem... 186 7e-46
>gb|AAO92753.1| arabinogalactan protein [Gossypium hirsutum]
Length = 243
Score = 233 bits (595), Expect = 3e-60
Identities = 124/245 (50%), Positives = 171/245 (69%), Gaps = 9/245 (3%)
Query: 5 KHPFLSFTLLLIVFFSSTTTLAQKSP-APAPSTDTAPTDIIRILKKAGGFTTLIRLLQTT 63
++ F + TLL++ S +TTLAQ APAPS PT++ +IL+KAG FT IRLL++T
Sbjct: 4 QYVFTTLTLLILFSLSCSTTLAQAPALAPAPS---GPTNVTKILEKAGQFTLFIRLLKST 60
Query: 64 QVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSN 123
QV+ Q+ QL NSN G+T+FAP DN+FSSLK G LNSL+DEQK +L+QFH++PT+++ S
Sbjct: 61 QVANQLLGQLNNSNNGMTVFAPTDNAFSSLKSGTLNSLTDEQKVELVQFHIVPTYLTSSQ 120
Query: 124 FDTLSNPVRTQAGDD-PYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKV 182
F T+SNP+RTQAGD + LN+T+SGN VN+TTG+ N +V GT+YTD QLAVYQ+D+V
Sbjct: 121 FQTISNPLRTQAGDSGDGKFPLNITTSGNSVNITTGLTNTSVSGTIYTDGQLAVYQIDQV 180
Query: 183 LLPRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAVNVKQRRLMLVPVAVAT 242
L P F +PPAPAPAP K+K+ K + V D+S A ++ L VA
Sbjct: 181 LQPLQIFAPRPPAPAPAPAKSKNKKATTVADSPDVTPADNSKAATLQNVGLF----GVAA 236
Query: 243 IIVAI 247
+++A+
Sbjct: 237 LVIAL 241
>gb|AAM62683.1| arabinogalactan protein-like [Arabidopsis thaliana]
Length = 248
Score = 228 bits (581), Expect = 1e-58
Identities = 123/245 (50%), Positives = 171/245 (69%), Gaps = 5/245 (2%)
Query: 4 MKHPFLSFTLLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTT 63
M+H + +++ ++ TL+Q SPA AP+ PT++ +IL+KAG FT IRLL++T
Sbjct: 1 MEHSLIILLFTVLLLTTTPGTLSQPSPAVAPAPP-GPTNVTKILEKAGQFTVFIRLLKST 59
Query: 64 QVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSN 123
V+ Q+ QL NS+ G+T+FAP+D+SF+ LK G LNSL+DEQ+ +LIQFH++P++VS SN
Sbjct: 60 GVANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSN 119
Query: 124 FDTLSNPVRTQAGDD-PYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKV 182
F T+SNP+RTQAGD LNVT+SGN VN+T+G+ N TV G VY+D QLAVYQVDKV
Sbjct: 120 FQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKV 179
Query: 183 LLPRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAVNVKQRRLMLVPVAVAT 242
LLP+ F +PPAPAPAP +K SKKK DSD + DD + R + V AV+
Sbjct: 180 LLPQQVFDPRPPAPAPAPSVSK-SKKKKDDSDS--SSDDSPADASFALRNVGSVCDAVSF 236
Query: 243 IIVAI 247
++++
Sbjct: 237 CVMSV 241
>gb|AAT37952.1| fasciclin-like AGP 9 [Populus alba x Populus tremula]
Length = 268
Score = 228 bits (580), Expect = 2e-58
Identities = 124/265 (46%), Positives = 166/265 (61%), Gaps = 26/265 (9%)
Query: 9 LSFTLLLIVFFSSTTTLAQKSPAPAP------------------------STDTAPTDII 44
LS LI+FF T +SPA AP +T P D+I
Sbjct: 6 LSLLFSLILFFLHCTKTLGQSPAAAPVMPPPTTPVKAPPTAPSQAPSAQVATSPGPVDVI 65
Query: 45 RILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDE 104
+IL+KAG FT +RL+Q T T++N +L +N G+T+FAP+DN+FSSLK GFLN+LSDE
Sbjct: 66 KILQKAGHFTVFVRLMQATTEDTELNKELNKTNNGITIFAPSDNAFSSLKAGFLNALSDE 125
Query: 105 QKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTV 164
