BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC134242.10 + phase: 0
(164 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis] 266 2e-70
gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula] 265 3e-70
gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus... 263 1e-69
gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x... 260 8e-69
dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu] 259 1e-68
gb|AAD48471.1| glycine-rich RNA-binding protein [Glycine max] 257 7e-68
sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A gi|4... 256 2e-67
pir||S59529 RNA-binding glycine-rich protein-1 (RGP-1c) - wood t... 256 2e-67
sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A gi|4... 255 3e-67
pir||S41773 glycine-rich RNA-binding protein RGP-1c - wood tobacco 251 5e-66
gb|AAF31404.1| putative glycine-rich RNA-binding protein 2 [Cath... 250 9e-66
pir||S41771 glycine-rich RNA-binding protein RGP-1a - wood tobac... 248 3e-65
gb|AAF31403.1| putative glycine-rich RNA binding protein 3 [Cath... 248 3e-65
emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana] gi|4... 248 6e-65
gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia esula] 246 2e-64
gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa] 246 2e-64
gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis t... 244 8e-64
ref|NP_850017.1| glycine-rich RNA-binding protein (GRP7) [Arabid... 243 1e-63
emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius] 242 3e-63
gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza... 241 4e-63
>emb|CAC80549.1| glycine-rich RNA-binding protein [Ricinus communis]
Length = 165
Score = 266 bits (679), Expect = 2e-70
Identities = 132/169 (78%), Positives = 143/169 (84%), Gaps = 9/169 (5%)
Query: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
MA+AD+EYRCFVGGLAWAT +ALE+AFS YGE+++SKIINDRETGRSRGFGFVTF +EK
Sbjct: 1 MAAADIEYRCFVGGLAWATSDKALEEAFSAYGEVLESKIINDRETGRSRGFGFVTFNNEK 60
Query: 61 SMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGGRGGGGYGGGGGGYGGGGRREGGYNRS 120
SMRDAIEGMNGQ++DGRNITVNEAQSRG GGG GGGGY GGGG GGGRREGGY
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQSRGGGGG---GGGGYRNGGGGGYGGGRREGGYGGG 117
Query: 121 SG---GGGGYGGGGGGGYGGGRDRGY--GDDGGSRYSRGGGGDGGSWRS 164
G GGGGY GGGGGGYGGGRDRGY G DGGSRYSRGGG G+WRS
Sbjct: 118 GGYSRGGGGY-GGGGGGYGGGRDRGYGGGGDGGSRYSRGGGASEGNWRS 165
>gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 265 bits (678), Expect = 3e-70
Identities = 128/166 (77%), Positives = 142/166 (85%), Gaps = 7/166 (4%)
Query: 3 SADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSM 62
SAD+EYRCFVGGLAWAT ++L++AFS YGEI+DSKIINDRETGRSRGFGFVTF +EKSM
Sbjct: 2 SADIEYRCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSM 61
