BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136472.7 + phase: 0
(123 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_915901.1| putative dihydropyrimidinase [Oryza sativa (jap... 176 9e-44
dbj|BAD68072.1| putative dihydropyrimidine amidohydrolase [Oryza... 176 9e-44
gb|AAL34189.1| putative dihydropyrimidinase [Arabidopsis thalian... 174 4e-43
dbj|BAB10038.1| dihydropyrimidinase [Arabidopsis thaliana] gi|28... 174 4e-43
dbj|BAD93873.1| dihydropyrimidinase like protein [Arabidopsis th... 166 2e-40
ref|ZP_00207242.1| COG0044: Dihydroorotase and related cyclic am... 107 5e-23
gb|AAV95062.1| D-hydantoinase [Silicibacter pomeroyi DSS-3] gi|5... 106 1e-22
ref|NP_774255.1| dihydropyrimidinase [Bradyrhizobium japonicum U... 105 3e-22
ref|NP_533058.1| dihydropyrimidinase [Agrobacterium tumefaciens ... 104 6e-22
gb|AAK88123.1| AGR_C_4328p [Agrobacterium tumefaciens str. C58] ... 104 6e-22
ref|ZP_00267390.1| COG0044: Dihydroorotase and related cyclic am... 103 1e-21
ref|NP_103173.1| dihydropyrimidinase [Mesorhizobium loti MAFF303... 102 2e-21
ref|ZP_00339327.1| COG0044: Dihydroorotase and related cyclic am... 102 2e-21
ref|NP_249132.1| dihydropyrimidinase [Pseudomonas aeruginosa PAO... 101 5e-21
emb|CAC47033.1| PUTATIVE D-HYDANTOINASE (DIHYDROPYRIMIDINASE) PR... 100 8e-21
gb|AAO33383.1| dihydropyrimidine amidohydrolase [Dictyostelium d... 99 2e-20
ref|XP_646121.1| hypothetical protein DDB0191172 [Dictyostelium ... 99 2e-20
ref|ZP_00195328.2| COG0044: Dihydroorotase and related cyclic am... 98 5e-20
gb|AAQ90019.1| D-hydantoinase [Pseudomonas putida] 97 1e-19
gb|AAC00209.1| D-hydantoinase [Pseudomonas putida] gi|3334230|sp... 96 3e-19
>ref|NP_915901.1| putative dihydropyrimidinase [Oryza sativa (japonica
cultivar-group)] gi|13872973|dbj|BAB44078.1| putative
dihydropyrimidine amidohydrolase [Oryza sativa (japonica
cultivar-group)]
Length = 539
Score = 176 bits (447), Expect = 9e-44
Identities = 82/101 (81%), Positives = 92/101 (90%)
Query: 1 MSIDAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKA 60
MSIDAM+E+AKA++ GQRVIGEPV+SGL LDDSWLW PDF A+KYVMSPPIR+ GH+KA
Sbjct: 293 MSIDAMDEIAKAKREGQRVIGEPVVSGLVLDDSWLWDPDFMIASKYVMSPPIREAGHNKA 352
Query: 61 LQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
LQ ALS+G+LQLVGTDHC FNSTQKAFG DDFRKIPNGVNG
Sbjct: 353 LQVALSSGILQLVGTDHCTFNSTQKAFGSDDFRKIPNGVNG 393
>dbj|BAD68072.1| putative dihydropyrimidine amidohydrolase [Oryza sativa (japonica
cultivar-group)]
Length = 511
Score = 176 bits (447), Expect = 9e-44
Identities = 82/101 (81%), Positives = 92/101 (90%)
Query: 1 MSIDAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKA 60
MSIDAM+E+AKA++ GQRVIGEPV+SGL LDDSWLW PDF A+KYVMSPPIR+ GH+KA
Sbjct: 265 MSIDAMDEIAKAKREGQRVIGEPVVSGLVLDDSWLWDPDFMIASKYVMSPPIREAGHNKA 324
Query: 61 LQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
LQ ALS+G+LQLVGTDHC FNSTQKAFG DDFRKIPNGVNG
Sbjct: 325 LQVALSSGILQLVGTDHCTFNSTQKAFGSDDFRKIPNGVNG 365
>gb|AAL34189.1| putative dihydropyrimidinase [Arabidopsis thaliana]
gi|13878037|gb|AAK44096.1| putative dihydropyrimidinase