K +L++FH+LP F+S S F T+SNPVRTQAG P R+ LNVT++GN VN+TTG+ N ++
Sbjct: 126 DKTELVKFHVLPAFISSSQFQTVSNPVRTQAGTGP-RVTLNVTTTGNFVNITTGLTNASI 184
Query: 165 GGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSG 224
GTVYTD QLA+YQ+DKVL P D F KPPAPAPAPE K +K + + A D S
Sbjct: 185 SGTVYTDSQLAIYQIDKVLFPLDIFTPKPPAPAPAPELGK-PRKAAPGVESPTAPKDTSD 243
Query: 225 AVNVKQRRLMLVPVAVATIIVAIYS 249
A+ + +AV+ ++ AI+S
Sbjct: 244 ALTPLILHNNALLLAVSCMVAAIFS 268
>dbj|BAB08232.1| unnamed protein product [Arabidopsis thaliana]
gi|15239344|ref|NP_200857.1| fasciclin-like
arabinogalactan-protein (FLA12) [Arabidopsis thaliana]
Length = 249
Score = 226 bits (575), Expect = 6e-58
Identities = 128/243 (52%), Positives = 172/243 (70%), Gaps = 12/243 (4%)
Query: 9 LSFTLLLIVFFSSTTT---LAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQV 65
L FT+LL++ TTT L+Q SPA AP+ PT++ +IL+KAG FT IRLL++T V
Sbjct: 8 LLFTVLLLL----TTTPGILSQPSPAVAPAPP-GPTNVTKILEKAGQFTVFIRLLKSTGV 62
Query: 66 STQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFD 125
+ Q+ QL NS+ G+T+FAP+D+SF+ LK G LNSL+DEQ+ +LIQFH++P++VS SNF
Sbjct: 63 ANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQ 122
Query: 126 TLSNPVRTQAGDD-PYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLL 184
T+SNP+RTQAGD LNVT+SGN VN+T+G+ N TV G VY+D QLAVYQVDKVLL
Sbjct: 123 TISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLL 182
Query: 185 PRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAVNVKQRRLMLVPVAVATII 244
P+ F +PPAPAPAP +K SKKK DSD + DD + R + V AV+ +
Sbjct: 183 PQQVFDPRPPAPAPAPSVSK-SKKKKDDSDS--SSDDSPADASFALRNVGSVCDAVSFCV 239
Query: 245 VAI 247
+++
Sbjct: 240 MSV 242
>gb|AAN18099.1| At5g60490/muf9_140 [Arabidopsis thaliana]
gi|15294288|gb|AAK95321.1| AT5g60490/muf9_140
[Arabidopsis thaliana]
Length = 239
Score = 225 bits (574), Expect = 8e-58
Identities = 126/222 (56%), Positives = 164/222 (73%), Gaps = 13/222 (5%)
Query: 9 LSFTLLLIVFFSSTTT---LAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQV 65
L FT+LL++ TTT L+Q SPA AP+ PT++ +IL+KAG FT IRLL++T V
Sbjct: 8 LLFTVLLLL----TTTPGILSQPSPAVAPAPP-GPTNVTKILEKAGQFTVFIRLLKSTGV 62
Query: 66 STQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFD 125
+ Q+ QL NS+ G+T+FAP+D+SF+ LK G LNSL+DEQ+ +LIQFH++P++VS SNF
Sbjct: 63 ANQLYGQLNNSDNGITIFAPSDSSFTGLKAGTLNSLTDEQQVELIQFHVIPSYVSSSNFQ 122
Query: 126 TLSNPVRTQAGDD-PYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLL 184
T+SNP+RTQAGD LNVT+SGN VN+T+G+ N TV G VY+D QLAVYQVDKVLL
Sbjct: 123 TISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVSGNVYSDGQLAVYQVDKVLL 182
Query: 185 PRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAV 226
P+ F +PPAPAPAP +K SKKK DSD + DDS A+
Sbjct: 183 PQQVFDPRPPAPAPAPSVSK-SKKKKDDSD---SSSDDSPAM 220
>gb|AAT37954.1| fasciclin-like AGP 11 [Populus alba x Populus tremula]
