BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC136138.6 - phase: 0 /pseudo
(339 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAC28384.1| mariner transposase [Glycine max] gi|7488706|pir|... 543 e-153
ref|NP_912355.1| unknown protein [Oryza sativa (japonica cultiva... 317 4e-85
emb|CAD41469.2| OSJNBa0079A21.13 [Oryza sativa (japonica cultiva... 316 7e-85
ref|XP_470325.1| putative transposase [Oryza sativa (japonica cu... 286 6e-76
emb|CAE04907.2| OSJNBa0082E08.4 [Oryza sativa (japonica cultivar... 285 1e-75
ref|XP_470629.1| Putative transposase [Oryza sativa (japonica cu... 282 9e-75
gb|AAX95638.1| hypothetical protein [Oryza sativa (japonica cult... 281 2e-74
ref|XP_476063.1| hypothetical protein [Oryza sativa (japonica cu... 278 2e-73
emb|CAD40538.2| OSJNBa0055C08.7 [Oryza sativa (japonica cultivar... 270 5e-71
gb|AAP53116.1| putative transposable element [Oryza sativa (japo... 266 7e-70
gb|AAL69349.1| transposase [Glycine max] 251 3e-65
emb|CAE01628.2| OSJNBa0029H02.9 [Oryza sativa (japonica cultivar... 250 5e-65
ref|XP_493795.1| unnamed protein product [Oryza sativa (japonica... 247 3e-64
gb|AAM97157.1| transposon protein, putative, mariner sub-class [... 226 8e-58
gb|AAL69354.1| transposase [Zea diploperennis] 180 5e-44
gb|AAL69350.1| transposase [Tripsacum pilosum] 175 2e-42
gb|AAL69335.1| transposase [Arundinaria simonii] 168 2e-40
gb|AAL69339.1| transposase [Cynodon dactylon] 167 5e-40
gb|AAL69348.1| transposase [Iris x nelsonii] gi|18419515|gb|AAL6... 166 7e-40
gb|AAL69340.1| transposase [Pariana radiciflora] 166 7e-40
>gb|AAC28384.1| mariner transposase [Glycine max] gi|7488706|pir||T06335 probable
transposase - soybean transposon mariner element Soymar1
Length = 425
Score = 543 bits (1398), Expect = e-153
Identities = 270/284 (95%), Positives = 275/284 (96%)
Query: 7 VRTLVVAMNTNTSAVYRLIL*GAIQRHSSAIKPQLTEEGKRLRLEFCLSMLEGIPHDPMF 66
VRTL VAM TNTSA+YRLI GAI+RHSSAIKPQLTEEGKRLRLEFCLSMLEGIPHDPMF
Sbjct: 94 VRTLAVAMKTNTSAMYRLIQSGAIKRHSSAIKPQLTEEGKRLRLEFCLSMLEGIPHDPMF 153
Query: 67 KSMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDSEK 126
+SMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLT VARPRFDSEK
Sbjct: 154 QSMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTAVARPRFDSEK 213
Query: 127 NVTFSGKIGIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKEVW 186
NVTFSGKIGIF FVTQEPAKRTSVNRVAGTMETKAITSINRDLIRS IEKVLPATKEVW
Sbjct: 214 NVTFSGKIGIFLFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSVFIEKVLPATKEVW 273
Query: 187 LRDELGSTIFIQQDNARTHINPNDPEFIQAATQDGFDIRLMCQPPNSPDFNVLDLGFFSA 246
RDELGSTIFIQQDNARTHINP+DPEF+QAATQDGFDIRLMCQPPNSPDFNVLDLGFFSA
Sbjct: 274 PRDELGSTIFIQQDNARTHINPDDPEFVQAATQDGFDIRLMCQPPNSPDFNVLDLGFFSA 333
Query: 247 IQSLHYKEAPKTIDELVNAVVKSFENYCVVKSNFIFLSLQLCMI 290
IQSLHYKEAPKTIDELVNAVVKSFENYCVVKSNFIFLSLQLCMI
Sbjct: 334 IQSLHYKEAPKTIDELVNAVVKSFENYCVVKSNFIFLSLQLCMI 377
