BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC124964.9 - phase: 0
(108 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAM60825.1| unknown [Arabidopsis thaliana] gi|20148727|gb|AAM... 92 3e-18
dbj|BAD33829.1| unknown protein [Oryza sativa (japonica cultivar... 65 4e-10
emb|CAA34655.1| unnamed protein product [Homo sapiens] gi|499020... 44 7e-04
ref|XP_511935.1| PREDICTED: hypothetical protein XP_511935 [Pan ... 44 7e-04
emb|CAH70366.1| Zic family member 5 (odd-paired homolog, Drosoph... 42 0.003
gb|EAL34540.1| GA19742-PA [Drosophila pseudoobscura] 42 0.003
ref|NP_004450.3| fetal Alzheimer antigen isoform 2 [Homo sapiens] 42 0.005
ref|NP_872579.2| fetal Alzheimer antigen isoform 1 [Homo sapiens] 42 0.005
ref|NP_950041.1| hypothetical protein RPA4707 [Rhodopseudomonas ... 41 0.008
ref|XP_475171.1| unknown protein [Oryza sativa (japonica cultiva... 41 0.008
dbj|BAD81521.1| unknown protein [Oryza sativa (japonica cultivar... 41 0.008
ref|NP_912921.1| unnamed protein product [Oryza sativa (japonica... 40 0.011
dbj|BAD81166.1| hypothetical protein [Oryza sativa (japonica cul... 40 0.011
dbj|BAD35224.1| hypothetical protein [Oryza sativa (japonica cul... 40 0.014
ref|XP_425245.1| PREDICTED: similar to GluR-delta2 philic-protei... 40 0.018
gb|AAF52250.1| CG6634-PA [Drosophila melanogaster] gi|24581933|r... 40 0.018
gb|AAH24312.2| MED25 protein [Homo sapiens] 39 0.023
gb|EAA66238.1| hypothetical protein AN1120.2 [Aspergillus nidula... 39 0.023
ref|XP_220874.1| PREDICTED: similar to Stathmin (Phosphoprotein ... 39 0.031
gb|AAL48858.1| RE27439p [Drosophila melanogaster] 39 0.031
>gb|AAM60825.1| unknown [Arabidopsis thaliana] gi|20148727|gb|AAM10254.1| unknown
protein [Arabidopsis thaliana]
gi|18394996|ref|NP_564142.1| expressed protein
[Arabidopsis thaliana] gi|13877531|gb|AAK43843.1|
Unknown protein [Arabidopsis thaliana]
gi|25373055|pir||H86347 hypothetical protein F24J8.11 -
Arabidopsis thaliana gi|9454583|gb|AAF87906.1| Unknown
protein [Arabidopsis thaliana]
Length = 126
Score = 92.0 bits (227), Expect = 3e-18
Identities = 50/93 (53%), Positives = 62/93 (65%), Gaps = 12/93 (12%)
Query: 15 RRALMGFSGAVVLGLSWSDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAM 74
R L+G GA+ + + ++ A AAARRPPPPPPKEKKDP ++ QAKVLASKKRKE M
Sbjct: 42 RTILVGLGGALWSWNALAAKEEAMAAARRPPPPPPKEKKDPTVTGVQAKVLASKKRKEEM 101
Query: 75 KAEVARLREQGKAVNINKEPPPPPPVVAAPPAS 107
KA +A+LRE+GK PVV A P+S
Sbjct: 102 KASIAKLREKGK------------PVVEAKPSS 122
>dbj|BAD33829.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 106
Score = 65.1 bits (157), Expect = 4e-10
Identities = 34/56 (60%), Positives = 44/56 (77%), Gaps = 3/56 (5%)
Query: 37 ARAAARRPPPPP---PKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVN 89