Length = 238
Score = 221 bits (562), Expect = 2e-56
Identities = 128/221 (57%), Positives = 159/221 (71%), Gaps = 12/221 (5%)
Query: 7 PFLSFTLLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVS 66
PF+ F L++F S+T AQ +P+PAPS PT+I IL KAG FTTLIRLL++TQ +
Sbjct: 9 PFVPF---LMLFLYSSTAFAQ-TPSPAPS---GPTNITAILAKAGQFTTLIRLLKSTQEA 61
Query: 67 TQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDT 126
QIN+QL NSN GLT+FAP DNSF++LK G LNSLSD+QK +L+QFH+LP F+SMSNF T
Sbjct: 62 DQINTQLNNSNQGLTVFAPTDNSFANLKAGTLNSLSDQQKVQLVQFHILPNFLSMSNFQT 121
Query: 127 LSNPVRTQAGDD-PYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLP 185
+SNP+RTQAG+ LNVT+SGNQVN+TTG+ TV T+YTD QL VYQVD+VLLP
Sbjct: 122 VSNPLRTQAGNSADGEFPLNVTTSGNQVNITTGVDTATVANTIYTDGQLVVYQVDQVLLP 181
Query: 186 RDFFVAKPPAPAPA-PEKTKSSKKKSSDSDGGVAGDDDSGA 225
D F PAPAP+ PEK +K + + A D SGA
Sbjct: 182 LDLF-GTAPAPAPSKPEKDVPAKAPAGSKED--ASVDASGA 219
>gb|AAT37956.1| fasciclin-like AGP 13 [Populus alba x Populus tremula]
Length = 239
Score = 219 bits (558), Expect = 6e-56
Identities = 128/250 (51%), Positives = 171/250 (68%), Gaps = 17/250 (6%)
Query: 3 MMKHPFLSFTLLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQT 62
M K F L+ F S+TT+AQ +P+PAPS PT+I IL+KAG FTTLIRL+++
Sbjct: 1 MRKQLLSPFVPFLMFFLYSSTTVAQ-TPSPAPS---GPTNITAILEKAGQFTTLIRLMKS 56
Query: 63 TQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMS 122
TQ + QIN+QL NSN GLT+FAP DN+F++LK G LNSLSD+QK +L+QFH++P F+SMS
Sbjct: 57 TQEADQINTQLNNSNQGLTVFAPPDNAFANLKAGALNSLSDQQKVQLVQFHIIPNFLSMS 116
Query: 123 NFDTLSNPVRTQAGDD-PYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDK 181
+F T+SNP+RTQAG+ LNVT+SGNQVN+TTG+ TV T++TD QL VYQVD+
Sbjct: 117 SFQTVSNPLRTQAGNSADGEFPLNVTTSGNQVNITTGVNTATVANTIFTDGQLVVYQVDQ 176
Query: 182 VLLPRDFF-VAKPPAPAPA-PEKTKSSKKKSSDSDGGVAGDDDSGAVNVKQRRLMLVPVA 239
VLLP D F A PAPAP+ P+K +K + + A D SGA + V+
Sbjct: 177 VLLPLDLFGTAAAPAPAPSKPDKDVPAKAPAGSKED--ASADASGAT--------IATVS 226
Query: 240 VATIIVAIYS 249
V+ +++A S
Sbjct: 227 VSLVLIAAIS 236
>gb|AAT37957.1| fasciclin-like AGP 14 [Populus alba x Populus tremula]
Length = 243
Score = 218 bits (555), Expect = 1e-55
Identities = 116/222 (52%), Positives = 159/222 (71%), Gaps = 5/222 (2%)
Query: 6 HPFLSFTLLLIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQV 65
H L LLI+ + TTT AQ SPAPAP+ PT++I+ILKKAG F T IRLL++TQ+
Sbjct: 5 HRLLISLYLLILAINLTTTTAQ-SPAPAPAPP-GPTNVIKILKKAGHFKTFIRLLKSTQL 62
Query: 66 STQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFD 125
+ +NSQL N+N GLT+FAP+D++FS+LK G ++SL+D++K +L+QFH++P F+S S FD
Sbjct: 63 DSNLNSQLGNTNNGLTIFAPSDSAFSALKTGTVHSLTDQEKVELMQFHIVPMFISSSQFD 122
Query: 126 TLSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLP 185
T+S+P++T AG R LNVT+SG+ +N++TG+ N T+ VYTD LA+YQVDKVLLP
Sbjct: 123 TVSSPLKTHAGSGA-RFQLNVTASGSSLNISTGLTNTTISDIVYTDTHLAIYQVDKVLLP 181
