BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC121233.14 - phase: 0
(275 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL34159.1| putative glycine-rich, zinc-finger DNA-binding pr... 270 4e-71
gb|AAD03571.1| putative glycine-rich, zinc-finger DNA-binding pr... 270 4e-71
ref|XP_463912.1| putative Glycine-rich protein 2 [Oryza sativa (... 264 2e-69
emb|CAB81511.1| glycine-rich protein [Arabidopsis thaliana] gi|3... 258 1e-67
dbj|BAD08701.1| cold shock domain protein 3 [Triticum aestivum] 228 1e-58
dbj|BAB78536.2| cold shock protein-1 [Triticum aestivum] 226 5e-58
emb|CAA42622.1| nsGRP-2 [Nicotiana sylvestris] gi|121631|sp|P274... 213 4e-54
ref|XP_479920.1| putative cold shock protein-1 [Oryza sativa (ja... 207 2e-52
dbj|BAD08700.1| cold shock domain protein 2 [Triticum aestivum] ... 203 4e-51
emb|CAB80532.1| glycine-rich protein 2 (GRP2) [Arabidopsis thali... 197 3e-49
gb|AAD29810.1| glycine-rich protein (AtGRP2) [Arabidopsis thalia... 185 1e-45
dbj|BAE00180.1| VASA RNA helicase [Daphnia magna] 155 1e-36
dbj|BAD99522.1| VASA RNA helicase [Daphnia magna] 150 3e-35
sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP (Hexamer-binding ... 147 3e-34
dbj|BAB12217.1| vasa homolog [Ciona savignyi] 138 1e-31
gb|AAP06183.1| similar to GenBank Accession Number M94390 HEXBP ... 138 2e-31
ref|XP_331315.1| hypothetical protein [Neurospora crassa] gi|289... 137 4e-31
dbj|BAB13307.1| vasa-related protein CnVAS1 [Hydra magnipapillata] 136 7e-31
gb|EAL20847.1| hypothetical protein CNBE2080 [Cryptococcus neofo... 122 1e-26
gb|AAB47542.1| nucleic acid binding protein [Trypanosoma equiper... 121 2e-26
>gb|AAL34159.1| putative glycine-rich, zinc-finger DNA-binding protein [Arabidopsis
thaliana] gi|14334920|gb|AAK59638.1| putative
glycine-rich, zinc-finger DNA-binding protein
[Arabidopsis thaliana] gi|18398546|ref|NP_565427.1|
cold-shock DNA-binding family protein [Arabidopsis
thaliana]
Length = 301
Score = 270 bits (689), Expect = 4e-71
Identities = 146/298 (48%), Positives = 172/298 (56%), Gaps = 34/298 (11%)
Query: 5 RISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIADGDNGKT 64
R G V WF++ KG+GFI PDD E+LFVHQS I S+GFRSL+ G+ VE+ IA G +GKT
Sbjct: 10 RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGSDGKT 69
Query: 65 KAVDVTGPKGEPLQVRQDNH--------------------GGGGGGRGF-RGGERRNGG- 102
KA++VT P G L ++++ GG GG+ F GG RR+GG
Sbjct: 70 KAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGE 129
Query: 103 GGCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRG-GGN 161
G CY CGD GH ARDC R SGGGGGG R CY+CG H A+DC G GGN
Sbjct: 130 GECYMCGDVGHFARDC----RQSGGGNSGGGGGG--GRPCYSCGEVGHLAKDCRGGSGGN 183
Query: 162 NNNGGGGYGGGGTSCYRCGGVGHIARDCATPSSG--GGGGGACYKCGEVGHIARDCSNEG 219
GGGG G GG CY CGGVGH ARDC G GGGG CY CG VGHIA+ C+++
Sbjct: 184 RYGGGGGRGSGGDGCYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTSKI 243
Query: 220 GRFDGGNGR--YD-DGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAGHFARDCVEAS 274
GG GR Y+ G G R GSG G GG CF CGK GHFAR+C +
Sbjct: 244 PSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFARECTSVA 301
Score = 80.1 bits (196), Expect = 6e-14
Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 19/83 (22%)
Query: 193 SSGGGGGGACYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFGGGNRRFGSGGGGHDG 252
+S G GG C+ CGEVGH+A+DC DGG+G + FG GGG G
Sbjct: 87 NSSRGSGGNCFNCGEVGHMAKDC-------DGGSG------------GKSFGGGGGRRSG 127
Query: 253 GKGTCFNCGKAGHFARDCVEASG 275
G+G C+ CG GHFARDC ++ G
Sbjct: 128 GEGECYMCGDVGHFARDCRQSGG 150
>gb|AAD03571.1| putative glycine-rich, zinc-finger DNA-binding protein [Arabidopsis
thaliana] gi|7442089|pir||T00837 glycine-rich protein
T13L16.11 - Arabidopsis thaliana
Length = 299
Score = 270 bits (689), Expect = 4e-71
Identities = 146/298 (48%), Positives = 172/298 (56%), Gaps = 34/298 (11%)
Query: 5 RISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIADGDNGKT 64
R G V WF++ KG+GFI PDD E+LFVHQS I S+GFRSL+ G+ VE+ IA G +GKT
Sbjct: 8 RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEIALGSDGKT 67
Query: 65 KAVDVTGPKGEPLQVRQDNH--------------------GGGGGGRGF-RGGERRNGG- 102
KA++VT P G L ++++ GG GG+ F GG RR+GG
Sbjct: 68 KAIEVTAPGGGSLNKKENSSRGSGGNCFNCGEVGHMAKDCDGGSGGKSFGGGGGRRSGGE 127
Query: 103 GGCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRG-GGN 161
G CY CGD GH ARDC R SGGGGGG R CY+CG H A+DC G GGN
Sbjct: 128 GECYMCGDVGHFARDC----RQSGGGNSGGGGGG--GRPCYSCGEVGHLAKDCRGGSGGN 181
Query: 162 NNNGGGGYGGGGTSCYRCGGVGHIARDCATPSSG--GGGGGACYKCGEVGHIARDCSNEG 219
GGGG G GG CY CGGVGH ARDC G GGGG CY CG VGHIA+ C+++
Sbjct: 182 RYGGGGGRGSGGDGCYMCGGVGHFARDCRQNGGGNVGGGGSTCYTCGGVGHIAKVCTSKI 241
Query: 220 GRFDGGNGR--YD-DGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAGHFARDCVEAS 274
GG GR Y+ G G R GSG G GG CF CGK GHFAR+C +
Sbjct: 242 PSGGGGGGRACYECGGTGHLARDCDRRGSGSSGGGGGSNKCFICGKEGHFARECTSVA 299
Score = 80.1 bits (196), Expect = 6e-14
Identities = 37/83 (44%), Positives = 47/83 (56%), Gaps = 19/83 (22%)
Query: 193 SSGGGGGGACYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFGGGNRRFGSGGGGHDG 252
+S G GG C+ CGEVGH+A+DC DGG+G + FG GGG G
Sbjct: 85 NSSRGSGGNCFNCGEVGHMAKDC-------DGGSG------------GKSFGGGGGRRSG 125
Query: 253 GKGTCFNCGKAGHFARDCVEASG 275
G+G C+ CG GHFARDC ++ G
Sbjct: 126 GEGECYMCGDVGHFARDCRQSGG 148
>ref|XP_463912.1| putative Glycine-rich protein 2 [Oryza sativa (japonica
cultivar-group)] gi|51963818|ref|XP_506692.1| PREDICTED