A AA++R PP P+E+KDP++S QAKVLASKKRKEAMK VA++RE+GK V+
Sbjct: 50 ASAASKRRAPPAAAAPEERKDPSVSGVQAKVLASKKRKEAMKEFVAKMREKGKPVS 105
>emb|CAA34655.1| unnamed protein product [Homo sapiens] gi|49902074|gb|AAH74806.1|
Homeo box B2 [Homo sapiens] gi|49901881|gb|AAH74805.1|
Homeo box B2 [Homo sapiens] gi|4504465|ref|NP_002136.1|
homeo box B2 [Homo sapiens]
gi|123270|sp|P14652|HXB2_HUMAN Homeobox protein Hox-B2
(Hox-2H) (Hox-2.8) (K8)
Length = 356
Score = 44.3 bits (103), Expect = 7e-04
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 13/64 (20%)
Query: 45 PPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVVAAP 104
PPPPP E+ P+L + + + +K A E G A+ PPPPPP+ AAP
Sbjct: 44 PPPPPFEQTFPSLQPGASTLQRPRSQKRA---------EDGPAL----PPPPPPPLPAAP 90
Query: 105 PASE 108
PA E
Sbjct: 91 PAPE 94
>ref|XP_511935.1| PREDICTED: hypothetical protein XP_511935 [Pan troglodytes]
Length = 1130
Score = 44.3 bits (103), Expect = 7e-04
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 13/64 (20%)
Query: 45 PPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVVAAP 104
PPPPP E+ P+L + + + +K A E G A+ PPPPPP+ AAP
Sbjct: 564 PPPPPFEQTFPSLQPGASTLQRPRSQKRA---------EDGPAL----PPPPPPPLPAAP 610
Query: 105 PASE 108
PA E
Sbjct: 611 PAPE 614
>emb|CAH70366.1| Zic family member 5 (odd-paired homolog, Drosophila) [Homo sapiens]
gi|30173473|sp|Q96T25|ZIC5_HUMAN Zinc finger protein ZIC
5 (Zinc finger protein of the cerebellum 5)
gi|14165182|gb|AAK55418.1| zinc family member 5 protein
[Homo sapiens] gi|14916471|ref|NP_149123.1| zinc finger
protein of the cerebellum 5 [Homo sapiens]
Length = 639
Score = 42.4 bits (98), Expect = 0.003
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 19/119 (15%)
Query: 4 DALVGVVINLARRALMGFSGAVVLGLSWSDEQSARAAARRP----------PPPPPK--- 50
DA G V A AL G+ GAV L L+ + +A AA P PPPPP
Sbjct: 286 DAHYGAVAAAAAAALHGY-GAVNLNLNLAAAAAAAAAGPGPHLQHHAPPPAPPPPPAPAQ 344
Query: 51 --EKKDPNLSAAQAKVLASKKRKEAMKAE-VARLREQGKAVNINKEPPPPPPVVAAPPA 106
+ P+L A L + ++ +K E + + + + + PPPPPP PPA
Sbjct: 345 HPHQHHPHLPGAAGAFL--RYMRQPIKQELICKWIDPDELAGLPPPPPPPPPPPPPPPA 401
>gb|EAL34540.1| GA19742-PA [Drosophila pseudoobscura]
Length = 549
Score = 42.4 bits (98), Expect = 0.003
Identities = 36/106 (33%), Positives = 51/106 (47%), Gaps = 17/106 (16%)
Query: 14 ARRALMGFSG-AVVLGLSWSDEQSARAAARRPPPPPPK-------EKKDPNLSAAQAKVL 65
AR+ L F G + L A AAA PPPPPP +++ P L+A L
Sbjct: 400 ARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQLTAG---FL 456
Query: 66 ASKKRKEAMKAEVARLREQGKA----VNINKEPPPPPPVVAAPPAS 107
AS ++ A A+ + Q +A + N+ PPPPPP A+ P+S
Sbjct: 457 ASANQQAAAAQAAAQAQAQAQAAAAAMAANRTPPPPPP--ASTPSS 500
>ref|NP_004450.3| fetal Alzheimer antigen isoform 2 [Homo sapiens]
Length = 2903
Score = 41.6 bits (96), Expect = 0.005