[Arabidopsis thaliana]
Length = 248
Score = 174 bits (441), Expect = 4e-43
Identities = 81/101 (80%), Positives = 90/101 (88%)
Query: 1 MSIDAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKA 60
MS+DAM+E+AKARKSGQ+VIGEPV+SGL LDD WLW PDF A+KYVMSPPIR GH KA
Sbjct: 1 MSVDAMDEIAKARKSGQKVIGEPVVSGLILDDHWLWDPDFTIASKYVMSPPIRPVGHGKA 60
Query: 61 LQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
LQ ALSTG+LQLVGTDHC FNSTQKA G+DDFR+IPNGVNG
Sbjct: 61 LQDALSTGILQLVGTDHCTFNSTQKALGLDDFRRIPNGVNG 101
>dbj|BAB10038.1| dihydropyrimidinase [Arabidopsis thaliana]
gi|28194047|gb|AAO33381.1| dihydropyrimidine
amidohydrolase [Arabidopsis thaliana]
gi|42567801|ref|NP_568258.2| dihydropyrimidinase /
DHPase / dihydropyrimidine amidohydrolase / hydantoinase
(PYD2) [Arabidopsis thaliana]
Length = 531
Score = 174 bits (441), Expect = 4e-43
Identities = 81/101 (80%), Positives = 90/101 (88%)
Query: 1 MSIDAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKA 60
MS+DAM+E+AKARKSGQ+VIGEPV+SGL LDD WLW PDF A+KYVMSPPIR GH KA
Sbjct: 284 MSVDAMDEIAKARKSGQKVIGEPVVSGLILDDHWLWDPDFTIASKYVMSPPIRPVGHGKA 343
Query: 61 LQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
LQ ALSTG+LQLVGTDHC FNSTQKA G+DDFR+IPNGVNG
Sbjct: 344 LQDALSTGILQLVGTDHCTFNSTQKALGLDDFRRIPNGVNG 384
>dbj|BAD93873.1| dihydropyrimidinase like protein [Arabidopsis thaliana]
Length = 243
Score = 166 bits (419), Expect = 2e-40
Identities = 77/96 (80%), Positives = 85/96 (88%)
Query: 6 MEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKALQAAL 65
M+E+AKARKSGQ+VIGEPV+SGL LDD WLW PDF A+KYVMSPPIR GH KALQ AL
Sbjct: 1 MDEIAKARKSGQKVIGEPVVSGLILDDHWLWDPDFTIASKYVMSPPIRPVGHGKALQDAL 60
Query: 66 STGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
STG+LQLVGTDHC FNSTQKA G+DDFR+IPNGVNG
Sbjct: 61 STGILQLVGTDHCTFNSTQKALGLDDFRRIPNGVNG 96
>ref|ZP_00207242.1| COG0044: Dihydroorotase and related cyclic amidohydrolases
[Rhodobacter sphaeroides 2.4.1]
Length = 483
Score = 107 bits (268), Expect = 5e-23
Identities = 50/98 (51%), Positives = 66/98 (67%)
Query: 4 DAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKALQA 63
+A E + +AR G+RV GEP++ L LD+S +HPD+D AA+ VMSPP R + H +L A
Sbjct: 240 EAHEAIRRARMQGKRVWGEPLIQHLTLDESEYFHPDWDHAARRVMSPPFRNRQHQDSLWA 299
Query: 64 ALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
L +G L +V TDHC F + QK FG+ DF KIPNG G
Sbjct: 300 GLQSGSLSVVATDHCAFTTEQKRFGVGDFTKIPNGTGG 337
>gb|AAV95062.1| D-hydantoinase [Silicibacter pomeroyi DSS-3]
gi|56696659|ref|YP_167020.1| D-hydantoinase
[Silicibacter pomeroyi DSS-3]
Length = 484
Score = 106 bits (265), Expect = 1e-22
Identities = 49/98 (50%), Positives = 66/98 (67%)
Query: 4 DAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKALQA 63
+A E + +AR G+RV GEP++ L LD+S +HPD+D AA+ VMSPP R + H +L A
Sbjct: 241 EAHEAIRRARMQGKRVWGEPLIQHLTLDESEYFHPDWDHAARRVMSPPFRNKQHQDSLWA 300
Query: 64 ALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
L +G L +V TDHC F + QK +G+ DF KIPNG G
Sbjct: 301 GLQSGSLSVVATDHCAFTTEQKRYGVGDFSKIPNGTGG 338
>ref|NP_774255.1| dihydropyrimidinase [Bradyrhizobium japonicum USDA 110]