OSJNBb0088N06.21 gene product [Oryza sativa (japonica
cultivar-group)] gi|41052743|dbj|BAD07599.1| putative
Glycine-rich protein 2 [Oryza sativa (japonica
cultivar-group)] gi|41052630|dbj|BAD08139.1| putative
Glycine-rich protein 2 [Oryza sativa (japonica
cultivar-group)]
Length = 241
Score = 264 bits (675), Expect = 2e-69
Identities = 141/276 (51%), Positives = 165/276 (59%), Gaps = 46/276 (16%)
Query: 2 AEERISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIADGDN 61
A R G V+WFN+TKGFGFI PDD SEDLFVHQS I+++GFRSL+EG++VEF I++ ++
Sbjct: 3 AAARHRGTVKWFNDTKGFGFISPDDGSEDLFVHQSSIKADGFRSLAEGEQVEFAISESED 62
Query: 62 GKTKAVDVTGPKGEPLQVRQDNHGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRS 121
G+TKAVDVTGP G ++ GGGGGG G RGG GGG Y G
Sbjct: 63 GRTKAVDVTGPDGSFVKGGAGGGGGGGGGFGSRGGGGSGGGGRSYGGSWGG--------- 113
Query: 122 DRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGG-GTSCYRCG 180
RSGGGG G C+ CG H ARDC GGG GGGG GGG G C++CG
Sbjct: 114 -----GRRSGGGGPGG---GCFKCGESGHMARDCFNGGGVGVGGGGGGGGGAGGGCFKCG 165
Query: 181 GVGHIARDCATPSSGGGGGG------ACYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNG 234
+GH+ARDC GGGGGG ACY CGE GH+ARDC N GG GG G G
Sbjct: 166 EMGHMARDCFNSGGGGGGGGGGGGGGACYNCGETGHLARDCYNGGG---GG------GGG 216
Query: 235 RFGGGNRRFGSGGGGHDGGKGTCFNCGKAGHFARDC 270
RFGG GG +C+NCG+AGH ARDC
Sbjct: 217 RFGG-------------GGDRSCYNCGEAGHIARDC 239
Score = 50.8 bits (120), Expect = 4e-05
Identities = 25/49 (51%), Positives = 30/49 (61%), Gaps = 6/49 (12%)
Query: 74 GEPLQVRQDNHGGGGGGRGFRGGERRNGGG--GCYTCGDTGHIARDCDR 120
GE + +D + GGGGG GG R GGG CY CG+ GHIARDC +
Sbjct: 197 GETGHLARDCYNGGGGG----GGGRFGGGGDRSCYNCGEAGHIARDCHK 241
>emb|CAB81511.1| glycine-rich protein [Arabidopsis thaliana]
gi|3036806|emb|CAA18496.1| glycine-rich protein
[Arabidopsis thaliana] gi|15233440|ref|NP_195326.1|
cold-shock DNA-binding family protein [Arabidopsis
thaliana] gi|7442090|pir||T05494 glycine-rich protein
T19K4.150 - Arabidopsis thaliana
Length = 299
Score = 258 bits (659), Expect = 1e-67
Identities = 141/297 (47%), Positives = 165/297 (55%), Gaps = 42/297 (14%)
Query: 5 RISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIADGDNGKT 64
R +G V WFN +KG+GFI PDD S +LFVHQS I SEG+RSL+ GD VEF I G +GKT
Sbjct: 10 RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAITQGSDGKT 69
Query: 65 KAVDVTGPKGEPLQVRQDNHG-----GGGG------------------GRGFRGGERRN- 100
KAV+VT P G L+ ++ G GGGG G G GGERR+
Sbjct: 70 KAVNVTAPGGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERRSR 129
Query: 101 GGGGCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGG 160
GG GCY CGDTGH ARDC + D+ + GG G CYTCG H ARDC +
Sbjct: 130 GGEGCYNCGDTGHFARDCTSAGNGDQRGATKGGNDG-----CYTCGDVGHVARDCTQKSV 184
Query: 161 NNNNGGGGYGGGGTSCYRCGGVGHIARDC------ATPSSGGGGGGACYKCGEVGHIARD 214
N + G GG CY CG VGH ARDC SGGGG G CY CG VGHIARD
Sbjct: 185 GNGDQRGAVKGGNDGCYTCGDVGHFARDCTQKVAAGNVRSGGGGSGTCYSCGGVGHIARD 244
Query: 215 CSNEGGRFDGGNGRYD-DGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAGHFARDC 270
C+ + G Y G+G + GSGGGG+D C+ CGK GHFAR+C
Sbjct: 245 CAT---KRQPSRGCYQCGGSGHLARDCDQRGSGGGGND---NACYKCGKEGHFAREC 295
Score = 98.2 bits (243), Expect = 2e-19
Identities = 53/129 (41%), Positives = 67/129 (51%), Gaps = 35/129 (27%)
Query: 158 GGG-----NNNNGGGGY-GGGGTSCYRCGGVGHIARDCATPSSGGGG------GGACYKC 205
GGG NN+ G G GGGG+ CY CG +GHI++DC GGGG G CY C
Sbjct: 78 GGGSLKKENNSRGNGARRGGGGSGCYNCGELGHISKDCGIGGGGGGGERRSRGGEGCYNC 137
Query: 206 GEVGHIARDCSNEGGRFDGGNGRYDDGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAGH 265
G+ GH ARDC++ G G++R G+ GG+DG C+ CG GH
Sbjct: 138 GDTGHFARDCTSAGN------------------GDQR-GATKGGNDG----CYTCGDVGH 174
Query: 266 FARDCVEAS 274
ARDC + S
Sbjct: 175 VARDCTQKS 183
>dbj|BAD08701.1| cold shock domain protein 3 [Triticum aestivum]
Length = 231
Score = 228 bits (582), Expect = 1e-58
Identities = 134/284 (47%), Positives = 151/284 (52%), Gaps = 77/284 (27%)
Query: 4 ERISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIADGDNGK 63
ER+ G V+WFN TKGFGFI PDD EDLFVHQS I+S+G+RSL+E D VEF I GD+G+
Sbjct: 3 ERVKGTVKWFNVTKGFGFISPDDGGEDLFVHQSAIKSDGYRSLNENDAVEFEIITGDDGR 62
Query: 64 TKAVDVTGPKGEPLQVRQDNHGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDR 123
TKA DVT P G L G GGG RG RGG GGGG Y G G+
Sbjct: 63 TKASDVTAPGGGALS-GGSRPGEGGGDRGGRGGY--GGGGGGYGGGGGGY---------- 109
Query: 124 NDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGG---TSCYRCG 180
GGGGGG GGG GGGGYGGGG CY+CG
Sbjct: 110 -------GGGGGG--------------------YGGGGGGYGGGGYGGGGGGGRGCYKCG 142
Query: 181 GVGHIARDCATPSSGGGGGG--------------ACYKCGEVGHIARDCSNEGGRFDGGN 226
GHI+RDC P GGGGGG CYKCGE GHI+RDC GG
Sbjct: 143 EDGHISRDC--PQGGGGGGGYGGGGYGGGGGGGRECYKCGEEGHISRDCPQGGG------ 194
Query: 227 GRYDDGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAGHFARDC 270
G G GGG R G GGGG CF+CG++GHF+R+C
Sbjct: 195 -----GGGYGGGGGRGGGGGGGG-------CFSCGESGHFSREC 226
>dbj|BAB78536.2| cold shock protein-1 [Triticum aestivum]
Length = 229
Score = 226 bits (576), Expect = 5e-58
Identities = 132/283 (46%), Positives = 151/283 (52%), Gaps = 77/283 (27%)
Query: 4 ERISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIADGDNGK 63
ER+ G V+WFN TKGFGFI P+D SEDLFVHQS I+S+G+RSL+E D VEF + GD+G+
Sbjct: 3 ERVKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKSDGYRSLNENDTVEFEVITGDDGR 62
Query: 64 TKAVDVTGPKGEPLQVRQDNHGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDR 123