Query: 63 RDAIEGMNGQDMDGRNITVNEAQSRGSGGGGGRGGGGYGGGGGGYGGGGRREGGYNRSSG 122
RDAI+GMN Q++DGRNITVNEAQSRGSGGGGG GG GGGGGGYGGGGRREGGY G
Sbjct: 62 RDAIQGMNSQELDGRNITVNEAQSRGSGGGGGGGGYSRGGGGGGYGGGGRREGGY---GG 118
Query: 123 GGGGY---GGGGGGGYGGGRDRGY-GDDGGSRYSRGGGGDGGSWRS 164
GGGGY GGGGGYGGGRD+GY G GGSRYSRGGG G+W++
Sbjct: 119 GGGGYNSRSSGGGGGYGGGRDQGYGGGGGGSRYSRGGGESDGNWKN 164
>gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 263 bits (673), Expect = 1e-69
Identities = 134/179 (74%), Positives = 152/179 (84%), Gaps = 16/179 (8%)
Query: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
MASA++E+RCFVGGLAWATD++ALE+AFS +GEII+SKIINDRETGRSRGFGFVTF++EK
Sbjct: 1 MASAEIEFRCFVGGLAWATDNDALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEK 60
Query: 61 SMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGGRGGGGYG--------GGGGGYGGGGR 112
+MRDAIEGMNGQ++DGRNITVNEAQSRGSGGGGG GGGY GGGGGYGGGGR
Sbjct: 61 AMRDAIEGMNGQNLDGRNITVNEAQSRGSGGGGGGNGGGYSRGGGGGGYGGGGGYGGGGR 120
Query: 113 RE---GGYNRSSGGGGGYGGGGGG-GYGGGRDRGY--GDDGGSRYSRG-GGGDGGSWRS 164
RE GGY+R GGGGGYG GGGG G GG R+ GY G+ GG+RYSRG GG +GGSWRS
Sbjct: 121 REGGGGGYSR-GGGGGGYGSGGGGYGGGGRREGGYGGGEGGGARYSRGSGGSEGGSWRS 178
>gb|AAB63582.1| glycine-rich RNA binding protein 2 [Pelargonium x hortorum]
gi|2267567|gb|AAB63581.1| glycine-rich RNA binding
protein 1 [Pelargonium x hortorum]
Length = 166
Score = 260 bits (665), Expect = 8e-69
Identities = 137/174 (78%), Positives = 147/174 (83%), Gaps = 18/174 (10%)
Query: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
MASADVEYRCFVGGLAWATD ALE+AFSQYGE+++SKIINDRETGRSRGFGFVTF++EK
Sbjct: 1 MASADVEYRCFVGGLAWATDDHALEQAFSQYGEVVESKIINDRETGRSRGFGFVTFSNEK 60
Query: 61 SMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGGR----GGGGYG--GGGGGY--GGGGR 112
SM DAIEGMNGQ++DGRNITVNEAQSRGSGGGGGR GGGGYG GGGGY GGGG
Sbjct: 61 SMNDAIEGMNGQNLDGRNITVNEAQSRGSGGGGGRREGGGGGGYGRREGGGGYSRGGGG- 119
Query: 113 REGGYNRSSGGGGGYGGGGGGGYGGGRD-RGYGDD-GGSRYSRGGGGDGGSWRS 164
GGY GGGGGYGGG GGGYGGGR+ RGYGD GGSRYSR DGG+WRS
Sbjct: 120 --GGY---GGGGGGYGGGNGGGYGGGREQRGYGDSGGGSRYSR--DSDGGNWRS 166
>dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 259 bits (663), Expect = 1e-68
Identities = 133/176 (75%), Positives = 142/176 (80%), Gaps = 21/176 (11%)
Query: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
MASADVE+RCFVGGLAWAT +L +AFS YG+I++SKIINDRETGRSRGFGFVTF DEK
Sbjct: 1 MASADVEFRCFVGGLAWATTDSSLHEAFSAYGDILESKIINDRETGRSRGFGFVTFRDEK 60
Query: 61 SMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGGRGGGGYGG-GGGGYGGGGRREGGYNR 119
SMRDAIEGMNGQ++DGRNITVNEAQSRGSGGG GGGGYG GGGGYGGGGRRE
Sbjct: 61 SMRDAIEGMNGQNLDGRNITVNEAQSRGSGGG---GGGGYGSRGGGGYGGGGRRE----- 112
Query: 120 SSGGGGGYG-----GGGGGGYGG------GRDRGYGDDGGSRYSRGGGGDGGSWRS 164
