BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC119419.1 + phase: 0 /partial
(107 letters)
Database: nr
2,540,612 sequences; 863,360,394 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAA80974.1| ribosomal protein S13 [Pisum sativum] gi|1173198... 209 2e-53
dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng] 208 3e-53
emb|CAB80768.1| putative ribosomal protein S13 [Arabidopsis thal... 207 4e-53
emb|CAB82681.1| ribosomal protein S13-like [Arabidopsis thaliana... 207 4e-53
gb|AAP21351.1| At4g00100 [Arabidopsis thaliana] gi|21593617|gb|A... 207 4e-53
gb|AAL91269.1| AT3g60770/T4C21_180 [Arabidopsis thaliana] gi|158... 207 4e-53
gb|AAK96445.1| AT3g60770/T4C21_180 [Arabidopsis thaliana] gi|141... 207 4e-53
gb|AAS47510.1| ribosomal protein S13 [Glycine max] gi|54039313|s... 207 7e-53
gb|AAT40507.1| cytoplasmic ribosomal protein S13 [Solanum demissum] 206 9e-53
gb|AAU82114.1| cytoplasmatic ribosomal protein S13 [Triticum aes... 184 5e-46
ref|XP_479793.1| putative 40S RIBOSOMAL PROTEIN S13 [Oryza sativ... 183 1e-45
ref|XP_479792.1| putative 40S RIBOSOMAL PROTEIN S13 [Oryza sativ... 183 1e-45
emb|CAA44311.1| cytoplasmatic ribosomal protein S13 [Zea mays] g... 182 1e-45
gb|EAA48691.1| hypothetical protein MG00349.4 [Magnaporthe grise... 181 4e-45
ref|XP_330225.1| hypothetical protein [Neurospora crassa] gi|289... 180 9e-45
ref|NP_569116.1| ribosomal protein S13 [Rattus norvegicus] gi|49... 179 1e-44
gb|AAH11192.1| Rps13 protein [Mus musculus] 179 1e-44
gb|EAL86942.1| cytosolic small ribosomal subunit S15, putative [... 179 1e-44
gb|AAX43326.1| ribosomal protein S13 [synthetic construct] 179 1e-44
ref|XP_584604.1| PREDICTED: similar to ribosomal protein S13 [Bo... 179 1e-44
>emb|CAA80974.1| ribosomal protein S13 [Pisum sativum] gi|1173198|sp|P46298|RS13_PEA
40S ribosomal protein S13
Length = 151
Score = 209 bits (531), Expect = 2e-53
Identities = 104/107 (97%), Positives = 106/107 (98%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
VDETICKFAKKGLTPSQIGVILRDSHGIAQVK+VTG+KILRILKAHGLAPEIPEDLYHLI
Sbjct: 33 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAVSIRKHLER RKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW
Sbjct: 93 KKAVSIRKHLERFRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 139
>dbj|BAA96366.1| cytoplasmic ribosomal protein S13 [Panax ginseng]
Length = 151
Score = 208 bits (529), Expect = 3e-53
Identities = 102/107 (95%), Positives = 106/107 (98%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
VD+ ICKFAKKGLTPSQIGVILRDSHGIAQVK+VTG+KILRILKAHGLAPEIPEDLYHLI
Sbjct: 33 VDDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW
Sbjct: 93 KKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 139
>emb|CAB80768.1| putative ribosomal protein S13 [Arabidopsis thaliana]
gi|3193323|gb|AAC19305.1| similar to ribosomal protein
S13 (Pfam; S15.hmm, score: 78.35); identical to
Arabidopsis 40S ribosomal protein S13 (fragment) (SW:
P49203A) except the first 32 amino acids are different
[Arabidopsis thaliana] gi|7440402|pir||T01338 ribosomal
protein S13, cytosolic - Arabidopsis thaliana
Length = 150
Score = 207 bits (528), Expect = 4e-53
