BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145221.10 - phase: 0
(68 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g35940 hypothetical protein 99 4e-22
At3g31440 hypothetical protein 97 1e-21
At3g31980 hypothetical protein 97 2e-21
At3g42100 putative protein 96 3e-21
At3g13250 hypothetical protein 94 1e-20
At5g34960 putative protein 92 5e-20
At5g32630 putative protein 92 6e-20
At3g30560 hypothetical protein 89 5e-19
At2g07620 putative helicase 88 7e-19
At2g14470 pseudogene 79 3e-16
At4g03690 hypothetical protein 77 2e-15
At2g05080 putative helicase 73 2e-14
At3g51700 unknown protein 70 2e-13
At5g28780 putative protein 68 7e-13
At1g54430 hypothetical protein 68 1e-12
At3g30420 hypothetical protein 67 1e-12
At3g43350 putative protein 61 1e-10
At1g52960 hypothetical protein 61 1e-10
At5g37110 putative helicase 60 2e-10
At3g51690 putative protein 60 2e-10
>At1g35940 hypothetical protein
Length = 1678
Score = 99.0 bits (245), Expect = 4e-22
Identities = 45/68 (66%), Positives = 61/68 (89%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL+H G+YLP PVFSHGQL+V +S+VTS++ LKILI+D+DG+ +T+N+V
Sbjct: 1610 MTINKSQGQSLEHIGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGKLQKQTTNVV 1669
Query: 61 YEEVFQNV 68
++EVFQN+
Sbjct: 1670 FKEVFQNI 1677
>At3g31440 hypothetical protein
Length = 536
Score = 97.4 bits (241), Expect = 1e-21
Identities = 45/68 (66%), Positives = 61/68 (89%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL+H G+YLP PVFSHGQL+V +S+VTS++ LKILI+D++G+ +T+NIV
Sbjct: 468 MTINKSQGQSLEHVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKNGKLQKQTTNIV 527
Query: 61 YEEVFQNV 68
++EVFQN+
Sbjct: 528 FKEVFQNI 535
>At3g31980 hypothetical protein
Length = 1099
Score = 96.7 bits (239), Expect = 2e-21
Identities = 42/68 (61%), Positives = 58/68 (84%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSLK G+YLP PVFSHGQL+V +S+VTS++ LK+LI+D++G +T N+V
Sbjct: 1030 MTINKSQGQSLKEVGIYLPKPVFSHGQLYVALSRVTSKKGLKVLIVDKEGNTQSQTMNVV 1089
Query: 61 YEEVFQNV 68
++E+FQN+
Sbjct: 1090 FKEIFQNI 1097
>At3g42100 putative protein
Length = 1752
Score = 95.9 bits (237), Expect = 3e-21
Identities = 44/68 (64%), Positives = 59/68 (86%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL+ G+YLP PVFSHGQL+V +S+VTS++ LKILI+D+DG +T+N+V
Sbjct: 1684 MTINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGNMQKQTTNVV 1743
Query: 61 YEEVFQNV 68
++EVFQN+
Sbjct: 1744 FKEVFQNI 1751
>At3g13250 hypothetical protein
Length = 1419
Score = 94.0 bits (232), Expect = 1e-20
Identities = 43/68 (63%), Positives = 59/68 (86%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL+ G+YLP PVFSHGQL+V +S+VTS+ LKILI+D++G+ +T+N+V
Sbjct: 1352 MTINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKTGLKILILDKEGKIQKQTTNVV 1411
Query: 61 YEEVFQNV 68
++EVFQN+
Sbjct: 1412 FKEVFQNI 1419
>At5g34960 putative protein
Length = 1033
Score = 92.0 bits (227), Expect = 5e-20
Identities = 42/68 (61%), Positives = 58/68 (84%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTIN SQGQSL+H G+YLP VFSHGQL+V +S+VTS++ LK LI+D+DG+ +T+N+V
Sbjct: 965 MTINTSQGQSLEHVGLYLPKAVFSHGQLYVALSRVTSKKGLKFLILDKDGKLQKQTTNVV 1024
Query: 61 YEEVFQNV 68
++EVFQN+
Sbjct: 1025 FKEVFQNI 1032