SGGGGGYG GGGGGGYGG RD GYG DGGSRYSR G DGGSWR+
Sbjct: 113 -SGGGGGYGGSRGYGGGGGGYGGRREGGYSRDGGYGGDGGSRYSRSGASDGGSWRN 167
>gb|AAD48471.1| glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 257 bits (657), Expect = 7e-68
Identities = 127/168 (75%), Positives = 136/168 (80%), Gaps = 12/168 (7%)
Query: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
MASADVEYRCFVGGLAWATD ALE+AFSQYGEI+++KIINDRETGRSRGFGFVTFA E+
Sbjct: 1 MASADVEYRCFVGGLAWATDDHALERAFSQYGEIVETKIINDRETGRSRGFGFVTFASEQ 60
Query: 61 SMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGGRGGGGYGGGGGGYG---GGGRREGGY 117
SM+DAI MNGQ++DGRNITVNEAQSRG GGGGG GGGGY GGGGYG GGG GGY
Sbjct: 61 SMKDAIGAMNGQNLDGRNITVNEAQSRGGGGGGGGGGGGYNRGGGGYGGRSGGGGGGGGY 120
Query: 118 NRSSGG-GGGYGGGGGGGYGGGRDRGYGDDGGSRYSRGGGGDGGSWRS 164
GG GGGYGGGGGGGYGGGRDRG YSRGG G G WR+
Sbjct: 121 RSRDGGYGGGYGGGGGGGYGGGRDRG--------YSRGGDGGDGGWRN 160
>sp|P49310|GRP1_SINAL Glycine-rich RNA-binding protein GRP1A gi|496233|gb|AAA59212.1|
homology with RNA-binding proteins in meristematic
tissue
Length = 166
Score = 256 bits (654), Expect = 2e-67
Identities = 132/174 (75%), Positives = 138/174 (78%), Gaps = 20/174 (11%)
Query: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
MAS DVEYRCFVGGLAWATD ALE AFSQYGE++DSKIINDRETGRSRGFGFVTF DEK
Sbjct: 1 MASPDVEYRCFVGGLAWATDDRALETAFSQYGEVLDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 61 SMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGG----------RGGGGYGGGGGGYGGG 110
SM+DAIEGMNGQD+DGR+ITVNEAQSRGSGGGGG GGGGYGGGGGGYGGG
Sbjct: 61 SMKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGGRGGGGGYRSGGGGGYGGGGGGYGGG 120
Query: 111 GRREGGYNRSSGGGGGYG--GGGGGGYGGGRDRGYGDDGGSRYSRGGGGDGGSW 162
G REGGY SGGGGGY GGGGGGYGGG R G+ GG GG G GG W
Sbjct: 121 G-REGGY---SGGGGGYSSRGGGGGGYGGGGRRDGGEGGG----YGGSGGGGGW 166
>pir||S59529 RNA-binding glycine-rich protein-1 (RGP-1c) - wood tobacco
gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich
protein-1 (RGP-1c) [Nicotiana sylvestris]
Length = 165
Score = 256 bits (653), Expect = 2e-67
Identities = 129/168 (76%), Positives = 137/168 (80%), Gaps = 11/168 (6%)
Query: 4 ADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMR 63
A+VEYRCFVGGLAWAT L +AFSQYGE+++SKIINDRETGRSRGFGFVTF DEKSMR
Sbjct: 2 AEVEYRCFVGGLAWATTDRTLGEAFSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMR 61
Query: 64 DAIEGMNGQDMDGRNITVNEAQSRGSGGGGGRGG--GGYGGGGGGYGGGGRREGGYNRSS 121
DAIEGMNGQD+DGRNITVNEAQSRGSGGGGG GG GG GGGGYGGGG G R
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQSRGSGGGGGGGGFRGGRREGGGGYGGGGY---GGGRRE 118
Query: 122 GGGGGYGGGGGG-----GYGGGRDRGYGDDGGSRYSRGGGGDGGSWRS 164
GGGGGYGGGG G GYGGG DRGYG DGGSRYSRGGG G+WR+