Identities = 102/107 (95%), Positives = 106/107 (98%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
VDE+ICKFAKKGLTPSQIGVILRDSHGI QVK+VTG+KILRILKAHGLAPEIPEDLYHLI
Sbjct: 33 VDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW
Sbjct: 93 KKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 139
>emb|CAB82681.1| ribosomal protein S13-like [Arabidopsis thaliana]
gi|11276609|pir||T47888 ribosomal protein S13-like -
Arabidopsis thaliana
Length = 150
Score = 207 bits (528), Expect = 4e-53
Identities = 102/107 (95%), Positives = 106/107 (98%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
VDE+ICKFAKKGLTPSQIGVILRDSHGI QVK+VTG+KILRILKAHGLAPEIPEDLYHLI
Sbjct: 33 VDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW
Sbjct: 93 KKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 139
>gb|AAP21351.1| At4g00100 [Arabidopsis thaliana] gi|21593617|gb|AAM65584.1|
putative ribosomal protein S13 [Arabidopsis thaliana]
gi|18411224|ref|NP_567151.1| 40S ribosomal protein S13
(RPS13A) [Arabidopsis thaliana]
gi|15982874|gb|AAL09784.1| AT4g00100/F6N15_7
[Arabidopsis thaliana] gi|27808638|sp|P59224|RS13B_ARATH
40S ribosomal protein S13-2 gi|13877541|gb|AAK43848.1|
similar to ribosomal protein S13 [Arabidopsis thaliana]
gi|6521012|dbj|BAA88058.1| cytoplasmic ribosomal protein
S13 [Arabidopsis thaliana]
Length = 151
Score = 207 bits (528), Expect = 4e-53
Identities = 102/107 (95%), Positives = 106/107 (98%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
VDE+ICKFAKKGLTPSQIGVILRDSHGI QVK+VTG+KILRILKAHGLAPEIPEDLYHLI
Sbjct: 33 VDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW
Sbjct: 93 KKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 139
>gb|AAL91269.1| AT3g60770/T4C21_180 [Arabidopsis thaliana]
gi|15810101|gb|AAL06976.1| AT3g60770/T4C21_180
[Arabidopsis thaliana] gi|14190473|gb|AAK55717.1|
AT3g60770/T4C21_180 [Arabidopsis thaliana]
gi|27808637|sp|P59223|RS13A_ARATH 40S ribosomal protein
S13-1 gi|18411716|ref|NP_567104.1| 40S ribosomal protein
S13 (RPS13A) [Arabidopsis thaliana]
Length = 151
Score = 207 bits (528), Expect = 4e-53
Identities = 102/107 (95%), Positives = 106/107 (98%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
VDE+ICKFAKKGLTPSQIGVILRDSHGI QVK+VTG+KILRILKAHGLAPEIPEDLYHLI
Sbjct: 33 VDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW
Sbjct: 93 KKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 139
>gb|AAK96445.1| AT3g60770/T4C21_180 [Arabidopsis thaliana]
gi|14190367|gb|AAK55664.1| AT3g60770/T4C21_180
[Arabidopsis thaliana]
Length = 151
Score = 207 bits (528), Expect = 4e-53
Identities = 102/107 (95%), Positives = 106/107 (98%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
VDE+ICKFAKKGLTPSQIGVILRDSHGI QVK+VTG+KILRILKAHGLAPEIPEDLYHLI
Sbjct: 33 VDESICKFAKKGLTPSQIGVILRDSHGIPQVKSVTGSKILRILKAHGLAPEIPEDLYHLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW
Sbjct: 93 KKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 139
>gb|AAS47510.1| ribosomal protein S13 [Glycine max]
gi|54039313|sp|P62302|RS13_SOYBN 40S ribosomal protein
S13
Length = 151
Score = 207 bits (526), Expect = 7e-53