Query: 186 RDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAVN 227
D F KPP PAPAP K++S D V+ D S AV+
Sbjct: 182 LDIFTPKPPPPAPAP--APKLKEESESPDDAVSKKDISSAVS 221
>gb|AAD56235.1| arabinogalactan protein Pop14A9 [Populus x canescens]
Length = 240
Score = 215 bits (547), Expect = 1e-54
Identities = 115/223 (51%), Positives = 153/223 (68%), Gaps = 8/223 (3%)
Query: 7 PFLSFTLLLIVFF--SSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQ 64
P F+ ++FF LAQ SPA AP+ P ++ ++L+K G F+ IRLL+ TQ
Sbjct: 3 PKFLFSASFVLFFLLHCPPALAQ-SPAAAPAPP-GPINVTKVLEKGGQFSAFIRLLKATQ 60
Query: 65 VSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNF 124
+N QL N+N +T+FAP+DN+FSSLK G LNSLSD++K +L+QFH++P F+S S F
Sbjct: 61 EDVTLNGQLNNTNNAITIFAPSDNAFSSLKSGTLNSLSDQEKAELVQFHIIPQFLSSSQF 120
Query: 125 DTLSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLL 184
T+SNP+ TQAG RL LNVT++GN VN+TTG+ N +V GT+YTD+QLAV+QVDKVLL
Sbjct: 121 QTVSNPLTTQAGSGG-RLELNVTTTGNSVNITTGLTNTSVSGTIYTDNQLAVHQVDKVLL 179
Query: 185 PRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAVN 227
P D F KPP PAPAPEK K K ++ + D SGAV+
Sbjct: 180 PLDIFTPKPPTPAPAPEKPKKRSKAAASPESPA---DTSGAVS 219
>gb|AAT37958.1| fasciclin-like AGP 15 [Populus alba x Populus tremula]
Length = 240
Score = 214 bits (544), Expect = 2e-54
Identities = 115/223 (51%), Positives = 153/223 (68%), Gaps = 8/223 (3%)
Query: 7 PFLSFTLLLIVFF--SSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQ 64
P F+ ++FF LAQ SPA AP+ P ++ ++L+K G F+ IRLL+ TQ
Sbjct: 3 PKFLFSASFVLFFLLHCPPALAQ-SPAAAPAPP-GPINVTKVLEKGGQFSVFIRLLKATQ 60
Query: 65 VSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNF 124
+N QL N+N +T+FAP+D++FSSLK G LNSLSD++K +L+QFH++P F+S S F
Sbjct: 61 EDVTLNGQLNNTNNAITIFAPSDSAFSSLKSGTLNSLSDQEKAELVQFHIIPQFLSSSLF 120
Query: 125 DTLSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLL 184
T+SNP+ TQAG RL LNVT++GN VN+TTG+ N +V GT+YTD+QLAVYQVDKVLL
Sbjct: 121 QTVSNPLTTQAGSGG-RLELNVTTTGNSVNITTGLTNTSVSGTIYTDNQLAVYQVDKVLL 179
Query: 185 PRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGAVN 227
P D F KPP PAPAPEK K K ++ + D SGAV+
Sbjct: 180 PLDIFTPKPPTPAPAPEKPKKRSKAAASPESPA---DTSGAVS 219
>emb|CAB86084.1| arabinogalactan protein-like [Arabidopsis thaliana]
gi|14532750|gb|AAK64076.1| putative arabinogalactan
protein [Arabidopsis thaliana]
gi|13430542|gb|AAK25893.1| putative arabinogalactan
protein [Arabidopsis thaliana]
gi|9757768|dbj|BAB08377.1| unnamed protein product
[Arabidopsis thaliana] gi|15242651|ref|NP_195937.1|
fasciclin-like arabinogalactan-protein (FLA11)
[Arabidopsis thaliana] gi|11281995|pir||T48338
arabinogalactan protein-like - Arabidopsis thaliana
Length = 246
Score = 213 bits (541), Expect = 5e-54
Identities = 121/214 (56%), Positives = 151/214 (70%), Gaps = 7/214 (3%)