TKA DVT P G L G GGG RG RGG G GG
Sbjct: 63 TKASDVTAPGGGALS-GGSRPGDGGGDRGGRGGYGGGGYGG------------------- 102
Query: 124 NDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGG--TSCYRCGG 181
GGGGGG GGG GGGGYGGGG CY+CG
Sbjct: 103 -------GGGGGGYGG------------------GGGGYGGGGGGYGGGGGGRGCYKCGE 137
Query: 182 VGHIARDCATPSSGGGGGG--------------ACYKCGEVGHIARDCSNEGGRFDGGNG 227
GHI+RDC P GGGGGG CYKCGE GHI+RDC +GG GG G
Sbjct: 138 EGHISRDC--PQGGGGGGGYGGGGYGGGGGGGRECYKCGEEGHISRDCP-QGGGGGGGGG 194
Query: 228 RYDDGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAGHFARDC 270
Y G GR GGG GGGG CF+CG++GHF+R+C
Sbjct: 195 GYGGGGGRGGGG------GGGG-------CFSCGESGHFSREC 224
>emb|CAA42622.1| nsGRP-2 [Nicotiana sylvestris] gi|121631|sp|P27484|GRP2_NICSY
Glycine-rich protein 2
Length = 214
Score = 213 bits (543), Expect = 4e-54
Identities = 129/273 (47%), Positives = 143/273 (52%), Gaps = 67/273 (24%)
Query: 1 MAEE---RISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIA 57
MAEE R G V+WF++ KGFGFI PDD EDLFVHQS IRSEGFRSL+EG+ VEF +
Sbjct: 1 MAEESGQRAKGTVKWFSDQKGFGFITPDDGGEDLFVHQSGIRSEGFRSLAEGETVEFEVE 60
Query: 58 DGDNGKTKAVDVTGPKGEPLQVRQDNHGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARD 117
G +G+TKAVDVTGP G +Q GGGGGG G RGG GG G Y G G
Sbjct: 61 SGGDGRTKAVDVTGPDGAAVQ---GGRGGGGGGGG-RGGGGYGGGSGGYGGGGRGG---- 112
Query: 118 CDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCY 177
S G GGGD G + GGG GG YGGGG
Sbjct: 113 ------------SRGYGGGD--------GGY---------GGGGGYGGGSRYGGGGGGYG 143
Query: 178 RCGGVGHIARDCATPSSGGGGGGACYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFG 237
GG G G GGG C+KCGE GH ARDCS GG G
Sbjct: 144 GGGGYG---------GGGSGGGSGCFKCGESGHFARDCSQSGG----------------G 178
Query: 238 GGNRRFGSGGGGHDGGKGTCFNCGKAGHFARDC 270
GG RFG GGGG GG G C+ CG+ GHFAR+C
Sbjct: 179 GGGGRFGGGGGG--GGGGGCYKCGEDGHFAREC 209
Score = 55.8 bits (133), Expect = 1e-06
Identities = 23/39 (58%), Positives = 25/39 (63%)
Query: 85 GGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDR 123
GGGGGG F GG GGGGCY CG+ GH AR+C R
Sbjct: 176 GGGGGGGRFGGGGGGGGGGGCYKCGEDGHFARECTSGGR 214
>ref|XP_479920.1| putative cold shock protein-1 [Oryza sativa (japonica
cultivar-group)] gi|51964662|ref|XP_507115.1| PREDICTED
P0582D05.112 gene product [Oryza sativa (japonica
cultivar-group)] gi|29467522|dbj|BAC66711.1| putative
cold shock protein-1 [Oryza sativa (japonica
cultivar-group)]
Length = 197
Score = 207 bits (528), Expect = 2e-52
Identities = 120/270 (44%), Positives = 143/270 (52%), Gaps = 78/270 (28%)
Query: 1 MAEERISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIADGD 60
MA ER+ G V+WF+ TKGFGFI PDD EDLFVHQS ++S+G+RSL++GD VEF++ G+
Sbjct: 1 MASERVKGTVKWFDATKGFGFITPDDGGEDLFVHQSSLKSDGYRSLNDGDVVEFSVGSGN 60
Query: 61 NGKTKAVDVTGPKGEPLQVRQDNHGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDR 120
+G+TKAVDVT P G L + GGG RG+ GG GGGG Y GD G+
Sbjct: 61 DGRTKAVDVTAPGGGALT--GGSRPSGGGDRGYGGG----GGGGRYG-GDRGY------- 106
Query: 121 SDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRCG 180
GGGGGG GG GGGGYGGGG
Sbjct: 107 ----------GGGGGG-------------------YGGGDRGYGGGGGYGGGG------- 130
Query: 181 GVGHIARDCATPSSGGGGGGACYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFGGGN 240
GGG ACYKCGE GH+ARDCS GG G G +GGG
Sbjct: 131 ---------------GGGSRACYKCGEEGHMARDCSQGGG-----------GGGGYGGGG 164
Query: 241 RRFGSGGGGHDGGKGTCFNCGKAGHFARDC 270
+ GGGG GG G C+NCG+ GH AR+C
Sbjct: 165 GGYRGGGGG--GGGGGCYNCGETGHIAREC 192
Score = 67.4 bits (163), Expect = 4e-10
Identities = 44/127 (34%), Positives = 51/127 (39%), Gaps = 40/127 (31%)
Query: 152 ARDCMRGGGNNNNGGGGYGGGGTSCYRCGGVGHIARDCATPSSGGGGGGACYKCGEVGHI 211
A D GG GG GGG Y GGGGG
Sbjct: 66 AVDVTAPGGGALTGGSRPSGGGDRGY------------------GGGGG----------- 96
Query: 212 ARDCSNEGGRFDGGNGRYDDGNGRFGGGNRRFGSGGG---GHDGGKGTCFNCGKAGHFAR 268
GGR+ G G Y G G +GGG+R +G GGG G GG C+ CG+ GH AR
Sbjct: 97 -------GGRYGGDRG-YGGGGGGYGGGDRGYGGGGGYGGGGGGGSRACYKCGEEGHMAR 148
Query: 269 DCVEASG 275
DC + G
Sbjct: 149 DCSQGGG 155
>dbj|BAD08700.1| cold shock domain protein 2 [Triticum aestivum]
gi|40363759|dbj|BAD06324.1| putative glycine-rich
protein [Triticum aestivum]
Length = 205
Score = 203 bits (517), Expect = 4e-51
Identities = 123/267 (46%), Positives = 142/267 (53%), Gaps = 69/267 (25%)
Query: 4 ERISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIADGDNGK 63
ER+ G V+WFN TKGFGFI P+D SEDLFVHQS I+++G+RSL+E D VEF + GD+G+
Sbjct: 3 ERLKGTVKWFNVTKGFGFISPEDGSEDLFVHQSAIKADGYRSLNENDVVEFEVITGDDGR 62
Query: 64 TKAVDVTGPKGEPLQVRQDNHGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDR 123
TKA DVT P G L GGG RG RGG GGG Y G G+
Sbjct: 63 TKATDVTAPGGGAL-AGGSRPSEGGGDRGGRGGGGYGGGG--YGGGGGGY---------- 109
Query: 124 NDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRCGGVG 183
GGGGGG GGG + GGGGYGGGG R GG
Sbjct: 110 -------GGGGGG-------------------YGGGGGSYGGGGGYGGGGGGG-RYGG-- 140
Query: 184 HIARDCATPSSGGGGGGACYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFGGGNRRF 243
G GGG CYKCGE GHI+RDC GG GG G Y G GR GGG
Sbjct: 141 -----------GSGGGRECYKCGEEGHISRDCPQGGG---GGGGGYGGGGGRGGGG---- 182
Query: 244 GSGGGGHDGGKGTCFNCGKAGHFARDC 270
GGGG CF+CG++GHF+R+C
Sbjct: 183 --GGGG-------CFSCGESGHFSREC 200
>emb|CAB80532.1| glycine-rich protein 2 (GRP2) [Arabidopsis thaliana]
gi|4467155|emb|CAB37524.1| glycine-rich protein 2 (GRP2)
[Arabidopsis thaliana] gi|14532850|gb|AAK64107.1|