Identities = 102/107 (95%), Positives = 105/107 (97%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
V+E ICKFAKKGLTPSQIGVILRDSHGIAQV +VTG+KILRILKAHGLAPEIPEDLYHLI
Sbjct: 33 VEENICKFAKKGLTPSQIGVILRDSHGIAQVNSVTGSKILRILKAHGLAPEIPEDLYHLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW
Sbjct: 93 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 139
>gb|AAT40507.1| cytoplasmic ribosomal protein S13 [Solanum demissum]
Length = 151
Score = 206 bits (525), Expect = 9e-53
Identities = 101/107 (94%), Positives = 106/107 (98%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
V++ ICKFAKKGLTPSQIGVILRDSHGIAQVK+VTG+KILRILKAHGLAPEIPEDLYHLI
Sbjct: 33 VEDNICKFAKKGLTPSQIGVILRDSHGIAQVKSVTGSKILRILKAHGLAPEIPEDLYHLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW
Sbjct: 93 KKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 139
>gb|AAU82114.1| cytoplasmatic ribosomal protein S13 [Triticum aestivum]
Length = 151
Score = 184 bits (467), Expect = 5e-46
Identities = 92/107 (85%), Positives = 97/107 (89%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
VDE I K AKKG PSQIGV+LRD HGI VK+VTG+KILRILKAHGLAPEIPEDLY LI
Sbjct: 33 VDELITKAAKKGQMPSQIGVLLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP W
Sbjct: 93 KKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTW 139
>ref|XP_479793.1| putative 40S RIBOSOMAL PROTEIN S13 [Oryza sativa (japonica
cultivar-group)] gi|51979539|ref|XP_507561.1| PREDICTED
P0470F10.18 gene product [Oryza sativa (japonica
cultivar-group)] gi|51964630|ref|XP_507099.1| PREDICTED
P0470F10.18 gene product [Oryza sativa (japonica
cultivar-group)] gi|50725632|dbj|BAD33099.1| putative
40S RIBOSOMAL PROTEIN S13 [Oryza sativa (japonica
cultivar-group)]
Length = 151
Score = 183 bits (464), Expect = 1e-45
Identities = 91/107 (85%), Positives = 97/107 (90%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
V+E I K AKKG PSQIGV+LRD HGI VK+VTG+KILRILKAHGLAPEIPEDLY LI
Sbjct: 33 VEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP W
Sbjct: 93 KKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTW 139
>ref|XP_479792.1| putative 40S RIBOSOMAL PROTEIN S13 [Oryza sativa (japonica
cultivar-group)] gi|50725631|dbj|BAD33098.1| putative
40S RIBOSOMAL PROTEIN S13 [Oryza sativa (japonica
cultivar-group)]
Length = 156
Score = 183 bits (464), Expect = 1e-45
Identities = 91/107 (85%), Positives = 97/107 (90%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
V+E I K AKKG PSQIGV+LRD HGI VK+VTG+KILRILKAHGLAPEIPEDLY LI
Sbjct: 33 VEEMIMKAAKKGQMPSQIGVVLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP W
Sbjct: 93 KKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTW 139
>emb|CAA44311.1| cytoplasmatic ribosomal protein S13 [Zea mays]
gi|464705|sp|Q05761|RS13_MAIZE 40S ribosomal protein S13
Length = 151
Score = 182 bits (463), Expect = 1e-45
Identities = 91/107 (85%), Positives = 97/107 (90%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
V+E I K AKKG PSQIGV+LRD HGI VK+VTG+KILRILKAHGLAPEIPEDLY LI
Sbjct: 33 VEEMITKAAKKGQMPSQIGVLLRDQHGIPLVKSVTGSKILRILKAHGLAPEIPEDLYFLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV+IRKHLERNRKDKDSKFRLILVESRIHRLARYYK+TKKLPP W