Query: 15 LIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQL- 73
L +FF T ++PAP PS PT+I IL+KAG FT IRLL++TQ S QIN+QL
Sbjct: 12 LFIFFLVIATTYGQAPAPGPS---GPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLN 68
Query: 74 LNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRT 133
+S+ GLT+FAP DN+F+SLK G LNSLSD+QK +L+QFH+LPT ++M F T+SNP+RT
Sbjct: 69 SSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRT 128
Query: 134 QAGDDPY-RLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAK 192
QAGD + LN+TSSGNQVN+TTG+V+ TV +VY+D QLAVYQVD+VLLP F
Sbjct: 129 QAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF-GS 187
Query: 193 PPAPAPAPEKTKS-SKKKSSDSDGGVAGDDDSGA 225
APAPAPEK S SK +S D G D S A
Sbjct: 188 SVAPAPAPEKGGSVSKGSASGGDDGGDSTDSSDA 221
>gb|AAM62616.1| arabinogalactan protein-like [Arabidopsis thaliana]
Length = 246
Score = 213 bits (541), Expect = 5e-54
Identities = 121/214 (56%), Positives = 151/214 (70%), Gaps = 7/214 (3%)
Query: 15 LIVFFSSTTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQL- 73
L +FF T ++PAP PS PT+I IL+KAG FT IRLL++TQ S QIN+QL
Sbjct: 12 LFIFFLVLATTYGQAPAPGPS---GPTNITAILEKAGQFTLFIRLLKSTQASDQINTQLN 68
Query: 74 LNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRT 133
+S+ GLT+FAP DN+F+SLK G LNSLSD+QK +L+QFH+LPT ++M F T+SNP+RT
Sbjct: 69 SSSSNGLTVFAPTDNAFNSLKSGTLNSLSDQQKVQLVQFHVLPTLITMPQFQTVSNPLRT 128
Query: 134 QAGDDPY-RLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAK 192
QAGD + LN+TSSGNQVN+TTG+V+ TV +VY+D QLAVYQVD+VLLP F
Sbjct: 129 QAGDGQNGKFPLNITSSGNQVNITTGVVSATVANSVYSDKQLAVYQVDQVLLPLAMF-GS 187
Query: 193 PPAPAPAPEKTKS-SKKKSSDSDGGVAGDDDSGA 225
APAPAPEK S SK +S D G D S A
Sbjct: 188 SVAPAPAPEKGGSVSKGSASGGDDGGDSTDSSDA 221
>gb|AAT37951.1| fasciclin-like AGP 8 [Populus alba x Populus tremula]
Length = 269
Score = 201 bits (512), Expect = 1e-50
Identities = 110/246 (44%), Positives = 151/246 (60%), Gaps = 26/246 (10%)
Query: 4 MKHPFLSFTLLLIVFFSSTTTLAQKSPAPAPS------------------------TDTA 39
M+ + L LI FF T +SPA AP+ T
Sbjct: 1 MRPQSVILALSLIFFFLHCTKTLCQSPAAAPAMAPPKTPVKAPPADSSQAPSAQVATSPG 60
Query: 40 PTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLN 99
P DI +IL+KAG FT RL+Q T T++N +L N+N G+T+ AP D++FS+LK GFLN
Sbjct: 61 PVDINKILQKAGHFTVFARLMQATTEDTELNKELNNTNNGITILAPTDSAFSTLKAGFLN 120
Query: 100 SLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGI 159
SLSDE K +L++FH+LP F+S S F T+SNPVRTQAG P R+ LNVT++GN VN+++G+
Sbjct: 121 SLSDEDKTELVKFHVLPAFISTSQFQTVSNPVRTQAGTGP-RVTLNVTTTGNFVNISSGL 179
Query: 160 VNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAG 219
N ++ GTVYTD QLA+YQ+DK L P + F KPPAP P P K +K + +++ +A
Sbjct: 180 TNASISGTVYTDSQLAIYQLDKGLFPLEVFSPKPPAPGPEPALGK-PRKAAPEAESPIAP 238
Query: 220 DDDSGA 225
+ GA
Sbjct: 239 KEIFGA 244
>ref|XP_493761.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