putative glycine-rich protein 2 [Arabidopsis thaliana]
gi|13430580|gb|AAK25912.1| putative glycine-rich protein
GRP2 [Arabidopsis thaliana] gi|22137152|gb|AAM91421.1|
AT4g38680/F20M13_240 [Arabidopsis thaliana]
gi|259445|gb|AAB24074.1| glycine-rich protein; atGRP
[Arabidopsis thaliana] gi|15234010|ref|NP_195580.1|
cold-shock DNA-binding family protein [Arabidopsis
thaliana] gi|14326487|gb|AAK60289.1|
AT4g38680/F20M13_240 [Arabidopsis thaliana]
gi|81624|pir||JQ1061 glycine-rich protein 2 -
Arabidopsis thaliana
Length = 203
Score = 197 bits (501), Expect = 3e-49
Identities = 112/267 (41%), Positives = 132/267 (48%), Gaps = 77/267 (28%)
Query: 4 ERISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIADGDNGK 63
ER G V+WF+ KGFGFI PDD +DLFVHQS IRSEGFRSL+ + VEF + +N +
Sbjct: 9 ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVEIDNNNR 68
Query: 64 TKAVDVTGPKGEPLQVRQDNHGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDR 123
KA+DV+GP G P+Q GGG G RGG
Sbjct: 69 PKAIDVSGPDGAPVQ-----GNSGGGSSGGRGG--------------------------- 96
Query: 124 NDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRCGGVG 183
GGG GG R GG GGGGYGG G
Sbjct: 97 ------FGGGRGGGRG------------------SGGGYGGGGGGYGGRG---------- 122
Query: 184 HIARDCATPSSGGGGGGACYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFGGGNRRF 243
GG GG CYKCGE GH+ARDCS GG + GG G Y G G +GGG +
Sbjct: 123 ----------GGGRGGSDCYKCGEPGHMARDCSEGGGGYGGGGGGYGGGGG-YGGGGGGY 171
Query: 244 GSGGGGHDGGKGTCFNCGKAGHFARDC 270
G GG G GG G+C++CG++GHFARDC
Sbjct: 172 GGGGRGGGGGGGSCYSCGESGHFARDC 198
Score = 58.2 bits (139), Expect = 3e-07
Identities = 32/84 (38%), Positives = 37/84 (43%), Gaps = 15/84 (17%)
Query: 192 PSSGGGGGGACYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFGGGNRRFGSGGGGHD 251
P G GGG+ S G F GG G G +GGG +G GGG
Sbjct: 81 PVQGNSGGGS--------------SGGRGGFGGGRGGGRGSGGGYGGGGGGYGGRGGGGR 126
Query: 252 GGKGTCFNCGKAGHFARDCVEASG 275
GG C+ CG+ GH ARDC E G
Sbjct: 127 GGSD-CYKCGEPGHMARDCSEGGG 149
Score = 55.1 bits (131), Expect = 2e-06
Identities = 24/41 (58%), Positives = 28/41 (67%), Gaps = 2/41 (4%)
Query: 85 GGGGGGRGFRGGERRNGGGG--CYTCGDTGHIARDCDRSDR 123
G GGGG G+ GG R GGGG CY+CG++GH ARDC R
Sbjct: 163 GYGGGGGGYGGGGRGGGGGGGSCYSCGESGHFARDCTSGGR 203
>gb|AAD29810.1| glycine-rich protein (AtGRP2) [Arabidopsis thaliana]
gi|60543359|gb|AAX22277.1| At2g21060 [Arabidopsis
thaliana] gi|16323178|gb|AAL15323.1| At2g21060/F26H11.18
[Arabidopsis thaliana] gi|17366505|sp|Q38896|GRP2B_ARATH
Glycine-rich protein 2b (AtGRP2b)
gi|15226451|ref|NP_179702.1| cold-shock DNA-binding
family protein / glycine-rich protein (GRP2)
[Arabidopsis thaliana] gi|1063684|gb|AAA91165.1| AtGRP2b
Length = 201
Score = 185 bits (469), Expect = 1e-45
Identities = 112/268 (41%), Positives = 140/268 (51%), Gaps = 86/268 (32%)
Query: 4 ERISGVVQWFNNTKGFGFIKPDDDSEDLFVHQSDIRSEGFRSLSEGDRVEFTIADGDNGK 63
+R G V+WF+ KGFGFI P D +DLFVHQS IRSEGFRSL+ + VEF + ++G+
Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVEVDNSGR 72
Query: 64 TKAVDVTGPKGEPLQVRQDNHGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDR 123
KA++V+GP G P+Q + GGGG G RGG GGG
Sbjct: 73 PKAIEVSGPDGAPVQ----GNSGGGGSSGGRGGF----GGG------------------- 105
Query: 124 NDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRCGGVG 183
GG GGG RGGG+ GGGYGG G+ GG G
Sbjct: 106 -------GGRGGG--------------------RGGGSY---GGGYGGRGS-----GGRG 130
Query: 184 HIARDCATPSSGGGGGGACYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFGGGNRRF 243
GGGG +C+KCGE GH+AR+CS GG + G GGG R+
Sbjct: 131 -----------GGGGDNSCFKCGEPGHMARECSQGGGGYSG------------GGGGGRY 167
Query: 244 GSGGGGHDGGKG-TCFNCGKAGHFARDC 270
GSGGGG GG G +C++CG++GHFARDC
Sbjct: 168 GSGGGGGGGGGGLSCYSCGESGHFARDC 195
Score = 78.2 bits (191), Expect = 2e-13
Identities = 64/199 (32%), Positives = 76/199 (38%), Gaps = 64/199 (32%)
Query: 87 GGGGRGFRGGERRNG---------GGGCYTCGDTG------------------------H 113
GGG GG+RR G G G T D G
Sbjct: 3 GGGDVNMSGGDRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVE 62
Query: 114 IARDCDRSDRNDRNDRSG----------GGGGGDRDRACYTCGSFEHFAR-DCMRGGGNN 162
+ D S R + SG GGGG R + G R GGG
Sbjct: 63 FDVEVDNSGRPKAIEVSGPDGAPVQGNSGGGGSSGGRGGFGGGGGRGGGRGGGSYGGGYG 122
Query: 163 NNGGGGYGGGG--TSCYRCGGVGHIARDCATPS---SGGGGGG---------------AC 202
G GG GGGG SC++CG GH+AR+C+ SGGGGGG +C
Sbjct: 123 GRGSGGRGGGGGDNSCFKCGEPGHMARECSQGGGGYSGGGGGGRYGSGGGGGGGGGGLSC 182
Query: 203 YKCGEVGHIARDCSNEGGR 221
Y CGE GH ARDC++ G R
Sbjct: 183 YSCGESGHFARDCTSGGAR 201
Score = 61.2 bits (147), Expect = 3e-08
Identities = 34/85 (40%), Positives = 39/85 (45%), Gaps = 14/85 (16%)
Query: 192 PSSGGGGGGACYKCGEVGHIARDCSNEGGRFDGGNGRYDD-GNGRFGGGNRRFGSGGGGH 250
P G GGG S G F GG GR G G +GGG GSGG G
Sbjct: 85 PVQGNSGGGGS-------------SGGRGGFGGGGGRGGGRGGGSYGGGYGGRGSGGRGG 131
Query: 251 DGGKGTCFNCGKAGHFARDCVEASG 275
GG +CF CG+ GH AR+C + G
Sbjct: 132 GGGDNSCFKCGEPGHMARECSQGGG 156
>dbj|BAE00180.1| VASA RNA helicase [Daphnia magna]
Length = 779
Score = 155 bits (392), Expect = 1e-36
Identities = 82/190 (43%), Positives = 105/190 (55%), Gaps = 26/190 (13%)
Query: 85 GGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYT 144
GGG G G G + GG C+ CG+ GH+AR+C + GGGGGG RAC+
Sbjct: 121 GGGWGSTGASGLKSTGGGRPCHKCGEEGHMARECPK----------GGGGGGGGSRACHK 170
Query: 145 CGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRCGGVGHIARDCATPSSGGGGGG---A 201
CG HF+R+C + GGG G G +C++CG GH +R+C GGGGGG A