>ref|NP_912355.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|29893625|gb|AAP06879.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 519
Score = 317 bits (811), Expect = 4e-85
Identities = 156/285 (54%), Positives = 203/285 (70%), Gaps = 2/285 (0%)
Query: 7 VRTLVVAMNTNTSAVYRLIL*GAIQRHSSAIKPQLTEEGKRLRLEFCLSMLEG--IPHDP 64
+R L A++ + + ++R + G +RH++AIK LTE+ + ++FC+ ML+ IP +P
Sbjct: 187 LRDLANALHMSKTTLFRRLKEGRFRRHTNAIKFTLTEDNMKACVQFCIQMLDSQSIPDEP 246
Query: 65 MFKSMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDS 124
FKS+YNI++IDEKWFY TK E YYL DE P R+ KSKNF+ KVMFL ARPRFD
Sbjct: 247 TFKSLYNIVYIDEKWFYRTKPDENYYLSLDEPNPRRNVKSKNFIDKVMFLAAKARPRFDE 306
Query: 125 EKNVTFSGKIGIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKE 184
TF GKIGIFPF E AKR+S +R GTME KA+TS+ RD+IR++LIEKVLPA K
Sbjct: 307 YGECTFDGKIGIFPFTYWEAAKRSSRSRERGTMELKAMTSVTRDIIRNYLIEKVLPAIKH 366
Query: 185 VWLRDELGSTIFIQQDNARTHINPNDPEFIQAATQDGFDIRLMCQPPNSPDFNVLDLGFF 244
W +E G IFIQQDNA+THI +DP F+ A +DG+DIRL CQPPNSPD NVLDLGFF
Sbjct: 367 KWPNEERGLPIFIQQDNAKTHIAVDDPAFLSVAQEDGWDIRLTCQPPNSPDLNVLDLGFF 426
Query: 245 SAIQSLHYKEAPKTIDELVNAVVKSFENYCVVKSNFIFLSLQLCM 289
+A+QSL K +P I+E+ V+K++E Y +SN +FL+LQ CM
Sbjct: 427 AALQSLFQKSSPSNIEEIETNVIKAYEEYPANRSNHVFLTLQGCM 471
>emb|CAD41469.2| OSJNBa0079A21.13 [Oryza sativa (japonica cultivar-group)]
gi|50927512|ref|XP_473402.1| OSJNBa0079A21.13 [Oryza
sativa (japonica cultivar-group)]
Length = 453
Score = 316 bits (809), Expect = 7e-85
Identities = 156/285 (54%), Positives = 202/285 (70%), Gaps = 2/285 (0%)
Query: 7 VRTLVVAMNTNTSAVYRLIL*GAIQRHSSAIKPQLTEEGKRLRLEFCLSMLEG--IPHDP 64
+R L A++ + ++R + G +RH++AIK LTE+ + R++FC+ ML+ IP P
Sbjct: 121 LRDLANALHMLKTTLFRRLKEGRFRRHTNAIKFTLTEDNMKARVQFCIQMLDSQSIPDKP 180
Query: 65 MFKSMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDS 124
FKS+YNI++IDEKWFY TK E YYL DE P R+ KSKNF+ KVMFL ARPRFD
Sbjct: 181 TFKSLYNIVYIDEKWFYRTKPDENYYLSLDEPNPRRNVKSKNFIDKVMFLAAKARPRFDE 240
Query: 125 EKNVTFSGKIGIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKE 184
TF GKIGIFPF E AKR+S +R GTME KA+T++ RD+IR++LIEKVLPA K
Sbjct: 241 YGECTFDGKIGIFPFTYWEAAKRSSRSRERGTMELKAMTTVMRDIIRNYLIEKVLPAIKH 300
Query: 185 VWLRDELGSTIFIQQDNARTHINPNDPEFIQAATQDGFDIRLMCQPPNSPDFNVLDLGFF 244
W +E G IFIQQDNA+THI +DP F+ A +DG+DIRL CQPPNSPD NVLDLGFF
Sbjct: 301 KWPNEERGLPIFIQQDNAKTHITVDDPAFLSVAQEDGWDIRLTCQPPNSPDLNVLDLGFF 360
Query: 245 SAIQSLHYKEAPKTIDELVNAVVKSFENYCVVKSNFIFLSLQLCM 289
+A+QSL K +P I+E+ V+K++E Y +SN +FL+LQ CM
Sbjct: 361 AALQSLFQKSSPSNIEEIETNVIKAYEEYPADRSNHVFLTLQGCM 405
>ref|XP_470325.1| putative transposase [Oryza sativa (japonica cultivar-group)]
gi|40714692|gb|AAR88598.1| putative transposase [Oryza
sativa (japonica cultivar-group)]
Length = 565
Score = 286 bits (732), Expect = 6e-76
Identities = 145/286 (50%), Positives = 199/286 (68%), Gaps = 3/286 (1%)
Query: 7 VRTLVVAMNTNTSAVYRLIL*GAIQRHSSAIKPQLTEEGKRLRLEFCLSMLEG--IPHDP 64