Sbjct: 119 GGGGGYGGGGYGGGRDRGYGGG-DRGYGGDGGSRYSRGGGDSDGNWRN 165
>sp|P49311|GRP2_SINAL Glycine-rich RNA-binding protein GRP2A gi|496237|gb|AAA59213.1|
homology with RNA-binding proteins in meristematic
tissue
Length = 169
Score = 255 bits (651), Expect = 3e-67
Identities = 128/172 (74%), Positives = 135/172 (78%), Gaps = 13/172 (7%)
Query: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
MAS DVEYRCFVGGLAWATD +LE AFSQ+GE++DSKIINDRETGRSRGFGFVTF DEK
Sbjct: 1 MASPDVEYRCFVGGLAWATDERSLETAFSQFGELVDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 61 SMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGG--------RGGGGYGGGGGGYGGGGR 112
SM+DAIEGMNGQD+DGR+ITVNEAQSRGSG GGG RGGGGYGGGGGGYGGG R
Sbjct: 61 SMKDAIEGMNGQDLDGRSITVNEAQSRGSGAGGGGRGGGGGYRGGGGYGGGGGGYGGGRR 120
Query: 113 REGGYNRSSGGGGGYG--GGGGGGYGGGRDRGYGDDGGSRYSRGGGGDGGSW 162
GGY SGGGGGY GGGGGGYGGG R G GG GGG GG W
Sbjct: 121 EGGGY---SGGGGGYSSRGGGGGGYGGGGRRDGGGYGGGEGGGYGGGGGGGW 169
>pir||S41773 glycine-rich RNA-binding protein RGP-1c - wood tobacco
Length = 165
Score = 251 bits (641), Expect = 5e-66
Identities = 127/168 (75%), Positives = 135/168 (79%), Gaps = 11/168 (6%)
Query: 4 ADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMR 63
A+VEY CFVGGLAWAT L +AFS YGE+++SKIINDRETGRSRGFGFVTF DEKSMR
Sbjct: 2 AEVEYSCFVGGLAWATTDRTLGEAFSTYGEVLESKIINDRETGRSRGFGFVTFGDEKSMR 61
Query: 64 DAIEGMNGQDMDGRNITVNEAQSRGSGGGGGRGG--GGYGGGGGGYGGGGRREGGYNRSS 121
DAIEGMNGQD+DGRNITVNEAQSRGSGGGGG GG GG GGGGYGGGG G R
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQSRGSGGGGGGGGFRGGRREGGGGYGGGGY---GGGRRE 118
Query: 122 GGGGGYGGGGGG-----GYGGGRDRGYGDDGGSRYSRGGGGDGGSWRS 164
GGGGGYGGGG G GYGGG DRGYG DGGSRYSRGGG G+WR+
Sbjct: 119 GGGGGYGGGGYGGGRDRGYGGG-DRGYGGDGGSRYSRGGGDSDGNWRN 165
>gb|AAF31404.1| putative glycine-rich RNA-binding protein 2 [Catharanthus roseus]
Length = 160
Score = 250 bits (639), Expect = 9e-66
Identities = 128/169 (75%), Positives = 142/169 (83%), Gaps = 14/169 (8%)
Query: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
MASADVE+RCFVGGLAWAT ++L +AFSQYGE+++SK+INDRETGRSRGFGFVTF DEK
Sbjct: 1 MASADVEFRCFVGGLAWATTDQSLSEAFSQYGEVLESKVINDRETGRSRGFGFVTFGDEK 60
Query: 61 SMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGGRGGGGYGG----GGGGYGGGGRREGG 116
SM+DAI GMNGQ +DGRNITVNEAQSRGSGGGG GGGG+ G GGGGYGGGGRR+GG
Sbjct: 61 SMKDAIVGMNGQTLDGRNITVNEAQSRGSGGGG--GGGGFRGPRREGGGGYGGGGRRDGG 118
Query: 117 YNRSSGGGGGYGGG-GGGGYGGGRDRGYGDDGGSRYSRGGGGDGGSWRS 164
Y G GGGYGGG GGYGGG DRGYG GG RYSRGGG D G+WR+
Sbjct: 119 Y---GGNGGGYGGGRRDGGYGGG-DRGYG--GGDRYSRGGGSD-GNWRN 160
>pir||S41771 glycine-rich RNA-binding protein RGP-1a - wood tobacco
gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich
protein-1 (RGP-1a) [Nicotiana sylvestris]
Length = 156