Sbjct: 171 CGEEGHFSRECPQ-------AGGGGGSGPRTCHKCGEEGHFSRECPQGGGGGGGGGGSRA 223
Query: 202 CYKCGEVGHIARDCSNEGGRFDGGNG-RYDDGNGRFGGGNRRFGSGGGGHDGGKGTCFNC 260
C+KCGE GH +R+C GG GG+G R G G +R GGG GG G CF C
Sbjct: 224 CHKCGEEGHFSRECPQGGG--GGGSGPRTCHKCGEEGHMSRDCPQGGG---GGDGKCFKC 278
Query: 261 GKAGHFARDC 270
+AGH ++DC
Sbjct: 279 HEAGHTSKDC 288
Score = 128 bits (321), Expect = 2e-28
Identities = 68/167 (40%), Positives = 87/167 (51%), Gaps = 23/167 (13%)
Query: 123 RNDRNDRSGGGGGGDRD----------RACYTCGSFEHFARDCMRGGGNNNNGGGGYGGG 172
+ND +D+ GGG G R C+ CG H AR+C +GGG G GGG
Sbjct: 112 KNDFDDQPRGGGWGSTGASGLKSTGGGRPCHKCGEEGHMARECPKGGG-------GGGGG 164
Query: 173 GTSCYRCGGVGHIARDCATPSSGGGGGGA---CYKCGEVGHIARDCSNEGGRFDGGNG-R 228
+C++CG GH +R+C P +GGGGG C+KCGE GH +R+C GG GG G R
Sbjct: 165 SRACHKCGEEGHFSREC--PQAGGGGGSGPRTCHKCGEEGHFSRECPQGGGGGGGGGGSR 222
Query: 229 YDDGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAGHFARDCVEASG 275
G G +R GGGG G TC CG+ GH +RDC + G
Sbjct: 223 ACHKCGEEGHFSRECPQGGGGGGSGPRTCHKCGEEGHMSRDCPQGGG 269
Score = 127 bits (318), Expect = 4e-28
Identities = 66/156 (42%), Positives = 85/156 (54%), Gaps = 35/156 (22%)
Query: 80 RQDNHGGGGGGRGFRG----GE---------RRNGGGG-----CYTCGDTGHIARDCDRS 121
R+ GGGGGG G R GE + GGGG C+ CG+ GH +R+C +
Sbjct: 152 RECPKGGGGGGGGSRACHKCGEEGHFSRECPQAGGGGGSGPRTCHKCGEEGHFSRECPQG 211
Query: 122 DRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRCGG 181
GGGGGG RAC+ CG HF+R+C +GGG G G G +C++CG
Sbjct: 212 --------GGGGGGGGGSRACHKCGEEGHFSRECPQGGG-------GGGSGPRTCHKCGE 256
Query: 182 VGHIARDCATPSSGGGGGGACYKCGEVGHIARDCSN 217
GH++RDC P GGGG G C+KC E GH ++DC N
Sbjct: 257 EGHMSRDC--PQGGGGGDGKCFKCHEAGHTSKDCPN 290
>dbj|BAD99522.1| VASA RNA helicase [Daphnia magna]
Length = 775
Score = 150 bits (380), Expect = 3e-35
Identities = 78/187 (41%), Positives = 101/187 (53%), Gaps = 24/187 (12%)
Query: 85 GGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYT 144
GGG G G G + GG C+ CG+ GH+AR+C + GGGGG RAC+
Sbjct: 121 GGGWGSSGANGLKSTGGGRPCHKCGEEGHMARECPK-----------GGGGGGGSRACHK 169
Query: 145 CGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRCGGVGHIARDCATPSSGGGGGGACYK 204
CG HF+R+C + GGG G G +C++CG GH +R+C GGGG AC+K
Sbjct: 170 CGEEGHFSRECPQ-------AGGGGGSGPRTCHKCGEEGHFSRECPQGGGGGGGSRACHK 222
Query: 205 CGEVGHIARDCSNEGGRFDGGNG-RYDDGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKA 263
CGE GH +R+C GG GG+G R G G +R GGG GG CF C +A
Sbjct: 223 CGEEGHFSRECPQGGG--GGGSGPRTCHKCGEEGHVSRDCPQGGG---GGDSKCFKCHEA 277
Query: 264 GHFARDC 270
GH ++DC
Sbjct: 278 GHTSKDC 284
Score = 120 bits (300), Expect = 5e-26
Identities = 64/162 (39%), Positives = 85/162 (51%), Gaps = 38/162 (23%)
Query: 74 GEPLQVRQDNHGGGGGGRGFRG----GE---------RRNGGGG-----CYTCGDTGHIA 115
GE + ++ GGGGG G R GE + GGGG C+ CG+ GH +
Sbjct: 145 GEEGHMARECPKGGGGGGGSRACHKCGEEGHFSRECPQAGGGGGSGPRTCHKCGEEGHFS 204
Query: 116 RDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTS 175
R+C + GGGGG RAC+ CG HF+R+C + GGGG G G +
Sbjct: 205 RECPQ-----------GGGGGGGSRACHKCGEEGHFSRECPQ-------GGGGGGSGPRT 246
Query: 176 CYRCGGVGHIARDCATPSSGGGGGGACYKCGEVGHIARDCSN 217
C++CG GH++RDC P GGGG C+KC E GH ++DC N
Sbjct: 247 CHKCGEEGHVSRDC--PQGGGGGDSKCFKCHEAGHTSKDCPN 286
Score = 108 bits (271), Expect = 1e-22
Identities = 57/131 (43%), Positives = 74/131 (55%), Gaps = 6/131 (4%)
Query: 148 FEHFARDCMRGGGNNNNGGGGYG--GGGTSCYRCGGVGHIARDCATPSSGGGGGGACYKC 205
F++ D RGGG ++G G GGG C++CG GH+AR+C GGGG AC+KC
Sbjct: 111 FKNDFDDQPRGGGWGSSGANGLKSTGGGRPCHKCGEEGHMARECPKGGGGGGGSRACHKC 170
Query: 206 GEVGHIARDCSNEGGRFDGGNG-RYDDGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAG 264
GE GH +R+C GG GG+G R G G +R GGGG GG C CG+ G
Sbjct: 171 GEEGHFSRECPQAGG--GGGSGPRTCHKCGEEGHFSRECPQGGGG-GGGSRACHKCGEEG 227
Query: 265 HFARDCVEASG 275
HF+R+C + G
Sbjct: 228 HFSRECPQGGG 238
>sp|Q04832|HEXP_LEIMA DNA-binding protein HEXBP (Hexamer-binding protein)
gi|159342|gb|AAA29245.1| HEXBP DNA binding protein
Length = 271
Score = 147 bits (371), Expect = 3e-34
Identities = 79/206 (38%), Positives = 97/206 (46%), Gaps = 46/206 (22%)
Query: 71 GPKGEPLQVRQDNHGGGGGGRGFRGGERRNGGG-----GCYTCGDTGHIARDCDRSDRND 125
G +G + + GG GG G + G GG CY CGD GHI+RDC
Sbjct: 103 GQEGHLSRDCPSSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQ--- 159
Query: 126 RNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGT-SCYRCGGVGH 184
GG G DR CY CG H +RDC NG GGY G G CY+CG GH
Sbjct: 160 ------GGYSGAGDRTCYKCGDAGHISRDCP-------NGQGGYSGAGDRKCYKCGESGH 206
Query: 185 IARDCATPSSGGGGGGACYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFGGGNRRFG 244
++R+C + S G G ACYKCG+ GHI+R+C GG +
Sbjct: 207 MSRECPSAGSTGSGDRACYKCGKPGHISRECPEAGGSY---------------------- 244
Query: 245 SGGGGHDGGKGTCFNCGKAGHFARDC 270
GG GG TC+ CG+AGH +RDC
Sbjct: 245 --GGSRGGGDRTCYKCGEAGHISRDC 268
Score = 136 bits (342), Expect = 7e-31
Identities = 74/194 (38%), Positives = 93/194 (47%), Gaps = 27/194 (13%)
Query: 97 ERRNGGGG---CYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFAR 153
E R+G G C+ CG+ GH++RDC S + G + CY CG H +R
Sbjct: 61 EARSGAAGAMTCFRCGEAGHMSRDCPNSAKP----------GAAKGFECYKCGQEGHLSR 110
Query: 154 DCMRGGGNNNNG----------GGGYGGGGTSCYRCGGVGHIARDCATPSSGGGGGG--A 201
DC G + G GGY G T CY+CG GHI+RDC G G G
Sbjct: 111 DCPSSQGGSRGGYGQKRGRSGAQGGYSGDRT-CYKCGDAGHISRDCPNGQGGYSGAGDRT 169
Query: 202 CYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFGGGNRRFGSGGGGHDGGKGTCFNCG 261
CYKCG+ GHI+RDC N G + G R G G +R S G G + C+ CG