>At5g32630 putative protein
Length = 856
Score = 91.7 bits (226), Expect = 6e-20
Identities = 42/68 (61%), Positives = 58/68 (84%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL+ G+YLP VFSHGQL+V +S+VTS+ LKILI+D+DG+ +T+N+V
Sbjct: 788 MTINKSQGQSLEQAGLYLPKLVFSHGQLYVALSRVTSKSGLKILILDKDGDIQKQTTNVV 847
Query: 61 YEEVFQNV 68
++E+FQN+
Sbjct: 848 FKELFQNI 855
>At3g30560 hypothetical protein
Length = 1473
Score = 88.6 bits (218), Expect = 5e-19
Identities = 40/68 (58%), Positives = 56/68 (81%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQSL + G+YLP PVFSHGQL+V +S+V S+ LK+LI D G+ +ET+N+V
Sbjct: 1406 MTINKSQGQSLGNVGIYLPKPVFSHGQLYVAMSRVKSKGGLKVLITDSKGKQKNETTNVV 1465
Query: 61 YEEVFQNV 68
++E+F+N+
Sbjct: 1466 FKEIFRNL 1473
>At2g07620 putative helicase
Length = 1241
Score = 88.2 bits (217), Expect = 7e-19
Identities = 39/68 (57%), Positives = 55/68 (80%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
M I KSQGQSLK +YLP PVFSHGQL+V +S+VTS++ LK+LI+D++G +T N+V
Sbjct: 1172 MRIKKSQGQSLKEVEIYLPRPVFSHGQLYVALSRVTSKKGLKVLIVDKEGNTQSQTMNVV 1231
Query: 61 YEEVFQNV 68
++E+FQN+
Sbjct: 1232 FKEIFQNL 1239
>At2g14470 pseudogene
Length = 1265
Score = 79.3 bits (194), Expect = 3e-16
Identities = 36/51 (70%), Positives = 47/51 (91%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGE 51
MTINKS+GQSL+H G+YLP PVFSHGQL+V +S+VTS++ LKILI+D+DG+
Sbjct: 1214 MTINKSEGQSLEHVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILDKDGK 1264
>At4g03690 hypothetical protein
Length = 570
Score = 76.6 bits (187), Expect = 2e-15
Identities = 36/68 (52%), Positives = 51/68 (74%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
M INKSQ QSL + G+ L PVFSHGQL+V +S+V S+ LK+LI D G+ ET+N++
Sbjct: 502 MMINKSQRQSLANVGINLLKPVFSHGQLYVAMSRVKSKARLKVLITDSKGKQKKETTNVI 561
Query: 61 YEEVFQNV 68
++E+FQN+
Sbjct: 562 FKEIFQNL 569
>At2g05080 putative helicase
Length = 1219
Score = 73.2 bits (178), Expect = 2e-14
Identities = 33/56 (58%), Positives = 45/56 (79%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDET 56
MTINKSQGQSLK G++LP P FSH QL+V +S+VTS+ LKILI++++G+ +T
Sbjct: 1131 MTINKSQGQSLKRVGIFLPRPCFSHSQLYVAISRVTSKSGLKILIVNDEGKPQKQT 1186
>At3g51700 unknown protein
Length = 344
Score = 70.1 bits (170), Expect = 2e-13
Identities = 34/66 (51%), Positives = 49/66 (73%), Gaps = 1/66 (1%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGE-DTDETSNI 59
MTI++SQ Q+L G+YLP + HGQ +V +SKV SR LK+LI D+DG+ D +ET N+
Sbjct: 267 MTIDESQRQTLSKVGIYLPRQLLFHGQRYVAISKVKSRAGLKVLITDKDGKPDQEETKNV 326
Query: 60 VYEEVF 65
V++E+F
Sbjct: 327 VFKELF 332
>At5g28780 putative protein
Length = 337
Score = 68.2 bits (165), Expect = 7e-13
Identities = 35/68 (51%), Positives = 48/68 (70%), Gaps = 2/68 (2%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTI K+QGQSLK D +YLP PVFSH QL+V +S+VTS + + I+ D + DE NIV
Sbjct: 265 MTIIKNQGQSLKSDVLYLPNPVFSHVQLYVALSRVTSP--IGLTILHGDDQKNDEVKNIV 322
Query: 61 YEEVFQNV 68
Y+E + ++
Sbjct: 323 YKEFYNDL 330
>At1g54430 hypothetical protein
Length = 1639
Score = 67.8 bits (164), Expect = 1e-12
Identities = 37/68 (54%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MTINKSQGQ+L +YLP PVFSHGQL+V +S+VTS + L +L + E T NIV
Sbjct: 1565 MTINKSQGQTLNRVALYLPKPVFSHGQLYVALSRVTSPKGLTVLDTSKKKEGKYVT-NIV 1623