gi|9757679|dbj|BAB08198.1| EST D25138(R3286) corresponds
to a region of the predicted gene.~Similar to Pinus
taeda arabinogalactan-like protein (U09556) [Oryza
sativa (japonica cultivar-group)]
Length = 255
Score = 193 bits (490), Expect = 4e-48
Identities = 112/240 (46%), Positives = 148/240 (61%), Gaps = 14/240 (5%)
Query: 24 TLAQKSPAPA----PSTDTAP-------TDIIRILKKAGGFTTLIRLLQTTQVSTQINSQ 72
T A +PAPA P+T AP T+I +L KAG F TLIRL+++T + QI++Q
Sbjct: 11 TAAPAAPAPATPAAPATPAAPAPASTKTTNITGVLAKAGQFNTLIRLMRSTGAAEQIDNQ 70
Query: 73 LLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVR 132
L +S GLT+FAP DN+F+SL G LNSLSD+QKN L+Q+H+L T + MS FDT+SNP+R
Sbjct: 71 LNSSRNGLTVFAPTDNAFTSLPSGTLNSLSDQQKNSLVQYHVLSTLIPMSQFDTVSNPLR 130
Query: 133 TQAG-DDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVA 191
TQAG + P + LNVT+ G QVN++TG+VN TVG +YT L VYQVDKVLLP +
Sbjct: 131 TQAGSNSPGQYPLNVTAEGQQVNISTGVVNATVGNALYTGDNLVVYQVDKVLLPMAIYST 190
Query: 192 KPPAPAPAPEKTKSSKK--KSSDSDGGVAGDDDSGAVNVKQRRLMLVPVAVATIIVAIYS 249
PAPAP TK K +S +D A D A + A +++A+ S
Sbjct: 191 PAPAPAPLSPATKKKGKTPATSVADAPEAADATPDATTPSLAAARVTAGAGVGVVLALAS 250
>ref|XP_550213.1| putative arabinogalactan protein [Oryza sativa (japonica
cultivar-group)] gi|54290196|dbj|BAD61084.1| putative
arabinogalactan protein [Oryza sativa (japonica
cultivar-group)]
Length = 269
Score = 193 bits (490), Expect = 4e-48
Identities = 112/240 (46%), Positives = 148/240 (61%), Gaps = 14/240 (5%)
Query: 24 TLAQKSPAPA----PSTDTAP-------TDIIRILKKAGGFTTLIRLLQTTQVSTQINSQ 72
T A +PAPA P+T AP T+I +L KAG F TLIRL+++T + QI++Q
Sbjct: 25 TAAPAAPAPATPAAPATPAAPAPASTKTTNITGVLAKAGQFNTLIRLMRSTGAAEQIDNQ 84
Query: 73 LLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVR 132
L +S GLT+FAP DN+F+SL G LNSLSD+QKN L+Q+H+L T + MS FDT+SNP+R
Sbjct: 85 LNSSRNGLTVFAPTDNAFTSLPSGTLNSLSDQQKNSLVQYHVLSTLIPMSQFDTVSNPLR 144
Query: 133 TQAG-DDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVA 191
TQAG + P + LNVT+ G QVN++TG+VN TVG +YT L VYQVDKVLLP +
Sbjct: 145 TQAGSNSPGQYPLNVTAEGQQVNISTGVVNATVGNALYTGDNLVVYQVDKVLLPMAIYST 204
Query: 192 KPPAPAPAPEKTKSSKK--KSSDSDGGVAGDDDSGAVNVKQRRLMLVPVAVATIIVAIYS 249
PAPAP TK K +S +D A D A + A +++A+ S
Sbjct: 205 PAPAPAPLSPATKKKGKTPATSVADAPEAADATPDATTPSLAAARVTAGAGVGVVLALAS 264
>gb|AAT37947.1| fasciclin-like AGP 4 [Populus alba x Populus tremula]
Length = 266
Score = 192 bits (488), Expect = 7e-48
Identities = 118/261 (45%), Positives = 164/261 (62%), Gaps = 27/261 (10%)
Query: 10 SFTLLLIVFFSSTTTLAQKSPAPAPSTDTAP-------------------TDIIRILKKA 50
SF+ L+ F TTT AQ SPA P+ A T++ +IL+KA
Sbjct: 10 SFSFFLL-FLHCTTTFAQTSPAATPAQAPAVVVAQPPAATPTQAAQPHGITNVTKILEKA 68
Query: 51 GGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLI 110
G FT IRLL++TQ + S L +S+ G+T+FAP D++FS LK G LN+LSD K++L+
Sbjct: 69 GHFTIFIRLLRSTQEENHLFSALNDSSSGVTIFAPTDSAFSELKSGTLNTLSDGDKSELV 128