Sbjct: 170 CYKCGDAGHISRDCPNGQGGYSGAGDRKCYKCGESGHMSRECPSAGSTGSGDRA-CYKCG 228
Query: 262 KAGHFARDCVEASG 275
K GH +R+C EA G
Sbjct: 229 KPGHISRECPEAGG 242
Score = 119 bits (298), Expect = 9e-26
Identities = 65/195 (33%), Positives = 87/195 (44%), Gaps = 34/195 (17%)
Query: 98 RRNGGGGCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMR 157
R C CG GH AR+C +D G +R C+ CG H +R+C
Sbjct: 11 RTESSTSCRNCGKEGHYARECPEADSK----------GDERSTTCFRCGEEGHMSRECP- 59
Query: 158 GGGNNNNGGGGYGGGGTSCYRCGGVGHIARDCATPSSGGGGGG-ACYKCGEVGHIARDCS 216
N G +C+RCG GH++RDC + G G CYKCG+ GH++RDC
Sbjct: 60 ------NEARSGAAGAMTCFRCGEAGHMSRDCPNSAKPGAAKGFECYKCGQEGHLSRDCP 113
Query: 217 NEGGRFDGGNGRYDDGNGRFGGGN---------------RRFGSGGGGHDG-GKGTCFNC 260
+ G GG G+ +G GG + R +G GG+ G G TC+ C
Sbjct: 114 SSQGGSRGGYGQKRGRSGAQGGYSGDRTCYKCGDAGHISRDCPNGQGGYSGAGDRTCYKC 173
Query: 261 GKAGHFARDCVEASG 275
G AGH +RDC G
Sbjct: 174 GDAGHISRDCPNGQG 188
Score = 41.2 bits (95), Expect = 0.032
Identities = 20/48 (41%), Positives = 26/48 (53%), Gaps = 4/48 (8%)
Query: 74 GEPLQVRQDNHGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRS 121
G+P + ++ GG G RGG R CY CG+ GHI+RDC S
Sbjct: 228 GKPGHISRECPEAGGSYGGSRGGGDRT----CYKCGEAGHISRDCPSS 271
>dbj|BAB12217.1| vasa homolog [Ciona savignyi]
Length = 770
Score = 138 bits (348), Expect = 1e-31
Identities = 75/199 (37%), Positives = 104/199 (51%), Gaps = 35/199 (17%)
Query: 82 DNHGGGGG-----GRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGG 136
D+ G GGG G GF + GC+ CG+ GH++R+C + GGGG
Sbjct: 80 DDTGFGGGFGSSSGGGFGDTRGSSRSKGCFKCGEEGHMSRECPQ------------GGGG 127
Query: 137 DRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRCGGVGHIARDCATPSSGG 196
R + C+ CG H +R+C + GGGG GGGG C++CG GH++R+C G
Sbjct: 128 SRGKGCFKCGEEGHMSRECPK-------GGGGGGGGGRGCFKCGEEGHMSRECPKGGDSG 180
Query: 197 GGGGA----CYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFGGGNRRFGSGGGGHDG 252
G + C+KCGE GH++R+C GG GG G G G +R GGG G
Sbjct: 181 FEGRSRSKGCFKCGEEGHMSRECPQGGG---GGRGSGCFKCGEEGHMSRECPQGGG---G 234
Query: 253 GKGT-CFNCGKAGHFARDC 270
G+G+ CF CG+ GH +R+C
Sbjct: 235 GRGSGCFKCGEEGHMSREC 253
Score = 118 bits (295), Expect = 2e-25
Identities = 71/196 (36%), Positives = 94/196 (47%), Gaps = 22/196 (11%)
Query: 88 GGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDRNDRNDRSGGG----GGGDRDRACY 143
G G GF G+ +GG G G D D SGGG G R + C+
Sbjct: 52 GFGSGF--GKSDDGGFGSKPNSGFGKSNFDDDTGFGGGFGSSSGGGFGDTRGSSRSKGCF 109
Query: 144 TCGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRCGGVGHIARDCATPSSGGGGGG-AC 202
CG H +R+C +GGG G G C++CG GH++R+C GGGGGG C
Sbjct: 110 KCGEEGHMSRECPQGGG---------GSRGKGCFKCGEEGHMSRECPKGGGGGGGGGRGC 160
Query: 203 YKCGEVGHIARDCSNEGGRFDGGNGRYDD--GNGRFGGGNRRFGSGGGGHDGGKGT-CFN 259
+KCGE GH++R+C G G R G G +R GGGG G+G+ CF
Sbjct: 161 FKCGEEGHMSRECPKGGDSGFEGRSRSKGCFKCGEEGHMSRECPQGGGG---GRGSGCFK 217
Query: 260 CGKAGHFARDCVEASG 275
CG+ GH +R+C + G
Sbjct: 218 CGEEGHMSRECPQGGG 233
Score = 94.4 bits (233), Expect = 3e-18
Identities = 56/177 (31%), Positives = 79/177 (43%), Gaps = 35/177 (19%)
Query: 39 RSEG-FRSLSEGDRVEFTIADGDNGKTKAVDVTGPKGEPLQVRQDNHGGGGGGRGFRGGE 97
RS+G F+ EG G + K G +G R+ GGGGGG
Sbjct: 104 RSKGCFKCGEEGHMSRECPQGGGGSRGKGCFKCGEEGH--MSRECPKGGGGGG------- 154
Query: 98 RRNGGGGCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMR 157
GG GC+ CG+ GH++R+C + G G R + C+ CG H +R+C +
Sbjct: 155 --GGGRGCFKCGEEGHMSRECPKGG-------DSGFEGRSRSKGCFKCGEEGHMSRECPQ 205
Query: 158 GGGNNNNGG----------------GGYGGGGTSCYRCGGVGHIARDCATPSSGGGG 198
GGG G GG GG G+ C++CG GH++R+C +SG GG
Sbjct: 206 GGGGGRGSGCFKCGEEGHMSRECPQGGGGGRGSGCFKCGEEGHMSRECPRNTSGEGG 262
Score = 45.4 bits (106), Expect = 0.002
Identities = 25/72 (34%), Positives = 39/72 (53%), Gaps = 15/72 (20%)
Query: 74 GEPLQVRQDNHGGGGGGRG---FRGGER--------RNGGGG----CYTCGDTGHIARDC 118
GE + ++ GGGGGRG F+ GE + GGGG C+ CG+ GH++R+C
Sbjct: 194 GEEGHMSRECPQGGGGGRGSGCFKCGEEGHMSRECPQGGGGGRGSGCFKCGEEGHMSREC 253
Query: 119 DRSDRNDRNDRS 130
R+ + ++S
Sbjct: 254 PRNTSGEGGEKS 265
>gb|AAP06183.1| similar to GenBank Accession Number M94390 HEXBP DNA binding
protein in Leishmania major [Schistosoma japonicum]
Length = 192
Score = 138 bits (347), Expect = 2e-31
Identities = 73/197 (37%), Positives = 92/197 (46%), Gaps = 53/197 (26%)
Query: 103 GGCYTCGDTGHIARDCDRSDRNDRNDRS-----GGGGGGDRDR------ACYTCGSFEHF 151
G C+ CG GH ARDC R R GGGGG DRD C+ CG +H+
Sbjct: 3 GECFKCGREGHFARDCQAQSRGGRGGGGGYRGRGGGGGRDRDNNDGRRDGCFNCGGLDHY 62
Query: 152 ARDCMRGGGN-NNNGGGGYGGGGT--SCYRCGGVGHIARDCATP----------SSGGGG 198
ARDC G+ GGGGYGG G+ C+ CGGVGH AR+C GGGG
Sbjct: 63 ARDCPNDRGHYGGGGGGGYGGYGSRDKCFNCGGVGHFARECTNDGQRGDSGYNNGGGGGG 122
Query: 199 GGACYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFGGGNRRFGSGGGGHDGGKGTCF 258
GG CY CG+ GH+ R+C + N R +D + C+
Sbjct: 123 GGRCYNCGQSGHVVRNCPS--------NNR---------------------NDMSEILCY 153
Query: 259 NCGKAGHFARDCVEASG 275
C K GH+A++C E+ G
Sbjct: 154 RCNKYGHYAKECTESGG 170
Score = 127 bits (318), Expect = 4e-28
Identities = 68/151 (45%), Positives = 82/151 (54%), Gaps = 22/151 (14%)
Query: 85 GGGGGGRGFRGG---ERRNGGG---GCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGG-- 136
GGGGG RG GG +R N G GC+ CG H ARDC NDR GGGGGG
Sbjct: 27 GGGGGYRGRGGGGGRDRDNNDGRRDGCFNCGGLDHYARDCP----NDRGHYGGGGGGGYG 82
Query: 137 ---DRDRACYTCGSFEHFARDC----MRGGGNNNNGGGGYGGGGTSCYRCGGVGHIARDC 189
RD+ C+ CG HFAR+C RG NNGGG GGGG CY CG GH+ R+C