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 36 SARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVA---RLREQGKAVNINK 92
+A A PPPPPP P +S+ R A +AEVA RL + +
Sbjct: 16 AAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSRR 75
Query: 93 EPPPPPPVVAAPPAS 107
+PPPPPP APP++
Sbjct: 76 KPPPPPP---APPST 87
>ref|NP_872579.2| fetal Alzheimer antigen isoform 1 [Homo sapiens]
Length = 2920
Score = 41.6 bits (96), Expect = 0.005
Identities = 27/75 (36%), Positives = 36/75 (48%), Gaps = 6/75 (8%)
Query: 36 SARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVA---RLREQGKAVNINK 92
+A A PPPPPP P +S+ R A +AEVA RL + +
Sbjct: 16 AAERCAPAPPPPPPPPTSGPIGGLRSRHRGSSRGRWAAAQAEVAPKTRLSSPRGGSSSRR 75
Query: 93 EPPPPPPVVAAPPAS 107
+PPPPPP APP++
Sbjct: 76 KPPPPPP---APPST 87
>ref|NP_950041.1| hypothetical protein RPA4707 [Rhodopseudomonas palustris CGA009]
gi|39651625|emb|CAE30147.1| conserved hypothetical
protein [Rhodopseudomonas palustris CGA009]
Length = 225
Score = 40.8 bits (94), Expect = 0.008
Identities = 26/83 (31%), Positives = 38/83 (45%), Gaps = 6/83 (7%)
Query: 26 VLGLSWSDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQG 85
+LG+ + A A RPPPPPP +P L K+L K ++ + L G
Sbjct: 29 LLGIPALAQNYAPPPADRPPPPPPARTDNPGLVDEIQKLL---KTPSSLLPSTSLLPSFG 85
Query: 86 KAVNINKEPPPPPPVVAAPPASE 108
+ +K+ PPPPP PP +
Sbjct: 86 ---SDSKDAPPPPPPTPPPPPQQ 105
>ref|XP_475171.1| unknown protein [Oryza sativa (japonica cultivar-group)]
gi|47777423|gb|AAT38057.1| unknown protein [Oryza sativa
(japonica cultivar-group)]
Length = 301
Score = 40.8 bits (94), Expect = 0.008
Identities = 22/69 (31%), Positives = 33/69 (46%), Gaps = 20/69 (28%)
Query: 39 AAARRPPPPPPKEKKDPN--LSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPP 96
+++ PPPPPP E+ +P ++ A A+ A KK +++ PPP
Sbjct: 53 SSSSSPPPPPPPEEAEPKDPIALAFARAAAYKKERDS------------------PPPPP 94
Query: 97 PPPVVAAPP 105
PPP A PP
Sbjct: 95 PPPTPAPPP 103
Score = 40.8 bits (94), Expect = 0.008
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 22/71 (30%)
Query: 37 ARAAARRPPPPPPK--EKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEP 94
A +++ PPPPPP+ E KDP ++ A A+ A KK +++ P
Sbjct: 52 ASSSSSPPPPPPPEEAEPKDP-IALAFARAAAYKKERDS-------------------PP 91
Query: 95 PPPPPVVAAPP 105
PPPPP APP
Sbjct: 92 PPPPPPTPAPP 102
>dbj|BAD81521.1| unknown protein [Oryza sativa (japonica cultivar-group)]
Length = 267
Score = 40.8 bits (94), Expect = 0.008
Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 4/71 (5%)
Query: 40 AARRPPPPPPKEKKDPNLSAA---QAKVLASKKRK-EAMKAEVARLREQGKAVNINKEPP 95
AAR PPP K K N +AA +AKV K E K E A + Q + + + + P
Sbjct: 139 AARPAPPPVEKRGKAENAAAAGAARAKVAVKKSSSSEVRKLERAPAQAQRQVLQVQRAQP 198
Query: 96 PPPPVVAAPPA 106
PPP A PA
Sbjct: 199 PPPRAPAPAPA 209
>ref|NP_912921.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 588