Query: 111 QFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYT 170
+FH++PTF+S S F T+SNP+ T AG RL LNVTS N VN+TTG+ N ++ GTVYT
Sbjct: 129 KFHVVPTFLSTSQFQTVSNPLGTWAGTG-NRLPLNVTSYPNSVNITTGLTNTSLSGTVYT 187
Query: 171 DHQLAVYQVDKVLLPRDFFVAKPPAP---APAPEK-TKSSKKKSSDSDGGVAGDDDSGAV 226
D+QLA+Y+++KVLLP+D F +K PAP APAPEK TK+ + +S VA D SGA+
Sbjct: 188 DNQLAIYKIEKVLLPKDIFASKAPAPAPVAPAPEKPTKAVPAATVESP--VAPVDISGAL 245
Query: 227 NVKQRRLMLVPVAVATIIVAI 247
Q +++ VA + A+
Sbjct: 246 MFTQNQVVGSVGIVAAAMFAL 266
>gb|AAT37953.1| fasciclin-like AGP 10 [Populus alba x Populus tremula]
Length = 264
Score = 186 bits (472), Expect = 5e-46
Identities = 108/252 (42%), Positives = 153/252 (59%), Gaps = 23/252 (9%)
Query: 7 PFLSFTLLLIVFFSSTTTLAQ-----------KSPAPAPSTDTAPTDIIRILKKAGGFTT 55
PF+ LL++ + + T Q K+P P P PTD I+IL KAG F +
Sbjct: 19 PFILLFWLLLLLHTCSQTFCQSPAQSPAATRTKAPGPPPPP-AGPTDTIQILLKAGRFLS 77
Query: 56 LIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLL 115
+RL++ T V TQ+ SQL +S G+T+FAPNDN+FSSL G + SL+D +K + +QFH+L
Sbjct: 78 FVRLMKATHVDTQLFSQLNSSTDGITMFAPNDNAFSSLVAGAVGSLNDREKLEFVQFHIL 137
Query: 116 PTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLA 175
P F+S+S+F TLSNPV+T AG D + L +T+S N V +++G+ ++ T+YTD Q+A
Sbjct: 138 PRFLSISDFQTLSNPVKTLAGSD-RKFPLTITTSDNSVTVSSGLTKTSISNTIYTDKQVA 196
Query: 176 VYQVDKVLLPRDFFVAKPPAPAPAPEKTKSSKKKSSDSDGGVAGDDDSGA-VNVKQRRLM 234
+Y+VDKVL+P+D F PPAPAPA K ++ D VA D SGA V Q R+
Sbjct: 197 IYEVDKVLVPKDLFPPAPPAPAPA--------KPLAEPD-PVAPRDASGALVTALQHRVN 247
Query: 235 LVPVAVATIIVA 246
+V I A
Sbjct: 248 VVLFGAGLYIAA 259
>gb|AAT37950.1| fasciclin-like AGP 7 [Populus alba x Populus tremula]
Length = 269
Score = 186 bits (472), Expect = 5e-46
Identities = 116/272 (42%), Positives = 157/272 (57%), Gaps = 37/272 (13%)
Query: 4 MKHPFLSFTL-LLIVFFSSTTTLAQK---SPAPAPSTDTAP------------------- 40
MKH F F +++ T TL+Q +PA AP+ +AP
Sbjct: 1 MKHHFSVFLFPAILLLLHCTQTLSQSPTAAPAKAPAAASAPPPAATSSAQASPPVMVPVQ 60
Query: 41 -----TDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSL-K 94
++I+IL+KAGGF IRL+++TQ Q+ SQL +S G+T+FAP D +FS++ K
Sbjct: 61 VSKGPVNVIKILQKAGGFAVFIRLIKSTQEDIQVFSQLNDSRDGVTIFAPTDGAFSAIIK 120
Query: 95 PGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVN 154
G LNSLSD QK +L+QFH++P ++ +NF T+SNP+ T AG R LNV ++ N VN
Sbjct: 121 SGVLNSLSDHQKIELVQFHIIPKVLTTANFQTVSNPITTLAGSGS-RFALNVITTENMVN 179
Query: 155 MTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAPEKTKSSKKKSSDSD 214
+T+G+ N +V VYTD QLAVYQVDKVLLP D F K PAPAP K KK + +D
Sbjct: 180 VTSGLTNTSVSAIVYTDSQLAVYQVDKVLLPLDIFAPKALVPAPAPPK----PKKDNGAD 235
Query: 215 GGVAGDDDSGAVNVKQRRLMLVPVAVATIIVA 246
+ D SGAV+ ML+ IIVA
Sbjct: 236 TPMVPKDISGAVSCVMLNTMLIS---GVIIVA 264
>pir||S52995 arabinogalactan-like protein - loblolly pine