Query: 61 YEEVFQNV 68
Y EVF +
Sbjct: 1624 YREVFNGL 1631
>At3g30420 hypothetical protein
Length = 837
Score = 67.4 bits (163), Expect = 1e-12
Identities = 36/68 (52%), Positives = 46/68 (66%), Gaps = 1/68 (1%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTDETSNIV 60
MT+NKSQGQ+L +YLP PVFSHGQL+V +S+VTS + L +L + E T NIV
Sbjct: 763 MTVNKSQGQTLNRVALYLPKPVFSHGQLYVALSRVTSPKGLTVLDTSKKKEGKYVT-NIV 821
Query: 61 YEEVFQNV 68
Y EVF +
Sbjct: 822 YREVFNGL 829
>At3g43350 putative protein
Length = 830
Score = 60.8 bits (146), Expect = 1e-10
Identities = 28/42 (66%), Positives = 35/42 (82%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLK 42
MTINKSQGQ+L+ G+YLP PVFSHGQL+V +S+VTS+ K
Sbjct: 787 MTINKSQGQTLESVGLYLPRPVFSHGQLYVAISRVTSKTGTK 828
Score = 60.5 bits (145), Expect = 2e-10
Identities = 27/38 (71%), Positives = 34/38 (89%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSR 38
MTINKSQGQ+L+ G+YLP PVFSHGQL+V +S+VTS+
Sbjct: 671 MTINKSQGQTLESVGLYLPRPVFSHGQLYVAISRVTSK 708
Score = 60.5 bits (145), Expect = 2e-10
Identities = 27/38 (71%), Positives = 34/38 (89%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSR 38
MTINKSQGQ+L+ G+YLP PVFSHGQL+V +S+VTS+
Sbjct: 555 MTINKSQGQTLESVGLYLPRPVFSHGQLYVAISRVTSK 592
>At1g52960 hypothetical protein
Length = 924
Score = 60.8 bits (146), Expect = 1e-10
Identities = 28/42 (66%), Positives = 35/42 (82%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLK 42
MTINKSQGQ+L+ G+YLP PVFSHGQL+V +S+VTS+ K
Sbjct: 881 MTINKSQGQTLESVGLYLPRPVFSHGQLYVAISRVTSKTGTK 922
>At5g37110 putative helicase
Length = 1307
Score = 60.5 bits (145), Expect = 2e-10
Identities = 29/43 (67%), Positives = 35/43 (80%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKI 43
MTINKSQGQSLK G++L P FSHGQL+V +S+VTS+ LKI
Sbjct: 1250 MTINKSQGQSLKRVGIFLLRPCFSHGQLYVAISRVTSKTRLKI 1292
>At3g51690 putative protein
Length = 374
Score = 60.1 bits (144), Expect = 2e-10
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHG-QLHVVVSKVTSREWLKILIIDEDGEDTDETSNI 59
MTI++SQ +L G+YLP VFSHG Q+ V +SKV SR LK+LI D+DG +E N
Sbjct: 239 MTIDESQVHTLSKVGLYLPRQVFSHGRQMFVAISKVKSRAGLKVLITDKDGNPQEEAKNY 298
Query: 60 VYEEVF 65
+ F
Sbjct: 299 PFTLAF 304
Score = 50.4 bits (119), Expect = 2e-07
Identities = 27/69 (39%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 1 MTINKSQGQSLKHDGVYLPTPVFSHGQLHVVVSKVTSREWLKILIIDEDGEDTD-ETSNI 59
MTI++S+GQ+ G+YLP VF GQ ++ +SKV + L +I E+ E + E N+
Sbjct: 306 MTIDQSRGQTFSKVGLYLPKQVFFPGQRYLAISKVKAGTGLTQFLIAEEAEKSQVEAENV 365
Query: 60 VYEEVFQNV 68
V +++F NV
Sbjct: 366 VLKKLFWNV 374
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.314 0.133 0.377
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,580,642
Number of Sequences: 26719
Number of extensions: 54125
Number of successful extensions: 150
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 117
Number of HSP's gapped (non-prelim): 32
length of query: 68
length of database: 11,318,596
effective HSP length: 44
effective length of query: 24
effective length of database: 10,142,960
effective search space: 243431040
effective search space used: 243431040
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 52 (24.6 bits)
Medicago: description of AC145221.10