gi|27355898|dbj|BAC52880.1| dihydropyrimidinase
[Bradyrhizobium japonicum USDA 110]
Length = 484
Score = 105 bits (262), Expect = 3e-22
Identities = 52/106 (49%), Positives = 68/106 (64%)
Query: 4 DAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKALQA 63
+A E +A+AR +G+RV GEP++ L LD H D+D +A+ VMSPP R + H +L A
Sbjct: 244 EAHEAIARARAAGKRVYGEPLIQHLLLDAREYQHKDWDHSAQRVMSPPFRDKQHQDSLWA 303
Query: 64 ALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNGDHSNLRYL 109
L +G LQ+V TDHC F + QK FG+ DFRKIPNG G L L
Sbjct: 304 GLQSGSLQVVATDHCAFTTEQKRFGLGDFRKIPNGTGGLEDRLALL 349
>ref|NP_533058.1| dihydropyrimidinase [Agrobacterium tumefaciens str. C58]
gi|17740870|gb|AAL43374.1| dihydropyrimidinase
[Agrobacterium tumefaciens str. C58]
gi|25290208|pir||AH2869 dihydropyrimidinase [imported] -
Agrobacterium tumefaciens (strain C58, Dupont)
Length = 485
Score = 104 bits (259), Expect = 6e-22
Identities = 50/97 (51%), Positives = 66/97 (67%)
Query: 5 AMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKALQAA 64
A E + +AR++G RV GEP++ L LD+S + D+D AA+ VMSPP R + H +L A
Sbjct: 243 AHEAIRRARQNGMRVYGEPLIQHLILDESEYANADWDHAARRVMSPPFRNRQHQDSLWAG 302
Query: 65 LSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
L++G LQ V TDHC F + QK FG+ DFRKIPNG G
Sbjct: 303 LASGSLQCVATDHCAFTTEQKRFGLGDFRKIPNGTGG 339
>gb|AAK88123.1| AGR_C_4328p [Agrobacterium tumefaciens str. C58]
gi|15889657|ref|NP_355338.1| hypothetical protein
AGR_C_4328 [Agrobacterium tumefaciens str. C58]
gi|25290207|pir||B97646 dihydropyrimidinase (PA0441)
[imported] - Agrobacterium tumefaciens (strain C58,
Cereon)
Length = 506
Score = 104 bits (259), Expect = 6e-22
Identities = 50/97 (51%), Positives = 66/97 (67%)
Query: 5 AMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKALQAA 64
A E + +AR++G RV GEP++ L LD+S + D+D AA+ VMSPP R + H +L A
Sbjct: 264 AHEAIRRARQNGMRVYGEPLIQHLILDESEYANADWDHAARRVMSPPFRNRQHQDSLWAG 323
Query: 65 LSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
L++G LQ V TDHC F + QK FG+ DFRKIPNG G
Sbjct: 324 LASGSLQCVATDHCAFTTEQKRFGLGDFRKIPNGTGG 360
>ref|ZP_00267390.1| COG0044: Dihydroorotase and related cyclic amidohydrolases
[Pseudomonas fluorescens PfO-1]
Length = 479
Score = 103 bits (256), Expect = 1e-21
Identities = 53/106 (50%), Positives = 63/106 (59%)
Query: 4 DAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKALQA 63
+A++E+ AR GQ V GE + L LDDS HPD+ TAA YVMSPP R +GH AL
Sbjct: 244 EALDEITYARSKGQPVYGEVLAGHLLLDDSVYQHPDWQTAAGYVMSPPFRPRGHQDALWH 303
Query: 64 ALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNGDHSNLRYL 109
L +G L TDHC F + QKA G DDF KIPNG G + L
Sbjct: 304 GLQSGNLHTTATDHCCFCAEQKAAGRDDFSKIPNGTAGIEDRMAVL 349
>ref|NP_103173.1| dihydropyrimidinase [Mesorhizobium loti MAFF303099]
gi|14022349|dbj|BAB48959.1| dihydropyrimidinase
[Mesorhizobium loti MAFF303099]
Length = 483
Score = 102 bits (255), Expect = 2e-21
Identities = 51/108 (47%), Positives = 67/108 (61%)
Query: 5 AMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKALQAA 64
A E + +AR+ G RV GEP++ L LD++ ++ D+D AA+ VMSPP R + H +L A