Sbjct: 93 KKAVAIRKHLERNRKDKDSKFRLILVESRIHRLARYYKRTKKLPPTW 139
>gb|EAA48691.1| hypothetical protein MG00349.4 [Magnaporthe grisea 70-15]
gi|39975009|ref|XP_368895.1| hypothetical protein
MG00349.4 [Magnaporthe grisea 70-15]
Length = 151
Score = 181 bits (459), Expect = 4e-45
Identities = 89/107 (83%), Positives = 96/107 (89%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
V E ICK A+KG TPSQIGV+LRDSHGIAQVK VTGNKILRILK++GLAP+IPEDLY LI
Sbjct: 33 VVEQICKLARKGATPSQIGVVLRDSHGIAQVKIVTGNKILRILKSNGLAPDIPEDLYMLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAVS+RKHLERNRKDKDSKFRLIL+ESRIHRLARYYK LPP W
Sbjct: 93 KKAVSVRKHLERNRKDKDSKFRLILIESRIHRLARYYKTVGVLPPTW 139
>ref|XP_330225.1| hypothetical protein [Neurospora crassa] gi|28925804|gb|EAA34807.1|
hypothetical protein [Neurospora crassa]
Length = 151
Score = 180 bits (456), Expect = 9e-45
Identities = 88/107 (82%), Positives = 96/107 (89%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
V + ICK AKKG TPSQIGVILRDSHGIAQVK VTGNKILRILK++GLAP++PEDLY LI
Sbjct: 33 VVDQICKLAKKGATPSQIGVILRDSHGIAQVKVVTGNKILRILKSNGLAPDLPEDLYMLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV++RKHLERNRKDKDSKFRLIL+ESRIHRLARYYK LPP W
Sbjct: 93 KKAVAVRKHLERNRKDKDSKFRLILIESRIHRLARYYKTVGVLPPTW 139
>ref|NP_569116.1| ribosomal protein S13 [Rattus norvegicus]
gi|49169798|ref|NP_001001783.1| ribosomal protein S13
[Gallus gallus] gi|13386034|ref|NP_080809.1| ribosomal
protein S13 [Mus musculus] gi|58760415|gb|AAW82117.1|
ribosomal protein S13-like [Bos taurus]
gi|488417|emb|CAA55821.1| ribosomal protein S13 [Homo
sapiens] gi|57730|emb|CAA37458.1| unnamed protein
product [Rattus rattus] gi|60688092|gb|AAH90397.1|
Ribosomal protein S13 [Mus musculus]
gi|55635357|ref|XP_508306.1| PREDICTED: similar to
ribosomal protein S13 [Pan troglodytes]
gi|61359234|gb|AAX41687.1| ribosomal protein S13
[synthetic construct] gi|54261703|gb|AAH84724.1| Unknown
(protein for MGC:105267) [Rattus norvegicus]
gi|42542653|gb|AAH66322.1| Ribosomal protein S13 [Homo
sapiens] gi|13879581|gb|AAH06772.1| Ribosomal protein
S13 [Homo sapiens] gi|12653411|gb|AAH00475.1| Ribosomal
protein S13 [Homo sapiens] gi|20987260|gb|AAH29732.1|
Ribosomal protein S13 [Homo sapiens]
gi|48479076|gb|AAT44861.1| ribosomal protein S13 [Gallus
gallus] gi|1754633|dbj|BAA13528.1| ribosomal protein S13
[Homo sapiens] gi|54039312|sp|P62301|RS13_MOUSE 40S
ribosomal protein S13 gi|50403608|sp|P62277|RS13_HUMAN
40S ribosomal protein S13 gi|54039303|sp|P62278|RS13_RAT
40S ribosomal protein S13 gi|26345010|dbj|BAC36154.1|
unnamed protein product [Mus musculus]
gi|51316609|sp|Q6ITC7|RS13_CHICK 40S ribosomal protein
S13 gi|307391|gb|AAA60283.1| ribosomal protein S13
gi|12858545|dbj|BAB31354.1| unnamed protein product [Mus
musculus] gi|12849251|dbj|BAB28268.1| unnamed protein
product [Mus musculus] gi|4506685|ref|NP_001008.1|
ribosomal protein S13 [Homo sapiens]
Length = 151
Score = 179 bits (454), Expect = 1e-44
Identities = 87/107 (81%), Positives = 97/107 (90%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
V E I K AKKGLTPSQIGVILRDSHG+AQV+ VTGNKILRILK+ GLAP++PEDLYHLI