+R+ A S ++R++ G I+RHS+ +KP L EE KR RL++C+SML+ +P++P
Sbjct: 231 LRSFASAAGIPKSTLHRMLKEGLIRRHSNTLKPLLKEENKRSRLQWCISMLDWHTLPNEP 290
Query: 65 MFKSMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDS 124
F M NI+HIDEKWF TKK+ +YL+ ED P+R ++KN + KVMFL VARPR++
Sbjct: 291 KFVDMRNIVHIDEKWFNTTKKTRTFYLVHWEDDPYRPVQNKNSIDKVMFLAAVARPRYNE 350
Query: 125 EKNVTFSGKIGIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKE 184
E TF GKIG++PF +EPA+RTS NR GT+ TK I ++RD +RSFLI KVLPA
Sbjct: 351 EGICTFDGKIGLWPFTKKEPAQRTSQNRPRGTLVTKTI-KVDRDTVRSFLIAKVLPAIIS 409
Query: 185 VWLRDELGSTIFIQQDNARTHINPNDPEFIQAATQDGFDIRLMCQPPNSPDFNVLDLGFF 244
W RD+ STI+IQQDNA H+ +D +F A +Q GFDIRLM QPPNSPD N LDLGFF
Sbjct: 410 SWPRDDAHSTIWIQQDNAPAHVPVDDYQFAYAVSQTGFDIRLMHQPPNSPDMNALDLGFF 469
Query: 245 SAIQSLHYKEAPKTIDELVNAVVKSFENYCVVKSNFIFLSLQLCMI 290
+++QSL Y+ + +DEL++ V + F+ Y K N +FL+LQ C++
Sbjct: 470 ASLQSLTYRRISRNMDELIHNVEQEFQAYDDNKLNRVFLTLQSCLL 515
>emb|CAE04907.2| OSJNBa0082E08.4 [Oryza sativa (japonica cultivar-group)]
Length = 502
Score = 285 bits (729), Expect = 1e-75
Identities = 139/276 (50%), Positives = 198/276 (71%), Gaps = 4/276 (1%)
Query: 14 MNTNTSAVYRLIL*GAIQRHSSAIKPQLTEEGKRLRLEFCLSMLEGIPHD-PMFKSMYNI 72
+N + S + R + G ++RHSS+IKP LTE K+ RL++C+ M++ H P FK ++
Sbjct: 98 LNMSKSKIQRYLRKGFLRRHSSSIKPYLTEANKKSRLKWCVDMIKRDLHGGPRFKDFFDF 157
Query: 73 IHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDSEKNVTFSG 132
+ IDEKWFY+++KSE+YYLLP++D PHR+CK+KN++P++MFL V ARPRF + N F G
Sbjct: 158 VLIDEKWFYLSQKSEKYYLLPEQDDPHRTCKNKNYIPRLMFLCVCARPRF-RDGNCIFDG 216
Query: 133 KIGIFPFVTQEPAKRTSVN--RVAGTMETKAITSINRDLIRSFLIEKVLPATKEVWLRDE 190
+I FP VT +PA R +V RV G + K ITSI R++IR F+I KVLPA + W +++
Sbjct: 217 RISCFPLVTYQPAMRGNVRTGRVRGDLVLKPITSITREVIRDFMINKVLPAIRAKWPKED 276
Query: 191 LGSTIFIQQDNARTHINPNDPEFIQAATQDGFDIRLMCQPPNSPDFNVLDLGFFSAIQSL 250
+G IFIQQDNA +H+N +D +F + A Q+GFDIRL+CQ PNSPDFN+LDL FF AIQ++
Sbjct: 277 VGKPIFIQQDNAPSHLNLDDSDFCEHAKQEGFDIRLICQTPNSPDFNILDLDFFRAIQAI 336
Query: 251 HYKEAPKTIDELVNAVVKSFENYCVVKSNFIFLSLQ 286
Y + KTI+ LV V ++F Y K+N +F++LQ
Sbjct: 337 QYNKNAKTIEALVPTVEEAFMEYSAHKANRMFVTLQ 372
>ref|XP_470629.1| Putative transposase [Oryza sativa (japonica cultivar-group)]
gi|20330765|gb|AAM19128.1| Putative transposase [Oryza
sativa (japonica cultivar-group)]
Length = 576
Score = 282 bits (722), Expect = 9e-75
Identities = 144/286 (50%), Positives = 201/286 (69%), Gaps = 3/286 (1%)
Query: 7 VRTLVVAMNTNTSAVYRLIL*GAIQRHSSAIKPQLTEEGKRLRLEFCLSMLEG--IPHDP 64
+R+L A+N + S V+RL+ GA++RHS++IKP L E K+ RLEFC+SML+ + +P
Sbjct: 245 IRSLASALNASKSQVHRLVKEGALRRHSNSIKPYLKEANKKQRLEFCVSMLDAATLNAEP 304
Query: 65 MFKSMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDS 124
F M NI+HIDEKWF T K++ +YL+ +ED+P R ++KN + KVMFL+ +A+PR+D
Sbjct: 305 RFIDMQNIVHIDEKWFNATMKNKTFYLVFNEDEPVRCVQNKNAIDKVMFLSTLAKPRYDE 364
Query: 125 EKNVTFSGKIGIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKE 184