gi|607774|gb|AAA74420.1| arabinogalactan-like protein
Length = 264
Score = 186 bits (471), Expect = 7e-46
Identities = 101/233 (43%), Positives = 144/233 (61%), Gaps = 5/233 (2%)
Query: 21 STTTLAQKSPAPAPSTDTAPTDIIRILKKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGL 80
+T A +PA AP+ A ++ IL KAG F T + LL++TQV Q+ SQL NS G+
Sbjct: 33 ATAPAAAATPA-APAPSPASLNLSGILDKAGQFNTFLSLLKSTQVGMQLQSQLNNSQQGI 91
Query: 81 TLFAPNDNSFSSLKPGFLNSLSDEQKNKLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPY 140
T+FAP+D +F++LKPG LNS++D+ K L+Q+H LP++ + S F T+SNPVRT A +
Sbjct: 92 TIFAPSDAAFAALKPGALNSITDQDKIALLQYHALPSYYTFSQFQTVSNPVRTMASGNGG 151
Query: 141 RLGLNVTSSGNQVNMTTGIVNVTVGGTVYTDHQLAVYQVDKVLLPRDFFVAKPPAPAPAP 200
G+NVT+ GN VN++TG+VN V VY+ +AVYQVDKVLLP + F KPPA AP P
Sbjct: 152 PFGVNVTAFGNSVNVSTGLVNTPVNSAVYSQSPVAVYQVDKVLLPEEIFGVKPPAAAPTP 211
Query: 201 EK----TKSSKKKSSDSDGGVAGDDDSGAVNVKQRRLMLVPVAVATIIVAIYS 249
E + + S S G + G++ + L LV +A +++ I S
Sbjct: 212 EPGAPVSSPAVSPSGASGSGASTSSACGSMAALAKGLYLVFLAAGALVLVISS 264
>gb|AAT37949.1| fasciclin-like AGP 6 [Populus alba x Populus tremula]
Length = 269
Score = 186 bits (471), Expect = 7e-46
Identities = 112/263 (42%), Positives = 161/263 (60%), Gaps = 20/263 (7%)
Query: 5 KHPFLSFTLLLI------VFFSSTTTLAQKSPA--------PAPSTDTAP---TDIIRIL 47
+H SF++L + F S T ++PA P+ AP T++ +IL
Sbjct: 4 QHSIFSFSMLFLSICYINTFAQSPTAAPAQAPAVVVAQPPVATPTQAAAPHGITNVTKIL 63
Query: 48 KKAGGFTTLIRLLQTTQVSTQINSQLLNSNGGLTLFAPNDNSFSSLKPGFLNSLSDEQKN 107
+KAG FT IRLL++TQ + S L +S+ G+T+FAP D +FS LK G LN+LSD K+
Sbjct: 64 EKAGHFTIFIRLLRSTQEENHLFSALNDSSSGVTIFAPTDGAFSELKSGTLNTLSDGDKS 123
Query: 108 KLIQFHLLPTFVSMSNFDTLSNPVRTQAGDDPYRLGLNVTSSGNQVNMTTGIVNVTVGGT 167
+L++FH++PTF+S S F T+SNP+ T AG RL LNVTS N VN+TTG+ N ++ GT
Sbjct: 124 ELVKFHVVPTFLSTSQFQTVSNPLGTWAGTGS-RLPLNVTSYPNSVNITTGLTNTSLSGT 182
Query: 168 VYTDHQLAVYQVDKVLLPRDFFVAKPPAPAP-APEKTKSSKK-KSSDSDGGVAGDDDSGA 225
VYTD+QLA+Y+++KVLLP+D F K PAPAP AP K +K +++++ V D S A
Sbjct: 183 VYTDNQLAIYKIEKVLLPKDIFAFKAPAPAPAAPAPEKPTKAVPAANAESPVDPVDISRA 242
Query: 226 VNVKQRRLMLVPVAVATIIVAIY 248
V ++ V VA + A +
Sbjct: 243 VTFMHNNVVGSLVIVAAAMFACH 265
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.316 0.132 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 415,004,930
Number of Sequences: 2540612
Number of extensions: 17844424
Number of successful extensions: 91060
Number of sequences better than 10.0: 244
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 90619
Number of HSP's gapped (non-prelim): 391
length of query: 250
length of database: 863,360,394
effective HSP length: 125
effective length of query: 125
effective length of database: 545,783,894
effective search space: 68222986750
effective search space used: 68222986750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)
Medicago: description of AC139344.5