Sbjct: 83 GYGSRDK-CFNCGGVGHFARECTNDGQRGDSGYNNGGG--GGGGGRCYNCGQSGHVVRNC 139
Query: 190 ATPSSGGGGGGACYKCGEVGHIARDCSNEGG 220
+ + CY+C + GH A++C+ GG
Sbjct: 140 PSNNRNDMSEILCYRCNKYGHYAKECTESGG 170
Score = 99.0 bits (245), Expect = 1e-19
Identities = 56/136 (41%), Positives = 67/136 (49%), Gaps = 17/136 (12%)
Query: 84 HGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDC-DRSDRNDRNDRSGGGGGGDRDRAC 142
H GGGGG G+ G R+ C+ CG GH AR+C + R D +GGGGGG C
Sbjct: 72 HYGGGGGGGYGGYGSRDK---CFNCGGVGHFARECTNDGQRGDSGYNNGGGGGG--GGRC 126
Query: 143 YTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRCGGVGHIARDCATPSSGGGGGGAC 202
Y CG H R+C NN N CYRC GH A++C + GG G C
Sbjct: 127 YNCGQSGHVVRNC---PSNNRN-----DMSEILCYRCNKYGHYAKEC---TESGGSGPQC 175
Query: 203 YKCGEVGHIARDCSNE 218
YKC GHIA C+ E
Sbjct: 176 YKCRGYGHIASRCNVE 191
Score = 80.9 bits (198), Expect = 4e-14
Identities = 37/110 (33%), Positives = 53/110 (47%), Gaps = 22/110 (20%)
Query: 80 RQDNHGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRD 139
R+ + G G G+ G GGG CY CG +GH+ R+C ++RND + +
Sbjct: 101 RECTNDGQRGDSGYNNGGGGGGGGRCYNCGQSGHVVRNCPSNNRNDMS-----------E 149
Query: 140 RACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRCGGVGHIARDC 189
CY C + H+A++C GG+ G CY+C G GHIA C
Sbjct: 150 ILCYRCNKYGHYAKECTESGGS-----------GPQCYKCRGYGHIASRC 188
>ref|XP_331315.1| hypothetical protein [Neurospora crassa] gi|28922111|gb|EAA31369.1|
hypothetical protein [Neurospora crassa]
Length = 183
Score = 137 bits (344), Expect = 4e-31
Identities = 74/182 (40%), Positives = 91/182 (49%), Gaps = 36/182 (19%)
Query: 101 GGGGCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGG 160
G C+TCG T H ARDC CY CG+ H +RDC G
Sbjct: 9 GTRACFTCGQTTHQARDCPNKGA----------------AKCYNCGNEGHMSRDCPEGPK 52
Query: 161 NNNNGGGGYGGGGTSCYRCGGVGHIARDCATPSSGGGGGGACYKCGEVGHIARDCSNEGG 220
+N +CYRCG GHI+RDC+ G G CYKCGEVGHIAR+CS G
Sbjct: 53 DN----------ARTCYRCGQTGHISRDCSQSGGGQSSGAECYKCGEVGHIARNCSKGGA 102
Query: 221 RFDGGNGRYDDGNGRFGGGNRR-FGSGGGGH------DGGKGTCFNCGKAGHFARDCVEA 273
+ GG G G FGG + + GG GH +G K C+NCG++GHF+RDC +
Sbjct: 103 SYGGGYQNSGYGGG-FGGPQKTCYSCGGIGHMSRDCVNGSK--CYNCGESGHFSRDCPKD 159
Query: 274 SG 275
SG
Sbjct: 160 SG 161
Score = 96.3 bits (238), Expect = 8e-19
Identities = 50/146 (34%), Positives = 69/146 (47%), Gaps = 31/146 (21%)
Query: 74 GEPLQVRQDNHGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSDRN----DRNDR 129
G+ + +D GGG ++ G CY CG+ GHIAR+C + + +N
Sbjct: 62 GQTGHISRDCSQSGGG---------QSSGAECYKCGEVGHIARNCSKGGASYGGGYQNSG 112
Query: 130 SGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTSCYRCGGVGHIARDC 189
GGG GG + + CY+CG H +RDC+ G+ CY CG GH +RDC
Sbjct: 113 YGGGFGGPQ-KTCYSCGGIGHMSRDCV---------------NGSKCYNCGESGHFSRDC 156
Query: 190 ATPSSGGGGGGACYKCGEVGHIARDC 215
P G G CYKC + GH+ C
Sbjct: 157 --PKDSGSGEKICYKCQQPGHVQSQC 180
>dbj|BAB13307.1| vasa-related protein CnVAS1 [Hydra magnipapillata]
Length = 797
Score = 136 bits (342), Expect = 7e-31
Identities = 88/241 (36%), Positives = 113/241 (46%), Gaps = 65/241 (26%)
Query: 82 DNHGGGGGGRGFRGGERRNGGGG--CYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRD 139
D GG G G GG NGGGG C+ CG GH++R+C GGGGGG R
Sbjct: 46 DTSVGGFGSSGGFGGSSFNGGGGRACHKCGKEGHMSRECP----------DGGGGGGGR- 94
Query: 140 RACYTCGSFEHFARDCMRGGGNNNN-----GGGGY--------GGGGTSCYRCGGVGHIA 186
AC+ C H +RDC +GG G G+ GGGG +C++C GH++
Sbjct: 95 -ACFKCKQEGHMSRDCPQGGSGGGRACHKCGKEGHMSRECPDGGGGGRACFKCKQEGHMS 153
Query: 187 RDCATPSSGGGGGGACYKCGEVGHIARDC---SNEGGRF---DGGNGRYDDGNGRFG-GG 239
+DC SGGGG C+KCG+ GH++R+C S GG F GG G + G FG G
Sbjct: 154 KDCPQ-GSGGGGSRTCHKCGKEGHMSRECPDGSGGGGGFGEKSGGGGFGEKSGGGFGASG 212
Query: 240 NRRFGSGGG-------------GHDGGKGT-----------------CFNCGKAGHFARD 269
FG+GGG G+ GG G C C ++GHFA+D
Sbjct: 213 GGGFGAGGGGFGTISTGSNSFEGNGGGFGDDAAGGGGFGASEKRDDGCRICKQSGHFAKD 272
Query: 270 C 270
C
Sbjct: 273 C 273
Score = 80.9 bits (198), Expect = 4e-14
Identities = 54/179 (30%), Positives = 70/179 (38%), Gaps = 69/179 (38%)
Query: 160 GNNNNGGGGYG-----------------------------------------GGGTSCYR 178
G +G GG GGG +C++
Sbjct: 14 GGFGSGAGGSSSFGKSFNSGGGFGSSSAGGFGDTSVGGFGSSGGFGGSSFNGGGGRACHK 73
Query: 179 CGGVGHIARDCATPSSGGGGGG-ACYKCGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFG 237
CG GH++R+C P GGGGGG AC+KC + GH++RDC G G GR G+ G
Sbjct: 74 CGKEGHMSREC--PDGGGGGGGRACFKCKQEGHMSRDCPQGG----SGGGRACHKCGKEG 127
Query: 238 GGNRRFGSGGGG---------------------HDGGKGTCFNCGKAGHFARDCVEASG 275
+R GGGG GG TC CGK GH +R+C + SG
Sbjct: 128 HMSRECPDGGGGGRACFKCKQEGHMSKDCPQGSGGGGSRTCHKCGKEGHMSRECPDGSG 186
Score = 58.2 bits (139), Expect = 3e-07
Identities = 54/212 (25%), Positives = 67/212 (31%), Gaps = 104/212 (49%)
Query: 73 KGEPLQVRQDNHGGGGGGR--------GFRGGERRNGGGG---CYTCGDTGHIARDCDRS 121
K E R GG GGGR G E +GGGG C+ C GH+++DC +
Sbjct: 100 KQEGHMSRDCPQGGSGGGRACHKCGKEGHMSRECPDGGGGGRACFKCKQEGHMSKDCPQ- 158
Query: 122 DRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDC---------------------MRGGG 160
G GGGG R C+ CG H +R+C GGG
Sbjct: 159 ---------GSGGGGSR--TCHKCGKEGHMSRECPDGSGGGGGFGEKSGGGGFGEKSGGG 207
Query: 161 NNNNGGGGY-----------------------------GGGG------------------ 173
+GGGG+ GGGG
Sbjct: 208 FGASGGGGFGAGGGGFGTISTGSNSFEGNGGGFGDDAAGGGGFGASEKRDDGCRICKQSG 267
Query: 174 -------------TSCYRCGGVGHIARDCATP 192
+C RCG GH A+DC P
Sbjct: 268 HFAKDCPDKKPRDDTCRRCGESGHFAKDCEAP 299
>gb|EAL20847.1| hypothetical protein CNBE2080 [Cryptococcus neoformans var.