E N F GKIGI+PFV +EPA+R+S NR GT+ TK+I ++R+ R+FLI KV+PA
Sbjct: 365 EGNCYFDGKIGIWPFVRKEPAQRSSRNRPKGTLVTKSIM-VSRETSRAFLITKVIPAIAS 423
Query: 185 VWLRDELGSTIFIQQDNARTHINPNDPEFIQAATQDGFDIRLMCQPPNSPDFNVLDLGFF 244
W R+++G TI+IQQDNA THI PND F A Q G DIR+M QPPNSPD NVLDLGFF
Sbjct: 424 CWPREDVGKTIWIQQDNALTHILPNDEAFALAVAQVGLDIRIMNQPPNSPDMNVLDLGFF 483
Query: 245 SAIQSLHYKEAPKTIDELVNAVVKSFENYCVVKSNFIFLSLQLCMI 290
+++QS Y + +DEL++ V + + Y + +FL+LQ C I
Sbjct: 484 ASLQSKTYLKNCSNMDELISNVDEEYNEYNSNLVSRVFLNLQACFI 529
>gb|AAX95638.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|50918023|ref|XP_469408.1| putative transposase [Oryza
sativa (japonica cultivar-group)]
gi|28273357|gb|AAO38443.1| putative transposase [Oryza
sativa (japonica cultivar-group)]
Length = 565
Score = 281 bits (719), Expect = 2e-74
Identities = 142/286 (49%), Positives = 197/286 (68%), Gaps = 3/286 (1%)
Query: 7 VRTLVVAMNTNTSAVYRLIL*GAIQRHSSAIKPQLTEEGKRLRLEFCLSMLEG--IPHDP 64
+R+L A+ + S ++RL G ++RHS+++KP L E K+ RL++C+ ML+ +P+DP
Sbjct: 234 IRSLAEALGVSKSTLHRLFKEGHLRRHSNSLKPYLKEANKKERLQWCVGMLDHRTLPNDP 293
Query: 65 MFKSMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDS 124
F M NI+HIDEKWF TKK +YL P E++P+R ++KN + KVMFL+ VARPR+D+
Sbjct: 294 KFIEMENIVHIDEKWFNATKKDRTFYLHPLEEEPYRPVQNKNAIEKVMFLSTVARPRYDA 353
Query: 125 EKNVTFSGKIGIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKE 184
E N TF GKIGI+PFV +EPA+R S NR GT+ TK I ++RD +RSF+I KVLPA +
Sbjct: 354 EGNCTFDGKIGIWPFVRKEPAQRRSRNRERGTLVTKTI-KVDRDTMRSFIISKVLPAIRA 412
Query: 185 VWLRDELGSTIFIQQDNARTHINPNDPEFIQAATQDGFDIRLMCQPPNSPDFNVLDLGFF 244
W ++ TIFIQQDNARTH+ +D +F A Q G DIRL+ QPPNSPD N LDLGFF
Sbjct: 413 CWPLEDARRTIFIQQDNARTHVPIDDEQFSVAVAQMGLDIRLVNQPPNSPDMNCLDLGFF 472
Query: 245 SAIQSLHYKEAPKTIDELVNAVVKSFENYCVVKSNFIFLSLQLCMI 290
+++QSL K ++EL+ V K + +Y N +F++LQ C I
Sbjct: 473 ASLQSLTANRVSKNMEELIENVQKEYNDYDPKTLNRVFVTLQSCCI 518
>ref|XP_476063.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|47777448|gb|AAT38081.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 572
Score = 278 bits (711), Expect = 2e-73
Identities = 143/298 (47%), Positives = 203/298 (67%), Gaps = 4/298 (1%)
Query: 7 VRTLVVAMNTNTSAVYRLIL*GAIQRHSSAIKPQLTEEGKRLRLEFCLSMLEG--IPHDP 64
+R+L A+ + S ++R G I+RHS+++KP L E K+ RL +C+SML+ +P++P
Sbjct: 241 IRSLAQALGVSKSTLHRWFKEGLIRRHSNSLKPYLKEANKKERLRWCVSMLDPHTLPNNP 300
Query: 65 MFKSMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDS 124
F M NIIHIDEKWF +KK + +YL P E++P+ + +KN + KVMFL+ VA+PR+D
Sbjct: 301 KFIEMENIIHIDEKWFNASKKEKTFYLYPGEEEPYFTVHNKNAIDKVMFLSAVAKPRYDD 360
Query: 125 EKNVTFSGKIGIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKE 184
E N TF+GKIGI+PF +EPA+R S NR GT+ TK I ++RD IRSF+I KVLPA +
Sbjct: 361 EGNCTFNGKIGIWPFTRKEPAQRRSRNRERGTLVTKPI-KVDRDTIRSFMISKVLPAIRA 419
Query: 185 VWLRDELGSTIFIQQDNARTHINPNDPEFIQAATQDGFDIRLMCQPPNSPDFNVLDLGFF 244