Score = 248 bits (634), Expect = 3e-65
Identities = 126/162 (77%), Positives = 134/162 (81%), Gaps = 8/162 (4%)
Query: 4 ADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMR 63
A+VEYRCFVGGLAWAT + L +AFSQ+GEI+DSKIINDRETGRSRGFGFVTF DEK+MR
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGEAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMR 61
Query: 64 DAIEGMNGQDMDGRNITVNEAQSRGSGGGGGRGGGGYGGGGGGYGGGGRREGGYNRSSGG 123
DAIEGMNGQD+DGRNITVNEAQSRGSGGGGG GGG GG GGGYGGGGRREGGY GG
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQSRGSGGGGG-GGGYRGGSGGGYGGGGRREGGY----GG 116
Query: 124 GGGYGGG-GGGGYGGGRDRGYGDDGGSRYSRGGGGDGGSWRS 164
GGGYGGG GGYGGG GYG GG R GGG G+WRS
Sbjct: 117 GGGYGGGRREGGYGGGGGGGYG--GGRREGGYGGGSEGNWRS 156
>gb|AAF31403.1| putative glycine-rich RNA binding protein 3 [Catharanthus roseus]
Length = 164
Score = 248 bits (634), Expect = 3e-65
Identities = 130/170 (76%), Positives = 140/170 (81%), Gaps = 12/170 (7%)
Query: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
MASADVEYRCFVGGLAWAT ++L +AFSQYGEI++SKIINDRETGRSRGFGFVTF DE+
Sbjct: 1 MASADVEYRCFVGGLAWATTDQSLSEAFSQYGEILESKIINDRETGRSRGFGFVTFKDEQ 60
Query: 61 SMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGG---RGGGGYGGGGGGYGGGGRREGGY 117
SMRDAIEGMNGQ +DGRNITVNEAQSRGSGG GG RG GGGGGGY GGGRR+GGY
Sbjct: 61 SMRDAIEGMNGQTLDGRNITVNEAQSRGSGGNGGGGFRGPRRDGGGGGGY-GGGRRDGGY 119
Query: 118 NRSSGGGGGYGGG-GGGGYGGGRDRGY--GDDGGSRYSRGGGGDGGSWRS 164
GG GGYGGG GGYGGG DRGY G GGSRYSRGGG G+WR+
Sbjct: 120 ----GGNGGYGGGRREGGYGGG-DRGYGGGGGGGSRYSRGGGASDGNWRN 164
>emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding
protein 7 [Arabidopsis thaliana]
gi|16226372|gb|AAL16149.1| At2g22292/F2G1.7_
[Arabidopsis thaliana] gi|15810032|gb|AAL06943.1|
At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|544424|sp|Q03250|GRP7_ARATH Glycine-rich RNA-binding
protein 7 gi|15226605|ref|NP_179760.1| glycine-rich
RNA-binding protein (GRP7) [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein
Length = 176
Score = 248 bits (632), Expect = 6e-65
Identities = 125/176 (71%), Positives = 133/176 (75%), Gaps = 14/176 (7%)
Query: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
MAS DVEYRCFVGGLAWATD ALE AF+QYG++IDSKIINDRETGRSRGFGFVTF DEK
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 61 SMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGGR-----------GGGGYGGGGGGYGG 109
+M+DAIEGMNGQD+DGR+ITVNEAQSRGSGGGGG GGGGY GGGG YGG
Sbjct: 61 AMKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGG 120
Query: 110 GGRREGGYNRSSGGGGGYG--GGGGGGYGGG-RDRGYGDDGGSRYSRGGGGDGGSW 162
GG R G SGGGGGY GGGGG YGGG R+ G G GG GG G GG W
Sbjct: 121 GGGRREGGGGYSGGGGGYSSRGGGGGSYGGGRREGGGGYGGGEGGGYGGSGGGGGW 176
>gb|AAC61787.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 165