Sbjct: 33 VKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV++RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + LPP W
Sbjct: 93 KKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNW 139
>gb|AAH11192.1| Rps13 protein [Mus musculus]
Length = 140
Score = 179 bits (454), Expect = 1e-44
Identities = 87/107 (81%), Positives = 97/107 (90%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
V E I K AKKGLTPSQIGVILRDSHG+AQV+ VTGNKILRILK+ GLAP++PEDLYHLI
Sbjct: 33 VKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV++RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + LPP W
Sbjct: 93 KKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNW 139
>gb|EAL86942.1| cytosolic small ribosomal subunit S15, putative [Aspergillus
fumigatus Af293]
Length = 148
Score = 179 bits (454), Expect = 1e-44
Identities = 86/107 (80%), Positives = 96/107 (89%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
V + ICK A+KG TPSQIGV+LRDSHGIAQVK VTGNKILRILK++GLAPE+PEDLY LI
Sbjct: 30 VVDQICKLARKGATPSQIGVVLRDSHGIAQVKVVTGNKILRILKSNGLAPELPEDLYFLI 89
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV++RKHLERNRKDKDSKFRLIL+ESRIHRL+RYYK LPP W
Sbjct: 90 KKAVAVRKHLERNRKDKDSKFRLILIESRIHRLSRYYKSVGVLPPTW 136
>gb|AAX43326.1| ribosomal protein S13 [synthetic construct]
Length = 152
Score = 179 bits (454), Expect = 1e-44
Identities = 87/107 (81%), Positives = 97/107 (90%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
V E I K AKKGLTPSQIGVILRDSHG+AQV+ VTGNKILRILK+ GLAP++PEDLYHLI
Sbjct: 33 VKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV++RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + LPP W
Sbjct: 93 KKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNW 139
>ref|XP_584604.1| PREDICTED: similar to ribosomal protein S13 [Bos taurus]
Length = 151
Score = 179 bits (454), Expect = 1e-44
Identities = 87/107 (81%), Positives = 97/107 (90%)
Query: 1 VDETICKFAKKGLTPSQIGVILRDSHGIAQVKAVTGNKILRILKAHGLAPEIPEDLYHLI 60
V E I K AKKGLTPSQIGVILRDSHG+AQV+ VTGNKILRILK+ GLAP++PEDLYHLI
Sbjct: 33 VKEQIYKLAKKGLTPSQIGVILRDSHGVAQVRFVTGNKILRILKSKGLAPDLPEDLYHLI 92
Query: 61 KKAVSIRKHLERNRKDKDSKFRLILVESRIHRLARYYKKTKKLPPVW 107
KKAV++RKHLERNRKDKD+KFRLIL+ESRIHRLARYYK + LPP W
Sbjct: 93 KKAVAVRKHLERNRKDKDAKFRLILIESRIHRLARYYKTKRVLPPNW 139
Database: nr
Posted date: Jul 5, 2005 12:34 AM
Number of letters in database: 863,360,394
Number of sequences in database: 2,540,612
Lambda K H
0.322 0.139 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 171,736,312
Number of Sequences: 2540612
Number of extensions: 6050562
Number of successful extensions: 16839
Number of sequences better than 10.0: 156
Number of HSP's better than 10.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 16690
Number of HSP's gapped (non-prelim): 158
length of query: 107
length of database: 863,360,394
effective HSP length: 83
effective length of query: 24
effective length of database: 652,489,598
effective search space: 15659750352
effective search space used: 15659750352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 68 (30.8 bits)
Medicago: description of AC119419.1