W R++ TI+IQQDNARTH+ +D +F A Q G DIRL+ QPPNSPD N LDLGFF
Sbjct: 420 CWPREDARKTIWIQQDNARTHLPIDDAQFGVAVAQTGLDIRLVNQPPNSPDMNCLDLGFF 479
Query: 245 SAIQSLHYKEAPKTIDELVNAVVKSFENYCVVKSNFIFLSLQLCMIH-DRDNESQRFQ 301
+++QSL + + +DE++ V K + +Y N +FL+LQ C I R NE +++
Sbjct: 480 ASLQSLTHNRISRNMDEIIENVHKEYHDYNPNTLNRVFLTLQGCYIEVMRANEGNKYK 537
>emb|CAD40538.2| OSJNBa0055C08.7 [Oryza sativa (japonica cultivar-group)]
gi|50923881|ref|XP_472301.1| OSJNBa0055C08.7 [Oryza
sativa (japonica cultivar-group)]
Length = 505
Score = 270 bits (690), Expect = 5e-71
Identities = 137/268 (51%), Positives = 184/268 (68%), Gaps = 3/268 (1%)
Query: 7 VRTLVVAMNTNTSAVYRLIL*GAIQRHSSAIKPQLTEEGKRLRLEFCLSMLEG--IPHDP 64
+R+L A+ S ++R G I+RHS+++KP L E K+ RL +C+SML+ +P+ P
Sbjct: 239 IRSLAQALGVPKSTLHRWFKEGLIRRHSNSLKPYLKEANKKERLRWCVSMLDPSTLPNSP 298
Query: 65 MFKSMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDS 124
F M NIIHIDEKWF +KK + +YL PDE++P+ + +KN + KVMFL VA PRFD
Sbjct: 299 KFIEMENIIHIDEKWFNGSKKEKTFYLYPDEEEPYFTVHNKNAIDKVMFLAAVANPRFDD 358
Query: 125 EKNVTFSGKIGIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKE 184
E N TF GKI I+PFV +EPA+R S NR GT+ TK I ++R+ IRSF+I KVLPA +
Sbjct: 359 EGNCTFDGKICIWPFVRKEPAQRRSRNRERGTLVTKPI-KVDRNTIRSFMISKVLPAIRA 417
Query: 185 VWLRDELGSTIFIQQDNARTHINPNDPEFIQAATQDGFDIRLMCQPPNSPDFNVLDLGFF 244
W R++ G TI+IQQDNARTH+ ND +F A Q G DIRL+ QPPNSPD N LDLGFF
Sbjct: 418 CWPREDAGKTIWIQQDNARTHLPINDEQFAVAVAQTGLDIRLVNQPPNSPDMNCLDLGFF 477
Query: 245 SAIQSLHYKEAPKTIDELVNAVVKSFEN 272
+++QSL Y + +DEL+ V K + +
Sbjct: 478 ASLQSLTYNRTSRNMDELIENVHKEYRD 505
>gb|AAP53116.1| putative transposable element [Oryza sativa (japonica
cultivar-group)] gi|37533054|ref|NP_920829.1| putative
transposable element [Oryza sativa (japonica
cultivar-group)] gi|15451589|gb|AAK98713.1| Putative
transposable element [Oryza sativa]
Length = 397
Score = 266 bits (680), Expect = 7e-70
Identities = 131/241 (54%), Positives = 175/241 (72%), Gaps = 2/241 (0%)
Query: 43 EEGKRLRLEFCLSMLE--GIPHDPMFKSMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHR 100
++ K RL++C+ ML+ +PH+P+FK +++ I I EKWF +T+K+ +YY P + R
Sbjct: 150 DQNKIDRLKWCIEMLDPRSVPHNPVFKPLFDYIFIYEKWFNITRKTVQYYAAPTASRRIR 209
Query: 101 SCKSKNFVPKVMFLTVVARPRFDSEKNVTFSGKIGIFPFVTQEPAKRTSVNRVAGTMETK 160
++KNF+PK+M LT +ARPRFDS N F GKIG FPFVT AKR+SVN AGT+E K
Sbjct: 210 IIQNKNFIPKIMILTALARPRFDSNGNCIFDGKIGCFPFVTYTAAKRSSVNHPAGTIEMK 269
Query: 161 AITSINRDLIRSFLIEKVLPATKEVWLRDELGSTIFIQQDNARTHINPNDPEFIQAATQD 220
I SI +++IRSF IEKVLPA + W R++ G I+IQQDNAR HI P+D F +AA QD
Sbjct: 270 PIESITKEVIRSFKIEKVLPAVRAKWPREDAGKPIYIQQDNARPHIAPDDRMFCEAAKQD 329
Query: 221 GFDIRLMCQPPNSPDFNVLDLGFFSAIQSLHYKEAPKTIDELVNAVVKSFENYCVVKSNF 280
GF+I+L+CQP NSPD NVLDLGFF++IQS+ YK A T +ELV A+ ++FE+Y V SN
Sbjct: 330 GFNIKLVCQPANSPDLNVLDLGFFNSIQSIQYKSASTTTEELVAAIDRAFEDYPVRLSNM 389
Query: 281 I 281
I
Sbjct: 390 I 390
>gb|AAL69349.1| transposase [Glycine max]
Length = 128