Score = 246 bits (628), Expect = 2e-64
Identities = 122/167 (73%), Positives = 136/167 (81%), Gaps = 8/167 (4%)
Query: 3 SADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSM 62
SAD+EYRCFVGGLAWAT ++L++AFS YGEI+DSKIINDRETGRSRGFGFVTF +EKSM
Sbjct: 2 SADIEYRCFVGGLAWATTDQSLQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSM 61
Query: 63 RDAIEGMNGQDMDGRNITVNEAQSRGSGGGGGRGGGGYGGGGGGYG-GGGRREGGYNRSS 121
RDAI+GMN Q++DGRN TVNEAQSRG+G GG GG GGGGGGYG GGGRRE GY
Sbjct: 62 RDAIQGMNSQELDGRNTTVNEAQSRGNGRSGGGGGYSRGGGGGGYGSGGGRRERGY---G 118
Query: 122 GGGGGYGG---GGGGGYGGGRDRGYGD-DGGSRYSRGGGGDGGSWRS 164
GGGGGY GG GGYGGGRD+GYG GGSRYS GGG G+WR+
Sbjct: 119 GGGGGYNSISTGGSGGYGGGRDQGYGSGGGGSRYSTGGGESDGNWRN 165
>gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 246 bits (628), Expect = 2e-64
Identities = 125/162 (77%), Positives = 133/162 (81%), Gaps = 8/162 (4%)
Query: 4 ADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMR 63
A+VEYRCFVGGLAWAT + L AFSQYGEI+DSKIINDRETGRSRGFGFVTF DE++MR
Sbjct: 2 AEVEYRCFVGGLAWATTDQTLGDAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMR 61
Query: 64 DAIEGMNGQDMDGRNITVNEAQSRGSGGGGGRGGGGYGGGGGGYGGGGRREGGYNRSSGG 123
DAIEGMNGQD+DGRNITVNEAQSRGSGGGGG GG GGGGGGYGGGGRREGGY GG
Sbjct: 62 DAIEGMNGQDLDGRNITVNEAQSRGSGGGGGGYRGGRGGGGGGYGGGGRREGGY---GGG 118
Query: 124 GGGYGGG-GGGGYGGGRDRGYGDDGGSRYSRGGGGDGGSWRS 164
GGGYGGG GGYGGG GYG GG R GGG G+WR+
Sbjct: 119 GGGYGGGRREGGYGGG--GGYG--GGRREGGYGGGSEGNWRN 156
>gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 244 bits (622), Expect = 8e-64
Identities = 124/175 (70%), Positives = 132/175 (74%), Gaps = 13/175 (7%)
Query: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
MAS DVEYRCFVGGLAWATD ALE AF+QYG++IDSKIINDRETGRSRGFGFVTF DEK
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 61 SMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGGR-----------GGGGYGGGGGGY-G 108
+M+DAIEGMNGQD+DGR+ITVNEAQSRGSGGGGG GGGGY GGGG Y G
Sbjct: 61 AMKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGGGGYRSGGGGGYSGGGGSYGG 120
Query: 109 GGGRREGGYNRSSGGGGGYGGGGGGGYGGG-RDRGYGDDGGSRYSRGGGGDGGSW 162
GGGRREGG S GGG G GGG YGGG R+ G G GG GG G GG W
Sbjct: 121 GGGRREGGGGYSGGGGYSSRGXGGGSYGGGRREGGGGYGGGEGGGYGGSGGGGGW 175
>ref|NP_850017.1| glycine-rich RNA-binding protein (GRP7) [Arabidopsis thaliana]
Length = 159
Score = 243 bits (621), Expect = 1e-63
Identities = 124/166 (74%), Positives = 132/166 (78%), Gaps = 18/166 (10%)
Query: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
MAS DVEYRCFVGGLAWATD ALE AF+QYG++IDSKIINDRETGRSRGFGFVTF DEK
Sbjct: 1 MASGDVEYRCFVGGLAWATDDRALETAFAQYGDVIDSKIINDRETGRSRGFGFVTFKDEK 60
Query: 61 SMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGG-RGGGGYGG------GGGGYGGGGRR 113