Sbjct: 241 AHEAIRRARQKGMRVFGEPLVQHLTLDETEYFNKDWDHAARRVMSPPFRNKLHQDSLWAG 300
Query: 65 LSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNGDHSNLRYLRPK 112
L G LQ+V TDHC F + QK FG+ DF KIPNG G L L K
Sbjct: 301 LQAGSLQVVATDHCAFTTKQKRFGVGDFTKIPNGTGGLEDRLPVLWTK 348
>ref|ZP_00339327.1| COG0044: Dihydroorotase and related cyclic amidohydrolases
[Silicibacter sp. TM1040]
Length = 484
Score = 102 bits (254), Expect = 2e-21
Identities = 47/98 (47%), Positives = 67/98 (67%)
Query: 4 DAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKALQA 63
++ E + +AR G+RV GEP++ L LD+S ++PD+D AA+ VMSPP R + H +L A
Sbjct: 241 ESHEAIRRARMLGKRVWGEPLIQHLTLDESEYFNPDWDHAARRVMSPPFRNKQHQDSLWA 300
Query: 64 ALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
L +G L +V TDHC F++ QK +G+ DF KIPNG G
Sbjct: 301 GLQSGSLSVVATDHCAFSTEQKRYGVGDFTKIPNGTGG 338
>ref|NP_249132.1| dihydropyrimidinase [Pseudomonas aeruginosa PAO1]
gi|9946299|gb|AAG03830.1| dihydropyrimidinase
[Pseudomonas aeruginosa PAO1] gi|11348431|pir||H83590
dihydropyrimidinase PA0441 [imported] - Pseudomonas
aeruginosa (strain PAO1) gi|53727146|ref|ZP_00140892.2|
COG0044: Dihydroorotase and related cyclic
amidohydrolases [Pseudomonas aeruginosa UCBPP-PA14]
Length = 479
Score = 101 bits (251), Expect = 5e-21
Identities = 54/108 (50%), Positives = 64/108 (59%)
Query: 2 SIDAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKAL 61
S +A++E+A AR GQ V GE + L LDDS HPD+ TAA YVMSPP R H +AL
Sbjct: 242 SREALDEIAYARAKGQPVYGEVLAGHLLLDDSVYRHPDWATAAGYVMSPPFRPVEHQEAL 301
Query: 62 QAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNGDHSNLRYL 109
L +G L TDHC F + QKA G DDF KIPNG G + L
Sbjct: 302 WRGLQSGNLHTTATDHCCFCAEQKAMGRDDFSKIPNGTAGIEDRMALL 349
>emb|CAC47033.1| PUTATIVE D-HYDANTOINASE (DIHYDROPYRIMIDINASE) PROTEIN
[Sinorhizobium meliloti] gi|15966207|ref|NP_386560.1|
PUTATIVE D-HYDANTOINASE (DIHYDROPYRIMIDINASE) PROTEIN
[Sinorhizobium meliloti 1021]
Length = 484
Score = 100 bits (249), Expect = 8e-21
Identities = 47/97 (48%), Positives = 64/97 (65%)
Query: 5 AMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKALQAA 64
A E + +AR G RV GEP++ L LD++ + D+D AA+ VMSPP R + H +L A
Sbjct: 242 AHEAIRRARAKGMRVFGEPLIQHLTLDETEYFDKDWDHAARRVMSPPFRNKLHQDSLWAG 301
Query: 65 LSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
L++G LQ+V TDHC F + QK FG+ DF +IPNG G
Sbjct: 302 LASGSLQVVATDHCAFTTEQKRFGVGDFTRIPNGTGG 338
>gb|AAO33383.1| dihydropyrimidine amidohydrolase [Dictyostelium discoideum]
Length = 503
Score = 99.0 bits (245), Expect = 2e-20
Identities = 52/101 (51%), Positives = 64/101 (62%), Gaps = 1/101 (0%)
Query: 2 SIDAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDK-A 60
SI A + + K RK G RV GEP+ +GL +D S +W+ D+ AA +VM PPIR K
Sbjct: 250 SIGAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGV 309
Query: 61 LQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
L L+ G L VGTD+C F + QKA G DDF KIPNGVNG
Sbjct: 310 LMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNGVNG 350
>ref|XP_646121.1| hypothetical protein DDB0191172 [Dictyostelium discoideum]