Score = 251 bits (640), Expect = 3e-65
Identities = 124/128 (96%), Positives = 124/128 (96%)
Query: 75 IDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDSEKNVTFSGKI 134
IDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLT VARPRFDSEKNVTFSGKI
Sbjct: 1 IDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTAVARPRFDSEKNVTFSGKI 60
Query: 135 GIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKEVWLRDELGST 194
GIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRS IEKVLPATKEVW RDELGST
Sbjct: 61 GIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSVFIEKVLPATKEVWPRDELGST 120
Query: 195 IFIQQDNA 202
IFIQQDNA
Sbjct: 121 IFIQQDNA 128
>emb|CAE01628.2| OSJNBa0029H02.9 [Oryza sativa (japonica cultivar-group)]
gi|50926093|ref|XP_473053.1| OSJNBa0029H02.9 [Oryza
sativa (japonica cultivar-group)]
Length = 442
Score = 250 bits (638), Expect = 5e-65
Identities = 126/221 (57%), Positives = 165/221 (74%), Gaps = 3/221 (1%)
Query: 82 MTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDSEKNVTFSGKIGIFPFVT 141
MTK+ + YYLLP+E+ P R+ ++KN + KVMFLT +ARPRFD E NVTFSGKIG +PFV
Sbjct: 187 MTKRKKTYYLLPEEEDPLRTVQNKNRIGKVMFLTAIARPRFDEEGNVTFSGKIGTWPFVK 246
Query: 142 QEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKEVWLRDELGSTIFIQQDN 201
+ PA R S NR GT+ETK+I +NRD++R FLIEKV+PA + +W +++G TI+IQQDN
Sbjct: 247 EVPAIRKSRNRTIGTLETKSII-VNRDVMRQFLIEKVIPAIQSLWPEEDIGDTIYIQQDN 305
Query: 202 ARTHINPNDPEFIQAATQDGFDIRLMCQPPNSPDFNVLDLGFFSAIQSLHYKEAPKTIDE 261
ARTH+ PNDP F+QA G +I+L QP NSPD NVLDLGFFS+IQSL +PKTI E
Sbjct: 306 ARTHVPPNDPHFLQAVAATGLNIQLK-QPSNSPDMNVLDLGFFSSIQSLTNCSSPKTIQE 364
Query: 262 LVNAVVKSFENYCVVKSNFIFLSLQLCMIH-DRDNESQRFQ 301
L++AV + F+ Y K N +FL+LQLCM+ +DN R++
Sbjct: 365 LIHAVQEEFDGYEASKINRVFLTLQLCMLEVMKDNGGNRYK 405
>ref|XP_493795.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 330
Score = 247 bits (631), Expect = 3e-64
Identities = 124/243 (51%), Positives = 171/243 (70%), Gaps = 3/243 (1%)
Query: 7 VRTLVVAMNTNTSAVYRLIL*GAIQRHSSAIKPQLTEEGKRLRLEFCLSMLEG--IPHDP 64
+R+L A+ + S ++R G I+RHS+++KP L E K+ RL++C+SML+ +P++P
Sbjct: 89 IRSLAQALGVSKSTLHRWFKEGLIRRHSNSLKPYLKEANKKERLQWCVSMLDPHTLPNNP 148
Query: 65 MFKSMYNIIHIDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDS 124
F M NIIHIDEKWF +KK + +YL P E +P+ + +KN + KVMFL+ VA+PR+
Sbjct: 149 KFIEMENIIHIDEKWFNASKKEKTFYLYPGEKEPYFTVHNKNAIDKVMFLSAVAKPRYGD 208
Query: 125 EKNVTFSGKIGIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKE 184
E N TF GKIGI+PF +EPA+R S NR GT+ TK I ++RD IRSF+I KVLPA +
Sbjct: 209 EGNCTFDGKIGIWPFTRKEPAQRRSRNRERGTLVTKLI-KVDRDTIRSFMISKVLPAIRA 267
Query: 185 VWLRDELGSTIFIQQDNARTHINPNDPEFIQAATQDGFDIRLMCQPPNSPDFNVLDLGFF 244
W R++ TI+IQQDNARTH+ +D +F A Q G DIRL+ QPPNSPD N LDLGFF
Sbjct: 268 CWPREDARKTIWIQQDNARTHLTIDDAQFGVAVAQTGLDIRLVNQPPNSPDMNCLDLGFF 327
Query: 245 SAI 247
+++
Sbjct: 328 ASL 330
>gb|AAM97157.1| transposon protein, putative, mariner sub-class [Oryza sativa