+M+DAIEGMNGQD+DGR+ITVNEAQSRGSGGGGG RGGG YGG GGGGY GGG
Sbjct: 61 AMKDAIEGMNGQDLDGRSITVNEAQSRGSGGGGGHRGGGSYGGGGGRREGGGGYSGGG-- 118
Query: 114 EGGYNRSSGGGGGYGGG---GGGGYGGGRDRGYGDDGGSRYSRGGG 156
GGY+ GGGG YGGG GGGGYGGG GYG GG GGG
Sbjct: 119 -GGYSSRGGGGGSYGGGRREGGGGYGGGEGGGYGGSGG-----GGG 158
>emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 242 bits (617), Expect = 3e-63
Identities = 123/173 (71%), Positives = 138/173 (79%), Gaps = 19/173 (10%)
Query: 4 ADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMR 63
A+VEYRCFVGGLAWATD ++LE+AFS YG++++SKIINDRETGRSRGFGFVTF+ E++MR
Sbjct: 3 AEVEYRCFVGGLAWATDDQSLERAFSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMR 62
Query: 64 DAIEGMNGQDMDGRNITVNEAQSRGSGGGGGRGGGGYGGGGGGYGGGGRREGGYNRS--- 120
DAIEGMNGQD+DGRNITVNEAQSRGSGG GGGGY GGGGG G GGRREGGYNR
Sbjct: 63 DAIEGMNGQDLDGRNITVNEAQSRGSGG----GGGGYRGGGGG-GYGGRREGGYNRGGGG 117
Query: 121 --SGGGGGYG------GGGGGGYGGG-RDRGYGDDGGSRYSRGGGGDGGSWRS 164
GGGGGYG GGGGGGYGGG R+ GYG GG RY+R G WR+
Sbjct: 118 GYGGGGGGYGGGGGGYGGGGGGYGGGRREGGYGGGGGDRYAR--GNSDSDWRN 168
>gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa (japonica
cultivar-group)]
Length = 162
Score = 241 bits (616), Expect = 4e-63
Identities = 124/169 (73%), Positives = 134/169 (78%), Gaps = 12/169 (7%)
Query: 1 MASADVEYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEK 60
MA+ DVEYRCFVGGLAWATD +LE AFS YGEI+DSKIINDRETGRSRGFGFVTF+ E+
Sbjct: 1 MAAPDVEYRCFVGGLAWATDDRSLEAAFSTYGEILDSKIINDRETGRSRGFGFVTFSSEQ 60
Query: 61 SMRDAIEGMNGQDMDGRNITVNEAQSRGSGGGGGRGGGGYGGGGGGYGGGGRREGGYNRS 120
SMRDAIEGMNG+++DGRNITVNEAQSR SGG GGGGYGGGGGGY GGGR GGY
Sbjct: 61 SMRDAIEGMNGKELDGRNITVNEAQSRRSGG----GGGGYGGGGGGY-GGGRGGGGY--G 113
Query: 121 SGGGGGYGG-----GGGGGYGGGRDRGYGDDGGSRYSRGGGGDGGSWRS 164
GGGGGYG GGGGGYGGGR G G GGSR GG GG+WR+
Sbjct: 114 GGGGGGYGRREGGYGGGGGYGGGRGGGGGGYGGSRGGGYGGDSGGNWRN 162
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.312 0.144 0.444
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 405,842,733
Number of Sequences: 2540612
Number of extensions: 28561770
Number of successful extensions: 1288098
Number of sequences better than 10.0: 22604
Number of HSP's better than 10.0 without gapping: 17060
Number of HSP's successfully gapped in prelim test: 5921
Number of HSP's that attempted gapping in prelim test: 294576
Number of HSP's gapped (non-prelim): 250779
length of query: 164
length of database: 863,360,394
effective HSP length: 118
effective length of query: 46
effective length of database: 563,568,178
effective search space: 25924136188
effective search space used: 25924136188
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 70 (31.6 bits)
Medicago: description of AC134242.10