gi|60474036|gb|EAL71973.1| hypothetical protein
DDB0191172 [Dictyostelium discoideum]
Length = 503
Score = 99.0 bits (245), Expect = 2e-20
Identities = 52/101 (51%), Positives = 64/101 (62%), Gaps = 1/101 (0%)
Query: 2 SIDAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDK-A 60
SI A + + K RK G RV GEP+ +GL +D S +W+ D+ AA +VM PPIR K
Sbjct: 250 SIGAADVICKHRKEGVRVYGEPIAAGLGVDGSHMWNHDWRHAAAFVMGPPIRPDPRTKGV 309
Query: 61 LQAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
L L+ G L VGTD+C F + QKA G DDF KIPNGVNG
Sbjct: 310 LMDYLARGDLDCVGTDNCTFCADQKAMGKDDFTKIPNGVNG 350
>ref|ZP_00195328.2| COG0044: Dihydroorotase and related cyclic amidohydrolases
[Mesorhizobium sp. BNC1]
Length = 485
Score = 97.8 bits (242), Expect = 5e-20
Identities = 46/95 (48%), Positives = 63/95 (65%)
Query: 7 EEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKALQAALS 66
E + +AR+ G RV GEP++ L LD+S +PD++ AA+ VMSPP R + H +L A L+
Sbjct: 243 EAIRRARQKGMRVYGEPLIQHLLLDESEYRNPDWEEAARRVMSPPFRDKRHQDSLWAGLA 302
Query: 67 TGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNG 101
G LQ+V TDH F + QK G++DF KIPNG G
Sbjct: 303 AGSLQVVATDHAAFTTEQKRLGLNDFTKIPNGTGG 337
>gb|AAQ90019.1| D-hydantoinase [Pseudomonas putida]
Length = 479
Score = 96.7 bits (239), Expect = 1e-19
Identities = 52/108 (48%), Positives = 64/108 (59%)
Query: 2 SIDAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKAL 61
S +A++E+A AR GQ V GE + L LDDS PD+ TAA YVMSPP R + H +AL
Sbjct: 242 SREALDEIAYARGKGQPVYGEVLPGHLLLDDSVYRDPDWATAAGYVMSPPFRPREHQEAL 301
Query: 62 QAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNGDHSNLRYL 109
L +G L TDHC F + QKA G DDF +IPNG G + L
Sbjct: 302 WRGLQSGNLHTTATDHCCFCAEQKAMGRDDFSRIPNGTAGIEDRMAVL 349
>gb|AAC00209.1| D-hydantoinase [Pseudomonas putida] gi|3334230|sp|Q59699|HYDA_PSEPU
D-hydantoinase (Dihydropyrimidinase) (DHPase)
Length = 495
Score = 95.5 bits (236), Expect = 3e-19
Identities = 51/108 (47%), Positives = 63/108 (58%)
Query: 2 SIDAMEEVAKARKSGQRVIGEPVLSGLALDDSWLWHPDFDTAAKYVMSPPIRKQGHDKAL 61
S +A++E+ AR GQ V GE + L LDDS PD+ TAA YVMSPP R + H +AL
Sbjct: 242 SREALDEITYARAKGQPVYGEVLPGHLLLDDSVYRDPDWATAAGYVMSPPFRPREHQEAL 301
Query: 62 QAALSTGVLQLVGTDHCVFNSTQKAFGIDDFRKIPNGVNGDHSNLRYL 109
L +G L TDHC F + QKA G DDF +IPNG G + L
Sbjct: 302 WRGLQSGNLHTTATDHCCFCAEQKAMGRDDFSRIPNGTAGIEDRMAVL 349
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.320 0.137 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 210,909,501
Number of Sequences: 2540612
Number of extensions: 7778554
Number of successful extensions: 18040
Number of sequences better than 10.0: 364
Number of HSP's better than 10.0 without gapping: 279
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 17592
Number of HSP's gapped (non-prelim): 365
length of query: 123
length of database: 863,360,394
effective HSP length: 99
effective length of query: 24
effective length of database: 611,839,806
effective search space: 14684155344
effective search space used: 14684155344
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC136472.7