(japonica cultivar-group)] gi|50918137|ref|XP_469465.1|
putative transposase [Oryza sativa (japonica
cultivar-group)]
Length = 437
Score = 226 bits (576), Expect = 8e-58
Identities = 122/276 (44%), Positives = 168/276 (60%), Gaps = 28/276 (10%)
Query: 15 NTNTSAVYRLIL*GAIQRHSSAIKPQLTEEGKRLRLEFCLSMLEGIPHDPMFKSMYNIIH 74
N A+Y +L G ++ +SA+ P +P++P F M NI+H
Sbjct: 140 NIQRQAIYDALLRGTLRSFASALDPHT------------------LPNEPKFVDMRNIVH 181
Query: 75 IDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDSEKNVTFSGKI 134
IDEKWF TKK+ +Y++ ED +R ++ N + KVMFL VARPR++ E TF+GK
Sbjct: 182 IDEKWFNTTKKTRNFYMVHWEDDLYRPVQNNNSIDKVMFLAAVARPRYNEEGICTFNGK- 240
Query: 135 GIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKEVWLRDELGST 194
EPA+RTS NR GT+ TK I ++RD +RSFLI KVL A W R+ +T
Sbjct: 241 --------EPAQRTSQNRPRGTLVTKTI-KVDRDTVRSFLIAKVLQAIISCWPREHAHNT 291
Query: 195 IFIQQDNARTHINPNDPEFIQAATQDGFDIRLMCQPPNSPDFNVLDLGFFSAIQSLHYKE 254
I IQQDNA +H+ +DP+F A +Q GFDIRLM QPPNSPD N LDLGFF+++QSL Y+
Sbjct: 292 ILIQQDNAPSHVLVDDPQFAYAVSQTGFDIRLMNQPPNSPDMNALDLGFFASLQSLTYRR 351
Query: 255 APKTIDELVNAVVKSFENYCVVKSNFIFLSLQLCMI 290
+ +DEL++ V + F Y K N +FL+LQ C++
Sbjct: 352 ISRNMDELIDNVEQEFHAYDDSKLNRVFLTLQSCLL 387
>gb|AAL69354.1| transposase [Zea diploperennis]
Length = 127
Score = 180 bits (457), Expect = 5e-44
Identities = 89/128 (69%), Positives = 102/128 (79%), Gaps = 1/128 (0%)
Query: 75 IDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDSEKNVTFSGKI 134
IDEKWF++T+KSERYYLLPDED PHR+CKSKN +PK+MFL +RPRF++ TF GKI
Sbjct: 1 IDEKWFFLTRKSERYYLLPDEDDPHRTCKSKNNIPKLMFLCATSRPRFENGV-CTFDGKI 59
Query: 135 GIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKEVWLRDELGST 194
G FP VT E AKR+SVNR AGTME K ITSI RD+IR FLIEKVLPA + W RDEL
Sbjct: 60 GCFPLVTFERAKRSSVNRPAGTMEVKPITSIKRDVIREFLIEKVLPAIRAKWPRDELNKP 119
Query: 195 IFIQQDNA 202
I+IQQDNA
Sbjct: 120 IYIQQDNA 127
>gb|AAL69350.1| transposase [Tripsacum pilosum]
Length = 128
Score = 175 bits (444), Expect = 2e-42
Identities = 84/128 (65%), Positives = 100/128 (77%)
Query: 75 IDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDSEKNVTFSGKI 134
IDEKWFY+T+KSE YY++PDE PHR+CKSKN +PK+MFLTVVARPRFDS F GKI
Sbjct: 1 IDEKWFYLTRKSEGYYVMPDEYVPHRTCKSKNNIPKIMFLTVVARPRFDSNGVCIFDGKI 60
Query: 135 GIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKEVWLRDELGST 194
G FP VT EPAKR+SVNR AGTME K I SI +++IR F+I+KVLPA + W ++
Sbjct: 61 GCFPLVTYEPAKRSSVNRPAGTMEIKPIPSITKEVIRDFMIQKVLPAIRAKWPVEDRNKP 120
Query: 195 IFIQQDNA 202
IFIQQDNA
Sbjct: 121 IFIQQDNA 128
>gb|AAL69335.1| transposase [Arundinaria simonii]
Length = 128
Score = 168 bits (425), Expect = 2e-40
Identities = 79/128 (61%), Positives = 99/128 (76%)
Query: 75 IDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDSEKNVTFSGKI 134
IDEKWFY T+K ++YYL +E++P R+ KSKNF+ KVMFL +ARPRFD + N TFSGKI
Sbjct: 1 IDEKWFYRTRKCQKYYLALEEERPQRTVKSKNFIEKVMFLAAIARPRFDVDGNETFSGKI 60