Score = 40.4 bits (93), Expect = 0.011
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 39 AAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPP 98
A RRPPPPPP + P SAA + +R +A + A L G A + P P
Sbjct: 251 APTRRPPPPPPPPPRCPGGSAADRHMTQPPRRPDATETTTAFL---GAASTPSPRPAPAT 307
Query: 99 PVVAAP 104
P+ AP
Sbjct: 308 PLPDAP 313
>dbj|BAD81166.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|56783733|dbj|BAD81145.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 514
Score = 40.4 bits (93), Expect = 0.011
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 39 AAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPP 98
A RRPPPPPP + P SAA + +R +A + A L G A + P P
Sbjct: 177 APTRRPPPPPPPPPRCPGGSAADRHMTQPPRRPDATETTTAFL---GAASTPSPRPAPAT 233
Query: 99 PVVAAP 104
P+ AP
Sbjct: 234 PLPDAP 239
>dbj|BAD35224.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 672
Score = 40.0 bits (92), Expect = 0.014
Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 29 LSWSDEQSARAAARRPPPP--PPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGK 86
LS S+ + R A +P PP P KE + P+ +AA + R A+ + L+E
Sbjct: 163 LSSSNPDARRRAPPQPEPPSTPRKENRVPSAAAASTAAATATPRLRALSRSRSSLKESAS 222
Query: 87 AVNINKEPPPPPP 99
+V + PPPP
Sbjct: 223 SVRDSPRRAPPPP 235
>ref|XP_425245.1| PREDICTED: similar to GluR-delta2 philic-protein [Gallus gallus]
Length = 1255
Score = 39.7 bits (91), Expect = 0.018
Identities = 25/62 (40%), Positives = 28/62 (44%), Gaps = 5/62 (8%)
Query: 44 PPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVVAA 103
PPPPPP + DP A+A+ A K V L V PPPPPPV A
Sbjct: 776 PPPPPPLQFHDPQPVPAKAEA-PKASTSPAPKPLVGHLHP----VPPPPPPPPPPPVPCA 830
Query: 104 PP 105
PP
Sbjct: 831 PP 832
>gb|AAF52250.1| CG6634-PA [Drosophila melanogaster] gi|24581933|ref|NP_608927.2|
CG6634-PA [Drosophila melanogaster]
Length = 580
Score = 39.7 bits (91), Expect = 0.018
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 17/106 (16%)
Query: 14 ARRALMGFSG-AVVLGLSWSDEQSARAAARRPPPPPPK-------EKKDPNLSAAQAKVL 65
AR+ L F G + L A AAA PPPPPP +++ P L+A L
Sbjct: 432 ARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQLTAG---FL 488
Query: 66 ASKKRKEAMKAEVARLREQGKA----VNINKEPPPPPPVVAAPPAS 107
AS ++ A A+ + Q +A + N+ PPPPP A+ P+S
Sbjct: 489 ASANQQAAAAQAAAQAQAQAQAAAAAMAANRTPPPPP--TASTPSS 532
>gb|AAH24312.2| MED25 protein [Homo sapiens]
Length = 576
Score = 39.3 bits (90), Expect = 0.023
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 39 AAARRP-PPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPPP 97
AA ++P PP PP+ + NLSAAQ +A++ EA K + A L + + PP P
Sbjct: 105 AAPQQPLPPVPPQYQVPGNLSAAQ---VAAQNAVEAAKNQKAGLGPRFSQAPAPQLPPGP 161
Query: 98 PPVVAAPPASE 108
P PPAS+
Sbjct: 162 PGAPKPPPASQ 172
>gb|EAA66238.1| hypothetical protein AN1120.2 [Aspergillus nidulans FGSC A4]