neoformans B-3501A] gi|57227106|gb|AAW43565.1|
DNA-binding protein hexbp, putative [Cryptococcus
neoformans var. neoformans JEC21]
gi|58267432|ref|XP_570872.1| DNA-binding protein hexbp,
putative [Cryptococcus neoformans var. neoformans JEC21]
Length = 204
Score = 122 bits (306), Expect = 1e-26
Identities = 70/191 (36%), Positives = 91/191 (46%), Gaps = 62/191 (32%)
Query: 105 CYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMRGGGNNNN 164
CY CG +GH++R+C + +++ACYTCG H + C +G +
Sbjct: 30 CYNCGLSGHLSRECPQP----------------KNKACYTCGQEGHLSSACPQG-----S 68
Query: 165 GGGGYGG--GGTSCYRCGGVGHIARDCATPSS------------GGGGGGA------CYK 204
G GG+GG GG CYRCG GHIAR C GG GGGA CY
Sbjct: 69 GAGGFGGASGGGECYRCGKPGHIARMCPESGDAAAGGFGGAGGYGGFGGGAGFGNKSCYT 128
Query: 205 CGEVGHIARDCSNEGGRFDGGNGRYDDGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAG 264
CG VGHI+R+C + G +R FG GGGG GG C+NCG+ G
Sbjct: 129 CGGVGHISRECPS--------------------GASRGFGGGGGGF-GGPRKCYNCGQDG 167
Query: 265 HFARDCVEASG 275
H +R+C + G
Sbjct: 168 HISRECPQEQG 178
Score = 114 bits (286), Expect = 2e-24
Identities = 63/164 (38%), Positives = 73/164 (44%), Gaps = 19/164 (11%)
Query: 63 KTKAVDVTGPKGEPLQVRQDNHGGGGGGRGFRGGERRNGGGGCYTCGDTGHIARDCDRSD 122
K KA G +G G GG G +GGG CY CG GHIAR C S
Sbjct: 47 KNKACYTCGQEGHLSSACPQGSGAGGFGGA-------SGGGECYRCGKPGHIARMCPESG 99
Query: 123 RNDRNDRSG-------GGGGGDRDRACYTCGSFEHFARDCMRGGGNNNNGGGGYGGGGTS 175
G GGG G +++CYTCG H +R+C G GGGG GG
Sbjct: 100 DAAAGGFGGAGGYGGFGGGAGFGNKSCYTCGGVGHISRECPSGASRGFGGGGGGFGGPRK 159
Query: 176 CYRCGGVGHIARDCATPSSGGGGGGACYKCGEVGHIARDCSNEG 219
CY CG GHI+R+C G CY CG+ GHIA C G
Sbjct: 160 CYNCGQDGHISRECPQEQ-----GKTCYSCGQPGHIASACPGAG 198
Score = 50.1 bits (118), Expect = 7e-05
Identities = 33/96 (34%), Positives = 39/96 (40%), Gaps = 17/96 (17%)
Query: 195 GGGGGGACYKCGEVGHIARDCSNEGGR-----FDGGNGR----------YDDGNGRFGGG 239
G G +C+KCG+ GH+A C E G R Y G
Sbjct: 3 GAPRGSSCFKCGQQGHVAAACPAEAPTCYNCGLSGHLSRECPQPKNKACYTCGQEGHLSS 62
Query: 240 NRRFGSGGGGHDG--GKGTCFNCGKAGHFARDCVEA 273
GSG GG G G G C+ CGK GH AR C E+
Sbjct: 63 ACPQGSGAGGFGGASGGGECYRCGKPGHIARMCPES 98
>gb|AAB47542.1| nucleic acid binding protein [Trypanosoma equiperdum]
Length = 270
Score = 121 bits (303), Expect = 2e-26
Identities = 71/186 (38%), Positives = 89/186 (47%), Gaps = 27/186 (14%)
Query: 98 RRNGGGGCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDCMR 157
R GG C+ CG GH AR+C N G G DRACYTCG +H +RDC
Sbjct: 12 RAEGGNNCHRCGQPGHFARECP-------NVPPGAMG----DRACYTCGQPDHLSRDC-- 58
Query: 158 GGGNNNNGGGGYGGGGTSCYRCGGVGHIARDCATPSSGG------GGGGACYKCGEVGHI 211
+N G GGG +CY CG GH +R+C G GGG ACY C + GH
Sbjct: 59 ----PSNRGTAPMGGGRACYNCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCVQPGHF 114
Query: 212 ARDCSN-EGGRFDG---GNGRYDDGNGRFGGGNRRFGSGGGGHDGGKGTCFNCGKAGHFA 267
+R+C N GG G G GR G+ G +R + G + GG C+ C + GH A
Sbjct: 115 SRECPNMRGGPMGGAPMGGGRACYHCGQPGHFSRECPNMRGANMGGGRECYQCRQEGHIA 174
Query: 268 RDCVEA 273
+C A
Sbjct: 175 SECPNA 180
Score = 120 bits (300), Expect = 5e-26
Identities = 71/183 (38%), Positives = 89/183 (47%), Gaps = 26/183 (14%)
Query: 101 GGGGCYTCGDTGHIARDCDRSDRNDRNDRSGGGGGGDRDRACYTCGSFEHFARDC--MRG 158
G CYTCG H++RDC ++R GGG RACY CG HF+R+C MRG
Sbjct: 41 GDRACYTCGQPDHLSRDCP----SNRGTAPMGGG-----RACYNCGQPGHFSRECPNMRG 91
Query: 159 GGNNNNGGGGYGGGGTSCYRCGGVGHIARDCATPSSGG------GGGGACYKCGEVGHIA 212
G GG GGG +CY C GH +R+C G GGG ACY CG+ GH +
Sbjct: 92 GPM----GGAPMGGGRACYNCVQPGHFSRECPNMRGGPMGGAPMGGGRACYHCGQPGHFS 147
Query: 213 RDCSN-EGGRFDGGNGRY---DDGNGRFGGGNRRFGSGGGGHDGGKG-TCFNCGKAGHFA 267
R+C N G GG Y +G+ N + GG G G C+ CG+ GH +
Sbjct: 148 RECPNMRGANMGGGRECYQCRQEGHIASECPNAPDDAAAGGTAAGGGRACYKCGQPGHLS 207
Query: 268 RDC 270
R C
Sbjct: 208 RAC 210
Score = 99.8 bits (247), Expect = 8e-20
Identities = 56/133 (42%), Positives = 66/133 (49%), Gaps = 23/133 (17%)
Query: 92 GFRGGERRNGGGGCYTCGDTGHIARDCDRSDRNDRNDRSGGG--GGGDRDRACYTCGSFE 149
G GG GG CY C GH +R+C N R GG GGG RACY CG
Sbjct: 92 GPMGGAPMGGGRACYNCVQPGHFSRECP----NMRGGPMGGAPMGGG---RACYHCGQPG 144
Query: 150 HFARDCMRGGGNNNNGGGGYGGGGTSCYRCGGVGHIARDC-------ATPSSGGGGGGAC 202
HF+R+C G N GGG CY+C GHIA +C A + GGG AC
Sbjct: 145 HFSRECPNMRGANM-------GGGRECYQCRQEGHIASECPNAPDDAAAGGTAAGGGRAC 197
Query: 203 YKCGEVGHIARDC 215
YKCG+ GH++R C
Sbjct: 198 YKCGQPGHLSRAC 210
Score = 89.7 bits (221), Expect = 8e-17
Identities = 46/109 (42%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 172 GGTSCYRCGGVGHIARDCATPSSGGGGGGACYKCGEVGHIARDCSNEGGRFDGGNGR--Y 229
GG +C+RCG GH AR+C G G ACY CG+ H++RDC + G G GR Y
Sbjct: 15 GGNNCHRCGQPGHFARECPNVPPGAMGDRACYTCGQPDHLSRDCPSNRGTAPMGGGRACY 74
Query: 230 DDGN-GRFGG--GNRRFGSGGGGHDGGKGTCFNCGKAGHFARDCVEASG 275
+ G G F N R G GG GG C+NC + GHF+R+C G
Sbjct: 75 NCGQPGHFSRECPNMRGGPMGGAPMGGGRACYNCVQPGHFSRECPNMRG 123
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.317 0.145 0.476
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 669,751,900
Number of Sequences: 2540612
Number of extensions: 43154824
Number of successful extensions: 545409
Number of sequences better than 10.0: 11448
Number of HSP's better than 10.0 without gapping: 3391
Number of HSP's successfully gapped in prelim test: 8351
Number of HSP's that attempted gapping in prelim test: 229919
Number of HSP's gapped (non-prelim): 84074
length of query: 275
length of database: 863,360,394
effective HSP length: 126
effective length of query: 149
effective length of database: 543,243,282
effective search space: 80943249018
effective search space used: 80943249018
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 74 (33.1 bits)
Medicago: description of AC121233.14