Query: 135 GIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKEVWLRDELGST 194
GIFPF + EPAKRTS NR GTM TKA+TS+ ++ R++L+ KVLPA KE W ++ S
Sbjct: 61 GIFPFTSTEPAKRTSANRPRGTMVTKAMTSVTKETSRAYLVNKVLPAIKEKWPLEDRESP 120
Query: 195 IFIQQDNA 202
IFIQQDNA
Sbjct: 121 IFIQQDNA 128
>gb|AAL69339.1| transposase [Cynodon dactylon]
Length = 128
Score = 167 bits (422), Expect = 5e-40
Identities = 76/128 (59%), Positives = 99/128 (76%)
Query: 75 IDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDSEKNVTFSGKI 134
IDEKWF +T+K+ERYY +PDE++P R+CKSKN +PK+M L+ VARP FDS+ N TF GKI
Sbjct: 1 IDEKWFNITRKNERYYAVPDEEQPERTCKSKNHIPKLMILSAVARPSFDSQGNCTFDGKI 60
Query: 135 GIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKEVWLRDELGST 194
G FPF+ E AKR+SVNR GT+E K + S+ +D+IR ++IEKVLPA + W ++ T
Sbjct: 61 GCFPFIRFEAAKRSSVNRPVGTIEMKPLDSVTKDVIREYMIEKVLPAIRSKWPAEDAHKT 120
Query: 195 IFIQQDNA 202
IFIQQDNA
Sbjct: 121 IFIQQDNA 128
>gb|AAL69348.1| transposase [Iris x nelsonii] gi|18419515|gb|AAL69347.1|
transposase [Iris fulva]
Length = 128
Score = 166 bits (421), Expect = 7e-40
Identities = 80/128 (62%), Positives = 98/128 (76%)
Query: 75 IDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDSEKNVTFSGKI 134
IDEKWFYMTKK+E YYL P E+ P R+C+SKN++ KVMFL +ARPRFD+E FSGKI
Sbjct: 1 IDEKWFYMTKKTETYYLHPMEEDPLRTCQSKNYIGKVMFLAAMARPRFDNEGKKVFSGKI 60
Query: 135 GIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKEVWLRDELGST 194
GIFPFVT + AK+ S N GT+E K ITS+ R+ I+SFLIEKV+P E+WL ++ T
Sbjct: 61 GIFPFVTMQTAKKRSKNIEVGTLEIKPITSVKRENIKSFLIEKVIPKIHEMWLEEDSRKT 120
Query: 195 IFIQQDNA 202
IFIQQDNA
Sbjct: 121 IFIQQDNA 128
>gb|AAL69340.1| transposase [Pariana radiciflora]
Length = 128
Score = 166 bits (421), Expect = 7e-40
Identities = 77/128 (60%), Positives = 98/128 (76%)
Query: 75 IDEKWFYMTKKSERYYLLPDEDKPHRSCKSKNFVPKVMFLTVVARPRFDSEKNVTFSGKI 134
IDEKWFY TKK++ YYL DE P RS ++KNF+ K+MFL +ARPR+D E NVTFSGKI
Sbjct: 1 IDEKWFYRTKKNQTYYLANDEPDPERSTQNKNFIEKIMFLAGIARPRYDGEGNVTFSGKI 60
Query: 135 GIFPFVTQEPAKRTSVNRVAGTMETKAITSINRDLIRSFLIEKVLPATKEVWLRDELGST 194
GIFPF+ EPAKR+SVNR AGT+ TK + S+ +++ R +++ KVLPA K+ W +E G
Sbjct: 61 GIFPFIFIEPAKRSSVNRPAGTLVTKVLPSVTKEISREYIVSKVLPAIKDKWPAEECGLP 120
Query: 195 IFIQQDNA 202
IFIQQDNA
Sbjct: 121 IFIQQDNA 128
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.327 0.140 0.415
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 529,102,386
Number of Sequences: 2540612
Number of extensions: 21110427
Number of successful extensions: 51407
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 51315
Number of HSP's gapped (non-prelim): 76
length of query: 339
length of database: 863,360,394
effective HSP length: 128
effective length of query: 211
effective length of database: 538,162,058
effective search space: 113552194238
effective search space used: 113552194238
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 75 (33.5 bits)
Medicago: description of AC136138.6