gi|67517887|ref|XP_658724.1| hypothetical protein
AN1120_2 [Aspergillus nidulans FGSC A4]
gi|49086416|ref|XP_405257.1| hypothetical protein
AN1120.2 [Aspergillus nidulans FGSC A4]
Length = 455
Score = 39.3 bits (90), Expect = 0.023
Identities = 25/71 (35%), Positives = 29/71 (40%)
Query: 37 ARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEVARLREQGKAVNINKEPPP 96
A AA R PPPPP + P +A A A A A G + PPP
Sbjct: 271 AAAAPRPPPPPPTRPTPPPPPPSATAPPSLPNGASPASLAVQAARNALGHSSQTPSIPPP 330
Query: 97 PPPVVAAPPAS 107
PPP+ AA S
Sbjct: 331 PPPLPAASAPS 341
Score = 36.6 bits (83), Expect = 0.15
Identities = 27/83 (32%), Positives = 36/83 (42%), Gaps = 14/83 (16%)
Query: 39 AAARRPPPPPPKEKKDPNL--SAAQAKVLASKKRKEAMKAEVAR--LREQGKAVNINKEP 94
AAA RPPPPPP P SA L + ++ + AR L + +I P
Sbjct: 272 AAAPRPPPPPPTRPTPPPPPPSATAPPSLPNGASPASLAVQAARNALGHSSQTPSIPPPP 331
Query: 95 PP----------PPPVVAAPPAS 107
PP PPP +APP++
Sbjct: 332 PPLPAASAPSAPPPPPPSAPPSA 354
>ref|XP_220874.1| PREDICTED: similar to Stathmin (Phosphoprotein p19) (pp19)
(Oncoprotein 18) (Op18) (Leukemia-associated
phosphoprotein p18) (pp17) (Prosolin) (Metablastin)
(Pr22 protein) [Rattus norvegicus]
Length = 151
Score = 38.9 bits (89), Expect = 0.031
Identities = 27/62 (43%), Positives = 36/62 (57%), Gaps = 8/62 (12%)
Query: 31 WSDEQSARAAARRPPPPPPKEKKDPNLSAAQAKVLASKKRKEAMKAEV----ARLREQGK 86
WS E + R PP PPK KKD +L A Q K+ A++KR+++ +AEV A RE K
Sbjct: 27 WSKESVPES---RTPPRPPK-KKDLSLEAIQKKLEAAEKRRKSHEAEVLKQLAEKREHEK 82
Query: 87 AV 88
V
Sbjct: 83 EV 84
>gb|AAL48858.1| RE27439p [Drosophila melanogaster]
Length = 571
Score = 38.9 bits (89), Expect = 0.031
Identities = 32/102 (31%), Positives = 46/102 (44%), Gaps = 9/102 (8%)
Query: 14 ARRALMGFSG-AVVLGLSWSDEQSARAAARRPPPPPPK-------EKKDPNLSAAQAKVL 65
AR+ L F G + L A AAA PPPPPP +++ P L+A
Sbjct: 432 ARQHLQMFGGNSPYAQLMMPQMYQAAAAAAGPPPPPPGLGAFHMFQQQWPQLTAGFL-AS 490
Query: 66 ASKKRKEAMKAEVARLREQGKAVNINKEPPPPPPVVAAPPAS 107
A+++ A A A+ + Q A + PPPP A+ P+S
Sbjct: 491 ANQQAAAAQAAAQAQAQTQAAAAAMAANRTPPPPPTASTPSS 532
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.311 0.128 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 221,776,830
Number of Sequences: 2540612
Number of extensions: 8804224
Number of successful extensions: 165519
Number of sequences better than 10.0: 1347
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 1165
Number of HSP's that attempted gapping in prelim test: 153024
Number of HSP's gapped (non-prelim): 6741
length of query: 108
length of database: 863,360,394
effective HSP length: 84
effective length of query: 24
effective length of database: 649,948,986
effective search space: 15598775664
effective search space used: 15598775664
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 68 (30.8 bits)
Medicago: description of AC124964.9